>Q62967:ERG19_RAT Diphosphomevalonate decarboxylase - Rattus norvegicus (Rat)|
          Length = 401
 Score =  338 bits (868), Expect = 3e-92
 Identities = 192/410 (46%), Positives = 250/410 (60%), Gaps = 2/410 (0%)
 Frame = +1

Query: 127  ATEPQWVLMATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHPSATTTVAASPSF 306
            A+E    LM T  +P NIAVIKYWGKRDEALILP+N S+SVTL  D    TTT A S  F
Sbjct: 2    ASEKPQDLMVTCTAPVNIAVIKYWGKRDEALILPINPSLSVTLHQDQLKTTTTAAISKDF 61

Query: 307  PSDRMWLNGKEIALSGGRFQSCLREIRKRARXXXXXXXXXXXXXXDWENLHVHIASYNNF 486
              DR+WLNG+E  +   R Q+CLREIR+ AR                    VH+AS NNF
Sbjct: 62   TEDRIWLNGREEDVGQPRLQACLREIRRLARKRRSTGDGDALPLS--LGYKVHVASVNNF 119

Query: 487  PTXXXXXXXXXXXXCLVFTLGKLMNVNEDYGELSSIARQGSGSACRSIYGGFVKWCMGKN 666
            PT            CL +TL ++  V    G+LS +AR+GSGSACRS+YGGFV+W MG+ 
Sbjct: 120  PTAAGLASSAAGYACLAYTLARVYGVE---GDLSEVARRGSGSACRSLYGGFVEWQMGEQ 176

Query: 667  DDGRDSMAVQLVDETHWDDLVIIIAVVSSKQKETSSTSGMRDTVETSPLLQYRAQTVVPS 846
             DG+DS+A Q+  E HW  L ++I VVS+++K T ST GM+ +V TS LL++RA+++VP 
Sbjct: 177  ADGKDSIARQIAPEWHWPQLRVLILVVSAEKKPTGSTVGMQTSVATSTLLKFRAESIVPE 236

Query: 847  RILKMEDAIKNRDFESFARLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHSE 1026
            R+ +M   I+ +DF++FA+LT  DSNQFHA CLDT PPI Y+NDTS RII LV ++N   
Sbjct: 237  RMKEMTRCIQEQDFQAFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNAHH 296

Query: 1027 GTPQVAYTFDAGPNAVLIARNRKTATLLLQRLLYTFPPQENDLDSYMLGDKSILSDAGLQ 1206
            G  +VAYTFDAGPNAV+      T    +  + ++FPP  N       GDK +    GLQ
Sbjct: 297  GQTKVAYTFDAGPNAVIFTL-EDTVAEFVAAVRHSFPPAAN-------GDKFL---KGLQ 345

Query: 1207 SIADVEALPPPPEMKTQ--NQKFKGDVSYFICSRPGAGPKVLVDESHSLI 1350
                V  +    E+KT    +   G V Y I ++ G GP+VL D  H L+
Sbjct: 346  ----VAPVLLSDELKTSLATEPSPGGVQYIIATQVGPGPQVLDDPHHHLL 391

>Q99JF5:ERG19_MOUSE Diphosphomevalonate decarboxylase - Mus musculus (Mouse)|
          Length = 401

 Score =  336 bits (862), Expect = 1e-91
 Identities = 192/416 (46%), Positives = 253/416 (60%), Gaps = 2/416 (0%)
 Frame = +1

Query: 127  ATEPQWVLMATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHPSATTTVAASPSF 306
            A+E    LM T  +P NIAVIKYWGKRDEALILP+N S+SVTL  D    TTTVA S  F
Sbjct: 2    ASEKPQDLMVTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAISKDF 61

Query: 307  PSDRMWLNGKEIALSGGRFQSCLREIRKRARXXXXXXXXXXXXXXDWENLHVHIASYNNF 486
              DR+WLNG+E  +   R Q+CLREIR+ AR                 +  VH+AS NNF
Sbjct: 62   TEDRIWLNGREEDVGQPRLQACLREIRRLARKRRSTEDGDTLPLS--LSYKVHVASVNNF 119

Query: 487  PTXXXXXXXXXXXXCLVFTLGKLMNVNEDYGELSSIARQGSGSACRSIYGGFVKWCMGKN 666
            PT            CL +TL ++  V    G+LS +AR+GSGSACRS+YGGFV+W MG+ 
Sbjct: 120  PTAAGLASSAAGYACLAYTLAQVYGVE---GDLSEVARRGSGSACRSLYGGFVEWQMGEQ 176

Query: 667  DDGRDSMAVQLVDETHWDDLVIIIAVVSSKQKETSSTSGMRDTVETSPLLQYRAQTVVPS 846
             DG+DS+A Q+  E HW  L I+I VVS+ +K+T ST GM+ +VETS LL++RA++ VP 
Sbjct: 177  ADGKDSIARQIAPEWHWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESGVPE 236

Query: 847  RILKMEDAIKNRDFESFARLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHSE 1026
            R+ +M   I+ +DF+ F +LT  DSNQFHA CLDT PPI Y+NDTS RII LV ++N  +
Sbjct: 237  RMKEMTRCIQEQDFQGFGQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHQ 296

Query: 1027 GTPQVAYTFDAGPNAVLIARNRKTATLLLQRLLYTFPPQENDLDSYMLGDK--SILSDAG 1200
            G  +VAYTFDAGPNAV+      T    +  + ++FPP  N  D ++ G +   +L    
Sbjct: 297  GQTKVAYTFDAGPNAVIFTL-EDTVAEFVAAVRHSFPPAANG-DKFLKGLQVAPVLLSDE 354

Query: 1201 LQSIADVEALPPPPEMKTQNQKFKGDVSYFICSRPGAGPKVLVDESHSLIDSATGL 1368
            L++   VE  P             G V Y I ++ G GP+VL D++H  +    GL
Sbjct: 355  LKAALAVEPSP-------------GGVQYIIATQVGPGPQVL-DDTHDHLLGQDGL 396

>P53602:ERG19_HUMAN Diphosphomevalonate decarboxylase - Homo sapiens (Human)|
          Length = 400

 Score =  325 bits (833), Expect = 3e-88
 Identities = 184/400 (46%), Positives = 242/400 (60%), Gaps = 2/400 (0%)
 Frame = +1

Query: 157  TGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHPSATTTVAASPSFPSDRMWLNGK 336
            T  +P NIAVIKYWGKRDE L+LP+N S+SVTL  D    TTT   S  F  DR+WLNG+
Sbjct: 11   TCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNGR 70

Query: 337  EIALSGGRFQSCLREIRKRARXXXXXXXXXXXXXXDWENLHVHIASYNNFPTXXXXXXXX 516
            E  +   R Q+CLREIR  AR                 +  VH+AS NNFPT        
Sbjct: 71   EEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSS--LSCKVHVASVNNFPTAAGLASSA 128

Query: 517  XXXXCLVFTLGKLMNVNEDYGELSSIARQGSGSACRSIYGGFVKWCMGKNDDGRDSMAVQ 696
                CL +TL ++  V  D   LS +AR+GSGSACRS+YGGFV+W MG+  DG+DS+A Q
Sbjct: 129  AGYACLAYTLARVYGVESD---LSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQ 185

Query: 697  LVDETHWDDLVIIIAVVSSKQKETSSTSGMRDTVETSPLLQYRAQTVVPSRILKMEDAIK 876
            +  E+HW +L ++I VVS+++K T ST GMR +VETSPLL++RA++VVP+R+ +M   I+
Sbjct: 186  VAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIR 245

Query: 877  NRDFESFARLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHSEGTPQVAYTFD 1056
             RDF SFA+LT  DSNQFHA CLDT PPI Y+N  S RII LV ++N   G  +VAYTFD
Sbjct: 246  ERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFD 305

Query: 1057 AGPNAVLIARNRKTATLLLQRLLYTFPPQENDLDSYMLG--DKSILSDAGLQSIADVEAL 1230
            AGPNAV+   +  T    +  + + FPP  N  D+++ G   +     A LQ+   +E  
Sbjct: 306  AGPNAVIFTLD-DTVAEFVAAVWHGFPPGSNG-DTFLKGLQVRPAPLSAELQAALAMEPT 363

Query: 1231 PPPPEMKTQNQKFKGDVSYFICSRPGAGPKVLVDESHSLI 1350
            P             G V Y I ++ G GP++L D    L+
Sbjct: 364  P-------------GGVKYIIVTQVGPGPQILDDPCAHLL 390

>P32377:ERG19_YEAST Diphosphomevalonate decarboxylase - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 396

 Score =  282 bits (722), Expect = 2e-75
 Identities = 167/412 (40%), Positives = 227/412 (55%), Gaps = 2/412 (0%)
 Frame = +1

Query: 145  VLMATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHPSATTTVAASPSFPSDRMW 324
            V  A+  +P NIA +KYWGKRD  L LP N SISVTL  D     T+ A +P F  D +W
Sbjct: 3    VYTASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTLTSAATAPEFERDTLW 62

Query: 325  LNGKEIALSGGRFQSCLREIRKRARXXXXXXXXXXXXXXDWENLHVHIASYNNFPTXXXX 504
            LNG+  ++   R Q+CLR++R+  R               W+   +HI S NNFPT    
Sbjct: 63   LNGEPHSIDNERTQNCLRDLRQ-LRKEMESKDASLPTLSQWK---LHIVSENNFPTAAGL 118

Query: 505  XXXXXXXXCLVFTLGKLMNVNEDYGELSSIARQGSGSACRSIYGGFVKWCMGKNDDGRDS 684
                     LV  + KL  + +   E+S IAR+GSGSACRS++GG+V W MGK +DG DS
Sbjct: 119  ASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGSGSACRSLFGGYVAWEMGKAEDGHDS 178

Query: 685  MAVQLVDETHWDDLVIIIAVVSSKQKETSSTSGMRDTVETSPLLQYRAQTVVPSRILKME 864
            MAVQ+ D + W  +   + VVS  +K+ SST GM+ TV TS L + R + VVP R   M 
Sbjct: 179  MAVQIADSSDWPQMKACVLVVSDIKKDVSSTQGMQLTVATSELFKERIEHVVPKRFEVMR 238

Query: 865  DAIKNRDFESFARLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHSEGTPQVA 1044
             AI  +DF +FA+ T  DSN FHA CLD+ PPIFYMNDTS RIIS     N   G   VA
Sbjct: 239  KAIVEKDFATFAKETMMDSNSFHATCLDSFPPIFYMNDTSKRIISWCHTINQFYGETIVA 298

Query: 1045 YTFDAGPNAVL--IARNRKTATLLLQRLLYTFPPQENDLDSYMLGDKSILSDAGLQSIAD 1218
            YTFDAGPNAVL  +A N       + +L  + P  +    +  L   +   ++   +  +
Sbjct: 299  YTFDAGPNAVLYYLAENESKLFAFIYKLFGSVPGWDKKFTTEQLEAFNHQFESSNFTARE 358

Query: 1219 VEALPPPPEMKTQNQKFKGDVSYFICSRPGAGPKVLVDESHSLIDSATGLAK 1374
            ++             + + DV+  I ++ G+GP+   + + SLID+ TGL K
Sbjct: 359  LDL------------ELQKDVARVILTQVGSGPQ---ETNESLIDAKTGLPK 395

>P27190:TRAC5_ECOLI DNA primase traC - Escherichia coli|
          Length = 1448

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +1

Query: 859 MEDAIKNRDFESFARLTCADSNQFHAVCLDTSPPIFYMNDTSH 987
           +EDA+++R  E+   +T  D  QF+AV  D   P+F + D SH
Sbjct: 561 LEDALRSRGLETVGSITGTDPEQFYAVAHDRLSPVFGI-DPSH 602

>Q7S873:DBP7_NEUCR ATP-dependent RNA helicase dbp-7 - Neurospora crassa|
          Length = 814

 Score = 33.1 bits (74), Expect = 3.4
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
 Frame = +1

Query: 685 MAVQLVDETHWDDLVIIIAVVSSKQKETSSTSGMRDTVETSPLLQYRAQTVVPSRI---- 852
           M VQ + E   +D V I A  S  +K+  +  G  +T  ++P    +A  V P+++    
Sbjct: 368 MNVQKLGEISLEDAVHITASKSDMEKDAET--GAVETAFSAPAQLKQAAIVTPAKLRLVT 425

Query: 853 ----LKMEDAIKNRDFESFARLTCADSNQFHAVCLDTSPP 960
               LK   A K    ++   ++CADS  +H   L ++ P
Sbjct: 426 LIALLKSTFARKGSVMKAIIFISCADSVDYHFELLKSTTP 465

>Q6MTZ2:ENO_MYCMS Enolase - Mycoplasma mycoides subsp. mycoides SC|
          Length = 451

 Score = 32.3 bits (72), Expect = 5.8
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
 Frame = +1

Query: 760  KETSSTSGMRDTVETSPLLQYRAQTVVPSRILKMEDAIKNRDFESFARLT--CADSNQFH 933
            K+    +    ++ T  ++ Y  + V    I+ +ED +   D+E F +LT    D  Q  
Sbjct: 274  KKIEKVTNQEWSLTTDEMISYLEKLVDNYPIISIEDGLAETDWEGFTKLTQKIGDKVQIV 333

Query: 934  AVCLDTSPPIFYMNDTSHR-----IISLVEKWNHSEGTPQVAYTFDAGPNAVLIARNRKT 1098
               L T+ P F     + +     +I L +    SE    +  T  AG  AV+  R+ +T
Sbjct: 334  GDDLFTTNPKFIKQGINKKAANSTLIKLNQIGTLSETVEAITMTQKAGWTAVVSHRSGET 393

Query: 1099 ATLLLQRLLYTF 1134
                +  L   F
Sbjct: 394  EDTTIADLAVAF 405

>Q9M6N7:AMT2_ARATH Ammonium transporter 2 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 475

 Score = 32.3 bits (72), Expect = 5.8
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -1

Query: 1353 INQGVALIDKNFWAGPRPTADEVA----NITLEFLVLGLHLWRRWKGLDIG 1213
            ++ GVA     +W GPRP AD       N+ L     GL LW  W G + G
Sbjct: 189  LSSGVAGFVAAYWVGPRPKADRERFPPNNVLLMLAGAGL-LWMGWSGFNGG 238

>Q58379:Y969_METJA Uncharacterized protein MJ0969 - Methanococcus jannaschii|
          Length = 270

 Score = 32.0 bits (71), Expect = 7.6
 Identities = 22/101 (21%), Positives = 44/101 (43%)
 Frame = +1

Query: 478 NNFPTXXXXXXXXXXXXCLVFTLGKLMNVNEDYGELSSIARQGSGSACRSIYGGFVKWCM 657
           ++FP              L   L +++N+NE+Y E++ I+    G+    +   +VK  +
Sbjct: 80  SDFPLGSGLGMSGGCALILAKKLNEMLNLNENYAEIAHISEVECGTGLGDVIAQYVKGFV 139

Query: 658 GKNDDGRDSMAVQLVDETHWDDLVIIIAVVSSKQKETSSTS 780
            +   G      ++V +   DD  III +   K+ +   T+
Sbjct: 140 IRKTPGFPINVEKIVVD---DDYYIIIEIFGKKETKEIITN 177


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 276,010,566
Number of extensions: 6319325
Number of successful extensions: 16379
Number of sequences better than 10.0: 9
Number of HSP's gapped: 16365
Number of HSP's successfully gapped: 9
Length of query: 533
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 415
Effective length of database: 68,319,629
Effective search space: 28352646035
Effective search space used: 28352646035
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)