| Clone Name | FLbaf11c01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK069114:Os01g0743400 | 669 | 0.0 | 2 | AK059177:Os01g0743400 | 652 | 0.0 | 3 | AK065545:Os04g0579700 | 33 | 0.41 | 4 | AK121236:Os06g0712800 | 30 | 5.9 |
|---|
>AK069114:Os01g0743400 | Length = 399 Score = 669 bits (1727), Expect = 0.0 Identities = 340/399 (85%), Positives = 358/399 (89%), Gaps = 1/399 (0%) Frame = +1 Query: 94 MSRALLSHILHRPP-LLASRSGVRGGALPSRLRALRLNCSGXXXXXXXXXXXXXXXRKKR 270 MSR LLSHILHRPP LLASR G RGGALPSRLR LRLNCS RKKR Sbjct: 1 MSRTLLSHILHRPPPLLASRGGGRGGALPSRLRTLRLNCSVAEATASGDEAPAPPARKKR 60 Query: 271 VVSGVQPTGMVHLGNYLGAIKNWVALQDLYETFFFIVDLHAITLPYDAPELSKATRSTAA 450 VVSGVQPTG+VHLGNYLGAIKNWV+LQDLYET FFIVDLHAITLPY+AP+LSKATRSTAA Sbjct: 61 VVSGVQPTGLVHLGNYLGAIKNWVSLQDLYETLFFIVDLHAITLPYEAPQLSKATRSTAA 120 Query: 451 IYLACGIDSSKASIFVQSHVRAHIELMWLLSSSTPIGWLNKMIQFKEKSRKAGNENVGVA 630 IYLACGIDSSKASIFVQSHVRAH+ELMWLLSSSTPIGWLN+MIQFKEKSRKAG+ENVGVA Sbjct: 121 IYLACGIDSSKASIFVQSHVRAHVELMWLLSSSTPIGWLNRMIQFKEKSRKAGDENVGVA 180 Query: 631 LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREISERVNNLYXXXXXXXXXXXXXSLF 810 LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREI+ERVNNLY SLF Sbjct: 181 LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREIAERVNNLYGGRKWKKMGGRGGSLF 240 Query: 811 KVPEALIPPAGARVMSLTDGLSKMSKSAPSDLSRINLLDPKDVIVNKIKRCKTDSLPGLE 990 KVPEALIPPAGARVMSLTDGLSKMSKSAPSD SRINLLDPKDVI+NKIKRCKTDS PGLE Sbjct: 241 KVPEALIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIMNKIKRCKTDSFPGLE 300 Query: 991 FDNPERPECSNLLSVYQIITGKTKEEVVSECQDMNWGTFKATLTDALIDHLQPIQVRYEE 1170 FDNPERPEC+NLLS+YQIITGKTKEEV+ EC++MNWG+FK TLTDALIDHLQPIQVRYEE Sbjct: 301 FDNPERPECNNLLSIYQIITGKTKEEVIRECENMNWGSFKTTLTDALIDHLQPIQVRYEE 360 Query: 1171 IMSDPGYLDTVLLDGAGKASEIADATLNNVYQAMGFLRR 1287 IMSDPGYLD VLL+G+GKA+EIAD TLNNVYQAMGFLRR Sbjct: 361 IMSDPGYLDGVLLEGSGKAAEIADITLNNVYQAMGFLRR 399
>AK059177:Os01g0743400 | Length = 393 Score = 652 bits (1683), Expect = 0.0 Identities = 334/399 (83%), Positives = 352/399 (88%), Gaps = 1/399 (0%) Frame = +1 Query: 94 MSRALLSHILHRPP-LLASRSGVRGGALPSRLRALRLNCSGXXXXXXXXXXXXXXXRKKR 270 MSR LLSHILHRPP LLASR G RGGALPSRLR LRLNCS RKKR Sbjct: 1 MSRTLLSHILHRPPPLLASRGGGRGGALPSRLRTLRLNCSVAEATASGDEAPAPPARKKR 60 Query: 271 VVSGVQPTGMVHLGNYLGAIKNWVALQDLYETFFFIVDLHAITLPYDAPELSKATRSTAA 450 VVSGVQPTG+VHLGNYLGAIKNWV+LQDLYET FFIVDLHAITLPY+AP+LSKATRSTAA Sbjct: 61 VVSGVQPTGLVHLGNYLGAIKNWVSLQDLYETLFFIVDLHAITLPYEAPQLSKATRSTAA 120 Query: 451 IYLACGIDSSKASIFVQSHVRAHIELMWLLSSSTPIGWLNKMIQFKEKSRKAGNENVGVA 630 IYLACGIDSSK SHVRAH+ELMWLLSSSTPIGWLN+MIQFKEKSRKAG+ENVGVA Sbjct: 121 IYLACGIDSSK------SHVRAHVELMWLLSSSTPIGWLNRMIQFKEKSRKAGDENVGVA 174 Query: 631 LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREISERVNNLYXXXXXXXXXXXXXSLF 810 LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREI+ERVNNLY SLF Sbjct: 175 LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREIAERVNNLYGGRKWKKMGGRGGSLF 234 Query: 811 KVPEALIPPAGARVMSLTDGLSKMSKSAPSDLSRINLLDPKDVIVNKIKRCKTDSLPGLE 990 KVPEALIPPAGARVMSLTDGLSKMSKSAPSD SRINLLDPKDVI+NKIKRCKTDS PGLE Sbjct: 235 KVPEALIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIMNKIKRCKTDSFPGLE 294 Query: 991 FDNPERPECSNLLSVYQIITGKTKEEVVSECQDMNWGTFKATLTDALIDHLQPIQVRYEE 1170 FDNPERPEC+NLLS+YQIITGKTKEEV+ EC++MNWG+FK TLTDALIDHLQPIQVRYEE Sbjct: 295 FDNPERPECNNLLSIYQIITGKTKEEVIRECENMNWGSFKTTLTDALIDHLQPIQVRYEE 354 Query: 1171 IMSDPGYLDTVLLDGAGKASEIADATLNNVYQAMGFLRR 1287 IMSDPGYLD VLL+G+GKA+EIAD TLNNVYQAMGFLRR Sbjct: 355 IMSDPGYLDGVLLEGSGKAAEIADITLNNVYQAMGFLRR 393
>AK065545:Os04g0579700 | Length = 533 Score = 33.5 bits (75), Expect = 0.41 Identities = 39/181 (21%), Positives = 65/181 (35%), Gaps = 2/181 (1%) Frame = +1 Query: 136 LLASRSGVRGGALPSRLR--ALRLNCSGXXXXXXXXXXXXXXXRKKRVVSGVQPTGMVHL 309 +L S RGGA+ LR +L C+G + V + +H Sbjct: 311 MLRENSTSRGGAIGGDLRKESLYSACNGCLRLLHEQFEMAAGGDQSEVAQIARQADNLHW 370 Query: 310 GNYLGAIKNWVALQDLYETFFFIVDLHAITLPYDAPELSKATRSTAAIYLACGIDSSKAS 489 L + +D T+ ++L + A + +R TA +++ G K Sbjct: 371 --MLDILVERQIAEDFLRTWAMQIELAELHGKVPAIHRYEVSRVTARLFVGVG----KGQ 424 Query: 490 IFVQSHVRAHIELMWLLSSSTPIGWLNKMIQFKEKSRKAGNENVGVALLTYPVLMASDIL 669 I V VR + WL GW+ + K R + + +LT P+ +IL Sbjct: 425 ILVSKEVRCQLLSTWLEPFYEDFGWMRRAC--KGLDRHLIEDGLANTILTLPLATQQEIL 482 Query: 670 L 672 L Sbjct: 483 L 483
>AK121236:Os06g0712800 | Length = 547 Score = 29.6 bits (65), Expect = 5.9 Identities = 28/78 (35%), Positives = 33/78 (42%) Frame = -1 Query: 258 RRGSRRLIGWGGSFSPXXXXXXXXXAGRQRSSSDATPRREERRAVEDVGEERAAHGVGSR 79 +RG RR G GG GR RS + RRE R A D EE+ HGV Sbjct: 30 QRGQRRRGGGGGD---DWSAPRPRRGGRGRSRA----RREPRAAPADAEEEQIDHGVDG- 81 Query: 78 CSALLRIWLRDSGWTKEG 25 A LR ++ G EG Sbjct: 82 -GASLRREAQEEGQIGEG 98 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 41,989,594 Number of extensions: 928155 Number of successful extensions: 2484 Number of sequences better than 10.0: 4 Number of HSP's gapped: 2478 Number of HSP's successfully gapped: 4 Length of query: 506 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 401 Effective length of database: 11,195,550 Effective search space: 4489415550 Effective search space used: 4489415550 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)