ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf3d24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK063660: 37 0.005
2AK119711:Os03g0700200 37 0.005
3AK108864: 33 0.10
4AK102329:Os07g0538000 32 0.29
5Os07g0539700:Os07g0539700 30 0.65
6AK101247:Os09g0441900 30 0.65
7AK107676:Os09g0409000 29 1.5
8AK108077:Os04g0410400 29 1.9
9Os04g0400600:Os04g0400600 28 2.5
10AK066260:Os11g0685400 28 2.5
11Os08g0244500:Os08g0244500 28 3.2
12AK108945: 28 3.2
13AK066237:Os07g0539300 28 3.2
14AK107697:Os03g0699800 28 4.2
15AK098943:Os07g0539900 28 4.2
16AK071889:Os07g0539900 28 4.2
17Os05g0353600:Os05g0353600 27 5.5
18AK062503:Os07g0290200 27 5.5
19Os04g0465300:Os04g0465300 27 7.2
20AK068895:Os09g0347300 27 7.2
21AK110836:Os04g0419900 27 9.4 
>AK063660: |
          Length = 97
 Score = 37.4 bits (85), Expect = 0.005
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +1

Query: 121 AATECEDCLGACVAICIAYA-ETSCSGIC--TVTPLACQACKDAALIQCGGTCYGGCTLP 291
           A   C  C  AC   C  Y  ++SCS  C        C++C DA  ++C   C   C + 
Sbjct: 34  AQVPCSKCDHACKKSCKGYGRDSSCSLPCGDPSNKAGCESCLDAYYLKCLNYCGQSCRVT 93

Query: 292 C*SG 303
           C SG
Sbjct: 94  CTSG 97



 Score = 29.3 bits (64), Expect = 1.5
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +1

Query: 109 GQPVAATECEDCLGACVAICIAYAETSCSGICT 207
           G P     CE CL A    C+ Y   SC   CT
Sbjct: 63  GDPSNKAGCESCLDAYYLKCLNYCGQSCRVTCT 95
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>AK119711:Os03g0700200 |
          Length = 97

 Score = 37.4 bits (85), Expect = 0.005
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +1

Query: 121 AATECEDCLGACVAICIAYA-ETSCSGIC--TVTPLACQACKDAALIQCGGTCYGGCTLP 291
           A   C  C  AC   C  Y  ++SCS  C        C++C DA  ++C   C   C + 
Sbjct: 34  AQVPCSKCDHACKKSCKGYGRDSSCSLPCGDPSNKAGCESCLDAYYLKCLNYCGQSCRVT 93

Query: 292 C*SG 303
           C SG
Sbjct: 94  CTSG 97



 Score = 29.3 bits (64), Expect = 1.5
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +1

Query: 109 GQPVAATECEDCLGACVAICIAYAETSCSGICT 207
           G P     CE CL A    C+ Y   SC   CT
Sbjct: 63  GDPSNKAGCESCLDAYYLKCLNYCGQSCRVTCT 95
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>AK108864: |
          Length = 72

 Score = 33.1 bits (74), Expect = 0.10
 Identities = 13/50 (26%), Positives = 19/50 (38%)
 Frame = +1

Query: 133 CEDCLGACVAICIAYAETSCSGICTVTPLACQACKDAALIQCGGTCYGGC 282
           C  C+  CV +C+      C  +C       +AC  A +  C   C   C
Sbjct: 20  CVVCVCVCVCVCVCVCVCVCVCVCACVRACVRACVRACVRACVRACVRAC 69



 Score = 32.7 bits (73), Expect = 0.13
 Identities = 13/51 (25%), Positives = 18/51 (35%)
 Frame = +1

Query: 142 CLGACVAICIAYAETSCSGICTVTPLACQACKDAALIQCGGTCYGGCTLPC 294
           C   CV +C+      C  +C       +AC  A +  C   C   C   C
Sbjct: 19  CCVVCVCVCVCVCVCVCVCVCVCVCACVRACVRACVRACVRACVRACVRAC 69



 Score = 29.6 bits (65), Expect = 1.1
 Identities = 12/48 (25%), Positives = 17/48 (35%)
 Frame = +1

Query: 151 ACVAICIAYAETSCSGICTVTPLACQACKDAALIQCGGTCYGGCTLPC 294
           AC  +C+      C  +C    +   AC  A +  C   C   C   C
Sbjct: 18  ACCVVCVCVCVCVCVCVCVCVCVCVCACVRACVRACVRACVRACVRAC 65
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>AK102329:Os07g0538000 |
          Length = 558

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 166 CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCY 273
           C+A AE     +      AC +C D + IQ GG C+
Sbjct: 464 CVANAEVGDMRLQAALDYACSSCADCSAIQPGGRCF 499
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>Os07g0539700:Os07g0539700 |
          Length = 924

 Score = 30.4 bits (67), Expect = 0.65
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 175 YAETSCSGICTVTPLACQACKDAALIQCGGTCYGGCTL 288
           YA   C G   V   AC+AC  AA +   G C GG +L
Sbjct: 86  YALALCRG--DVNASACRACVAAAFVDAKGVCPGGISL 121
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>AK101247:Os09g0441900 |
          Length = 444

 Score = 30.4 bits (67), Expect = 0.65
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 11/69 (15%)
 Frame = +1

Query: 121 AATECEDCLGACVAICIAYAETSCSGIC-----------TVTPLACQACKDAALIQCGGT 267
           +  +C+   G+C   C +  + SC+G C           + +   C +C +     C G 
Sbjct: 298 SCAQCKPDCGSCSTNCCS-CKPSCNGCCGEQCCRCADCFSCSCPRCSSCFNIFKCSCAGC 356

Query: 268 CYGGCTLPC 294
           C   C  PC
Sbjct: 357 CSSLCKCPC 365
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>AK107676:Os09g0409000 |
          Length = 126

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 9/48 (18%)
 Frame = +1

Query: 196 GICTVTPLACQACKDAALIQCGGTC---------YGGCTLPC*SGRLC 312
           G  T+ P  CQ C    L++C GTC         +  C L C   +LC
Sbjct: 79  GAATICPSNCQKC----LVKCAGTCVADIVSPPTFVACFLKCAVVKLC 122
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>AK108077:Os04g0410400 |
          Length = 355

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
 Frame = +1

Query: 157 VAICIAYAETSCSGICTVTPLAC-QACKDAALIQCGGTCYGGCT-----LPC*SGRLCPG 318
           VA C     T+    CTV P AC + C+D   + C  TC   C        C   R   G
Sbjct: 53  VASCYNQNNTASGPDCTVEPRACPRGCRDMCYVHC-PTCKLVCLCELTGTECYDPRFVGG 111

Query: 319 AGRKLVAYLR 348
            G K + + R
Sbjct: 112 DGNKFLFHGR 121
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>Os04g0400600:Os04g0400600 |
          Length = 225

 Score = 28.5 bits (62), Expect = 2.5
 Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 11/53 (20%)
 Frame = +1

Query: 190 CSGICTVTPLACQACKDAALIQCGGTCYGG-----------CTLPC*SGRLCP 315
           C G C   P  C+   D     CGG C GG           C  PC S   CP
Sbjct: 150 CCGGCVPPPPRCKCGVDG----CGGGCSGGHGGECGGGGGGCKKPCCSPPPCP 198
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>AK066260:Os11g0685400 |
          Length = 227

 Score = 28.5 bits (62), Expect = 2.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 21  STRTTQFINGFISQGGRRRSRLHRACPEHGPTS 119
           S+R  +   G  S+GGRR S  HR  P+  P S
Sbjct: 43  SSRCCRCHRGHSSRGGRRHSHSHRQTPQTPPPS 75
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>Os08g0244500:Os08g0244500 |
          Length = 577

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 166 CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCY 273
           C+A +E   + +      AC +C D + IQ G  C+
Sbjct: 468 CVAKSEVGDARLQNALDYACGSCADCSAIQPGAQCF 503



 Score = 26.9 bits (58), Expect = 7.2
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +1

Query: 148 GAC---VAICIAYAETSCSGICTVTPLACQACKDAALIQCGGTCYGGCTL 288
           GAC    + C+A A+   + + +    AC    D + IQ G  C+   TL
Sbjct: 373 GACPTKTSWCVARADVGSAALQSALDFACGNGADCSAIQQGSVCFEPNTL 422
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>AK108945: |
          Length = 321

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 220 ACQACKDAALIQCGGTCYGGCTLPC*SGRLCPGAG 324
           A  +C      QCGG  Y GCT  C +G  C   G
Sbjct: 281 AVPSCTVPRYGQCGGKTYTGCTF-CDAGLTCSSGG 314
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>AK066237:Os07g0539300 |
          Length = 577

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 166 CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCY 273
           C+A +E   + +      AC +C D + IQ G  C+
Sbjct: 469 CVAKSEVGDAQLQNALDYACGSCADCSAIQPGARCF 504
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>AK107697:Os03g0699800 |
          Length = 104

 Score = 27.7 bits (60), Expect = 4.2
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 109 GQPVAATECEDCLGACVAICIAYAETSCSGIC 204
           G P     C+ CL A  + C+ Y   +C  +C
Sbjct: 71  GDPSNKAGCKSCLQAYYSKCLNYCGQACRAVC 102
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>AK098943:Os07g0539900 |
          Length = 602

 Score = 27.7 bits (60), Expect = 4.2
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 166 CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCY 273
           CIA  E   + +      AC +C D + IQ G  C+
Sbjct: 515 CIAKPEVGDTRLQNALDYACGSCADCSAIQRGAQCF 550
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>AK071889:Os07g0539900 |
          Length = 602

 Score = 27.7 bits (60), Expect = 4.2
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 166 CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCY 273
           CIA  E   + +      AC +C D + IQ G  C+
Sbjct: 515 CIAKPEVGDTRLQNALDYACGSCADCSAIQRGAQCF 550
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>Os05g0353600:Os05g0353600 |
          Length = 365

 Score = 27.3 bits (59), Expect = 5.5
 Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 6/59 (10%)
 Frame = +1

Query: 121 AATECEDCLGACVAICIAYAETSCSGIC------TVTPLACQACKDAALIQCGGTCYGG 279
           AAT C  C G     C      +C G        T     C AC +  L++C   C GG
Sbjct: 312 AATPCASCGGTRFVPC-----GTCDGSHRRYSEKTGGFRVCTACNENGLVRCAACCSGG 365
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>AK062503:Os07g0290200 |
          Length = 104

 Score = 27.3 bits (59), Expect = 5.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 157 VAICIAYAETSCSGICTVTPLACQACKDAALIQ 255
           VA+ +A +     GIC ++    QACK AA ++
Sbjct: 12  VALVLAASAGLAHGICNLSDAGLQACKPAAAVR 44
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>Os04g0465300:Os04g0465300 |
          Length = 105

 Score = 26.9 bits (58), Expect = 7.2
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
 Frame = +1

Query: 136 EDCLGACVAICIAYA-ETSCSGICTVTPLACQACKDAALIQCG-----GTCY 273
           +DC+GAC A C  ++ +  CS  C      C AC+       G     G CY
Sbjct: 44  KDCVGACDARCSEHSHKKRCSRSCLT---CCSACRCVPAGTAGNRETCGRCY 92
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>AK068895:Os09g0347300 |
          Length = 598

 Score = 26.9 bits (58), Expect = 7.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 163 LQHKRLDNLRILWLPLVGPCSGQARCKRLRRRPP*EMKPLM 41
           L H     L + W+ L+  CS +   + +RR PP  ++ LM
Sbjct: 148 LLHNWFSQLDVEWVLLLHTCSEEEEDEHVRRPPPLPVEDLM 188
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>AK110836:Os04g0419900 |
          Length = 781

 Score = 26.6 bits (57), Expect = 9.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 121 AATECEDCLGACVAICIAYAETSCSGICTV 210
           AAT  ++C  AC++ C   A +   G C+V
Sbjct: 363 AATSADECAAACLSSCSCTAYSYGEGGCSV 392


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,463,922
Number of extensions: 325222
Number of successful extensions: 777
Number of sequences better than 10.0: 21
Number of HSP's gapped: 772
Number of HSP's successfully gapped: 26
Length of query: 165
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 72
Effective length of database: 11,676,042
Effective search space: 840675024
Effective search space used: 840675024
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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