| Clone Name | FLbaf11c05 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g47150:12002.t04300:unspliced-genomic DNA topoisomerase 2, putative, expressed| Length = 7584 Score = 100 bits (214), Expect(4) = 4e-24 Identities = 45/57 (78%), Positives = 49/57 (85%) Frame = -3 / -2 Query: 278 SSSSTPVEVLAILCRTEPLFLLKGESLILRTFFSGEGALRLLSSVGLNISSITFCLM 108 S SS VE + LC+TEPLFL KGE+LILRTFFSG+GAL LLSSVGLNISSITFCLM Sbjct: 6773 SVSSVLVEAVEALCKTEPLFLWKGEALILRTFFSGDGALVLLSSVGLNISSITFCLM 6603 Score = 27.6 bits (54), Expect(4) = 4e-24 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 / -2 Query: 320 LGATGSAELPEGGASSSST 264 L ATGSAELP+G S S+ Sbjct: 6818 LAATGSAELPDGEDDSVSS 6762 Score = 26.3 bits (51), Expect(4) = 4e-24 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -1 / -3 Query: 562 NITYDAQEMHLSK 524 N +DAQEMHLSK Sbjct: 7117 NRAHDAQEMHLSK 7079 Score = 24.0 bits (46), Expect(4) = 4e-24 Identities = 10/25 (40%), Positives = 12/25 (48%) Frame = -2 / -2 Query: 639 HE*NRTRDGDRHKSQTD*LTECLSN 565 H * D +HK Q +CLSN Sbjct: 7202 HS*KTHADHTKHKCQVSYTDQCLSN 7128 Score = 105 bits (225), Expect(2) = 4e-23 Identities = 45/82 (54%), Positives = 58/82 (70%) Frame = +1 / +1 Query: 97 QSKGMRQKVMEEIFKPTDDSNLSAPSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDD 276 Q K MRQKVMEE+FKPT+DS+ SAPSPEKKVR++R SPF+KKSGSVL R ++ ST E+ Sbjct: 6592 QGKSMRQKVMEEMFKPTEDSSTSAPSPEKKVRKMRASPFHKKSGSVLQRASTASTSTEET 6771 Query: 277 EAPPSGSSAEPVAPRRTTRERK 342 E+ S+ R R+ + Sbjct: 6772 ESSSPSGSSAEPVAARPKRQTR 6837 Score = 27.2 bits (53), Expect(2) = 4e-23 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +3 / +3 Query: 525 LLRCISCASYVMF 563 LLRCISCAS +F Sbjct: 7080 LLRCISCASCALF 7118 Score = 85.8 bits (181), Expect(2) = 1e-19 Identities = 40/63 (63%), Positives = 47/63 (74%) Frame = +3 / +3 Query: 72 CHQEESASSEQRHEAESDGRNIQAY**QQPQCSFS*EEGAKDQGLPLQQEERLGSAQNGE 251 C+QEE ASS + HEAESDGRN+QAY QQ Q S S*EEGA+D+GL L QEERL A+ Sbjct: 6567 CNQEEGASSGEVHEAESDGRNVQAYRGQQHQRSIS*EEGAQDEGLSLPQEERLCLAEGLN 6746 Query: 252 HFN 260 F+ Sbjct: 6747 SFH 6755 Score = 30.4 bits (60), Expect(2) = 1e-19 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +1 / +1 Query: 268 EDDEAPPSGSSAEPVAPRRTTRER 339 E + + PSGSSAEPVA R + R Sbjct: 6766 ETESSSPSGSSAEPVAARPKRQTR 6837 Score = 55.1 bits (114), Expect(2) = 3e-07 Identities = 28/54 (51%), Positives = 33/54 (61%) Frame = -2 / -1 Query: 240 VQNRAALLVEGGVPDPSHLLLRRRSTEVAVISRLEYXXXXXXXXXXXLSWRSLP 79 +Q+RAALLVEG P +HLLLRR S AV+ RLE+ LSWR LP Sbjct: 6735 LQDRAALLVEGRGPHLAHLLLRRWSAGAAVLCRLEHFFHHFLPHGLPLSWRPLP 6574 Score = 24.4 bits (47), Expect(2) = 3e-07 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -2 / -1 Query: 585 LTECLSNQT*HTTHKRC 535 +++ L N HTTHKRC Sbjct: 7140 MSQQLMN*IEHTTHKRC 7090 Score = 29.5 bits (58), Expect(2) = 2.4 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = +2 / +2 Query: 179 RRRCEGSGTPPSTRRAARFC 238 RRRC G PSTRRAA C Sbjct: 6674 RRRCAR*GPLPSTRRAALSC 6733 Score = 25.8 bits (50), Expect(2) = 2.4 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = +2 / +2 Query: 527 AQVHLLCVVCYV 562 A++HLLCVVC + Sbjct: 7082 AEMHLLCVVCSI 7117 Score = 31.3 bits (62), Expect = 7.0 Identities = 15/22 (68%), Positives = 15/22 (68%) Frame = -1 / -3 Query: 190 APSSQEKEH*GCCHQ*A*IFLP 125 APSSQE E CC *A* FLP Sbjct: 6685 APSSQEMERWCCCPL*A*TFLP 6620
>LOC_Os04g57530:12004.t05219:unspliced-genomic shattering protein, putative, expressed| Length = 2180 Score = 34.1 bits (68), Expect = 1.0 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +1 / -1 Query: 196 IRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRRTTRERKAAV 351 +R PF ++ S S GV D APP ++A P RR++ R A + Sbjct: 524 LRRQPFFQQ*FSTHFHRCSADLGVGGDPAPPPPAAAPPTPARRSSSRRLAVM 369
>LOC_Os01g36790:12001.t03228:unspliced-genomic protein kinase, putative, expressed| Length = 4622 Score = 34.1 bits (68), Expect = 1.0 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = +2 / +2 Query: 476 WLVSRDIWLANLMYWCFAQVHLLCVVCYVWLL 571 WLVS D WL N+ + Q L+ W L Sbjct: 3146 WLVSEDTWLLNIWHMAILQRRLMSTAMVFWFL 3241
>LOC_Os03g06180:12003.t00487:unspliced-genomic expressed protein| Length = 4156 Score = 28.1 bits (55), Expect(2) = 1.1 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +3 / +2 Query: 48 CCCEAKDCCHQEE 86 CCC ++CC+Q E Sbjct: 302 CCCVCRNCCYQFE 340 Score = 27.6 bits (54), Expect(2) = 1.1 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +1 / +3 Query: 268 EDDEAPPSGSSAEPVAPRRTTRERK 342 +DD+ PSGS+A+P R ++ K Sbjct: 3426 QDDDGKPSGSTAKPEKSARVHQDSK 3500
>LOC_Os11g13990:12011.t01233:unspliced-genomic nucleoside-triphosphatase/ nucleotide binding protein, putative,| expressed Length = 9073 Score = 33.6 bits (67), Expect = 1.4 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -3 / +3 Query: 668 FFFFKQHVSGMNKTELEMVIGTSLKPIS 585 FFFF+Q +S MNKT + + +S+ P S Sbjct: 1404 FFFFEQKISKMNKTIMSVPSSSSVSPTS 1487
>LOC_Os12g13790:12012.t01246:unspliced-genomic POT family protein| Length = 4092 Score = 33.1 bits (66), Expect = 2.0 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 / +2 Query: 535 ASLVRRMLCLVAETFCELIGLRLVPITISSSVLFMPET 648 A+ RR LC V + I LRL+PI ++S+V F+ T Sbjct: 2780 ATRARRRLCTVTQVEEMKILLRLIPIWLTSAVYFVANT 2893
>LOC_Os08g36590:12008.t03398:unspliced-genomic expressed protein| Length = 2084 Score = 33.1 bits (66), Expect = 2.0 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 / -1 Query: 182 RRCEGSGTPPSTRRAARFCTEWRALQQG 265 RRC GSG P+ RR++R C R +G Sbjct: 1070 RRCHGSGRRPTRRRSSRRCRSGRRRGRG 987
>LOC_Os08g02440:12008.t00139:unspliced-genomic ATP binding protein, putative, expressed| Length = 4622 Score = 33.1 bits (66), Expect = 2.0 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +1 / -2 Query: 154 SNLSAPSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAP 318 S + P P + RR R +++ + R +T+ G APPS SA P P Sbjct: 322 SPAATPPPPCRARRRRRPRSSRRGRTGRRRAPTTAAGGPTGPAPPSAPSARPPPP 158
>LOC_Os09g28060:12009.t02484:unspliced-genomic phosphatidylinositol-4-phosphate 5-kinase, putative, expressed| Length = 2109 Score = 32.7 bits (65), Expect = 2.7 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 / -1 Query: 182 RRCEGSGTPPSTRRAARFCTEWRALQQG 265 RRC GSG P+ RR++R C R +G Sbjct: 1047 RRCRGSGHRPTRRRSSRRCRSGRRRGRG 964
>LOC_Os04g33460:12004.t03022:unspliced-genomic 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor,| putative, expressed Length = 3671 Score = 32.7 bits (65), Expect = 2.7 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +1 / -3 Query: 214 NKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRRTTRERK 342 N K G + H + S D PS S E VAP + RER+ Sbjct: 498 NSKMGGITHAREAVSCNRSGDLLFPSKSVTEQVAPTQRERERE 370
>LOC_Os01g51550:12001.t04587:unspliced-genomic peroxidase family protein| Length = 3713 Score = 32.7 bits (65), Expect = 2.7 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 / -3 Query: 223 SGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRRTTRERKAAV 351 +G +HR AS S+ + P+GS+ P A RR R +A++ Sbjct: 1104 AGCPVHREASRSSARRNPPPSPAGSTPSPSARRRRRRTPRASL 976
>LOC_Os04g35140:12004.t03185:unspliced-genomic subtilisin-like protease precursor, putative, expressed| Length = 3246 Score = 25.8 bits (50), Expect(2) = 3.5 Identities = 13/29 (44%), Positives = 13/29 (44%) Frame = +1 / -3 Query: 247 ASTSTGVEDDEAPPSGSSAEPVAPRRTTR 333 AST TG PP S AP TTR Sbjct: 316 ASTCTGAPPPAPPPRPSPTPTRAPTGTTR 230 Score = 23.5 bits (45), Expect(2) = 3.5 Identities = 10/25 (40%), Positives = 12/25 (48%) Frame = +2 / -3 Query: 179 RRRCEGSGTPPSTRRAARFCTEWRA 253 R R G PP++ A R WRA Sbjct: 388 RARPPGGSPPPASPSAPR*TRSWRA 314
>LOC_Os01g33230:12001.t02894:unspliced-genomic glycosyltransferase family 28 C-terminal domain containing protein,| expressed Length = 5835 Score = 32.2 bits (64), Expect = 3.7 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = -3 / -2 Query: 656 KQHVSGMNKTELEMVIGTSLKPISSQNVSATKHNIRRTRDAPEQSTN 516 KQH+S ++T+ E+ ++PI Q+ T+H R P Q+ N Sbjct: 2804 KQHISSAHRTDCELKNMIIVQPILYQSSYCTEH*KHSQRTCP*QAAN 2664
>LOC_Os04g56350:12004.t05106:unspliced-genomic nucleolar protein,Nop52 containing protein, expressed| Length = 2010 Score = 32.2 bits (64), Expect = 3.7 Identities = 17/64 (26%), Positives = 26/64 (40%) Frame = +1 / +1 Query: 142 PTDDSNLSAPSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPR 321 P + SP R+R SP S S +++ T +PPS ++ P +PR Sbjct: 142 PHGSARCGTSSPPSSRPRLRTSPPPTSSSSGRASSSASGTPTSRSTSPPSPPASPPASPR 321 Query: 322 RTTR 333 R Sbjct: 322 APRR 333
>LOC_Os01g73630:12001.t06642:unspliced-genomic rhoGAP, putative, expressed| Length = 1280 Score = 32.2 bits (64), Expect = 3.7 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +2 / +3 Query: 182 RRCEGSGTPPSTRRAARFCTEWR 250 RR S TP +RRAA CT WR Sbjct: 597 RRSGSSSTPACSRRAAWTCTAWR 665
>LOC_Os01g10230:12001.t00898:unspliced-genomic lachrymatory factor synthase, putative| Length = 579 Score = 32.2 bits (64), Expect = 3.7 Identities = 16/61 (26%), Positives = 27/61 (44%) Frame = +1 / -1 Query: 160 LSAPSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRRTTRER 339 L P P + R + D+P +++ ++L +A V+ E G A V PR R Sbjct: 282 LPRPQPRRARRHVPDAPGDEEEATILAAVADALAHVDAREVAVRGVEAGDVRPRGGRRRS 103 Query: 340 K 342 + Sbjct: 102 R 100
>LOC_Os06g38970:12006.t03595:unspliced-genomic ATP binding protein, putative, expressed| Length = 4677 Score = 27.6 bits (54), Expect(2) = 3.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +2 / +3 Query: 188 CEGSGTPPSTRRAARFCTEWRA 253 C + +P S RRA R T WR+ Sbjct: 939 CRATSSPGSCRRARRAPTRWRS 1004 Score = 26.3 bits (51), Expect(2) = 3.8 Identities = 6/16 (37%), Positives = 13/16 (81%) Frame = +2 / +3 Query: 530 QVHLLCVVCYVWLLRH 577 ++HLLC++C+ ++ H Sbjct: 1452 EMHLLCLICFYFVFLH 1499
>LOC_Os06g11420:12006.t01019:unspliced-genomic SNW domain-containing protein 1, putative| Length = 1623 Score = 24.9 bits (48), Expect(2) = 5.0 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = +1 / -3 Query: 280 APPSGSSAEPVAPRRTTRE 336 +PPS + P+A RR R+ Sbjct: 193 SPPSSEARAPIASRRAARD 137 Score = 24.0 bits (46), Expect(2) = 5.0 Identities = 7/21 (33%), Positives = 11/21 (52%) Frame = +2 / -2 Query: 185 RCEGSGTPPSTRRAARFCTEW 247 RC S +PP ++ +C W Sbjct: 284 RCSPSPSPPRRPMSSGYCATW 222
>LOC_Os02g42590:12002.t03844:unspliced-genomic signal transducer, putative, expressed| Length = 5855 Score = 31.8 bits (63), Expect = 5.0 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3 / -1 Query: 245 ILCRTEPLFLLKGESLILRTFFSGEGALRLLSSVGLNISSIT 120 I CR+ +L+ L +RTF S E ++ LS GLN +T Sbjct: 3788 ISCRSIQSTILRSCILQIRTFLSREPLMKYLSLTGLNWMQVT 3663
>LOC_Os01g44030:12001.t03915:unspliced-genomic hypothetical protein| Length = 1594 Score = 31.8 bits (63), Expect = 5.0 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +3 / +1 Query: 51 CCEAKDCCHQEESASSEQRHE 113 CC +CC+QE S ++R+E Sbjct: 1492 CCTCTNCCYQERVQSGDRRYE 1554
>LOC_Os08g40080:12008.t03739:unspliced-genomic expressed protein| Length = 647 Score = 31.8 bits (63), Expect = 5.1 Identities = 18/64 (28%), Positives = 26/64 (40%) Frame = +1 / -2 Query: 142 PTDDSNLSAPSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPR 321 PT S+ + P P RR + + + S R AS+ PP ++A P P Sbjct: 241 PTRSSSPARPPPRPSRRRAPPTSASSRRHSRRRRTASSPRAAAAPPPPPPPAAAAPPTPG 62 Query: 322 RTTR 333 R R Sbjct: 61 RRLR 50
>LOC_Os06g47680:12006.t04454:unspliced-genomic F-box domain containing protein| Length = 1305 Score = 31.8 bits (63), Expect = 5.1 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 / +2 Query: 185 RCEGSGTPPSTRRAARFCTEWRA 253 RC GS PP RRA+ WRA Sbjct: 161 RCSGSRAPPCPRRASSASRAWRA 229
>LOC_Os02g07320:12002.t00629:unspliced-genomic conserved hypothetical protein| Length = 1756 Score = 31.8 bits (63), Expect = 5.1 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -2 / -1 Query: 372 TPGSDVDYRRLPLPCCPSRCNWLSRAAGGR 283 +P S RR PLP C W +RA GGR Sbjct: 571 SPPSAPGGRRSPLPPPEKMCPWAARAPGGR 482
>LOC_Os04g44700:12004.t04009:unspliced-genomic signal transducer, putative, expressed| Length = 5965 Score = 31.3 bits (62), Expect = 6.9 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -3 / -1 Query: 251 LAILCRTEPLFLLKGESLILRTFFSGEGALRLLSSVGLNISSIT 120 + I CR+ + + L +RTF S E ++ LSS GLN +T Sbjct: 3865 VTISCRSFQSTISRPGMLHMRTFSSREPLMKYLSSTGLNWMHVT 3734
>LOC_Os11g38860:12011.t03429:unspliced-genomic methyltransferase, putative, expressed| Length = 5664 Score = 31.3 bits (62), Expect = 7.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -2 / -1 Query: 372 TPGSDVDYRRLPLPCCPSRCNWLSRAAGGR 283 TP S +R P PC P+ C W + + GR Sbjct: 2409 TPRSAAARQRGPPPCAPTPCGWSAS*SAGR 2320
>LOC_Os10g30910:12010.t02422:unspliced-genomic expressed protein| Length = 9689 Score = 31.3 bits (62), Expect = 7.0 Identities = 14/53 (26%), Positives = 23/53 (43%) Frame = +1 / -3 Query: 172 SPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRRTT 330 +P RDS ++GS R ++T++ PP+ + P P TT Sbjct: 393 NPNPTATASRDSRAPNRAGSSSRRASATASAARSSPPPPAAPRSPPPPPPTTT 235
>LOC_Os10g25630:12010.t01980:unspliced-genomic expressed protein| Length = 1143 Score = 31.3 bits (62), Expect = 7.0 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = +1 / -2 Query: 241 RMASTSTGVEDDEAPPSGSSAEPVAPRRTTRER 339 R + +T APPS S EP APR TR R Sbjct: 620 RSMAATTPSASSAAPPS*SC*EPAAPRHRTRPR 522
>LOC_Os08g38270:12008.t03563:unspliced-genomic fasciclin-like arabinogalactan protein 10 precursor, putative,| expressed Length = 1183 Score = 31.3 bits (62), Expect = 7.0 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 / +1 Query: 166 APSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPS 291 A SP + D+P KS HR + + G D+APP+ Sbjct: 607 AESPAPAPAPVADAPKASKSKKASHRHVADAPGPAGDDAPPA 732
>LOC_Os08g06200:12008.t00510:unspliced-genomic stomatin-like protein 2, putative, expressed| Length = 4183 Score = 31.3 bits (62), Expect = 7.0 Identities = 13/49 (26%), Positives = 25/49 (51%) Frame = +2 / +2 Query: 401 CRNQVTMMTSLKMTRLLGSTAQTLQWLVSRDIWLANLMYWCFAQVHLLC 547 C T++ ++ + R +TA+ + W +S +WL L + F+ LC Sbjct: 1175 CNMCGTLLVAVVVLRRCSNTARLVVWFISDFVWLYKLTSFFFSHP*QLC 1321
>LOC_Os07g38430:12007.t03508:unspliced-genomic expressed protein| Length = 2571 Score = 31.3 bits (62), Expect = 7.0 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 208 PFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRRTTRE 336 PF+++ G +A+ + A P+G +P PRR RE Sbjct: 65 PFHRRRGRAAADVAAAAGAGAAVPAVPAGEGGDPAQPRRLVRE 193
>LOC_Os06g13060:12006.t01181:unspliced-genomic chaperone protein dnaJ 16, putative, expressed| Length = 4169 Score = 31.3 bits (62), Expect = 7.0 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +2 / +2 Query: 179 RRRCEGSGTPPSTRRAARFCTEWRALQQG*KMMRLLPPAALL 304 R RC G P TRR+ WR+ + ++ PP ++L Sbjct: 77 RTRCSAWGATPPTRRSRAPSAAWRSSEHSPPHPQIRPPHSIL 202
>LOC_Os05g49150:12005.t04348:unspliced-genomic eukaryotic translation initiation factor 3 subunit 7, putative,| expressed Length = 2142 Score = 31.3 bits (62), Expect = 7.0 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = -1 / -1 Query: 304 QQSCRREEPHHLLPLLKCSP 245 QQ R PHHL LL CSP Sbjct: 1857 QQLLRSSRPHHLQKLLHCSP 1798
>LOC_Os05g48980:12005.t04332:unspliced-genomic ras-related protein Rab11B, putative, expressed| Length = 1756 Score = 31.3 bits (62), Expect = 7.0 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +1 / +2 Query: 223 SGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRRTTRERK 342 SGS AS +T +PPS SS+ P A TTR + Sbjct: 263 SGSRTCCPASRATSSASSPSPPSASSSPPAASTSTTRSSR 382
>LOC_Os05g05180:12005.t00408:unspliced-genomic indole-3-acetic acid-amido synthetase GH3.6, putative, expressed| Length = 2269 Score = 31.3 bits (62), Expect = 7.0 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +1 / +3 Query: 253 TSTGVEDDEAPPSGSSAEPVAPRRTTRERKAA 348 TS G A P+ SSA P +PRR T ++ Sbjct: 174 TSAGTSPPTAAPTTSSAPPTSPRRPTNSASSS 269
>LOC_Os04g58960:12004.t05356:unspliced-genomic ran GTPase binding protein, putative, expressed| Length = 7633 Score = 31.3 bits (62), Expect = 7.0 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 / -3 Query: 339 PLPCCPSRCNWLSRAAGGRSLIIFYPC 259 P C SRC W+ AA SL++F PC Sbjct: 6722 PGRCNRSRCLWVLEAAWLISLLVFSPC 6642
>LOC_Os01g67570:12001.t06114:unspliced-genomic PDE312, putative, expressed| Length = 4465 Score = 31.3 bits (62), Expect = 7.0 Identities = 14/54 (25%), Positives = 25/54 (46%) Frame = +1 / +2 Query: 163 SAPSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRR 324 S+P PE++ R +R P ++ S S + ++ +PP + P RR Sbjct: 8 SSPKPEQEWRPLRPPPPSRTSASAPSPSSGAASAASPSPSPPPAPTRPPRMTRR 169
>LOC_Os06g02850:12006.t00178:unspliced-genomic expressed protein| Length = 2698 Score = 29.0 bits (57), Expect(2) = 7.8 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 / -1 Query: 179 RRRCEGSGTPPSTRRAARFCT 241 RRR G+ +PP RR R CT Sbjct: 1159 RRRTPGTASPPCRRRRRRRCT 1097 Score = 23.1 bits (44), Expect(2) = 7.8 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +1 / -2 Query: 238 HRMASTSTGVEDDEAPPSGSSA 303 HR+ + + VE+DE G +A Sbjct: 624 HRLPAGAVDVEEDEVAEEGDTA 559
>LOC_Os07g46380:12007.t04274:unspliced-genomic glycosyltransferase, putative, expressed| Length = 1955 Score = 26.3 bits (51), Expect(2) = 7.9 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 / +2 Query: 247 ASTSTGVEDDEAPPSGSSAEPVAPRRTT 330 AST PP+ +SA +PRR+T Sbjct: 1472 ASTPPATPCSPTPPASASAAGTSPRRST 1555 Score = 25.4 bits (49), Expect(2) = 7.9 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +2 / +2 Query: 185 RCEGSGTPPSTRRAARFCT 241 RC PP+ RR A CT Sbjct: 575 RCGSVACPPAARRGATSCT 631
>LOC_Os03g60340:12003.t05272:unspliced-genomic expressed protein| Length = 3720 Score = 24.9 bits (48), Expect(2) = 8.4 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = -2 / -3 Query: 348 RRLPLPCCP 322 RRLPL CCP Sbjct: 244 RRLPLHCCP 218 Score = 23.1 bits (44), Expect(2) = 8.4 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = -2 / -2 Query: 330 CCPSRCNWLSRAAGGR 283 C P R W R GGR Sbjct: 161 CVPGRRRWRLRRRGGR 114
>LOC_Os07g10850:12007.t00959:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12538 Score = 29.0 bits (57), Expect(2) = 8.7 Identities = 19/71 (26%), Positives = 27/71 (38%) Frame = +1 / +3 Query: 130 EIFKPTDDSNLSAPSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEP 309 E +P+ AP P+ R F + HR AS+ + V +APP Sbjct: 2022 EEIEPSPFIQGEAPPPKHFASHRRQPSFADLICAPGHRRASSPSAVNPGDAPPPPPRRGR 2201 Query: 310 VAPRRTTRERK 342 P R R R+ Sbjct: 2202 AIPARAGRRRE 2234 Score = 24.9 bits (48), Expect(2) = 8.7 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = +3 / +2 Query: 471 CSG*CLETFGW 503 C G*CL T GW Sbjct: 2768 CQG*CLGTVGW 2800
>LOC_Os05g33940:12005.t02989:unspliced-genomic hsr203J, putative, expressed| Length = 1807 Score = 25.8 bits (50), Expect(2) = 8.9 Identities = 11/28 (39%), Positives = 12/28 (42%) Frame = +2 / -3 Query: 182 RRCEGSGTPPSTRRAARFCTEWRALQQG 265 R C G TP A C+ WRA G Sbjct: 1055 RACRG*RTPSRASAPAPTCSGWRARTPG 972 Score = 22.1 bits (42), Expect(2) = 8.9 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +1 / -2 Query: 310 VAPRRTTRERKAAV 351 ++P R TRE+ AAV Sbjct: 873 LSPMRNTREKSAAV 832
>LOC_Os12g42960:12012.t03969:unspliced-genomic expressed protein| Length = 2617 Score = 30.9 bits (61), Expect = 9.6 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +2 / +3 Query: 179 RRRCEGSGTPPSTRRAARFC 238 RRRC S PP R AAR C Sbjct: 486 RRRCCASSRPPRKRTAARLC 545
>LOC_Os12g37730:12012.t03454:unspliced-genomic hypothetical protein| Length = 614 Score = 30.9 bits (61), Expect = 9.6 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -2 / -3 Query: 351 YRRLPLPCCPSRCNWLSRAA 292 +RR PLP CPS C LS AA Sbjct: 360 HRRPPLPPCPS*CESLSAAA 301
>LOC_Os10g36320:12010.t02915:unspliced-genomic cytochrome P450 94A1, putative| Length = 796 Score = 30.9 bits (61), Expect = 9.6 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -2 / +3 Query: 237 QNRAALLVEGGVPDPSHLLLRRRSTEVAVISR 142 Q RA + G+P P HL LRRR+ VA R Sbjct: 96 QGRARRVHARGLPRPWHLQLRRRAVAVAAEGR 191
>LOC_Os10g35020:12010.t02797:unspliced-genomic glycosyltransferase, putative, expressed| Length = 2629 Score = 30.9 bits (61), Expect = 9.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 / -2 Query: 220 KSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRR 324 + G+++H A+T DD+ S + PVA RR Sbjct: 1776 RHGALVHERAATGGAAGDDQEAGSAADVPPVAARR 1672
>LOC_Os09g22120:12009.t01946:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 4894 Score = 30.9 bits (61), Expect = 9.6 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +2 / +3 Query: 419 MMTSLKMTRLLGSTAQTLQWLVSRDIWLAN 508 MMT ++M + G+ TLQ L +R +W ++ Sbjct: 1662 MMTMIQMMAIFGNLGNTLQHLTTRMLWYSS 1751
>LOC_Os09g08570:12009.t00651:unspliced-genomic expressed protein| Length = 903 Score = 30.9 bits (61), Expect = 9.6 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = +1 / -2 Query: 154 SNLSAPSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRRT 327 SN A S ++ R R SP + AST+T +PP+ +S E A +T Sbjct: 569 SNSMATSRDRGRARQRQSPSRHVATQARGASASTATQTASKRSPPASASRESSAALKT 396
>LOC_Os08g19870:12008.t01805:unspliced-genomic transposon protein, putative, Ac/Ds sub-class| Length = 2462 Score = 30.9 bits (61), Expect = 9.6 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +2 / +1 Query: 506 NLMYWCFAQVHLLCVVCYVWL 568 +L+Y+C QVH C C W+ Sbjct: 880 SLLYFCIKQVHTRCFYCV*WM 942
>LOC_Os08g01430:12008.t00042:unspliced-genomic F-box domain containing protein, expressed| Length = 3342 Score = 30.9 bits (61), Expect = 9.6 Identities = 20/69 (28%), Positives = 25/69 (36%) Frame = +1 / +3 Query: 142 PTDDSNLSAPSPEKKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPR 321 PT S+PSP SP + GS +S APPS + P A Sbjct: 171 PTSARATSSPSPPPPAASATPSPPPTRRGSPSAAASSPPPPTSSPGAPPSPTPPSPSAAS 350 Query: 322 RTTRERKAA 348 T R +A Sbjct: 351 STPPPRSSA 377
>LOC_Os07g37320:12007.t03401:unspliced-genomic sugar carrier protein C, putative, expressed| Length = 2713 Score = 30.9 bits (61), Expect = 9.6 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +1 / +2 Query: 268 EDDEAPPSGSSAEPVAPRRTTR 333 E AP SGS A P +PRRT R Sbjct: 1955 EASSAPSSGSPAWPTSPRRTRR 2020
>LOC_Os07g26530:12007.t02349:unspliced-genomic hypothetical protein| Length = 442 Score = 30.9 bits (61), Expect = 9.6 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +2 / -3 Query: 521 CFAQVHLLCVVCYVWL 568 C + +LCVVCY+WL Sbjct: 200 CLFLLPILCVVCYIWL 153
>LOC_Os06g33720:12006.t03069:unspliced-genomic disulfide oxidoreductase/ monooxygenase/ oxidoreductase, putative,| expressed Length = 1688 Score = 30.9 bits (61), Expect = 9.6 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +2 / -1 Query: 182 RRCEGSGTPPSTRRAARFCTEWRALQQG*KMMRLLPP 292 RRC G+G STR + R C RA ++ + R PP Sbjct: 956 RRCPGTGRSRSTRCSRRRCRRRRASRRRTRRPRRPPP 846
>LOC_Os05g50140:12005.t04446:unspliced-genomic auxin efflux carrier component 3b, putative, expressed| Length = 2868 Score = 30.9 bits (61), Expect = 9.6 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +2 / +1 Query: 182 RRCEGSGTPPSTRRAARFCTEWRA 253 RRC G PP RRA R WR+ Sbjct: 754 RRCRGGPPPPPPRRARRT*PAWRS 825
>LOC_Os05g48700:12005.t04304:unspliced-genomic gibberellin 2-beta-dioxygenase, putative, expressed| Length = 2194 Score = 30.9 bits (61), Expect = 9.6 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 / -1 Query: 283 PPSGSSAEPVAPRRTTRERK 342 PP SA P APRR TR R+ Sbjct: 535 PPPPPSAPPAAPRRRTRRRR 476
>LOC_Os04g01860:12004.t00083:unspliced-genomic lectin-like protein kinase, putative| Length = 654 Score = 30.9 bits (61), Expect = 9.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 / -2 Query: 223 SGSVLHRMASTSTGVEDDEAPPSG 294 S S H++ASTS VE PPSG Sbjct: 608 SSSHSHKLASTSLPVESTSTPPSG 537
>LOC_Os02g32970:12002.t02940:unspliced-genomic catalytic/ hydrolase, putative, expressed| Length = 4254 Score = 30.9 bits (61), Expect = 9.6 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +1 / +2 Query: 241 RMASTSTGVEDDEAPPSGSSAEPVAPRRTTRERKA 345 R+ASTS+ P + P APRR R R++ Sbjct: 197 RVASTSSSKYQWRTPARSGTGRPTAPRRRRRRRRS 301
>LOC_Os01g59050:12001.t05297:unspliced-genomic cytochrome P450 94A1, putative| Length = 1553 Score = 30.9 bits (61), Expect = 9.6 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -2 / +3 Query: 210 GGVPDPSHLLLRRRSTEVAVISR 142 GG+P P HL LRRR VA R Sbjct: 354 GGLPRPRHLQLRRRPVAVAAEGR 422
>LOC_Os01g54590:12001.t04875:unspliced-genomic ras-related protein RIC2, putative, expressed| Length = 3476 Score = 30.9 bits (61), Expect = 9.6 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +1 / +2 Query: 250 STSTGVEDDEAPPSGSSAEPVAPRRTTRERK 342 S T +PPSGSS+ P A R T R + Sbjct: 236 SPRTSSASSPSPPSGSSSPPAASRSTARSSR 328
>LOC_Os01g40160:12001.t03542:unspliced-genomic F-box domain containing protein| Length = 2635 Score = 30.9 bits (61), Expect = 9.6 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +1 / -1 Query: 181 KKVRRIRDSPFNKKSGSVLHRMASTSTGVEDDEAPPSGSSAEPVAPRRTTR 333 + VRR R ++ SV+ +A TS+ E APP +SA A RR R Sbjct: 676 RPVRRRRRRAPSRICASVVSAVARTSSCTELHRAPPPPASAAAPAARRRWR 524 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 235,024,358 Number of extensions: 3584027 Number of successful extensions: 19028 Number of sequences better than 10.0: 59 Length of query: 223 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 175 Effective length of database: 52,912,542 Effective search space: 9259694850 Effective search space used: 9259694850 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)