| Clone Name | FLbaf5l02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073712.1| Oryza sativa (japonica cultivar-group) Os12g0595000 (Os12g0595000) mRNA, partial cds Length = 1975 Score = 418 bits (211), Expect = e-113 Identities = 367/419 (87%) Strand = Plus / Plus Query: 344 ggcgagatgaagggcgcgtccgtccccgcggttgtgggcatgccttcgccgctttttctt 403 |||||||||||||| || || |||| ||||| | | |||||| |||||||| || || Sbjct: 415 ggcgagatgaaggggtcggccatcccggcggtcgcgatcatgccctcgccgctcttcctc 474 Query: 404 tggcggtttaaggctatattgtttctcctgtggggtttatgctgttgcaagatagggtgg 463 |||||||| |||| | ||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 475 tggcggttcaaggttgtattgtttctcctatggggtttatgctgttgcaagataggttgg 534 Query: 464 gactcggttatgaggatgagtgctgatcttcgagatttatttctgtatgaggttttctta 523 ||||| |||||||| |||||||||||||| ||||| |||||||| || || | ||||||| Sbjct: 535 gactctgttatgagaatgagtgctgatctgcgagacttatttctttacgaagctttctta 594 Query: 524 tactataaccctctcttccttgtggcacttatgatttggttatggggagtgaatctgtgg 583 ||||| || || || | |||||||| || |||||||||||||||||||| || |||||| Sbjct: 595 tactacaatccgcttcttcttgtggctctgatgatttggttatggggagtaaacctgtgg 654 Query: 584 gtctttgcacaatcatcagtgaattatgtaaaagtgtttgatctcgcgcaaacacactta 643 |||||||||||||||||||||||||| | || ||||||||||| || |||||||| ||| Sbjct: 655 gtctttgcacaatcatcagtgaattacgcaagggtgtttgatcttgcacaaacacattta 714 Query: 644 tcacaccgagaaatttggaggtgtgctacttggcttactttaattgttcccacaagtatg 703 || || |||||||| |||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 715 tcgcatcgagaaatatggaggtgtgctacttggcttactttgattgttcccacgagtatg 774 Query: 704 acagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaaccagt 762 ||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 775 acagcttacctatatttgtactcacatggagaagtgtcccttgctgcatctcaaccagt 833
>dbj|AK065252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J09, full insert sequence Length = 1976 Score = 412 bits (208), Expect = e-111 Identities = 364/416 (87%) Strand = Plus / Plus Query: 344 ggcgagatgaagggcgcgtccgtccccgcggttgtgggcatgccttcgccgctttttctt 403 |||||||||||||| || || |||| ||||| | | |||||| |||||||| || || Sbjct: 416 ggcgagatgaaggggtcggccatcccggcggtcgcgatcatgccctcgccgctcttcctc 475 Query: 404 tggcggtttaaggctatattgtttctcctgtggggtttatgctgttgcaagatagggtgg 463 |||||||| |||| | ||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 476 tggcggttcaaggttgtattgtttctcctatggggtttatgctgttgcaagataggttgg 535 Query: 464 gactcggttatgaggatgagtgctgatcttcgagatttatttctgtatgaggttttctta 523 ||||| |||||||| |||||||||||||| ||||| |||||||| || || | ||||||| Sbjct: 536 gactctgttatgagaatgagtgctgatctgcgagacttatttctttacgaagctttctta 595 Query: 524 tactataaccctctcttccttgtggcacttatgatttggttatggggagtgaatctgtgg 583 ||||| || || || | |||||||| || |||||||||||||||||||| || |||||| Sbjct: 596 tactacaatccgcttcttcttgtggctctgatgatttggttatggggagtaaacctgtgg 655 Query: 584 gtctttgcacaatcatcagtgaattatgtaaaagtgtttgatctcgcgcaaacacactta 643 |||||||||||||||||||||||||| | || ||||||||||| || |||||||| ||| Sbjct: 656 gtctttgcacaatcatcagtgaattacgcaagggtgtttgatcttgcacaaacacattta 715 Query: 644 tcacaccgagaaatttggaggtgtgctacttggcttactttaattgttcccacaagtatg 703 || || |||||||| |||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 716 tcgcatcgagaaatatggaggtgtgctacttggcttactttgattgttcccacgagtatg 775 Query: 704 acagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 ||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 776 acagcttacctatatttgtactcacatggagaagtgtcccttgctgcatctcaacc 831
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 165 bits (83), Expect = 4e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 664 gtgtgctacttggcttactttaattgttcccacaagtatgacagcttacctatatctgta 723 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 25012296 gtgtgctacttggcttactttgattgttcccacgagtatgacagcttacctatatttgta 25012237 Query: 724 ctcacatggggaagtgtcacttgctgcttctcaaccagtgtaatatc 770 ||||||||| |||||||| |||||||| ||||||||||||||||||| Sbjct: 25012236 ctcacatggagaagtgtcccttgctgcatctcaaccagtgtaatatc 25012190 Score = 125 bits (63), Expect = 3e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 554 atgatttggttatggggagtgaatctgtgggtctttgcacaatcatcagtgaattatgta 613 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| | | Sbjct: 25012776 atgatttggttatggggagtaaacctgtgggtctttgcacaatcatcagtgaattacgca 25012717 Query: 614 aaagtgtttgatctcgcgcaaacacacttatcacaccgagaaatttggagg 664 | ||||||||||| || |||||||| ||||| || |||||||| |||||| Sbjct: 25012716 agggtgtttgatcttgcacaaacacatttatcgcatcgagaaatatggagg 25012666 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 453 agatagggtgggactcggttatgaggatgagtgctgatcttcgagatttatttctgtatg 512 ||||||| |||||||| |||||||| |||||||||||||| ||||| |||||||| || | Sbjct: 25012993 agataggttgggactctgttatgagaatgagtgctgatctgcgagacttatttctttacg 25012934 Query: 513 aggttttcttatacta 528 | | |||||||||||| Sbjct: 25012933 aagctttcttatacta 25012918 Score = 61.9 bits (31), Expect = 4e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 420 tattgtttctcctgtggggtttatgctgttgcaag 454 ||||||||||||| ||||||||||||||||||||| Sbjct: 25013119 tattgtttctcctatggggtttatgctgttgcaag 25013085
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121563 Score = 165 bits (83), Expect = 4e-37 Identities = 101/107 (94%) Strand = Plus / Plus Query: 664 gtgtgctacttggcttactttaattgttcccacaagtatgacagcttacctatatctgta 723 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 119183 gtgtgctacttggcttactttgattgttcccacgagtatgacagcttacctatatttgta 119242 Query: 724 ctcacatggggaagtgtcacttgctgcttctcaaccagtgtaatatc 770 ||||||||| |||||||| |||||||| ||||||||||||||||||| Sbjct: 119243 ctcacatggagaagtgtcccttgctgcatctcaaccagtgtaatatc 119289 Score = 125 bits (63), Expect = 3e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 554 atgatttggttatggggagtgaatctgtgggtctttgcacaatcatcagtgaattatgta 613 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| | | Sbjct: 118703 atgatttggttatggggagtaaacctgtgggtctttgcacaatcatcagtgaattacgca 118762 Query: 614 aaagtgtttgatctcgcgcaaacacacttatcacaccgagaaatttggagg 664 | ||||||||||| || |||||||| ||||| || |||||||| |||||| Sbjct: 118763 agggtgtttgatcttgcacaaacacatttatcgcatcgagaaatatggagg 118813 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 453 agatagggtgggactcggttatgaggatgagtgctgatcttcgagatttatttctgtatg 512 ||||||| |||||||| |||||||| |||||||||||||| ||||| |||||||| || | Sbjct: 118486 agataggttgggactctgttatgagaatgagtgctgatctgcgagacttatttctttacg 118545 Query: 513 aggttttcttatacta 528 | | |||||||||||| Sbjct: 118546 aagctttcttatacta 118561 Score = 61.9 bits (31), Expect = 4e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 420 tattgtttctcctgtggggtttatgctgttgcaag 454 ||||||||||||| ||||||||||||||||||||| Sbjct: 118360 tattgtttctcctatggggtttatgctgttgcaag 118394
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 165 bits (83), Expect = 4e-37 Identities = 101/107 (94%) Strand = Plus / Plus Query: 664 gtgtgctacttggcttactttaattgttcccacaagtatgacagcttacctatatctgta 723 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 94871 gtgtgctacttggcttactttgattgttcccacgagtatgacagcttacctatatttgta 94930 Query: 724 ctcacatggggaagtgtcacttgctgcttctcaaccagtgtaatatc 770 ||||||||| |||||||| |||||||| ||||||||||||||||||| Sbjct: 94931 ctcacatggagaagtgtcccttgctgcatctcaaccagtgtaatatc 94977 Score = 125 bits (63), Expect = 3e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 554 atgatttggttatggggagtgaatctgtgggtctttgcacaatcatcagtgaattatgta 613 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| | | Sbjct: 94391 atgatttggttatggggagtaaacctgtgggtctttgcacaatcatcagtgaattacgca 94450 Query: 614 aaagtgtttgatctcgcgcaaacacacttatcacaccgagaaatttggagg 664 | ||||||||||| || |||||||| ||||| || |||||||| |||||| Sbjct: 94451 agggtgtttgatcttgcacaaacacatttatcgcatcgagaaatatggagg 94501 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 453 agatagggtgggactcggttatgaggatgagtgctgatcttcgagatttatttctgtatg 512 ||||||| |||||||| |||||||| |||||||||||||| ||||| |||||||| || | Sbjct: 94174 agataggttgggactctgttatgagaatgagtgctgatctgcgagacttatttctttacg 94233 Query: 513 aggttttcttatacta 528 | | |||||||||||| Sbjct: 94234 aagctttcttatacta 94249 Score = 61.9 bits (31), Expect = 4e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 420 tattgtttctcctgtggggtttatgctgttgcaag 454 ||||||||||||| ||||||||||||||||||||| Sbjct: 94048 tattgtttctcctatggggtttatgctgttgcaag 94082
>ref|NM_122963.3| Arabidopsis thaliana unknown protein (AT5G35730) mRNA, complete cds Length = 1761 Score = 48.1 bits (24), Expect = 0.062 Identities = 66/80 (82%) Strand = Plus / Plus Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493 |||| |||||| || |||||||| || ||||| || |||||||| |||||| || || Sbjct: 430 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 489 Query: 494 cgagatttatttctgtatga 513 |||||||||||| ||||||| Sbjct: 490 cgagatttatttttgtatga 509 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 697 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 755
>gb|AY070048.1| Arabidopsis thaliana unknown protein (At5g35730) mRNA, complete cds Length = 1669 Score = 48.1 bits (24), Expect = 0.062 Identities = 66/80 (82%) Strand = Plus / Plus Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493 |||| |||||| || |||||||| || ||||| || |||||||| |||||| || || Sbjct: 420 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 479 Query: 494 cgagatttatttctgtatga 513 |||||||||||| ||||||| Sbjct: 480 cgagatttatttttgtatga 499 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 687 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 745
>gb|AY086064.1| Arabidopsis thaliana clone 20919 mRNA, complete sequence Length = 1717 Score = 48.1 bits (24), Expect = 0.062 Identities = 66/80 (82%) Strand = Plus / Plus Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493 |||| |||||| || |||||||| || ||||| || |||||||| |||||| || || Sbjct: 411 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 470 Query: 494 cgagatttatttctgtatga 513 |||||||||||| ||||||| Sbjct: 471 cgagatttatttttgtatga 490 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 678 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 736
>emb|BX831502.1|CNS09ZSZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH11ZC01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1725 Score = 48.1 bits (24), Expect = 0.062 Identities = 66/80 (82%) Strand = Plus / Plus Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493 |||| |||||| || |||||||| || ||||| || |||||||| |||||| || || Sbjct: 430 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 489 Query: 494 cgagatttatttctgtatga 513 |||||||||||| ||||||| Sbjct: 490 cgagatttatttttgtatga 509 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 697 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 755
>emb|BX829738.1|CNS0A024 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1566 Score = 48.1 bits (24), Expect = 0.062 Identities = 66/80 (82%) Strand = Plus / Plus Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493 |||| |||||| || |||||||| || ||||| || |||||||| |||||| || || Sbjct: 386 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 445 Query: 494 cgagatttatttctgtatga 513 |||||||||||| ||||||| Sbjct: 446 cgagatttatttttgtatga 465 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 653 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 711
>emb|BX832491.1|CNS09ZSV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH76ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1683 Score = 48.1 bits (24), Expect = 0.062 Identities = 66/80 (82%) Strand = Plus / Plus Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493 |||| |||||| || |||||||| || ||||| || |||||||| |||||| || || Sbjct: 379 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 438 Query: 494 cgagatttatttctgtatga 513 |||||||||||| ||||||| Sbjct: 439 cgagatttatttttgtatga 458 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 641 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 699
>emb|BX829787.1|CNS09ZZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1657 Score = 48.1 bits (24), Expect = 0.062 Identities = 66/80 (82%) Strand = Plus / Plus Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493 |||| |||||| || |||||||| || ||||| || |||||||| |||||| || || Sbjct: 397 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 456 Query: 494 cgagatttatttctgtatga 513 |||||||||||| ||||||| Sbjct: 457 cgagatttatttttgtatga 476 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 664 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 722
>emb|BX831256.1|CNS09ZD3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZB09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1660 Score = 48.1 bits (24), Expect = 0.062 Identities = 66/80 (82%) Strand = Plus / Plus Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493 |||| |||||| || |||||||| || ||||| || |||||||| |||||| || || Sbjct: 363 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 422 Query: 494 cgagatttatttctgtatga 513 |||||||||||| ||||||| Sbjct: 423 cgagatttatttttgtatga 442 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 630 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 688
>gb|BT001971.1| Arabidopsis thaliana clone U18818 unknown protein (At5g35730) mRNA, complete cds Length = 1405 Score = 48.1 bits (24), Expect = 0.062 Identities = 66/80 (82%) Strand = Plus / Plus Query: 434 tggggtttatgctgttgcaagatagggtgggactcggttatgaggatgagtgctgatctt 493 |||| |||||| || |||||||| || ||||| || |||||||| |||||| || || Sbjct: 196 tgggctttatgttgctgcaagattggatgggattcagttatgagaatgagtatcgacctg 255 Query: 494 cgagatttatttctgtatga 513 |||||||||||| ||||||| Sbjct: 256 cgagatttatttttgtatga 275 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 463 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 521
>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence Length = 215112 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 419 atattgtttctcctgtggggttt 441 ||||||||||||||||||||||| Sbjct: 50659 atattgtttctcctgtggggttt 50681
>dbj|AB011485.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXH1 Length = 87210 Score = 46.1 bits (23), Expect = 0.25 Identities = 50/59 (84%) Strand = Plus / Plus Query: 701 atgacagcttacctatatctgtactcacatggggaagtgtcacttgctgcttctcaacc 759 |||||||| || ||||||||||| || ||||||||||| || | |||||||| ||||| Sbjct: 40705 atgacagcgtatctatatctgtattctcatggggaagtatctttggctgcttcacaacc 40763
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.97 Identities = 28/30 (93%) Strand = Plus / Plus Query: 323 gcgcagaggcccgggatcggcggcgagatg 352 |||||| ||||||||||||||||| ||||| Sbjct: 2667146 gcgcagcggcccgggatcggcggcaagatg 2667175
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 44.1 bits (22), Expect = 0.97 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 gcgcgcgcagaggcccgggatcggcg 344 |||||||||| ||||||||||||||| Sbjct: 116705 gcgcgcgcagcggcccgggatcggcg 116730
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 44.1 bits (22), Expect = 0.97 Identities = 22/22 (100%) Strand = Plus / Minus Query: 272 cgggctgttgcttcccgggttc 293 |||||||||||||||||||||| Sbjct: 203530 cgggctgttgcttcccgggttc 203509
>gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, complete sequence Length = 224790 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 ggctatattgtttctcctgtg 435 ||||||||||||||||||||| Sbjct: 73359 ggctatattgtttctcctgtg 73379
>emb|Z98052.1|HS505B13 Human DNA sequence from clone RP3-505B13 on chromosome 1p36.2-36.3 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1, complete sequence Length = 112467 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 941 aattgataaattggaacttac 961 ||||||||||||||||||||| Sbjct: 77689 aattgataaattggaacttac 77709
>emb|AL162575.15| Human DNA sequence from clone RP11-310K10 on chromosome 13 Contains the 3' end of the PCDH20 gene for protocadherin 20 and a CpG island, complete sequence Length = 163231 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 583 ggtctttgcacaatcatcagtgaat 607 |||||||||| |||||||||||||| Sbjct: 40779 ggtctttgcagaatcatcagtgaat 40755
>gb|AC107016.20| Homo sapiens 12 BAC RP11-153F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191947 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ttgtttctcctgtggggttta 442 ||||||||||||||||||||| Sbjct: 184139 ttgtttctcctgtggggttta 184159
>emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on chromosome 3, complete sequence Length = 106019 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 ggctatattgtttctcctgtg 435 ||||||||||||||||||||| Sbjct: 35691 ggctatattgtttctcctgtg 35711 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 176,480,366 Number of extensions: 8956384 Number of successful extensions: 162728 Number of sequences better than 10.0: 24 Number of HSP's gapped: 162726 Number of HSP's successfully gapped: 42 Length of query: 1014 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 991 Effective length of database: 18,503,978,556 Effective search space: 18337442748996 Effective search space used: 18337442748996 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)