Clone Information

BLAST Search Result

Clone Name	FLbaf3d24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOC_Os09g11210:12009.t00911:unspliced-genomic hypothetical p...	46	2e-04
2	LOC_Os07g35350:12007.t03210:unspliced-genomic hydrolase, hyd...	35	0.37
3	LOC_Os06g45690:12006.t04257:unspliced-genomic symbiosis-rela...	35	0.37
4	LOC_Os04g40780:12004.t03639:unspliced-genomic F-box domain c...	35	0.51
5	LOC_Os12g42850:12012.t03958:unspliced-genomic high-affinity ...	34	0.70
6	LOC_Os09g19190:12009.t01654:unspliced-genomic retrotransposo...	34	0.70
7	LOC_Os08g45080:12008.t04229:unspliced-genomic expressed protein	30	1.5
8	LOC_Os03g49300:12003.t04281:unspliced-genomic expressed protein	33	1.8
9	LOC_Os02g38210:12002.t03459:unspliced-genomic elongation fac...	33	1.8
10	LOC_Os12g26960:12012.t02409:unspliced-genomic expressed protein	31	2.4
11	LOC_Os10g06910:12010.t00555:unspliced-genomic conserved hypo...	32	2.5
12	LOC_Os03g49310:12003.t04282:unspliced-genomic expressed protein	32	2.5
13	LOC_Os02g06420:12002.t00540:unspliced-genomic conserved hypo...	27	3.1
14	LOC_Os03g30200:12003.t02631:unspliced-genomic mitochondrial ...	28	3.2
15	LOC_Os01g62400:12001.t05615:unspliced-genomic hypothetical p...	26	3.4
16	LOC_Os11g32940:12011.t02890:unspliced-genomic F-box domain c...	32	3.4
17	LOC_Os02g57440:12002.t05316:unspliced-genomic protein kinase...	32	3.4
18	LOC_Os06g09060:12006.t00785:unspliced-genomic retrotransposo...	31	4.7
19	LOC_Os04g10434:12004.t00877:unspliced-genomic glutamyl-tRNA,...	31	4.7
20	LOC_Os01g72720:12001.t06559:unspliced-genomic hypothetical p...	31	4.7
21	LOC_Os02g26160:12002.t02310:unspliced-genomic carbohydrate b...	29	5.2
22	LOC_Os04g47190:12004.t04246:unspliced-genomic branched-chain...	25	5.8
23	LOC_Os10g25450:12010.t01963:unspliced-genomic subtilisin-lik...	31	6.5
24	LOC_Os10g03669:12010.t003606:unspliced-genomic expressed pro...	31	6.5
25	LOC_Os08g14700:12008.t01345:unspliced-genomic glucan endo-1,...	31	6.5
26	LOC_Os07g38050:12007.t03473:unspliced-genomic expressed protein	31	6.5
27	LOC_Os07g35540:12007.t03229:unspliced-genomic protein kinase...	31	6.5
28	LOC_Os07g35510:12007.t03226:unspliced-genomic glycosyl hydro...	31	6.5
29	LOC_Os07g28640:12007.t02554:unspliced-genomic hypothetical p...	31	6.5
30	LOC_Os05g02480:12005.t00147:unspliced-genomic expressed protein	31	6.5
31	LOC_Os01g59760:12001.t05363:unspliced-genomic bZIP transcrip...	31	6.5
32	LOC_Os11g08060:12011.t00697:unspliced-genomic retrotransposo...	27	7.3
33	LOC_Os12g13674:12012.t004170:unspliced-genomic expressed pro...	30	8.9
34	LOC_Os11g28230:12011.t02436:unspliced-genomic retrotransposo...	30	8.9
35	LOC_Os10g08100:12010.t00634:unspliced-genomic retrotransposo...	30	8.9
36	LOC_Os07g47860:12007.t04420:unspliced-genomic ATP binding pr...	30	8.9
37	LOC_Os07g35560:12007.t03231:unspliced-genomic hydrolase, hyd...	30	8.9
38	LOC_Os05g25490:12005.t02205:unspliced-genomic 1-aminocyclopr...	30	8.9
39	LOC_Os03g49270:12003.t04278:unspliced-genomic expressed protein	30	8.9
40	LOC_Os03g17250:12003.t01504:unspliced-genomic protein bindin...	30	8.9
41	LOC_Os03g08600:12003.t00717:unspliced-genomic transferase, t...	30	8.9
42	LOC_Os02g34990:12002.t03137:unspliced-genomic amino acid bin...	30	8.9
43	LOC_Os01g64870:12001.t05853:unspliced-genomic expressed protein	30	8.9
44	LOC_Os01g09440:12001.t00822:unspliced-genomic conserved hypo...	25	9.0

>LOC_Os09g11210:12009.t00911:unspliced-genomic hypothetical protein|
          Length = 475
 Score = 46.0 bits (94), Expect = 2e-04
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1 / +1

                                                      
Query: 166 CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCYGGCTLPC 294
           C   A  +CS  C++TP  C  C+  +  QC   CY GC   C
Sbjct: 148 CYNNAINTCSSNCSITPQYCDQCRRESNQQCQNYCYNGCLYGC 276

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>LOC_Os07g35350:12007.t03210:unspliced-genomic hydrolase, hydrolyzing O-glycosyl compounds, putative, expressed|
          Length = 2319

 Score = 35.0 bits (70), Expect = 0.37
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1 / +3

                                                
Query: 166  CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCY 273
            C+A AE     +      AC +C D + IQ GG C+
Sbjct: 1701 CVANAEVGDMRLQAALDYACSSCADCSAIQPGGRCF 1808

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>LOC_Os06g45690:12006.t04257:unspliced-genomic symbiosis-related disease resistance protein, putative, expressed|
          Length = 4303

 Score = 35.0 bits (70), Expect = 0.37
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3 / +2

                                            
Query: 186  CFSVGDANCNTSA*TIFAFCGCHWLAHVQDKH 91
            C  V + N NTS+  I A    HWL HV   H
Sbjct: 3410 CLEVSEINANTSSGPINAVLQLHWLKHVSSFH 3505

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>LOC_Os04g40780:12004.t03639:unspliced-genomic F-box domain containing protein|
          Length = 1807

 Score = 34.5 bits (69), Expect = 0.51
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +1 / -1

                                                    
Query: 154 CVAICIAYAETSCSGICTVTPLACQACKDAALIQCGGTCYG 276
           C   C   A T+  G C   P AC AC+      C   C G
Sbjct: 127 CWGACRGRASTASRGRCISRPPACPACRGCRARHCRADCSG 5

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>LOC_Os12g42850:12012.t03958:unspliced-genomic high-affinity cationic amino acid transporter 1, putative, expressed|
          Length = 5045

 Score = 34.1 bits (68), Expect = 0.70
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1 / +3

                                           
Query: 142  CLGACVAICIAYAETSCSGICTVTPLACQAC 234
            C GAC A    +   S SG CT++ L C+AC
Sbjct: 1218 CSGACWAGIDTFISDSWSGSCTLSFLLCRAC 1310

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>LOC_Os09g19190:12009.t01654:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 7573

 Score = 34.1 bits (68), Expect = 0.70
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -2 / +2

                                                      
Query: 142  NLRILWLPLVGPCSGQARCKRLRRRPP*EMKPLMNWVVLVEN 17
            NL  L   L  PC G A C   RRRPP    P++  ++ + N
Sbjct: 4259 NLLFLSRSLPCPCDGAALCSPRRRRPPPRTLPVLPHLLALPN 4384

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>LOC_Os08g45080:12008.t04229:unspliced-genomic expressed protein|
          Length = 10271

 Score = 30.4 bits (60), Expect(2) = 1.5
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +1 / -3

                                             
Query: 136  EDCLGACVAICIAYAETSCSGICTVTPLACQAC 234
            E C G C+  C  +    C+G C  +   C  C
Sbjct: 7329 E*CCGTCICDCCCFCNCCCAGSCC*SICFCWNC 7231



 Score = 24.9 bits (48), Expect(2) = 1.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3 / -2

                                          
Query: 222  LPGMQGCRLNSVRGHMLWRLYPSLLKRTAM 311
            LP  + CRL   R H LW    S+L  T +
Sbjct: 4267 LPHSRLCRLLE*RLHRLWYRVQSILLNTTL 4178

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>LOC_Os03g49300:12003.t04281:unspliced-genomic expressed protein|
          Length = 469

 Score = 32.7 bits (65), Expect = 1.8
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1 / +2

                                            
Query: 109 GQPVAATECEDCLGACVAICIAYAETSCSGICT 207
           G P     CE CL A  + C+ Y   SC   CT
Sbjct: 362 GDPSNKDGCESCLEAYYSKCVNYCGPSCHVTCT 460

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>LOC_Os02g38210:12002.t03459:unspliced-genomic elongation factor Tu, chloroplast precursor, putative, expressed|
          Length = 1993

 Score = 32.7 bits (65), Expect = 1.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2 / -3

                               
Query: 127 WLPLVGPCSGQARCKRLRRR 68
           W P   PC+G AR +R+RRR
Sbjct: 239 WTPPPPPCAGTARARRIRRR 180

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>LOC_Os12g26960:12012.t02409:unspliced-genomic expressed protein|
          Length = 601

 Score = 29.0 bits (57), Expect(2) = 2.4
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +2 / +3

                                 
Query: 35  PIHQWLHLSRWPPS*PFASCLS 100
           PI  W  L RWP S P ASC S
Sbjct: 57  PI*WWPPL*RWPSSPPCASCWS 122



 Score = 21.7 bits (41), Expect(2) = 2.4
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +1 / +2

                                  
Query: 127 TECEDCLGACVAICIAYAETSCS 195
           + C   +G C   C   A +SC+
Sbjct: 191 SSCAGGMGGCSGACTDPASSSCT 259



 Score = 30.9 bits (61), Expect = 6.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3 / -1

                             
Query: 99  DKHDANGYDGGHLER*SH 46
           D+HDA+G D GHL R  H
Sbjct: 121 DQHDAHGGDDGHLHRGGH 68

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>LOC_Os10g06910:12010.t00555:unspliced-genomic conserved hypothetical protein|
          Length = 5090

 Score = 32.2 bits (64), Expect = 2.5
 Identities = 12/50 (24%), Positives = 16/50 (32%)
 Frame = +1 / -1

                                                              
Query: 133  CEDCLGACVAICIAYAETSCSGICTVTPLACQACKDAALIQCGGTCYGGC 282
            C  C  +C+  C       CS  C     +C  C       C  +C   C
Sbjct: 2858 CSGCCWSCICTCCRC*SCGCSCCCCC*TWSCCCCSGCCFWCCSSSCGWFC 2709

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>LOC_Os03g49310:12003.t04282:unspliced-genomic expressed protein|
          Length = 2166

 Score = 32.2 bits (64), Expect = 2.5
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +1 / +1

                                            
Query: 109 GQPVAATECEDCLGACVAICIAYAETSCSGICT 207
           G P     CE CL A    C+ Y   SC   CT
Sbjct: 187 GDPSNKAGCESCLDAYYLKCLNYCGQSCRVTCT 285

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>LOC_Os02g06420:12002.t00540:unspliced-genomic conserved hypothetical protein|
          Length = 810

 Score = 27.2 bits (53), Expect(2) = 3.1
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1 / -2

                                                
Query: 109 GQPVAATECEDCLGACVAICIAYAETSCSGICTVTPL 219
           G       C+  + AC  +  A A +S + +  VTPL
Sbjct: 173 GDGAGVVGCDPGMAACSRVAAAVAASSAATLSPVTPL 63



 Score = 23.5 bits (45), Expect(2) = 3.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3 / -1

                         
Query: 60  QGGRRRSRLHRACP 101
           +GGRRR+R  R  P
Sbjct: 441 EGGRRRTRRRRTAP 400

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>LOC_Os03g30200:12003.t02631:unspliced-genomic mitochondrial import inner membrane translocase subunit Tim17,|
           putative, expressed
          Length = 4500

 Score = 28.1 bits (55), Expect(2) = 3.2
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1 / -3

                              
Query: 259 GGTCYGGCTLPC*SGRLCP 315
           GG  +G CT P  SGR CP
Sbjct: 244 GGGRWGSCTRP*GSGRRCP 188



 Score = 24.9 bits (48), Expect(2) = 3.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3 / -3

                                           
Query: 27  RTTQFINGFISQGGRRRSRLHRACPEHGPTSG 122
           RT+++  G  +  GRRR R  R     GP SG
Sbjct: 448 RTSRWRAGPGAGRGRRRWRRRRGWSSRGPPSG 353

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>LOC_Os01g62400:12001.t05615:unspliced-genomic hypothetical protein|
          Length = 1219

 Score = 26.3 bits (51), Expect(2) = 3.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3 / +3

                              
Query: 66  GRRRSRLHRACPEHGPTSG 122
           G    R+ RACP+HG   G
Sbjct: 102 GAGHDRVRRACPDHGFCKG 158



 Score = 24.9 bits (48), Expect(2) = 3.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1 / +1

                                      
Query: 190 CSGICTVTPLACQACKDAALIQCGGTC 270
           CSG CT+   A + C++A  +     C
Sbjct: 859 CSGSCTLHGRAYEGCQEAVSVNGPERC 939

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>LOC_Os11g32940:12011.t02890:unspliced-genomic F-box domain containing protein, expressed|
          Length = 4858

 Score = 31.8 bits (63), Expect = 3.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1 / +2

                               
Query: 427  VHICNLFLRFIIIFPFVSP 483
            VH+C   ++F I+FPF+SP
Sbjct: 3017 VHLCPSAIKFFIMFPFLSP 3073

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>LOC_Os02g57440:12002.t05316:unspliced-genomic protein kinase APK1B, chloroplast precursor, putative, expressed|
          Length = 1275

 Score = 31.8 bits (63), Expect = 3.4
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1 / +3

                                        
Query: 386 AYLYMAPGQGTKERRYATSLRPAPGHSRP 300
           A +   P QG + RR    LRP PG  RP
Sbjct: 627 ARVVAVPPQGRRRRRRRAPLRPPPGRHRP 713

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>LOC_Os06g09060:12006.t00785:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5024

 Score = 31.3 bits (62), Expect = 4.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3 / +2

                               
Query: 51   FISQGGRRRSRLHRACPEH 107
            F S+   RR RLHR CP H
Sbjct: 3779 FSSRSSARRRRLHRRCPRH 3835

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>LOC_Os04g10434:12004.t00877:unspliced-genomic glutamyl-tRNA, putative, expressed|
          Length = 6581

 Score = 31.3 bits (62), Expect = 4.7
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2 / +1

                         
Query: 29  NHPIHQWLHLSRWP 70
           +HP H+WL  SRWP
Sbjct: 499 HHPRHRWLERSRWP 540

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>LOC_Os01g72720:12001.t06559:unspliced-genomic hypothetical protein|
          Length = 1226

 Score = 31.3 bits (62), Expect = 4.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2 / +3

                                             
Query: 163 LQHKRLDNLRILWLPLVGPCSGQARCKRLRRRPP 62
           L+H+R ++ R+   PL    +G AR +R  RRPP
Sbjct: 132 LRHRRPEDGRLRGRPLPPQEAGHARARRQPRRPP 233

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>LOC_Os02g26160:12002.t02310:unspliced-genomic carbohydrate binding protein, putative, expressed|
          Length = 3953

 Score = 28.6 bits (56), Expect(2) = 5.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1 / +1

                                
Query: 142  CLGACVAICIAYAETSCSGI 201
            C G C+ +C+ Y +T+ SG+
Sbjct: 1993 CDGCCLWVCVVYIQTAGSGL 2052



 Score = 23.5 bits (45), Expect(2) = 5.2
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +1 / +3

                                
Query: 181  ETSCSGICTVTPLACQACKD 240
            E S  GIC    + C  C D
Sbjct: 2487 EDSFDGICNACLMVCAVCPD 2546

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>LOC_Os04g47190:12004.t04246:unspliced-genomic branched-chain-amino-acid aminotransferase, putative, expressed|
          Length = 4105

 Score = 24.9 bits (48), Expect(2) = 5.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2 / -2

                                 
Query: 277 LHSMCPRTELRRHPCMPGKQEV 212
           LHS       RR PC P + EV
Sbjct: 252 LHSRSAACRRRRRPCAPPRVEV 187



 Score = 23.1 bits (44), Expect(2) = 5.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3 / -2

                      
Query: 126 GCHWLAHVQDK 94
           GCHWL  V+ +
Sbjct: 60  GCHWLREVETR 28

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>LOC_Os10g25450:12010.t01963:unspliced-genomic subtilisin-like protease precursor, putative, expressed|
          Length = 3601

 Score = 30.9 bits (61), Expect = 6.5
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3 / +2

                              
Query: 273  WRLYPSLLKRTAMPWCWP 326
            WR  PS   R A  WCWP
Sbjct: 1259 WRRAPSSRPRAAPGWCWP 1312

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>LOC_Os10g03669:12010.t003606:unspliced-genomic expressed protein|
          Length = 4568

 Score = 30.9 bits (61), Expect = 6.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2 / +1

                                  
Query: 157  HKRLDNLRILWLPLVGPCSGQA 92
            H+RL+  +++WLP + P S  A
Sbjct: 3433 HQRLELFKVVWLPFIAPSSSPA 3498

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>LOC_Os08g14700:12008.t01345:unspliced-genomic glucan endo-1,3-beta-glucosidase 4 precursor, putative, expressed|
          Length = 2132

 Score = 30.9 bits (61), Expect = 6.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1 / +3

                                                
Query: 166  CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCY 273
            C+A +E   + +      AC +C D + IQ G  C+
Sbjct: 1617 CVAKSEVGDARLQNALDYACGSCADCSAIQPGAQCF 1724

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>LOC_Os07g38050:12007.t03473:unspliced-genomic expressed protein|
          Length = 810

 Score = 30.9 bits (61), Expect = 6.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1 / -1

                                  
Query: 250 IQCGGTCYGGCTLPC*SGRLCPG 318
           + CGG  YG C + C SG +  G
Sbjct: 420 LPCGGAVYGACPVGCCSGAIAGG 352

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>LOC_Os07g35540:12007.t03229:unspliced-genomic protein kinase, putative, expressed|
          Length = 3559

 Score = 30.9 bits (61), Expect = 6.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1 / +3

                                      
Query: 208 VTPLACQACKDAALIQCGGTCYGGCTL 288
           V   AC+AC  AA +   G C GG +L
Sbjct: 492 VNASACRACVAAAFVDAKGVCPGGISL 572

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>LOC_Os07g35510:12007.t03226:unspliced-genomic glycosyl hydrolases family 17 protein, expressed|
          Length = 2995

 Score = 30.9 bits (61), Expect = 6.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1 / +3

                                                
Query: 166  CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCY 273
            C+A +E   + +      AC +C D + IQ G  C+
Sbjct: 2379 CVAKSEVGDAQLQNALDYACGSCADCSAIQPGARCF 2486

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>LOC_Os07g28640:12007.t02554:unspliced-genomic hypothetical protein|
          Length = 1478

 Score = 30.9 bits (61), Expect = 6.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3 / +1

                                   
Query: 189 MQRHLHRHTSCLPGMQGCRLNSVR 260
           ++RH HR + C+P  Q CRL   R
Sbjct: 724 LRRHCHRSS*CIPLCQACRLQPRR 795

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>LOC_Os05g02480:12005.t00147:unspliced-genomic expressed protein|
          Length = 1230

 Score = 30.9 bits (61), Expect = 6.5
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +1 / -3

                                                                  
Query: 214 PLACQACKDAALIQCGGTCYGGCTLPC*SGRLCPGAGRKLVAYLRSLVPCPGAIY 378
           PL   +  DAA   C G    G T        C   G   +A + ++V CP  +Y
Sbjct: 559 PLLSPSPPDAAADDCAGDDADGSTSATSVSIACLHCGHAALASMAAVVQCPAQVY 395

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>LOC_Os01g59760:12001.t05363:unspliced-genomic bZIP transcription factor, putative, expressed|
          Length = 2999

 Score = 30.9 bits (61), Expect = 6.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1 / +2

                                            
Query: 115 PVAATECEDCLGACVAICIAYAETSCSGICTVT 213
           P  A+    C  +  + C A   TSCSG C++T
Sbjct: 77  PCTASPSTRCRASWASRCTA*TSTSCSGACSLT 175

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>LOC_Os11g08060:12011.t00697:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2952

 Score = 27.2 bits (53), Expect(2) = 7.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2 / +2

                                    
Query: 370  HRDKAPRNADMQLAYGQHQGIAVR 299
            HR  +PR     LA G HQ +A R
Sbjct: 1985 HRGPSPRGRGCYLAGGPHQAVAQR 2056



 Score = 24.0 bits (46), Expect(2) = 7.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2 / +3

                                    
Query: 109  PCSGQARCKRLRRRPP*EMKPLMN 38
            P   + RC+R RRRP  E + L++
Sbjct: 2718 PAWRERRCRRWRRRPRYEKELLVD 2789

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>LOC_Os12g13674:12012.t004170:unspliced-genomic expressed protein|
          Length = 1950

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1 / +1

                                 
Query: 259 GGTCYGGCTLPC*SGRLCPGAG 324
           GG CYG C+  C*    C  AG
Sbjct: 589 GGGCYGDCSGGC*GSGCCEAAG 654

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>LOC_Os11g28230:12011.t02436:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3593

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3 / -1

                                
Query: 285  PSLLKRTAMPWCWP*ASCIS 344
            PS ++RTA PWC P  S +S
Sbjct: 1442 PSAVERTAPPWCCPQRSWVS 1383

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>LOC_Os10g08100:12010.t00634:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1905

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2 / -1

                                     
Query: 373 WHRDKAPRNADMQLAYGQHQGIAVRF 296
           WHRD        +LA   HQG++ RF
Sbjct: 435 WHRDFVGLKVVFKLAQSHHQGVSKRF 358

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>LOC_Os07g47860:12007.t04420:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 8618

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3 / +3

                                
Query: 426  CAYM*FVPSFYYYISLRFTK 485
            C Y+ FVPSF++Y ++  T+
Sbjct: 4158 CLYILFVPSFFFYCNISLTR 4217

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>LOC_Os07g35560:12007.t03231:unspliced-genomic hydrolase, hydrolyzing O-glycosyl compounds, putative, expressed|
          Length = 2338

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1 / +2

                                                
Query: 166  CIAYAETSCSGICTVTPLACQACKDAALIQCGGTCY 273
            CIA  E   + +      AC +C D + IQ G  C+
Sbjct: 1715 CIAKPEVGDTRLQNALDYACGSCADCSAIQRGAQCF 1822

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>LOC_Os05g25490:12005.t02205:unspliced-genomic 1-aminocyclopropane-1-carboxylate synthase 1, putative|
          Length = 2574

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1 / +2

                                              
Query: 220  ACQACKDAALIQCGGTCYGGCTLPC*SGRLCPGA 321
            AC+AC       CG TC G C+    + R  P +
Sbjct: 2210 ACRACAATPGCSCGWTCGGSCSATAATPRPSPAS 2311

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>LOC_Os03g49270:12003.t04278:unspliced-genomic expressed protein|
          Length = 637

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1 / +1

                                           
Query: 109 GQPVAATECEDCLGACVAICIAYAETSCSGIC 204
           G P     C+ CL A  + C+ Y   +C  +C
Sbjct: 265 GDPSNKAGCKSCLQAYYSKCLNYCGQACRAVC 360

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>LOC_Os03g17250:12003.t01504:unspliced-genomic protein binding protein, putative, expressed|
          Length = 3170

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 15/66 (22%), Positives = 23/66 (34%)
 Frame = +1 / -3

                                                                        
Query: 154  CVAICIAYAETSCSGICTVTPLACQACKDAALIQCGGTCYGGCTLPC*SGRLCPGAGRKL 333
            C A         CS + +  P++C       +  C     G     C +GR CP      
Sbjct: 1188 CTATSCPARAAPCSAVSSRFPVSCFVIFFRRVAACAAAFAGSIPAACCAGRCCPSPDCWF 1009

                  
Query: 334  VAYLRS 351
             A +R+
Sbjct: 1008 FASIRT 991

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>LOC_Os03g08600:12003.t00717:unspliced-genomic transferase, transferring glycosyl groups, putative, expressed|
          Length = 5329

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2 / -1

                               
Query: 121 PLVGPCSGQARCKRLRRRPP 62
           P  G C  +AR +R RRRPP
Sbjct: 700 PTTGTCRRRARSRRRRRRPP 641

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>LOC_Os02g34990:12002.t03137:unspliced-genomic amino acid binding protein, putative, expressed|
          Length = 8329

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -2 / +2

                                 
Query: 139 LRILWLPLVGPCSGQARCKRLR 74
           L +L LPL  PCSG  RCK  R
Sbjct: 272 LLLLLLPLS*PCSGCVRCKTTR 337

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>LOC_Os01g64870:12001.t05853:unspliced-genomic expressed protein|
          Length = 5916

 Score = 30.4 bits (60), Expect = 8.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2 / +1

                                              
Query: 166 KLQHKRLDNLRILWLPLVGPCSGQARCKRLRRRPP 62
           K+ H RL        P+VG C G A   +LR +PP
Sbjct: 109 KVWHARLRTTTSSPPPIVGGCGGDATMLQLRLQPP 213

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>LOC_Os01g09440:12001.t00822:unspliced-genomic conserved hypothetical protein|
          Length = 516

 Score = 24.9 bits (48), Expect(2) = 9.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1 / -2

                                                
Query: 109 GQPVAATECEDCLGACVAICIAYAETSCSGICTVTPL 219
           G       C+    AC  +  A A +S + +  VTPL
Sbjct: 173 GDGAGVVGCDPGEAACSRVAAAVAASSAATLSPVTPL 63



 Score = 23.5 bits (45), Expect(2) = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3 / -1

                         
Query: 60  QGGRRRSRLHRACP 101
           +GGRRR+R  R  P
Sbjct: 438 EGGRRRTRRRRTAP 397


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 211,856,413
Number of extensions: 3625600
Number of successful extensions: 15603
Number of sequences better than 10.0: 44
Length of query: 165
Length of database: 55,613,886
Length adjustment: 47
Effective length of query: 118
Effective length of database: 52,968,820
Effective search space: 6250320760
Effective search space used: 6250320760
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result