| Clone Name | FLbaf3a13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058428.1| Oryza sativa (japonica cultivar-group) Os03g0848400 (Os03g0848400) mRNA, complete cds Length = 1634 Score = 521 bits (263), Expect = e-144 Identities = 551/647 (85%) Strand = Plus / Plus Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686 |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| | Sbjct: 562 gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 621 Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746 || |||||||||||| |||| ||||||||||||||||||| ||||| || |||||||| Sbjct: 622 ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 681 Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806 || || || |||||||| |||||||||||||| || ||||||||||||||| ||||| Sbjct: 682 ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 741 Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866 |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| | Sbjct: 742 catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 801 Query: 867 gctctggcggacgcacctcctcgaggcctcactcatcggatacacactattcctcgcgtt 926 ||| |||||||| ||||||||||||||||| |||||||||| || |||||||| || || Sbjct: 802 gctatggcggactcacctcctcgaggcctccctcatcggatttactctattccttgcatt 861 Query: 927 tgtcattgaccggttgcaccactaccttcagaagctcatcaccctcaggaaatcagccaa 986 ||||||||||||||||||||||||||| | || || || || || |||||| ||||||| Sbjct: 862 tgtcattgaccggttgcaccactacctccgaaaactgattacactgaggaaagcagccaa 921 Query: 987 catctccagggaggaggtcgagaagctacaaatggagaaccggtctttgcgcgagaagga 1046 || || || |||||||||||||| || |||||||||||||||| || || || ||||| Sbjct: 922 cacatcaagagaggaggtcgagaaacttcaaatggagaaccggttattccgtgaaaagga 981 Query: 1047 ggagaagtcggccagtgagatgaagaagcttcagcaggacatggcaaaactgagcgagga 1106 |||||| || ||||||| || |||||||| || ||||| || || || || | |||| Sbjct: 982 ggagaaatcttccagtgaaatcaagaagctccaccaggagattgctaagctaaacgagag 1041 Query: 1107 catgaagaagctgaaatctgagtccgaagatcaccagaggaaagcgtctgacgcggaggc 1166 ||||||||||||||||| ||||| ||||||||| ||||||| | || || |||||||| Sbjct: 1042 tatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtgttggaagcggaggc 1101 Query: 1167 ccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgagtacgaccggctgct 1226 |||||| |||||||| |||||||||||||||||||| ||||| ||||||||| || |||| Sbjct: 1102 ccatgtgaacgccctacagaagcagtcggaggagcttctcctggagtacgacaggttgct 1161 Query: 1227 ggaggacaaccagatcctgcagtcccagctccactacaaaggctgaa 1273 ||| ||||||||||| || || || ||||| |||||||||||||||| Sbjct: 1162 ggaagacaaccagattctacaatctcagcttcactacaaaggctgaa 1208
>dbj|AK067600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111M09, full insert sequence Length = 1635 Score = 521 bits (263), Expect = e-144 Identities = 551/647 (85%) Strand = Plus / Plus Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686 |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| | Sbjct: 563 gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 622 Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746 || |||||||||||| |||| ||||||||||||||||||| ||||| || |||||||| Sbjct: 623 ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 682 Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806 || || || |||||||| |||||||||||||| || ||||||||||||||| ||||| Sbjct: 683 ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 742 Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866 |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| | Sbjct: 743 catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 802 Query: 867 gctctggcggacgcacctcctcgaggcctcactcatcggatacacactattcctcgcgtt 926 ||| |||||||| ||||||||||||||||| |||||||||| || |||||||| || || Sbjct: 803 gctatggcggactcacctcctcgaggcctccctcatcggatttactctattccttgcatt 862 Query: 927 tgtcattgaccggttgcaccactaccttcagaagctcatcaccctcaggaaatcagccaa 986 ||||||||||||||||||||||||||| | || || || || || |||||| ||||||| Sbjct: 863 tgtcattgaccggttgcaccactacctccgaaaactgattacactgaggaaagcagccaa 922 Query: 987 catctccagggaggaggtcgagaagctacaaatggagaaccggtctttgcgcgagaagga 1046 || || || |||||||||||||| || |||||||||||||||| || || || ||||| Sbjct: 923 cacatcaagagaggaggtcgagaaacttcaaatggagaaccggttattccgtgaaaagga 982 Query: 1047 ggagaagtcggccagtgagatgaagaagcttcagcaggacatggcaaaactgagcgagga 1106 |||||| || ||||||| || |||||||| || ||||| || || || || | |||| Sbjct: 983 ggagaaatcttccagtgaaatcaagaagctccaccaggagattgctaagctaaacgagag 1042 Query: 1107 catgaagaagctgaaatctgagtccgaagatcaccagaggaaagcgtctgacgcggaggc 1166 ||||||||||||||||| ||||| ||||||||| ||||||| | || || |||||||| Sbjct: 1043 tatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtgttggaagcggaggc 1102 Query: 1167 ccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgagtacgaccggctgct 1226 |||||| |||||||| |||||||||||||||||||| ||||| ||||||||| || |||| Sbjct: 1103 ccatgtgaacgccctacagaagcagtcggaggagcttctcctggagtacgacaggttgct 1162 Query: 1227 ggaggacaaccagatcctgcagtcccagctccactacaaaggctgaa 1273 ||| ||||||||||| || || || ||||| |||||||||||||||| Sbjct: 1163 ggaagacaaccagattctacaatctcagcttcactacaaaggctgaa 1209
>dbj|AK060400.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-B10, full insert sequence Length = 1412 Score = 521 bits (263), Expect = e-144 Identities = 551/647 (85%) Strand = Plus / Plus Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686 |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| | Sbjct: 407 gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 466 Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746 || |||||||||||| |||| ||||||||||||||||||| ||||| || |||||||| Sbjct: 467 ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 526 Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806 || || || |||||||| |||||||||||||| || ||||||||||||||| ||||| Sbjct: 527 ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 586 Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866 |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| | Sbjct: 587 catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 646 Query: 867 gctctggcggacgcacctcctcgaggcctcactcatcggatacacactattcctcgcgtt 926 ||| |||||||| ||||||||||||||||| |||||||||| || |||||||| || || Sbjct: 647 gctatggcggactcacctcctcgaggcctccctcatcggatttactctattccttgcatt 706 Query: 927 tgtcattgaccggttgcaccactaccttcagaagctcatcaccctcaggaaatcagccaa 986 ||||||||||||||||||||||||||| | || || || || || |||||| ||||||| Sbjct: 707 tgtcattgaccggttgcaccactacctccgaaaactgattacactgaggaaagcagccaa 766 Query: 987 catctccagggaggaggtcgagaagctacaaatggagaaccggtctttgcgcgagaagga 1046 || || || |||||||||||||| || |||||||||||||||| || || || ||||| Sbjct: 767 cacatcaagagaggaggtcgagaaacttcaaatggagaaccggttattccgtgaaaagga 826 Query: 1047 ggagaagtcggccagtgagatgaagaagcttcagcaggacatggcaaaactgagcgagga 1106 |||||| || ||||||| || |||||||| || ||||| || || || || | |||| Sbjct: 827 ggagaaatcttccagtgaaatcaagaagctccaccaggagattgctaagctaaacgagag 886 Query: 1107 catgaagaagctgaaatctgagtccgaagatcaccagaggaaagcgtctgacgcggaggc 1166 ||||||||||||||||| ||||| ||||||||| ||||||| | || || |||||||| Sbjct: 887 tatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtgttggaagcggaggc 946 Query: 1167 ccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgagtacgaccggctgct 1226 |||||| |||||||| |||||||||||||||||||| ||||| ||||||||| || |||| Sbjct: 947 ccatgtgaacgccctacagaagcagtcggaggagcttctcctggagtacgacaggttgct 1006 Query: 1227 ggaggacaaccagatcctgcagtcccagctccactacaaaggctgaa 1273 ||| ||||||||||| || || || ||||| |||||||||||||||| Sbjct: 1007 ggaagacaaccagattctacaatctcagcttcactacaaaggctgaa 1053
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 276 bits (139), Expect = 2e-70 Identities = 244/279 (87%) Strand = Plus / Minus Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686 |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| | Sbjct: 35462374 gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 35462315 Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746 || |||||||||||| |||| ||||||||||||||||||| ||||| || |||||||| Sbjct: 35462314 ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 35462255 Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806 || || || |||||||| |||||||||||||| || ||||||||||||||| ||||| Sbjct: 35462254 ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 35462195 Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866 |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| | Sbjct: 35462194 catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 35462135 Query: 867 gctctggcggacgcacctcctcgaggcctcactcatcgg 905 ||| |||||||| ||||||||||||||||| |||||||| Sbjct: 35462134 gctatggcggactcacctcctcgaggcctccctcatcgg 35462096 Score = 256 bits (129), Expect = 2e-64 Identities = 303/361 (83%) Strand = Plus / Minus Query: 913 ctattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatcaccctc 972 |||||||| || ||||||||||||||||||||||||||||| | || || || || || Sbjct: 35460640 ctattccttgcatttgtcattgaccggttgcaccactacctccgaaaactgattacactg 35460581 Query: 973 aggaaatcagccaacatctccagggaggaggtcgagaagctacaaatggagaaccggtct 1032 |||||| ||||||||| || || |||||||||||||| || |||||||||||||||| Sbjct: 35460580 aggaaagcagccaacacatcaagagaggaggtcgagaaacttcaaatggagaaccggtta 35460521 Query: 1033 ttgcgcgagaaggaggagaagtcggccagtgagatgaagaagcttcagcaggacatggca 1092 || || || ||||||||||| || ||||||| || |||||||| || ||||| || || Sbjct: 35460520 ttccgtgaaaaggaggagaaatcttccagtgaaatcaagaagctccaccaggagattgct 35460461 Query: 1093 aaactgagcgaggacatgaagaagctgaaatctgagtccgaagatcaccagaggaaagcg 1152 || || | |||| ||||||||||||||||| ||||| ||||||||| ||||||| | | Sbjct: 35460460 aagctaaacgagagtatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtg 35460401 Query: 1153 tctgacgcggaggcccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgag 1212 | || |||||||||||||| |||||||| |||||||||||||||||||| ||||| ||| Sbjct: 35460400 ttggaagcggaggcccatgtgaacgccctacagaagcagtcggaggagcttctcctggag 35460341 Query: 1213 tacgaccggctgctggaggacaaccagatcctgcagtcccagctccactacaaaggctga 1272 |||||| || ||||||| ||||||||||| || || || ||||| ||||||||||||||| Sbjct: 35460340 tacgacaggttgctggaagacaaccagattctacaatctcagcttcactacaaaggctga 35460281 Query: 1273 a 1273 | Sbjct: 35460280 a 35460280
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 276 bits (139), Expect = 2e-70 Identities = 244/279 (87%) Strand = Plus / Plus Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686 |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| | Sbjct: 115324 gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 115383 Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746 || |||||||||||| |||| ||||||||||||||||||| ||||| || |||||||| Sbjct: 115384 ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 115443 Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806 || || || |||||||| |||||||||||||| || ||||||||||||||| ||||| Sbjct: 115444 ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 115503 Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866 |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| | Sbjct: 115504 catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 115563 Query: 867 gctctggcggacgcacctcctcgaggcctcactcatcgg 905 ||| |||||||| ||||||||||||||||| |||||||| Sbjct: 115564 gctatggcggactcacctcctcgaggcctccctcatcgg 115602 Score = 256 bits (129), Expect = 2e-64 Identities = 303/361 (83%) Strand = Plus / Plus Query: 913 ctattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatcaccctc 972 |||||||| || ||||||||||||||||||||||||||||| | || || || || || Sbjct: 117058 ctattccttgcatttgtcattgaccggttgcaccactacctccgaaaactgattacactg 117117 Query: 973 aggaaatcagccaacatctccagggaggaggtcgagaagctacaaatggagaaccggtct 1032 |||||| ||||||||| || || |||||||||||||| || |||||||||||||||| Sbjct: 117118 aggaaagcagccaacacatcaagagaggaggtcgagaaacttcaaatggagaaccggtta 117177 Query: 1033 ttgcgcgagaaggaggagaagtcggccagtgagatgaagaagcttcagcaggacatggca 1092 || || || ||||||||||| || ||||||| || |||||||| || ||||| || || Sbjct: 117178 ttccgtgaaaaggaggagaaatcttccagtgaaatcaagaagctccaccaggagattgct 117237 Query: 1093 aaactgagcgaggacatgaagaagctgaaatctgagtccgaagatcaccagaggaaagcg 1152 || || | |||| ||||||||||||||||| ||||| ||||||||| ||||||| | | Sbjct: 117238 aagctaaacgagagtatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtg 117297 Query: 1153 tctgacgcggaggcccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgag 1212 | || |||||||||||||| |||||||| |||||||||||||||||||| ||||| ||| Sbjct: 117298 ttggaagcggaggcccatgtgaacgccctacagaagcagtcggaggagcttctcctggag 117357 Query: 1213 tacgaccggctgctggaggacaaccagatcctgcagtcccagctccactacaaaggctga 1272 |||||| || ||||||| ||||||||||| || || || ||||| ||||||||||||||| Sbjct: 117358 tacgacaggttgctggaagacaaccagattctacaatctcagcttcactacaaaggctga 117417 Query: 1273 a 1273 | Sbjct: 117418 a 117418
>ref|NM_001065931.1| Oryza sativa (japonica cultivar-group) Os07g0291200 (Os07g0291200) mRNA, partial cds Length = 4007 Score = 254 bits (128), Expect = 8e-64 Identities = 239/276 (86%) Strand = Plus / Plus Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686 |||||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||| Sbjct: 508 gctgctgttcctggtgctgttcgcggagggcgcggcggcgctgctgctgatggtgaagat 567 Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746 ||| ||||||||||||||||| ||||||||||||||||||| |||| ||| || ||||| Sbjct: 568 cgggccgctgcgggagctggcgatgcgcggcgtggagcaggccaaggacggtaaaggccc 627 Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806 ||| | || |||||||| || |||||||| ||||||| ||||||||||| ||||| Sbjct: 628 cgcggcggtgaagacgctggcgtgcacgctgctcgtcatcttcatgtccagcgtcgccag 687 Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866 |||| || ||||||||||| | || |||| |||||| ||||||||||||||||||| | Sbjct: 688 catcctccggatccagaaccgcggcatcaagctcggcaccgtcagccccatggaccaggt 747 Query: 867 gctctggcggacgcacctcctcgaggcctcactcat 902 ||| ||||||||||||||||||||||| || ||||| Sbjct: 748 gctatggcggacgcacctcctcgaggcttccctcat 783 Score = 58.0 bits (29), Expect = 1e-04 Identities = 92/113 (81%) Strand = Plus / Plus Query: 907 tacacactattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatc 966 |||| ||||||||| || ||||||||||| ||||| |||||||||| | |||||| | Sbjct: 3558 tacatactattccttgcatttgtcattgatcggttacaccactaccaccggaagctgact 3617 Query: 967 accctcaggaaatcagccaacatctccagggaggaggtcgagaagctacaaat 1019 | || | |||| | || |||| ||||||||||||||| ||||| |||||||| Sbjct: 3618 atactgaagaaaaccgcaaacacctccagggaggaggttgagaaactacaaat 3670
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 254 bits (128), Expect = 8e-64 Identities = 239/276 (86%) Strand = Plus / Minus Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686 |||||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||| Sbjct: 11323696 gctgctgttcctggtgctgttcgcggagggcgcggcggcgctgctgctgatggtgaagat 11323637 Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746 ||| ||||||||||||||||| ||||||||||||||||||| |||| ||| || ||||| Sbjct: 11323636 cgggccgctgcgggagctggcgatgcgcggcgtggagcaggccaaggacggtaaaggccc 11323577 Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806 ||| | || |||||||| || |||||||| ||||||| ||||||||||| ||||| Sbjct: 11323576 cgcggcggtgaagacgctggcgtgcacgctgctcgtcatcttcatgtccagcgtcgccag 11323517 Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866 |||| || ||||||||||| | || |||| |||||| ||||||||||||||||||| | Sbjct: 11323516 catcctccggatccagaaccgcggcatcaagctcggcaccgtcagccccatggaccaggt 11323457 Query: 867 gctctggcggacgcacctcctcgaggcctcactcat 902 ||| ||||||||||||||||||||||| || ||||| Sbjct: 11323456 gctatggcggacgcacctcctcgaggcttccctcat 11323421 Score = 58.0 bits (29), Expect = 1e-04 Identities = 92/113 (81%) Strand = Plus / Minus Query: 907 tacacactattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatc 966 |||| ||||||||| || ||||||||||| ||||| |||||||||| | |||||| | Sbjct: 11320646 tacatactattccttgcatttgtcattgatcggttacaccactaccaccggaagctgact 11320587 Query: 967 accctcaggaaatcagccaacatctccagggaggaggtcgagaagctacaaat 1019 | || | |||| | || |||| ||||||||||||||| ||||| |||||||| Sbjct: 11320586 atactgaagaaaaccgcaaacacctccagggaggaggttgagaaactacaaat 11320534
>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0656C04 Length = 143411 Score = 254 bits (128), Expect = 8e-64 Identities = 239/276 (86%) Strand = Plus / Minus Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686 |||||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||| Sbjct: 24207 gctgctgttcctggtgctgttcgcggagggcgcggcggcgctgctgctgatggtgaagat 24148 Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746 ||| ||||||||||||||||| ||||||||||||||||||| |||| ||| || ||||| Sbjct: 24147 cgggccgctgcgggagctggcgatgcgcggcgtggagcaggccaaggacggtaaaggccc 24088 Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806 ||| | || |||||||| || |||||||| ||||||| ||||||||||| ||||| Sbjct: 24087 cgcggcggtgaagacgctggcgtgcacgctgctcgtcatcttcatgtccagcgtcgccag 24028 Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866 |||| || ||||||||||| | || |||| |||||| ||||||||||||||||||| | Sbjct: 24027 catcctccggatccagaaccgcggcatcaagctcggcaccgtcagccccatggaccaggt 23968 Query: 867 gctctggcggacgcacctcctcgaggcctcactcat 902 ||| ||||||||||||||||||||||| || ||||| Sbjct: 23967 gctatggcggacgcacctcctcgaggcttccctcat 23932 Score = 58.0 bits (29), Expect = 1e-04 Identities = 92/113 (81%) Strand = Plus / Minus Query: 907 tacacactattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatc 966 |||| ||||||||| || ||||||||||| ||||| |||||||||| | |||||| | Sbjct: 21157 tacatactattccttgcatttgtcattgatcggttacaccactaccaccggaagctgact 21098 Query: 967 accctcaggaaatcagccaacatctccagggaggaggtcgagaagctacaaat 1019 | || | |||| | || |||| ||||||||||||||| ||||| |||||||| Sbjct: 21097 atactgaagaaaaccgcaaacacctccagggaggaggttgagaaactacaaat 21045
>dbj|AK064969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B09, full insert sequence Length = 4008 Score = 254 bits (128), Expect = 8e-64 Identities = 239/276 (86%) Strand = Plus / Plus Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686 |||||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||| Sbjct: 509 gctgctgttcctggtgctgttcgcggagggcgcggcggcgctgctgctgatggtgaagat 568 Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746 ||| ||||||||||||||||| ||||||||||||||||||| |||| ||| || ||||| Sbjct: 569 cgggccgctgcgggagctggcgatgcgcggcgtggagcaggccaaggacggtaaaggccc 628 Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806 ||| | || |||||||| || |||||||| ||||||| ||||||||||| ||||| Sbjct: 629 cgcggcggtgaagacgctggcgtgcacgctgctcgtcatcttcatgtccagcgtcgccag 688 Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866 |||| || ||||||||||| | || |||| |||||| ||||||||||||||||||| | Sbjct: 689 catcctccggatccagaaccgcggcatcaagctcggcaccgtcagccccatggaccaggt 748 Query: 867 gctctggcggacgcacctcctcgaggcctcactcat 902 ||| ||||||||||||||||||||||| || ||||| Sbjct: 749 gctatggcggacgcacctcctcgaggcttccctcat 784 Score = 58.0 bits (29), Expect = 1e-04 Identities = 92/113 (81%) Strand = Plus / Plus Query: 907 tacacactattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatc 966 |||| ||||||||| || ||||||||||| ||||| |||||||||| | |||||| | Sbjct: 3559 tacatactattccttgcatttgtcattgatcggttacaccactaccaccggaagctgact 3618 Query: 967 accctcaggaaatcagccaacatctccagggaggaggtcgagaagctacaaat 1019 | || | |||| | || |||| ||||||||||||||| ||||| |||||||| Sbjct: 3619 atactgaagaaaaccgcaaacacctccagggaggaggttgagaaactacaaat 3671
>gb|AY110457.1| Zea mays CL22317_1 mRNA sequence Length = 839 Score = 117 bits (59), Expect = 1e-22 Identities = 152/183 (83%) Strand = Plus / Plus Query: 884 tcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccggttgc 943 |||||||||| || |||||||||||||| |||||||| || ||||| || |||||| ||| Sbjct: 84 tcctcgaggcatccctcatcggatacacgctattccttgcatttgtaatcgaccggctgc 143 Query: 944 accactaccttcagaagctcatcaccctcaggaaatcagccaacatctccagggaggagg 1003 |||||||||| | ||||| || ||||| |||||| || ||| || ||||| ||||||| Sbjct: 144 accactacctgcgaaagctgatgaccctgaggaaaacatccagcacatccagagaggagg 203 Query: 1004 tcgagaagctacaaatggagaaccggtctttgcgcgagaaggaggagaagtcggccagtg 1063 | ||||| || || |||||||||||||| | ||||| ||||||||||| || |||||| Sbjct: 204 tggagaaacttcagatggagaaccggtcgctccgcgaaaaggaggagaaatcctccagtg 263 Query: 1064 aga 1066 ||| Sbjct: 264 aga 266 Score = 111 bits (56), Expect = 8e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 1118 tgaaatctgagtccgaagatcaccagaggaaagcgtctgacgcggaggcccatgtcaacg 1177 ||||||||||| ||||||| ||| ||||||| ||||| | || |||||||||||| ||| Sbjct: 318 tgaaatctgagaccgaagagcacgagaggaaggcgtcggtggcagaggcccatgtcgacg 377 Query: 1178 ccctgcagaagcagtcggaggagctgctcctcgagtacga 1217 | ||||||||||||||||||||||||||||| |||||||| Sbjct: 378 cgctgcagaagcagtcggaggagctgctcctggagtacga 417
>gb|DQ245965.1| Zea mays clone 93628 mRNA sequence Length = 845 Score = 61.9 bits (31), Expect = 6e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 880 cacctcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccgg 939 |||||||||||||| |||||||| |||||| | ||||||| || || |||||||||||| Sbjct: 357 cacctcctcgaggcgtcactcatgggatactccttattccttgctttagtcattgaccgg 416 Query: 940 ttgcaccacta 950 ||||| |||| Sbjct: 417 ctgcacaacta 427
>gb|AY105569.1| Zea mays PCO107462 mRNA sequence Length = 1024 Score = 61.9 bits (31), Expect = 6e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 880 cacctcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccgg 939 |||||||||||||| |||||||| |||||| | ||||||| || || |||||||||||| Sbjct: 466 cacctcctcgaggcgtcactcatgggatactccttattccttgctttagtcattgaccgg 525 Query: 940 ttgcaccacta 950 ||||| |||| Sbjct: 526 ctgcacaacta 536
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 748 gccaccgtcaagacgctcgcctgcacgctct 778 |||||||||||||||| |||||||||||||| Sbjct: 369356 gccaccgtcaagacgcacgcctgcacgctct 369386
>emb|CT830671.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130P23, full insert sequence Length = 1171 Score = 48.1 bits (24), Expect = 0.094 Identities = 42/48 (87%) Strand = Plus / Plus Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666 ||||||| |||||||||||||||||| | ||||||| ||| |||||| Sbjct: 207 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 254
>ref|NM_001064147.1| Oryza sativa (japonica cultivar-group) Os06g0367500 (Os06g0367500) mRNA, partial cds Length = 1070 Score = 48.1 bits (24), Expect = 0.094 Identities = 51/60 (85%) Strand = Plus / Plus Query: 880 cacctcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccgg 939 ||||||||||||||||| ||||| |||||| | ||||||| || | |||||||||||| Sbjct: 259 cacctcctcgaggcctcgctcatgggatactccttattccttgctctggtcattgaccgg 318
>ref|NM_001053224.1| Oryza sativa (japonica cultivar-group) Os02g0321800 (Os02g0321800) mRNA, complete cds Length = 1187 Score = 48.1 bits (24), Expect = 0.094 Identities = 42/48 (87%) Strand = Plus / Plus Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666 ||||||| |||||||||||||||||| | ||||||| ||| |||||| Sbjct: 192 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 239
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.094 Identities = 42/48 (87%) Strand = Plus / Plus Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666 ||||||| |||||||||||||||||| | ||||||| ||| |||||| Sbjct: 12859101 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 12859148 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 ggagggaaaggtggtggcggg 375 ||||||||||||||||||||| Sbjct: 27671427 ggagggaaaggtggtggcggg 27671407
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 48.1 bits (24), Expect = 0.094 Identities = 42/48 (87%) Strand = Plus / Plus Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666 ||||||| |||||||||||||||||| | ||||||| ||| |||||| Sbjct: 78583 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 78630
>dbj|AK070852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065A17, full insert sequence Length = 1188 Score = 48.1 bits (24), Expect = 0.094 Identities = 42/48 (87%) Strand = Plus / Plus Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666 ||||||| |||||||||||||||||| | ||||||| ||| |||||| Sbjct: 193 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 240
>dbj|AK067188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K24, full insert sequence Length = 1112 Score = 48.1 bits (24), Expect = 0.094 Identities = 42/48 (87%) Strand = Plus / Plus Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666 ||||||| |||||||||||||||||| | ||||||| ||| |||||| Sbjct: 93 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 140
>dbj|AK063619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-E03, full insert sequence Length = 1070 Score = 48.1 bits (24), Expect = 0.094 Identities = 51/60 (85%) Strand = Plus / Plus Query: 880 cacctcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccgg 939 ||||||||||||||||| ||||| |||||| | ||||||| || | |||||||||||| Sbjct: 259 cacctcctcgaggcctcgctcatgggatactccttattccttgctctggtcattgaccgg 318
>gb|AC092291.3| Homo sapiens chromosome 16 clone CTD-2502C11, complete sequence Length = 194551 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 355 ggagggaaaggtggtggcgggtt 377 ||||||||||||||||||||||| Sbjct: 66018 ggagggaaaggtggtggcgggtt 66040
>gb|AC107075.4| Homo sapiens BAC clone RP11-452N17 from 2, complete sequence Length = 176425 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1392 tgtgtgttctgtagttttgtttt 1414 ||||||||||||||||||||||| Sbjct: 134753 tgtgtgttctgtagttttgtttt 134775
>emb|AM402966.1| Pseudomonas stutzeri narX gene (partial), narK operon and narG gene (partial), strain ATCC14405 Length = 4585 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 629 tgctgttcctggtgctgttcgc 650 |||||||||||||||||||||| Sbjct: 1650 tgctgttcctggtgctgttcgc 1671
>ref|XM_586169.2| PREDICTED: Bos taurus similar to lung cancer metastasis-related protein 1 homolog, transcript variant 1 (LOC509245), mRNA Length = 1530 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 ctttcttcttcctcttccgctc 240 |||||||||||||||||||||| Sbjct: 663 ctttcttcttcctcttccgctc 642
>ref|XM_864023.1| PREDICTED: Bos taurus similar to lung cancer metastasis-related protein 1 homolog, transcript variant 2 (LOC509245), mRNA Length = 705 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 ctttcttcttcctcttccgctc 240 |||||||||||||||||||||| Sbjct: 662 ctttcttcttcctcttccgctc 641
>ref|XM_871875.1| PREDICTED: Bos taurus similar to lung cancer metastasis-related protein 1 homolog, transcript variant 3 (LOC509245), mRNA Length = 1957 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 ctttcttcttcctcttccgctc 240 |||||||||||||||||||||| Sbjct: 1090 ctttcttcttcctcttccgctc 1069
>gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosome 12, complete sequence Length = 157411 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 205 tcagagacgaggtgctttcttc 226 |||||||||||||||||||||| Sbjct: 154832 tcagagacgaggtgctttcttc 154811
>gb|AY051399.1| Haemophilus influenzae strain 48P29H1 outer membrane protein P2 (ompP2) gene, partial cds Length = 1050 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 627 gctgctgttcctggtgctgttc 648 |||||||||||||||||||||| Sbjct: 490 gctgctgttcctggtgctgttc 511
>gb|AC013652.8| Homo sapiens chromosome 15, clone RP11-462P6, complete sequence Length = 189761 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1420 actgaaaaagtcagggatggtgagat 1445 ||||||||||||||||| |||||||| Sbjct: 50023 actgaaaaagtcagggagggtgagat 50048
>gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete cds; NarL-like (narL) and NarX-like (narX) genes, complete sequence; NarK (narK), NarM (narM), NarG (narG), NarH (narH), NarJ (narJ), and NarI (narI) genes, complete cds; and unknown gene Length = 15150 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 629 tgctgttcctggtgctgttcgc 650 |||||||||||||||||||||| Sbjct: 5917 tgctgttcctggtgctgttcgc 5938
>dbj|AB110611.1| Pseudomonas sp. MT-1 nar gene cluster (orf1, orf2, orf3, narL, narX, narK, orf4, narM, narG, narH, narJ, narI, nifM), partial and complete cds Length = 15819 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 629 tgctgttcctggtgctgttcgc 650 |||||||||||||||||||||| Sbjct: 6132 tgctgttcctggtgctgttcgc 6153
>ref|XM_310875.2| Anopheles gambiae str. PEST ENSANGP00000012545 (ENSANGG00000010056), partial mRNA Length = 759 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1210 gagtacgaccggctgctggaggacaaccag 1239 |||||||||||||||||| |||| |||||| Sbjct: 223 gagtacgaccggctgctgcaggagaaccag 252
>gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, complete sequence Length = 167125 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 tcagagacgaggtgctttcttc 226 |||||||||||||||||||||| Sbjct: 122871 tcagagacgaggtgctttcttc 122892
>emb|CT030159.11| Mouse DNA sequence from clone RP24-145F3 on chromosome 13, complete sequence Length = 203647 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1423 gaaaaagtcagggatggtgagatgg 1447 ||||||||||||| ||||||||||| Sbjct: 85671 gaaaaagtcagggctggtgagatgg 85647
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 cggcgccatgatcccgctgct 632 ||||||||||||||||||||| Sbjct: 17526790 cggcgccatgatcccgctgct 17526810
>ref|XM_974224.1| PREDICTED: Mus musculus RIKEN cDNA 1110018J18 gene, transcript variant 6 (1110018J18Rik), mRNA Length = 2862 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1423 gaaaaagtcagggatggtgagatgg 1447 ||||||||||||| ||||||||||| Sbjct: 1169 gaaaaagtcagggctggtgagatgg 1193
>ref|XM_974265.1| PREDICTED: Mus musculus RIKEN cDNA 1110018J18 gene, transcript variant 2 (1110018J18Rik), mRNA Length = 2994 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1423 gaaaaagtcagggatggtgagatgg 1447 ||||||||||||| ||||||||||| Sbjct: 1301 gaaaaagtcagggctggtgagatgg 1325
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 793 tccagcatcgccgccatcgtc 813 ||||||||||||||||||||| Sbjct: 574403 tccagcatcgccgccatcgtc 574383
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 367 ggtggcgggttcctgtccctccgcc 391 ||||||||| ||||||||||||||| Sbjct: 648213 ggtggcgggatcctgtccctccgcc 648237 Score = 42.1 bits (21), Expect = 5.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 628 ctgctgttcctggtgctgttcgcggaggg 656 |||||||||||| ||||||||||||||| Sbjct: 1868011 ctgctgttcctgacgctgttcgcggaggg 1867983
>gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosome 14, complete sequence Length = 164905 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 ggacagccaggggagggaaag 364 ||||||||||||||||||||| Sbjct: 5218 ggacagccaggggagggaaag 5238
>gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, complete sequence Length = 225600 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1391 gtgtgtgttctgtagttttgttttg 1415 |||||||| |||||||||||||||| Sbjct: 194943 gtgtgtgtcctgtagttttgttttg 194967
>ref|NM_133000.2| Drosophila melanogaster CG5703-RA (CG5703), mRNA Length = 1061 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 cggcgccatgatcccgctgct 632 ||||||||||||||||||||| Sbjct: 466 cggcgccatgatcccgctgct 486
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1345 tggctttcattcccctctctaactt 1369 |||||||||||||||||||| |||| Sbjct: 1684859 tggctttcattcccctctctcactt 1684835
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1185 gaagcagtcggaggagctgct 1205 ||||||||||||||||||||| Sbjct: 1034186 gaagcagtcggaggagctgct 1034206 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1185 gaagcagtcggaggagctgct 1205 ||||||||||||||||||||| Sbjct: 1067429 gaagcagtcggaggagctgct 1067449
>dbj|AK145073.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830036L19 product:weakly similar to FmHP [Fugu rubripes], full insert sequence Length = 2555 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1423 gaaaaagtcagggatggtgagatgg 1447 ||||||||||||| ||||||||||| Sbjct: 1321 gaaaaagtcagggctggtgagatgg 1345
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 gtggcgctgctgctcatggtc 681 ||||||||||||||||||||| Sbjct: 3951527 gtggcgctgctgctcatggtc 3951507
>dbj|AK145867.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530009M18 product:hypothetical protein, full insert sequence Length = 2858 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1423 gaaaaagtcagggatggtgagatgg 1447 ||||||||||||| ||||||||||| Sbjct: 1192 gaaaaagtcagggctggtgagatgg 1216
>dbj|AK148379.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370118M19 product:weakly similar to FmHP [Fugu rubripes], full insert sequence Length = 1649 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1423 gaaaaagtcagggatggtgagatgg 1447 ||||||||||||| ||||||||||| Sbjct: 1302 gaaaaagtcagggctggtgagatgg 1326
>dbj|AK168701.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920046F09 product:weakly similar to FmHP [Fugu rubripes], full insert sequence Length = 2894 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1423 gaaaaagtcagggatggtgagatgg 1447 ||||||||||||| ||||||||||| Sbjct: 1202 gaaaaagtcagggctggtgagatgg 1226
>gb|AF485073.1| Galiella rufa strain A75-86 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 631 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 848 tcagccccatggaccagatgctctg 872 |||||||||||||||| |||||||| Sbjct: 212 tcagccccatggaccaaatgctctg 188
>gb|AF485071.1| Galiella rufa strain ATCC 200370 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 631 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 848 tcagccccatggaccagatgctctg 872 |||||||||||||||| |||||||| Sbjct: 212 tcagccccatggaccaaatgctctg 188
>emb|AL353615.37| Human DNA sequence from clone RP11-555H7 on chromosome 9 Contains a gene for a novel protein (MGC35463), complete sequence Length = 107891 Score = 42.1 bits (21), Expect = 5.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1244 tgcagtcccagctccactacaaaggctga 1272 |||||||||||| ||| |||||||||||| Sbjct: 80571 tgcagtcccagccccagtacaaaggctga 80599
>emb|AL080286.16|HSDJ655C4 Human DNA sequence from clone RP4-655C4 on chromosome 1p32.3-34.3 Contains a ferritin light polypeptide (FTL) pseudogene, complete sequence Length = 155278 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ctctcccacactccccactcc 43 ||||||||||||||||||||| Sbjct: 112694 ctctcccacactccccactcc 112674
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 659 cggtggcgctgctgctcatgg 679 ||||||||||||||||||||| Sbjct: 149341 cggtggcgctgctgctcatgg 149321
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 659 cggtggcgctgctgctcatgg 679 ||||||||||||||||||||| Sbjct: 102022 cggtggcgctgctgctcatgg 102002
>gb|AC012161.8|AC012161 Drosophila melanogaster, chromosome X, region 16B-16D, BAC clone BACR01I22, complete sequence Length = 173281 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 cggcgccatgatcccgctgct 632 ||||||||||||||||||||| Sbjct: 10946 cggcgccatgatcccgctgct 10966
>gb|AC011703.8|AC011703 Drosophila melanogaster, chromosome X, region 16A-16B, BAC clone BACR35P18, complete sequence Length = 163307 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 cggcgccatgatcccgctgct 632 ||||||||||||||||||||| Sbjct: 47280 cggcgccatgatcccgctgct 47300
>gb|AC011702.10|AC011702 Drosophila melanogaster, chromosome X, region 15F-16A, BAC clone BACR42I14, complete sequence Length = 167688 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 cggcgccatgatcccgctgct 632 ||||||||||||||||||||| Sbjct: 60927 cggcgccatgatcccgctgct 60947
>gb|AC175464.1| Mus musculus BAC clone RP23-129E4 from chromosome 16, complete sequence Length = 224605 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gtgctttcttcttcctcttcc 236 ||||||||||||||||||||| Sbjct: 213109 gtgctttcttcttcctcttcc 213089
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 ggagggaaaggtggtggcggg 375 ||||||||||||||||||||| Sbjct: 151096 ggagggaaaggtggtggcggg 151076
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 721 gagcaggtcaagaccggcaag 741 ||||||||||||||||||||| Sbjct: 6330451 gagcaggtcaagaccggcaag 6330471
>gb|AY075322.1| Drosophila melanogaster GH08937 full insert cDNA Length = 934 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 cggcgccatgatcccgctgct 632 ||||||||||||||||||||| Sbjct: 288 cggcgccatgatcccgctgct 308
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 ggagggaaaggtggtggcggg 375 ||||||||||||||||||||| Sbjct: 57293 ggagggaaaggtggtggcggg 57273
>gb|AC175032.1| Mus musculus BAC clone RP24-222L21 from chromosome 14, complete sequence Length = 204872 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 ggacagccaggggagggaaag 364 ||||||||||||||||||||| Sbjct: 1607 ggacagccaggggagggaaag 1587
>emb|AJ309806.1|TMO309806 Triticum monococcum 5S rRNA gene, clone Tmone20 Length = 367 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1249 tcccagctccactacaaaggc 1269 ||||||||||||||||||||| Sbjct: 87 tcccagctccactacaaaggc 67
>ref|XM_843002.1| Leishmania major strain Friedlin protein kinase (LMJ_0398) partial mRNA Length = 4557 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 793 tccagcatcgccgccatcgtc 813 ||||||||||||||||||||| Sbjct: 2808 tccagcatcgccgccatcgtc 2788
>emb|AL805897.13| Mouse DNA sequence from clone RP23-63D8 on chromosome 4, complete sequence Length = 231989 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1425 aaaagtcagggatggtgagat 1445 ||||||||||||||||||||| Sbjct: 3471 aaaagtcagggatggtgagat 3491
>gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome 14, complete sequence Length = 171474 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 ggacagccaggggagggaaag 364 ||||||||||||||||||||| Sbjct: 51258 ggacagccaggggagggaaag 51238 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 251,627,532 Number of extensions: 14878545 Number of successful extensions: 498339 Number of sequences better than 10.0: 69 Number of HSP's gapped: 498325 Number of HSP's successfully gapped: 83 Length of query: 1530 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1507 Effective length of database: 18,503,978,556 Effective search space: 27885495683892 Effective search space used: 27885495683892 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)