ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf11c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK069114:Os01g0743400 669 0.0
2AK059177:Os01g0743400 652 0.0
3AK065545:Os04g0579700 33 0.41
4AK121236:Os06g0712800 30 5.9

>AK069114:Os01g0743400 |
          Length = 399
 Score =  669 bits (1727), Expect = 0.0
 Identities = 340/399 (85%), Positives = 358/399 (89%), Gaps = 1/399 (0%)
 Frame = +1

Query: 94   MSRALLSHILHRPP-LLASRSGVRGGALPSRLRALRLNCSGXXXXXXXXXXXXXXXRKKR 270
            MSR LLSHILHRPP LLASR G RGGALPSRLR LRLNCS                RKKR
Sbjct: 1    MSRTLLSHILHRPPPLLASRGGGRGGALPSRLRTLRLNCSVAEATASGDEAPAPPARKKR 60

Query: 271  VVSGVQPTGMVHLGNYLGAIKNWVALQDLYETFFFIVDLHAITLPYDAPELSKATRSTAA 450
            VVSGVQPTG+VHLGNYLGAIKNWV+LQDLYET FFIVDLHAITLPY+AP+LSKATRSTAA
Sbjct: 61   VVSGVQPTGLVHLGNYLGAIKNWVSLQDLYETLFFIVDLHAITLPYEAPQLSKATRSTAA 120

Query: 451  IYLACGIDSSKASIFVQSHVRAHIELMWLLSSSTPIGWLNKMIQFKEKSRKAGNENVGVA 630
            IYLACGIDSSKASIFVQSHVRAH+ELMWLLSSSTPIGWLN+MIQFKEKSRKAG+ENVGVA
Sbjct: 121  IYLACGIDSSKASIFVQSHVRAHVELMWLLSSSTPIGWLNRMIQFKEKSRKAGDENVGVA 180

Query: 631  LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREISERVNNLYXXXXXXXXXXXXXSLF 810
            LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREI+ERVNNLY             SLF
Sbjct: 181  LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREIAERVNNLYGGRKWKKMGGRGGSLF 240

Query: 811  KVPEALIPPAGARVMSLTDGLSKMSKSAPSDLSRINLLDPKDVIVNKIKRCKTDSLPGLE 990
            KVPEALIPPAGARVMSLTDGLSKMSKSAPSD SRINLLDPKDVI+NKIKRCKTDS PGLE
Sbjct: 241  KVPEALIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIMNKIKRCKTDSFPGLE 300

Query: 991  FDNPERPECSNLLSVYQIITGKTKEEVVSECQDMNWGTFKATLTDALIDHLQPIQVRYEE 1170
            FDNPERPEC+NLLS+YQIITGKTKEEV+ EC++MNWG+FK TLTDALIDHLQPIQVRYEE
Sbjct: 301  FDNPERPECNNLLSIYQIITGKTKEEVIRECENMNWGSFKTTLTDALIDHLQPIQVRYEE 360

Query: 1171 IMSDPGYLDTVLLDGAGKASEIADATLNNVYQAMGFLRR 1287
            IMSDPGYLD VLL+G+GKA+EIAD TLNNVYQAMGFLRR
Sbjct: 361  IMSDPGYLDGVLLEGSGKAAEIADITLNNVYQAMGFLRR 399



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>AK059177:Os01g0743400 |
          Length = 393

 Score =  652 bits (1683), Expect = 0.0
 Identities = 334/399 (83%), Positives = 352/399 (88%), Gaps = 1/399 (0%)
 Frame = +1

Query: 94   MSRALLSHILHRPP-LLASRSGVRGGALPSRLRALRLNCSGXXXXXXXXXXXXXXXRKKR 270
            MSR LLSHILHRPP LLASR G RGGALPSRLR LRLNCS                RKKR
Sbjct: 1    MSRTLLSHILHRPPPLLASRGGGRGGALPSRLRTLRLNCSVAEATASGDEAPAPPARKKR 60

Query: 271  VVSGVQPTGMVHLGNYLGAIKNWVALQDLYETFFFIVDLHAITLPYDAPELSKATRSTAA 450
            VVSGVQPTG+VHLGNYLGAIKNWV+LQDLYET FFIVDLHAITLPY+AP+LSKATRSTAA
Sbjct: 61   VVSGVQPTGLVHLGNYLGAIKNWVSLQDLYETLFFIVDLHAITLPYEAPQLSKATRSTAA 120

Query: 451  IYLACGIDSSKASIFVQSHVRAHIELMWLLSSSTPIGWLNKMIQFKEKSRKAGNENVGVA 630
            IYLACGIDSSK      SHVRAH+ELMWLLSSSTPIGWLN+MIQFKEKSRKAG+ENVGVA
Sbjct: 121  IYLACGIDSSK------SHVRAHVELMWLLSSSTPIGWLNRMIQFKEKSRKAGDENVGVA 174

Query: 631  LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREISERVNNLYXXXXXXXXXXXXXSLF 810
            LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREI+ERVNNLY             SLF
Sbjct: 175  LLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREIAERVNNLYGGRKWKKMGGRGGSLF 234

Query: 811  KVPEALIPPAGARVMSLTDGLSKMSKSAPSDLSRINLLDPKDVIVNKIKRCKTDSLPGLE 990
            KVPEALIPPAGARVMSLTDGLSKMSKSAPSD SRINLLDPKDVI+NKIKRCKTDS PGLE
Sbjct: 235  KVPEALIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIMNKIKRCKTDSFPGLE 294

Query: 991  FDNPERPECSNLLSVYQIITGKTKEEVVSECQDMNWGTFKATLTDALIDHLQPIQVRYEE 1170
            FDNPERPEC+NLLS+YQIITGKTKEEV+ EC++MNWG+FK TLTDALIDHLQPIQVRYEE
Sbjct: 295  FDNPERPECNNLLSIYQIITGKTKEEVIRECENMNWGSFKTTLTDALIDHLQPIQVRYEE 354

Query: 1171 IMSDPGYLDTVLLDGAGKASEIADATLNNVYQAMGFLRR 1287
            IMSDPGYLD VLL+G+GKA+EIAD TLNNVYQAMGFLRR
Sbjct: 355  IMSDPGYLDGVLLEGSGKAAEIADITLNNVYQAMGFLRR 393



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>AK065545:Os04g0579700 |
          Length = 533

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 39/181 (21%), Positives = 65/181 (35%), Gaps = 2/181 (1%)
 Frame = +1

Query: 136 LLASRSGVRGGALPSRLR--ALRLNCSGXXXXXXXXXXXXXXXRKKRVVSGVQPTGMVHL 309
           +L   S  RGGA+   LR  +L   C+G                +  V    +    +H 
Sbjct: 311 MLRENSTSRGGAIGGDLRKESLYSACNGCLRLLHEQFEMAAGGDQSEVAQIARQADNLHW 370

Query: 310 GNYLGAIKNWVALQDLYETFFFIVDLHAITLPYDAPELSKATRSTAAIYLACGIDSSKAS 489
              L  +      +D   T+   ++L  +     A    + +R TA +++  G    K  
Sbjct: 371 --MLDILVERQIAEDFLRTWAMQIELAELHGKVPAIHRYEVSRVTARLFVGVG----KGQ 424

Query: 490 IFVQSHVRAHIELMWLLSSSTPIGWLNKMIQFKEKSRKAGNENVGVALLTYPVLMASDIL 669
           I V   VR  +   WL       GW+ +    K   R    + +   +LT P+    +IL
Sbjct: 425 ILVSKEVRCQLLSTWLEPFYEDFGWMRRAC--KGLDRHLIEDGLANTILTLPLATQQEIL 482

Query: 670 L 672
           L
Sbjct: 483 L 483



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>AK121236:Os06g0712800 |
          Length = 547

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 28/78 (35%), Positives = 33/78 (42%)
 Frame = -1

Query: 258 RRGSRRLIGWGGSFSPXXXXXXXXXAGRQRSSSDATPRREERRAVEDVGEERAAHGVGSR 79
           +RG RR  G GG              GR RS +    RRE R A  D  EE+  HGV   
Sbjct: 30  QRGQRRRGGGGGD---DWSAPRPRRGGRGRSRA----RREPRAAPADAEEEQIDHGVDG- 81

Query: 78  CSALLRIWLRDSGWTKEG 25
             A LR   ++ G   EG
Sbjct: 82  -GASLRREAQEEGQIGEG 98


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 41,989,594
Number of extensions: 928155
Number of successful extensions: 2484
Number of sequences better than 10.0: 4
Number of HSP's gapped: 2478
Number of HSP's successfully gapped: 4
Length of query: 506
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 401
Effective length of database: 11,195,550
Effective search space: 4489415550
Effective search space used: 4489415550
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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