>Q695T9:RHBL2_TOXGO Rhomboid-like protease 2 - Toxoplasma gondii|
          Length = 283
 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
 Frame = +3

Query: 177 GSSPRKQDKGKVPAPL---YPQ--HEGER-EWTPWLVPSILVAN----ITVFTIAMYYNN 326
           GSS  + + G+  +PL   +P     GE   W  WL P I + +    I+   IA+Y  +
Sbjct: 17  GSSALEGEVGQGGSPLPLFFPSGTQSGENVSWIQWLCPGIHLKSPIIIISFVQIAVYIAS 76

Query: 327 CPAHNAKPGRDGHCVAGFLHRFSFQPLRQNPLLGPSSATLVKMGALVWDKVVHGHQGWRL 506
             A                       L  N +L P+  TLV  GA + + +  G + WRL
Sbjct: 77  LAAG----------------------LAPNEILAPTPQTLVMFGANIPELIRVG-EIWRL 113

Query: 507 FSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVRIGGIY 626
              +++H  + H++ N+   + IGL +E+++G+  +  +Y
Sbjct: 114 ICPLFLHLNLFHILMNLWVQIRIGLTMEEKYGWKMLLAVY 153

>Q6IUY1:RHBL3_TOXGO Rhomboid-like protease 3 - Toxoplasma gondii|
          Length = 263

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 22/58 (37%), Positives = 38/58 (65%)
 Frame = +3

Query: 429 PSSATLVKMGALVWDKVVHGHQGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFG 602
           P+  TL+ +GA  +       Q WR+ + +++HA +LHLV N++ +L I LRLE+++G
Sbjct: 62  PNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYG 118

>P20350:RHOM_DROME Protein rhomboid - Drosophila melanogaster (Fruit fly)|
          Length = 355

 Score = 45.1 bits (105), Expect = 7e-04
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = +3

Query: 492 QGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVRIGGIYL 629
           Q WR FS M++HA   HL  N++  LF G+ LE   G  RIG IY+
Sbjct: 149 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYM 194

>Q19821:ROM1_CAEEL Rhomboid-related protein 1 - Caenorhabditis elegans|
          Length = 356

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
 Frame = +3

Query: 261 WLVPSILVANITVFTIAMYYNNCPAHNAKPGRD--GHCVAGFLHRFSFQPLRQNPLLGPS 434
           W  P I +  IT+  + +++    +     GR     C   F+H     P          
Sbjct: 107 WCPPPIFMLLITIIQVGIFFFYWESDG---GRSIWTDCAGCFVHHNHTAP---------- 153

Query: 435 SATLVKMGALVWDKVVHGHQGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVRI 614
                  G  ++   + G + WR  S M++HAG+ HL+ N++  L +G+ LE      RI
Sbjct: 154 -------GIFIFAPKLRG-EAWRFTSYMFLHAGLNHLLGNVIIQLLVGIPLEVAHKIWRI 205

Query: 615 GGIYLI 632
           G IYL+
Sbjct: 206 GPIYLL 211

>P58872:RHBL3_HUMAN Rhomboid-related protein 3 - Homo sapiens (Human)|
          Length = 404

 Score = 42.0 bits (97), Expect = 0.006
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +3

Query: 492 QGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVRIGGIYL 629
           Q WR  + ++MHAG+ HL  N++  L +G+ LE   G  RIG +Y+
Sbjct: 210 QVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYV 255

>Q9NX52:RHBL2_HUMAN Rhomboid-related protein 2 - Homo sapiens (Human)|
          Length = 303

 Score = 41.6 bits (96), Expect = 0.008
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +3

Query: 492 QGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVRIGGIYL 629
           + WR  S M +HAGV H++ N+   L +G+ LE     +R+G +YL
Sbjct: 119 EAWRFISYMLVHAGVQHILGNLCMQLVLGIPLEMVHKGLRVGLVYL 164

>P54493:YQGP_BACSU TPR repeat-containing protein yqgP - Bacillus subtilis|
          Length = 507

 Score = 40.4 bits (93), Expect = 0.018
 Identities = 23/66 (34%), Positives = 36/66 (54%)
 Frame = +3

Query: 432 SSATLVKMGALVWDKVVHGHQGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVR 611
           ++ TLV  GA     +  G + WRL + + +H G+ HL  N L+L  +G  +E+ +G  R
Sbjct: 202 NTETLVAFGAKENSLIAQG-EWWRLLTPIVLHIGIAHLAFNTLALWSVGTAVERMYGSGR 260

Query: 612 IGGIYL 629
              IYL
Sbjct: 261 FLLIYL 266

>Q695T8:RHBL4_TOXGO Rhomboid-like protease 4 - Toxoplasma gondii|
          Length = 641

 Score = 40.0 bits (92), Expect = 0.023
 Identities = 26/143 (18%), Positives = 60/143 (41%)
 Frame = +3

Query: 429 PSSATLVKMGALVWDKVVHGHQGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYV 608
           P++  L  +G L  + +    + +RLF+ M+MH G LH++ N+   + I   +E  +G++
Sbjct: 320 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 379

Query: 609 RIGGIYLIXXXXXXXXXXXFIRSAVSVXXXXXXXXXXXXXXXELVSNWTIYTNKVAAVTT 788
           R   ++ +               +++V                 V  W     +   +  
Sbjct: 380 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIP-RPGCILV 438

Query: 789 LLFVIAVNLVLGILPHVNNFAHI 857
            + V+ + ++ G+    +N+AH+
Sbjct: 439 FMIVVIIGILTGMAGFTDNYAHM 461

>P58873:RHBL3_MOUSE Rhomboid-related protein 3 - Mus musculus (Mouse)|
          Length = 404

 Score = 39.3 bits (90), Expect = 0.039
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +3

Query: 492 QGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVRIGGIYL 629
           Q WR  + ++MHAGV  L  N+   L +G+ LE   G  RIG +Y+
Sbjct: 210 QAWRYVTYIFMHAGVEQLGLNVALQLLVGVPLEMVHGATRIGLVYV 255

>Q8VC82:RHBL1_MOUSE Rhomboid-related protein 1 - Mus musculus (Mouse)|
          Length = 373

 Score = 39.3 bits (90), Expect = 0.039
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = +3

Query: 483 HGHQGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVRIGGIYL 629
           H  + WR  + M+MH G+  L  N L  L IG+ LE   G +RI  +YL
Sbjct: 176 HRARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYL 224

>O75783:RHBL1_HUMAN Rhomboid-related protein 1 - Homo sapiens (Human)|
          Length = 438

 Score = 39.3 bits (90), Expect = 0.039
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = +3

Query: 483 HGHQGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVRIGGIYL 629
           H  + WR  + M+MH G+  L  N L  L IG+ LE   G +RI  +YL
Sbjct: 241 HRARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYL 289

>Q695U0:RHBL1_TOXGO Rhomboid-like protease 1 - Toxoplasma gondii|
          Length = 293

 Score = 38.9 bits (89), Expect = 0.051
 Identities = 22/70 (31%), Positives = 39/70 (55%)
 Frame = +3

Query: 417 PLLGPSSATLVKMGALVWDKVVHGHQGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQ 596
           PL+ P++  LV  GA     +  G Q WRL   +++HA   H+  N+   L +G  +E++
Sbjct: 85  PLI-PAANILVHFGANYPPLIKQG-QVWRLLLPVFLHANFFHVFFNVFFQLRMGFTIERR 142

Query: 597 FGYVRIGGIY 626
           +G ++  G+Y
Sbjct: 143 YGLLKFTGLY 152

>P46116:AARA_PROST Protein aarA - Providencia stuartii|
          Length = 281

 Score = 37.4 bits (85), Expect = 0.15
 Identities = 21/70 (30%), Positives = 35/70 (50%)
 Frame = +3

Query: 423 LGPSSATLVKMGALVWDKVVHGHQGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFG 602
           L    + L+  GA ++   + G   WR    M +H+   HL  N L+L  IG+  E+ +G
Sbjct: 45  LDSRESNLILFGANIYQLSLTG-DWWRYPISMMLHSNGTHLAFNCLALFVIGIGCERAYG 103

Query: 603 YVRIGGIYLI 632
             ++  IY+I
Sbjct: 104 KFKLLAIYII 113

>Q51508:PCHA_PSEAE Salicylate biosynthesis isochorismate synthase - Pseudomonas|
           aeruginosa
          Length = 476

 Score = 34.3 bits (77), Expect = 1.3
 Identities = 24/77 (31%), Positives = 32/77 (41%)
 Frame = +3

Query: 228 PQHEGEREWTPWLVPSILVANITVFTIAMYYNNCPAHNAKPGRDGHCVAGFLHRFSFQPL 407
           P+   E  W  +   S+++A ITV      Y     H AKPG D   +A + H  +   L
Sbjct: 118 PRGPREEHWQAFADASLMLAGITVLREGERYRVLCQHLAKPGEDALALAAY-HCSALLRL 176

Query: 408 RQNPLLGPSSATLVKMG 458
           RQ     PS  T    G
Sbjct: 177 RQPARRRPSGPTAGAQG 193

>Q8LB17:Y3846_ARATH Uncharacterized protein At3g58460 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 403

 Score = 33.9 bits (76), Expect = 1.6
 Identities = 14/46 (30%), Positives = 29/46 (63%)
 Frame = +3

Query: 477 VVHGHQGWRLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFGYVRI 614
           ++   Q +R ++ +  H  +LH++ NM++L+ +G  LE+  G VR+
Sbjct: 58  IISRFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRL 103

>Q8RXW0:Y3761_ARATH Uncharacterized protein At3g17611 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 334

 Score = 33.5 bits (75), Expect = 2.1
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +3

Query: 501 RLFSCMWMHAGVLHLVANMLSLLFIGLRLEQQFG 602
           RLF   + H    HLV NM+SLL+ G++LE   G
Sbjct: 78  RLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMG 111

>Q58DA6:S35A2_BOVIN UDP-galactose translocator - Bos taurus (Bovine)|
          Length = 393

 Score = 32.3 bits (72), Expect = 4.8
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = +3

Query: 87  GSSSVVRSTATAQVVQPAAMATSRADVEKGGSSPRKQDKGKVPAPLYPQHEGEREWTPWL 266
           G+  V+ +     + + AA A + A     G    +Q  G+ P P    H G+    P+L
Sbjct: 327 GAGLVIGAVYLYSLPRGAAKAIASASAPTSGPCTHQQPPGQPPPPQLSSHHGDLSTEPFL 386

Query: 267 VPSILV 284
             S+LV
Sbjct: 387 PKSVLV 392

>P34356:ROM2_CAEEL Rhomboid-related protein 2 - Caenorhabditis elegans|
          Length = 435

 Score = 32.0 bits (71), Expect = 6.2
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 498 WRLFSCMWMHAGVLHLVANMLSLLFIGLRLE 590
           WRLF+   ++ G+ H++ N+L  L IG+ LE
Sbjct: 170 WRLFTYCLINVGIFHIIFNILIQLAIGVPLE 200

>Q8HYJ5:FUT3_PONPY Galactoside 3(4)-L-fucosyltransferase - Pongo pygmaeus (Orangutan)|
          Length = 372

 Score = 32.0 bits (71), Expect = 6.2
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = -2

Query: 676 LRMKSDDSTLPPTPEMR*MPPIRTYPNCCSRRRPMKRRLSMLATRWRTPACIHMQEKRRH 497
           LR+  DD+T  P P +  + P+   P   SR+     R ++L   W  P  I +   R  
Sbjct: 34  LRVSRDDATGSPRPGLMAVEPVTGAPGGSSRQDTTPTRHTLLILLWTWPFHIPVALSRCS 93

Query: 496 PWCPCTTLSHTSA 458
              P T   H +A
Sbjct: 94  EMAPGTADCHITA 106


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 164,021,519
Number of extensions: 3097519
Number of successful extensions: 8944
Number of sequences better than 10.0: 19
Number of HSP's gapped: 8929
Number of HSP's successfully gapped: 19
Length of query: 458
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 341
Effective length of database: 68,593,924
Effective search space: 23390528084
Effective search space used: 23390528084
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)