| Clone Name | FLbaf3d24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13, complete sequence Length = 165993 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 438 taatttgttccttcgttttatt 459 |||||||||||||||||||||| Sbjct: 79342 taatttgttccttcgttttatt 79321
>emb|CR749170.6| Zebrafish DNA sequence from clone DKEY-190I13 in linkage group 21, complete sequence Length = 140121 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 ttttattattatatttccctt 473 ||||||||||||||||||||| Sbjct: 14447 ttttattattatatttccctt 14427
>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome Length = 860631 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 ttcgttttattattatatttc 469 ||||||||||||||||||||| Sbjct: 508952 ttcgttttattattatatttc 508972
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 atctgtacttgctctattctccac 25 |||||||||| ||||||||||||| Sbjct: 17951667 atctgtacttcctctattctccac 17951690
>emb|CU024870.3| Zebrafish DNA sequence from clone CH211-193F12, complete sequence Length = 116393 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 tatatgtaatttgttccttc 451 |||||||||||||||||||| Sbjct: 99263 tatatgtaatttgttccttc 99244
>gb|AC127546.4| Mus musculus BAC clone RP24-485N8 from chromosome 7, complete sequence Length = 151861 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tctctcaaggtggccgccgt 74 |||||||||||||||||||| Sbjct: 77321 tctctcaaggtggccgccgt 77302
>gb|AC100043.9| Mus musculus chromosome 3, clone RP23-32D13, complete sequence Length = 234931 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 aaccagtggcagccacagaatgcgaaga 140 ||||||||||||| ||||||||| |||| Sbjct: 146290 aaccagtggcagctacagaatgctaaga 146263
>gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, complete sequence Length = 175471 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 gttttattattatatttccc 471 |||||||||||||||||||| Sbjct: 78525 gttttattattatatttccc 78506
>gb|L14710.1| Caenorhabditis elegans cosmid K02D10, complete sequence Length = 18683 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ttcatcaatggcttcatctc 58 |||||||||||||||||||| Sbjct: 10072 ttcatcaatggcttcatctc 10053
>gb|AC122910.5| Mus musculus BAC clone RP23-54P3 from chromosome 6, complete sequence Length = 221390 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 tcgttttattattatatttc 469 |||||||||||||||||||| Sbjct: 135390 tcgttttattattatatttc 135371
>gb|AC004128.1| Homo sapiens PAC clone RP5-850G1 from 7, complete sequence Length = 93904 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 catatatgtaatttgttcct 449 |||||||||||||||||||| Sbjct: 33379 catatatgtaatttgttcct 33398
>gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179649 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 atctgtacttgctctattctccac 25 |||||||||| ||||||||||||| Sbjct: 23519 atctgtacttcctctattctccac 23496
>gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gene, complete cds Length = 220803 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 catatatgtaatttgttcct 449 |||||||||||||||||||| Sbjct: 112422 catatatgtaatttgttcct 112403
>gb|AC010059.6| Drosophila melanogaster 3L BAC RP98-17A14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171678 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 atctgtacttgctctattctccac 25 |||||||||| ||||||||||||| Sbjct: 141796 atctgtacttcctctattctccac 141773
>ref|NM_066540.3| Caenorhabditis elegans K02D10.4 (K02D10.4) mRNA, complete cds Length = 1497 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ttcatcaatggcttcatctc 58 |||||||||||||||||||| Sbjct: 576 ttcatcaatggcttcatctc 595
>emb|CR293501.10| Zebrafish DNA sequence from clone DKEYP-86F7 in linkage group 23, complete sequence Length = 203705 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 taatttgttccttcgtttta 457 |||||||||||||||||||| Sbjct: 19078 taatttgttccttcgtttta 19059
>emb|AL034559.4|PFMAL3P7 Plasmodium falciparum MAL3P7, complete sequence Length = 253305 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 tccttcgttttattattata 465 |||||||||||||||||||| Sbjct: 151293 tccttcgttttattattata 151312
>emb|CR925780.8| Zebrafish DNA sequence from clone CH211-112B19 in linkage group 5, complete sequence Length = 166407 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 tatatgtaatttgttccttc 451 |||||||||||||||||||| Sbjct: 144271 tatatgtaatttgttccttc 144290
>emb|BX544877.19| Zebrafish DNA sequence from clone CH211-202C4 in linkage group 25, complete sequence Length = 144487 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 tatatgtaatttgttccttc 451 |||||||||||||||||||| Sbjct: 6448 tatatgtaatttgttccttc 6429
>emb|BX571708.4| Zebrafish DNA sequence from clone DKEYP-74B2, complete sequence Length = 193197 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 tatatgtaatttgttccttc 451 |||||||||||||||||||| Sbjct: 155324 tatatgtaatttgttccttc 155343
>gb|AC006349.3|AC006349 Homo sapiens PAC clone RP5-892G5 from 14q24.3, complete sequence Length = 111937 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tttattattatatttccctt 473 |||||||||||||||||||| Sbjct: 99774 tttattattatatttccctt 99755
>emb|BX005331.8| Zebrafish DNA sequence from clone CH211-66K16 in linkage group 2, complete sequence Length = 186419 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 tatatgtaatttgttccttc 451 |||||||||||||||||||| Sbjct: 98002 tatatgtaatttgttccttc 97983
>emb|BX284636.7| Zebrafish DNA sequence from clone DKEYP-35F9 in linkage group 14, complete sequence Length = 171311 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 taatttgttccttcgtttta 457 |||||||||||||||||||| Sbjct: 147277 taatttgttccttcgtttta 147258
>ref|XM_672007.1| Plasmodium berghei strain ANKA Pb-fam-4 protein (PB000480.03.0) partial mRNA Length = 1173 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 ttccttcgttttattattat 464 |||||||||||||||||||| Sbjct: 825 ttccttcgttttattattat 806 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 73,382,399 Number of extensions: 4034750 Number of successful extensions: 305895 Number of sequences better than 10.0: 24 Number of HSP's gapped: 305895 Number of HSP's successfully gapped: 24 Length of query: 497 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 475 Effective length of database: 18,508,616,841 Effective search space: 8791592999475 Effective search space used: 8791592999475 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 13 (26.3 bits)