ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf5l02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK065252:Os12g0595000 286 1e-77
2AK100323:Os02g0809800 37 0.029
3AK067110:Os06g0493600 35 0.084
4AK105939:Os05g0322900 30 3.6

>AK065252:Os12g0595000 |
          Length = 471
 Score =  286 bits (733), Expect = 1e-77
 Identities = 144/191 (75%), Positives = 151/191 (79%), Gaps = 14/191 (7%)
 Frame = +2

Query: 314 RLRAQR----PGIGGEMKGASVPAVVGMPSPLFLWRFKAILFLLWGLCCCKIGWDSVMRM 481
           RLRAQR     G  GEMKG+++PAV  MPSPLFLWRFK +LFLLWGLCCCKIGWDSVMRM
Sbjct: 34  RLRAQRLGGEGGGAGEMKGSAIPAVAIMPSPLFLWRFKVVLFLLWGLCCCKIGWDSVMRM 93

Query: 482 SADLRDLFLYEVFLYYNPLFLVALMIWLWGVNLWVFAQSSVNYVKVFDLAQTHLSHREIW 661
           SADLRDLFLYE FLYYNPL LVALMIWLWGVNLWVFAQSSVNY +VFDLAQTHLSHREIW
Sbjct: 94  SADLRDLFLYEAFLYYNPLLLVALMIWLWGVNLWVFAQSSVNYARVFDLAQTHLSHREIW 153

Query: 662 RCATWLTLIVPTSMTAYLYLYSHGEVSLAASQPV*Y----------PARCIFSCHAFFFC 811
           RCATWLTLIVPTSMTAYLYLYSHGEVSLAASQPV            P    +    F+F 
Sbjct: 154 RCATWLTLIVPTSMTAYLYLYSHGEVSLAASQPVLLYAILLIVLLSPFDMFYLSSRFYFL 213

Query: 812 AGVHEIFWPLQ 844
             V  I  PLQ
Sbjct: 214 RTVWRIMLPLQ 224



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>AK100323:Os02g0809800 |
          Length = 815

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 19/74 (25%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = +2

Query: 515 VFLYYNPLFLVALMIWLWGVNLWVFAQSSVNYVKVFDL-AQTHLSHREIWRCATWLTLIV 691
           V+  ++   L++L I+L+G NL+++  + +N+  +FD  + T L+HR+ +  +  +   V
Sbjct: 460 VYHVFSMFALISLHIFLYGCNLFMWKNTRINHNFIFDFSSNTALTHRDAFLMSASIMCTV 519

Query: 692 PTSMTAYLYLYSHG 733
             ++   L+L + G
Sbjct: 520 VAALVINLFLKNAG 533



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>AK067110:Os06g0493600 |
          Length = 828

 Score = 35.0 bits (79), Expect = 0.084
 Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = +2

Query: 542 LVALMIWLWGVNLWVFAQSSVNYVKVFDLAQT-HLSHREIWR-CATWLTLIVPTSMTAYL 715
           L  L ++L+G N++++ ++ +NY  +F+   T  L +R+++  C T +T+++   M A+L
Sbjct: 481 LFFLHLFLYGCNIFMWRKTRINYTFIFEFTPTKELKYRDVFLICTTSMTIVIGV-MFAHL 539

Query: 716 YLYSHGEVSLA 748
            L   G  S A
Sbjct: 540 TLIVKGYSSCA 550



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>AK105939:Os05g0322900 |
          Length = 245

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
 Frame = +1

Query: 664 VCYL--AYFNCSHKYDSL 711
           VCY+  AYF C+HKYD L
Sbjct: 180 VCYVYRAYFRCTHKYDQL 197


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 30,030,498
Number of extensions: 719060
Number of successful extensions: 2244
Number of sequences better than 10.0: 4
Number of HSP's gapped: 2241
Number of HSP's successfully gapped: 4
Length of query: 338
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 237
Effective length of database: 11,355,714
Effective search space: 2691304218
Effective search space used: 2691304218
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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