ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf5l02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001073712.1| Oryza sativa (japonica cultivar-group) Os12g... 418 e-113
2dbj|AK065252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 412 e-111
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 165 4e-37
4emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306... 165 4e-37
5emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa... 165 4e-37
6ref|NM_122963.3| Arabidopsis thaliana unknown protein (AT5G35730... 48 0.062
7gb|AY070048.1| Arabidopsis thaliana unknown protein (At5g35730) ... 48 0.062
8gb|AY086064.1| Arabidopsis thaliana clone 20919 mRNA, complete s... 48 0.062
9emb|BX831502.1|CNS09ZSZ Arabidopsis thaliana Full-length cDNA Co... 48 0.062
10emb|BX829738.1|CNS0A024 Arabidopsis thaliana Full-length cDNA Co... 48 0.062
11emb|BX832491.1|CNS09ZSV Arabidopsis thaliana Full-length cDNA Co... 48 0.062
12emb|BX829787.1|CNS09ZZQ Arabidopsis thaliana Full-length cDNA Co... 48 0.062
13emb|BX831256.1|CNS09ZD3 Arabidopsis thaliana Full-length cDNA Co... 48 0.062
14gb|BT001971.1| Arabidopsis thaliana clone U18818 unknown protein... 48 0.062
15gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosom... 46 0.25
16dbj|AB011485.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.25
17gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.97
18emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 44 0.97
19gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 44 0.97
20gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, comp... 42 3.8
21emb|Z98052.1|HS505B13 Human DNA sequence from clone RP3-505B13 o... 42 3.8
22emb|AL162575.15| Human DNA sequence from clone RP11-310K10 on ch... 42 3.8
23gb|AC107016.20| Homo sapiens 12 BAC RP11-153F5 (Roswell Park Can... 42 3.8
24emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on ch... 42 3.8

>ref|NM_001073712.1| Oryza sativa (japonica cultivar-group) Os12g0595000 (Os12g0595000)
           mRNA, partial cds
          Length = 1975
 Score =  418 bits (211), Expect = e-113
 Identities = 367/419 (87%)
 Strand = Plus / Plus

                                                                       
Query: 344 ggcgagatgaagggcgcgtccgtccccgcggttgtgggcatgccttcgccgctttttctt 403
           ||||||||||||||  || || |||| ||||| | |  |||||| |||||||| || || 
Sbjct: 415 ggcgagatgaaggggtcggccatcccggcggtcgcgatcatgccctcgccgctcttcctc 474

                                                                       
Query: 404 tggcggtttaaggctatattgtttctcctgtggggtttatgctgttgcaagatagggtgg 463
           |||||||| |||| | ||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 475 tggcggttcaaggttgtattgtttctcctatggggtttatgctgttgcaagataggttgg 534

                                                                       
Query: 464 gactcggttatgaggatgagtgctgatcttcgagatttatttctgtatgaggttttctta 523
           ||||| |||||||| |||||||||||||| ||||| |||||||| || || | |||||||
Sbjct: 535 gactctgttatgagaatgagtgctgatctgcgagacttatttctttacgaagctttctta 594

                                                                       
Query: 524 tactataaccctctcttccttgtggcacttatgatttggttatggggagtgaatctgtgg 583
           ||||| || || ||  | |||||||| || |||||||||||||||||||| || ||||||
Sbjct: 595 tactacaatccgcttcttcttgtggctctgatgatttggttatggggagtaaacctgtgg 654

                                                                       
Query: 584 gtctttgcacaatcatcagtgaattatgtaaaagtgtttgatctcgcgcaaacacactta 643
           |||||||||||||||||||||||||| | ||  ||||||||||| || |||||||| |||
Sbjct: 655 gtctttgcacaatcatcagtgaattacgcaagggtgtttgatcttgcacaaacacattta 714

                                                                       
Query: 644 tcacaccgagaaatttggaggtgtgctacttggcttactttaattgttcccacaagtatg 703
           || || |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 715 tcgcatcgagaaatatggaggtgtgctacttggcttactttgattgttcccacgagtatg 774

                                                                      
Query: 704 acagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaaccagt 762
           ||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 775 acagcttacctatatttgtactcacatggagaagtgtcccttgctgcatctcaaccagt 833



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>dbj|AK065252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J09, full
           insert sequence
          Length = 1976

 Score =  412 bits (208), Expect = e-111
 Identities = 364/416 (87%)
 Strand = Plus / Plus

                                                                       
Query: 344 ggcgagatgaagggcgcgtccgtccccgcggttgtgggcatgccttcgccgctttttctt 403
           ||||||||||||||  || || |||| ||||| | |  |||||| |||||||| || || 
Sbjct: 416 ggcgagatgaaggggtcggccatcccggcggtcgcgatcatgccctcgccgctcttcctc 475

                                                                       
Query: 404 tggcggtttaaggctatattgtttctcctgtggggtttatgctgttgcaagatagggtgg 463
           |||||||| |||| | ||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 476 tggcggttcaaggttgtattgtttctcctatggggtttatgctgttgcaagataggttgg 535

                                                                       
Query: 464 gactcggttatgaggatgagtgctgatcttcgagatttatttctgtatgaggttttctta 523
           ||||| |||||||| |||||||||||||| ||||| |||||||| || || | |||||||
Sbjct: 536 gactctgttatgagaatgagtgctgatctgcgagacttatttctttacgaagctttctta 595

                                                                       
Query: 524 tactataaccctctcttccttgtggcacttatgatttggttatggggagtgaatctgtgg 583
           ||||| || || ||  | |||||||| || |||||||||||||||||||| || ||||||
Sbjct: 596 tactacaatccgcttcttcttgtggctctgatgatttggttatggggagtaaacctgtgg 655

                                                                       
Query: 584 gtctttgcacaatcatcagtgaattatgtaaaagtgtttgatctcgcgcaaacacactta 643
           |||||||||||||||||||||||||| | ||  ||||||||||| || |||||||| |||
Sbjct: 656 gtctttgcacaatcatcagtgaattacgcaagggtgtttgatcttgcacaaacacattta 715

                                                                       
Query: 644 tcacaccgagaaatttggaggtgtgctacttggcttactttaattgttcccacaagtatg 703
           || || |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 716 tcgcatcgagaaatatggaggtgtgctacttggcttactttgattgttcccacgagtatg 775

                                                                   
Query: 704 acagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           ||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 776 acagcttacctatatttgtactcacatggagaagtgtcccttgctgcatctcaacc 831



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score =  165 bits (83), Expect = 4e-37
 Identities = 101/107 (94%)
 Strand = Plus / Minus

                                                                            
Query: 664      gtgtgctacttggcttactttaattgttcccacaagtatgacagcttacctatatctgta 723
                ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct: 25012296 gtgtgctacttggcttactttgattgttcccacgagtatgacagcttacctatatttgta 25012237

                                                               
Query: 724      ctcacatggggaagtgtcacttgctgcttctcaaccagtgtaatatc 770
                ||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 25012236 ctcacatggagaagtgtcccttgctgcatctcaaccagtgtaatatc 25012190



 Score =  125 bits (63), Expect = 3e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                            
Query: 554      atgatttggttatggggagtgaatctgtgggtctttgcacaatcatcagtgaattatgta 613
                |||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |
Sbjct: 25012776 atgatttggttatggggagtaaacctgtgggtctttgcacaatcatcagtgaattacgca 25012717

                                                                   
Query: 614      aaagtgtttgatctcgcgcaaacacacttatcacaccgagaaatttggagg 664
                |  ||||||||||| || |||||||| ||||| || |||||||| ||||||
Sbjct: 25012716 agggtgtttgatcttgcacaaacacatttatcgcatcgagaaatatggagg 25012666



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                            
Query: 453      agatagggtgggactcggttatgaggatgagtgctgatcttcgagatttatttctgtatg 512
                ||||||| |||||||| |||||||| |||||||||||||| ||||| |||||||| || |
Sbjct: 25012993 agataggttgggactctgttatgagaatgagtgctgatctgcgagacttatttctttacg 25012934

                                
Query: 513      aggttttcttatacta 528
                | | ||||||||||||
Sbjct: 25012933 aagctttcttatacta 25012918



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 420      tattgtttctcctgtggggtttatgctgttgcaag 454
                ||||||||||||| |||||||||||||||||||||
Sbjct: 25013119 tattgtttctcctatggggtttatgctgttgcaag 25013085



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>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 121563

 Score =  165 bits (83), Expect = 4e-37
 Identities = 101/107 (94%)
 Strand = Plus / Plus

                                                                          
Query: 664    gtgtgctacttggcttactttaattgttcccacaagtatgacagcttacctatatctgta 723
              ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct: 119183 gtgtgctacttggcttactttgattgttcccacgagtatgacagcttacctatatttgta 119242

                                                             
Query: 724    ctcacatggggaagtgtcacttgctgcttctcaaccagtgtaatatc 770
              ||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 119243 ctcacatggagaagtgtcccttgctgcatctcaaccagtgtaatatc 119289



 Score =  125 bits (63), Expect = 3e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                          
Query: 554    atgatttggttatggggagtgaatctgtgggtctttgcacaatcatcagtgaattatgta 613
              |||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |
Sbjct: 118703 atgatttggttatggggagtaaacctgtgggtctttgcacaatcatcagtgaattacgca 118762

                                                                 
Query: 614    aaagtgtttgatctcgcgcaaacacacttatcacaccgagaaatttggagg 664
              |  ||||||||||| || |||||||| ||||| || |||||||| ||||||
Sbjct: 118763 agggtgtttgatcttgcacaaacacatttatcgcatcgagaaatatggagg 118813



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                          
Query: 453    agatagggtgggactcggttatgaggatgagtgctgatcttcgagatttatttctgtatg 512
              ||||||| |||||||| |||||||| |||||||||||||| ||||| |||||||| || |
Sbjct: 118486 agataggttgggactctgttatgagaatgagtgctgatctgcgagacttatttctttacg 118545

                              
Query: 513    aggttttcttatacta 528
              | | ||||||||||||
Sbjct: 118546 aagctttcttatacta 118561



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                 
Query: 420    tattgtttctcctgtggggtttatgctgttgcaag 454
              ||||||||||||| |||||||||||||||||||||
Sbjct: 118360 tattgtttctcctatggggtttatgctgttgcaag 118394



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>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146686

 Score =  165 bits (83), Expect = 4e-37
 Identities = 101/107 (94%)
 Strand = Plus / Plus

                                                                         
Query: 664   gtgtgctacttggcttactttaattgttcccacaagtatgacagcttacctatatctgta 723
             ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct: 94871 gtgtgctacttggcttactttgattgttcccacgagtatgacagcttacctatatttgta 94930

                                                            
Query: 724   ctcacatggggaagtgtcacttgctgcttctcaaccagtgtaatatc 770
             ||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 94931 ctcacatggagaagtgtcccttgctgcatctcaaccagtgtaatatc 94977



 Score =  125 bits (63), Expect = 3e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                         
Query: 554   atgatttggttatggggagtgaatctgtgggtctttgcacaatcatcagtgaattatgta 613
             |||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |
Sbjct: 94391 atgatttggttatggggagtaaacctgtgggtctttgcacaatcatcagtgaattacgca 94450

                                                                
Query: 614   aaagtgtttgatctcgcgcaaacacacttatcacaccgagaaatttggagg 664
             |  ||||||||||| || |||||||| ||||| || |||||||| ||||||
Sbjct: 94451 agggtgtttgatcttgcacaaacacatttatcgcatcgagaaatatggagg 94501



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                         
Query: 453   agatagggtgggactcggttatgaggatgagtgctgatcttcgagatttatttctgtatg 512
             ||||||| |||||||| |||||||| |||||||||||||| ||||| |||||||| || |
Sbjct: 94174 agataggttgggactctgttatgagaatgagtgctgatctgcgagacttatttctttacg 94233

                             
Query: 513   aggttttcttatacta 528
             | | ||||||||||||
Sbjct: 94234 aagctttcttatacta 94249



 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 420   tattgtttctcctgtggggtttatgctgttgcaag 454
             ||||||||||||| |||||||||||||||||||||
Sbjct: 94048 tattgtttctcctatggggtttatgctgttgcaag 94082



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>ref|NM_122963.3| Arabidopsis thaliana unknown protein (AT5G35730) mRNA, complete cds
          Length = 1761

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493
           |||| |||||| || |||||||| || ||||| || |||||||| ||||||   || || 
Sbjct: 430 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 489

                               
Query: 494 cgagatttatttctgtatga 513
           |||||||||||| |||||||
Sbjct: 490 cgagatttatttttgtatga 509



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 697 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 755



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>gb|AY070048.1| Arabidopsis thaliana unknown protein (At5g35730) mRNA, complete cds
          Length = 1669

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493
           |||| |||||| || |||||||| || ||||| || |||||||| ||||||   || || 
Sbjct: 420 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 479

                               
Query: 494 cgagatttatttctgtatga 513
           |||||||||||| |||||||
Sbjct: 480 cgagatttatttttgtatga 499



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 687 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 745



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>gb|AY086064.1| Arabidopsis thaliana clone 20919 mRNA, complete sequence
          Length = 1717

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493
           |||| |||||| || |||||||| || ||||| || |||||||| ||||||   || || 
Sbjct: 411 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 470

                               
Query: 494 cgagatttatttctgtatga 513
           |||||||||||| |||||||
Sbjct: 471 cgagatttatttttgtatga 490



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 678 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 736



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>emb|BX831502.1|CNS09ZSZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH11ZC01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1725

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493
           |||| |||||| || |||||||| || ||||| || |||||||| ||||||   || || 
Sbjct: 430 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 489

                               
Query: 494 cgagatttatttctgtatga 513
           |||||||||||| |||||||
Sbjct: 490 cgagatttatttttgtatga 509



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 697 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 755



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>emb|BX829738.1|CNS0A024 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB32ZC10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1566

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493
           |||| |||||| || |||||||| || ||||| || |||||||| ||||||   || || 
Sbjct: 386 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 445

                               
Query: 494 cgagatttatttctgtatga 513
           |||||||||||| |||||||
Sbjct: 446 cgagatttatttttgtatga 465



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 653 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 711



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>emb|BX832491.1|CNS09ZSV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH76ZG03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1683

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493
           |||| |||||| || |||||||| || ||||| || |||||||| ||||||   || || 
Sbjct: 379 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 438

                               
Query: 494 cgagatttatttctgtatga 513
           |||||||||||| |||||||
Sbjct: 439 cgagatttatttttgtatga 458



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 641 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 699



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>emb|BX829787.1|CNS09ZZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB37ZB02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1657

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493
           |||| |||||| || |||||||| || ||||| || |||||||| ||||||   || || 
Sbjct: 397 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 456

                               
Query: 494 cgagatttatttctgtatga 513
           |||||||||||| |||||||
Sbjct: 457 cgagatttatttttgtatga 476



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 664 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 722



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>emb|BX831256.1|CNS09ZD3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS72ZB09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1660

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493
           |||| |||||| || |||||||| || ||||| || |||||||| ||||||   || || 
Sbjct: 363 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 422

                               
Query: 494 cgagatttatttctgtatga 513
           |||||||||||| |||||||
Sbjct: 423 cgagatttatttttgtatga 442



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 630 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 688



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>gb|BT001971.1| Arabidopsis thaliana clone U18818 unknown protein (At5g35730) mRNA,
           complete cds
          Length = 1405

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493
           |||| |||||| || |||||||| || ||||| || |||||||| ||||||   || || 
Sbjct: 196 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 255

                               
Query: 494 cgagatttatttctgtatga 513
           |||||||||||| |||||||
Sbjct: 256 cgagatttatttttgtatga 275



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
           |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 463 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 521



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>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence
          Length = 215112

 Score = 46.1 bits (23), Expect = 0.25
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 419   atattgtttctcctgtggggttt 441
             |||||||||||||||||||||||
Sbjct: 50659 atattgtttctcctgtggggttt 50681



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>dbj|AB011485.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXH1
          Length = 87210

 Score = 46.1 bits (23), Expect = 0.25
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 701   atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759
             |||||||| || ||||||||||| || ||||||||||| ||  | |||||||| |||||
Sbjct: 40705 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 40763



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 323     gcgcagaggcccgggatcggcggcgagatg 352
               |||||| ||||||||||||||||| |||||
Sbjct: 2667146 gcgcagcggcccgggatcggcggcaagatg 2667175



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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 319    gcgcgcgcagaggcccgggatcggcg 344
              |||||||||| |||||||||||||||
Sbjct: 116705 gcgcgcgcagcggcccgggatcggcg 116730



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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 44.1 bits (22), Expect = 0.97
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 272    cgggctgttgcttcccgggttc 293
              ||||||||||||||||||||||
Sbjct: 203530 cgggctgttgcttcccgggttc 203509



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>gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, complete sequence
          Length = 224790

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   ggctatattgtttctcctgtg 435
             |||||||||||||||||||||
Sbjct: 73359 ggctatattgtttctcctgtg 73379



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>emb|Z98052.1|HS505B13 Human DNA sequence from clone RP3-505B13 on chromosome 1p36.2-36.3
             Contains part of the CAMTA1 gene for calmodulin binding
             transcription activator 1, complete sequence
          Length = 112467

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 941   aattgataaattggaacttac 961
             |||||||||||||||||||||
Sbjct: 77689 aattgataaattggaacttac 77709



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>emb|AL162575.15| Human DNA sequence from clone RP11-310K10 on chromosome 13 Contains the
             3' end of the PCDH20 gene for protocadherin 20 and a CpG
             island, complete sequence
          Length = 163231

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 583   ggtctttgcacaatcatcagtgaat 607
             |||||||||| ||||||||||||||
Sbjct: 40779 ggtctttgcagaatcatcagtgaat 40755



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>gb|AC107016.20| Homo sapiens 12 BAC RP11-153F5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191947

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 422    ttgtttctcctgtggggttta 442
              |||||||||||||||||||||
Sbjct: 184139 ttgtttctcctgtggggttta 184159



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>emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on chromosome 3, complete
             sequence
          Length = 106019

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   ggctatattgtttctcctgtg 435
             |||||||||||||||||||||
Sbjct: 35691 ggctatattgtttctcctgtg 35711


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 176,480,366
Number of extensions: 8956384
Number of successful extensions: 162728
Number of sequences better than 10.0: 24
Number of HSP's gapped: 162726
Number of HSP's successfully gapped: 42
Length of query: 1014
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 991
Effective length of database: 18,503,978,556
Effective search space: 18337442748996
Effective search space used: 18337442748996
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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