ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf3a13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001058428.1| Oryza sativa (japonica cultivar-group) Os03g... 521 e-144
2dbj|AK067600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 521 e-144
3dbj|AK060400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 521 e-144
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 276 2e-70
5gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 276 2e-70
6ref|NM_001065931.1| Oryza sativa (japonica cultivar-group) Os07g... 254 8e-64
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 254 8e-64
8dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic D... 254 8e-64
9dbj|AK064969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 8e-64
10gb|AY110457.1| Zea mays CL22317_1 mRNA sequence 117 1e-22
11gb|DQ245965.1| Zea mays clone 93628 mRNA sequence 62 6e-06
12gb|AY105569.1| Zea mays PCO107462 mRNA sequence 62 6e-06
13emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 54 0.002
14emb|CT830671.1| Oryza sativa (indica cultivar-group) cDNA clone:... 48 0.094
15ref|NM_001064147.1| Oryza sativa (japonica cultivar-group) Os06g... 48 0.094
16ref|NM_001053224.1| Oryza sativa (japonica cultivar-group) Os02g... 48 0.094
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.094
18dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.094
19dbj|AK070852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.094
20dbj|AK067188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.094
21dbj|AK063619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.094
22gb|AC092291.3| Homo sapiens chromosome 16 clone CTD-2502C11, com... 46 0.37
23gb|AC107075.4| Homo sapiens BAC clone RP11-452N17 from 2, comple... 46 0.37
24emb|AM402966.1| Pseudomonas stutzeri narX gene (partial), narK o... 44 1.5
25ref|XM_586169.2| PREDICTED: Bos taurus similar to lung cancer me... 44 1.5
26ref|XM_864023.1| PREDICTED: Bos taurus similar to lung cancer me... 44 1.5
27ref|XM_871875.1| PREDICTED: Bos taurus similar to lung cancer me... 44 1.5
28gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosom... 44 1.5
29gb|AY051399.1| Haemophilus influenzae strain 48P29H1 outer membr... 44 1.5
30gb|AC013652.8| Homo sapiens chromosome 15, clone RP11-462P6, com... 44 1.5
31gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete c... 44 1.5
32dbj|AB110611.1| Pseudomonas sp. MT-1 nar gene cluster (orf1, orf... 44 1.5
33ref|XM_310875.2| Anopheles gambiae str. PEST ENSANGP00000012545 ... 44 1.5
34gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, comple... 44 1.5
35emb|CT030159.11| Mouse DNA sequence from clone RP24-145F3 on chr... 42 5.8
36gb|AE014298.4| Drosophila melanogaster chromosome X, complete se... 42 5.8
37ref|XM_974224.1| PREDICTED: Mus musculus RIKEN cDNA 1110018J18 g... 42 5.8
38ref|XM_974265.1| PREDICTED: Mus musculus RIKEN cDNA 1110018J18 g... 42 5.8
39gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 42 5.8
40gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 5.8
41gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosom... 42 5.8
42gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, comp... 42 5.8
43ref|NM_133000.2| Drosophila melanogaster CG5703-RA (CG5703), mRNA 42 5.8
44dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 42 5.8
45dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 5.8
46dbj|AK145073.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 42 5.8
47gb|CP000249.1| Frankia sp. CcI3, complete genome 42 5.8
48dbj|AK145867.1| Mus musculus 14 days embryo liver cDNA, RIKEN fu... 42 5.8
49dbj|AK148379.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-len... 42 5.8
50dbj|AK168701.1| Mus musculus 16 days embryo heart cDNA, RIKEN fu... 42 5.8
51gb|AF485073.1| Galiella rufa strain A75-86 18S ribosomal RNA gen... 42 5.8
52gb|AF485071.1| Galiella rufa strain ATCC 200370 18S ribosomal RN... 42 5.8
53emb|AL353615.37| Human DNA sequence from clone RP11-555H7 on chr... 42 5.8
54emb|AL080286.16|HSDJ655C4 Human DNA sequence from clone RP4-655C... 42 5.8
55emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ... 42 5.8
56emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 42 5.8
57gb|AC012161.8|AC012161 Drosophila melanogaster, chromosome X, re... 42 5.8
58gb|AC011703.8|AC011703 Drosophila melanogaster, chromosome X, re... 42 5.8
59gb|AC011702.10|AC011702 Drosophila melanogaster, chromosome X, r... 42 5.8
60gb|AC175464.1| Mus musculus BAC clone RP23-129E4 from chromosome... 42 5.8
61dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.8
62dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 5.8
63gb|AY075322.1| Drosophila melanogaster GH08937 full insert cDNA 42 5.8
64dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.8
65gb|AC175032.1| Mus musculus BAC clone RP24-222L21 from chromosom... 42 5.8
66emb|AJ309806.1|TMO309806 Triticum monococcum 5S rRNA gene, clone... 42 5.8
67ref|XM_843002.1| Leishmania major strain Friedlin protein kinase... 42 5.8
68emb|AL805897.13| Mouse DNA sequence from clone RP23-63D8 on chro... 42 5.8
69gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome... 42 5.8

>ref|NM_001058428.1| Oryza sativa (japonica cultivar-group) Os03g0848400 (Os03g0848400)
            mRNA, complete cds
          Length = 1634
 Score =  521 bits (263), Expect = e-144
 Identities = 551/647 (85%)
 Strand = Plus / Plus

                                                                        
Query: 627  gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686
            |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| |
Sbjct: 562  gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 621

                                                                        
Query: 687  cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746
             || |||||||||||| |||| |||||||||||||||||||  ||||| || ||||||||
Sbjct: 622  ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 681

                                                                        
Query: 747  cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806
             || || || |||||||| |||||||||||||| || ||||||||||||||| |||||  
Sbjct: 682  ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 741

                                                                        
Query: 807  catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866
            |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| |
Sbjct: 742  catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 801

                                                                        
Query: 867  gctctggcggacgcacctcctcgaggcctcactcatcggatacacactattcctcgcgtt 926
            ||| |||||||| ||||||||||||||||| ||||||||||  || |||||||| || ||
Sbjct: 802  gctatggcggactcacctcctcgaggcctccctcatcggatttactctattccttgcatt 861

                                                                        
Query: 927  tgtcattgaccggttgcaccactaccttcagaagctcatcaccctcaggaaatcagccaa 986
            ||||||||||||||||||||||||||| |  || || || || || |||||| |||||||
Sbjct: 862  tgtcattgaccggttgcaccactacctccgaaaactgattacactgaggaaagcagccaa 921

                                                                        
Query: 987  catctccagggaggaggtcgagaagctacaaatggagaaccggtctttgcgcgagaagga 1046
            ||  || || |||||||||||||| || ||||||||||||||||  || || || |||||
Sbjct: 922  cacatcaagagaggaggtcgagaaacttcaaatggagaaccggttattccgtgaaaagga 981

                                                                        
Query: 1047 ggagaagtcggccagtgagatgaagaagcttcagcaggacatggcaaaactgagcgagga 1106
            |||||| ||  ||||||| || |||||||| || ||||| || || || || | ||||  
Sbjct: 982  ggagaaatcttccagtgaaatcaagaagctccaccaggagattgctaagctaaacgagag 1041

                                                                        
Query: 1107 catgaagaagctgaaatctgagtccgaagatcaccagaggaaagcgtctgacgcggaggc 1166
             ||||||||||||||||| ||||| ||||||||| ||||||| | ||  || ||||||||
Sbjct: 1042 tatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtgttggaagcggaggc 1101

                                                                        
Query: 1167 ccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgagtacgaccggctgct 1226
            |||||| |||||||| |||||||||||||||||||| ||||| ||||||||| || ||||
Sbjct: 1102 ccatgtgaacgccctacagaagcagtcggaggagcttctcctggagtacgacaggttgct 1161

                                                           
Query: 1227 ggaggacaaccagatcctgcagtcccagctccactacaaaggctgaa 1273
            ||| ||||||||||| || || || ||||| ||||||||||||||||
Sbjct: 1162 ggaagacaaccagattctacaatctcagcttcactacaaaggctgaa 1208



to top

>dbj|AK067600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111M09, full
            insert sequence
          Length = 1635

 Score =  521 bits (263), Expect = e-144
 Identities = 551/647 (85%)
 Strand = Plus / Plus

                                                                        
Query: 627  gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686
            |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| |
Sbjct: 563  gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 622

                                                                        
Query: 687  cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746
             || |||||||||||| |||| |||||||||||||||||||  ||||| || ||||||||
Sbjct: 623  ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 682

                                                                        
Query: 747  cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806
             || || || |||||||| |||||||||||||| || ||||||||||||||| |||||  
Sbjct: 683  ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 742

                                                                        
Query: 807  catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866
            |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| |
Sbjct: 743  catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 802

                                                                        
Query: 867  gctctggcggacgcacctcctcgaggcctcactcatcggatacacactattcctcgcgtt 926
            ||| |||||||| ||||||||||||||||| ||||||||||  || |||||||| || ||
Sbjct: 803  gctatggcggactcacctcctcgaggcctccctcatcggatttactctattccttgcatt 862

                                                                        
Query: 927  tgtcattgaccggttgcaccactaccttcagaagctcatcaccctcaggaaatcagccaa 986
            ||||||||||||||||||||||||||| |  || || || || || |||||| |||||||
Sbjct: 863  tgtcattgaccggttgcaccactacctccgaaaactgattacactgaggaaagcagccaa 922

                                                                        
Query: 987  catctccagggaggaggtcgagaagctacaaatggagaaccggtctttgcgcgagaagga 1046
            ||  || || |||||||||||||| || ||||||||||||||||  || || || |||||
Sbjct: 923  cacatcaagagaggaggtcgagaaacttcaaatggagaaccggttattccgtgaaaagga 982

                                                                        
Query: 1047 ggagaagtcggccagtgagatgaagaagcttcagcaggacatggcaaaactgagcgagga 1106
            |||||| ||  ||||||| || |||||||| || ||||| || || || || | ||||  
Sbjct: 983  ggagaaatcttccagtgaaatcaagaagctccaccaggagattgctaagctaaacgagag 1042

                                                                        
Query: 1107 catgaagaagctgaaatctgagtccgaagatcaccagaggaaagcgtctgacgcggaggc 1166
             ||||||||||||||||| ||||| ||||||||| ||||||| | ||  || ||||||||
Sbjct: 1043 tatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtgttggaagcggaggc 1102

                                                                        
Query: 1167 ccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgagtacgaccggctgct 1226
            |||||| |||||||| |||||||||||||||||||| ||||| ||||||||| || ||||
Sbjct: 1103 ccatgtgaacgccctacagaagcagtcggaggagcttctcctggagtacgacaggttgct 1162

                                                           
Query: 1227 ggaggacaaccagatcctgcagtcccagctccactacaaaggctgaa 1273
            ||| ||||||||||| || || || ||||| ||||||||||||||||
Sbjct: 1163 ggaagacaaccagattctacaatctcagcttcactacaaaggctgaa 1209



to top

>dbj|AK060400.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-B10, full
            insert sequence
          Length = 1412

 Score =  521 bits (263), Expect = e-144
 Identities = 551/647 (85%)
 Strand = Plus / Plus

                                                                        
Query: 627  gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686
            |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| |
Sbjct: 407  gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 466

                                                                        
Query: 687  cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746
             || |||||||||||| |||| |||||||||||||||||||  ||||| || ||||||||
Sbjct: 467  ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 526

                                                                        
Query: 747  cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806
             || || || |||||||| |||||||||||||| || ||||||||||||||| |||||  
Sbjct: 527  ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 586

                                                                        
Query: 807  catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866
            |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| |
Sbjct: 587  catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 646

                                                                        
Query: 867  gctctggcggacgcacctcctcgaggcctcactcatcggatacacactattcctcgcgtt 926
            ||| |||||||| ||||||||||||||||| ||||||||||  || |||||||| || ||
Sbjct: 647  gctatggcggactcacctcctcgaggcctccctcatcggatttactctattccttgcatt 706

                                                                        
Query: 927  tgtcattgaccggttgcaccactaccttcagaagctcatcaccctcaggaaatcagccaa 986
            ||||||||||||||||||||||||||| |  || || || || || |||||| |||||||
Sbjct: 707  tgtcattgaccggttgcaccactacctccgaaaactgattacactgaggaaagcagccaa 766

                                                                        
Query: 987  catctccagggaggaggtcgagaagctacaaatggagaaccggtctttgcgcgagaagga 1046
            ||  || || |||||||||||||| || ||||||||||||||||  || || || |||||
Sbjct: 767  cacatcaagagaggaggtcgagaaacttcaaatggagaaccggttattccgtgaaaagga 826

                                                                        
Query: 1047 ggagaagtcggccagtgagatgaagaagcttcagcaggacatggcaaaactgagcgagga 1106
            |||||| ||  ||||||| || |||||||| || ||||| || || || || | ||||  
Sbjct: 827  ggagaaatcttccagtgaaatcaagaagctccaccaggagattgctaagctaaacgagag 886

                                                                        
Query: 1107 catgaagaagctgaaatctgagtccgaagatcaccagaggaaagcgtctgacgcggaggc 1166
             ||||||||||||||||| ||||| ||||||||| ||||||| | ||  || ||||||||
Sbjct: 887  tatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtgttggaagcggaggc 946

                                                                        
Query: 1167 ccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgagtacgaccggctgct 1226
            |||||| |||||||| |||||||||||||||||||| ||||| ||||||||| || ||||
Sbjct: 947  ccatgtgaacgccctacagaagcagtcggaggagcttctcctggagtacgacaggttgct 1006

                                                           
Query: 1227 ggaggacaaccagatcctgcagtcccagctccactacaaaggctgaa 1273
            ||| ||||||||||| || || || ||||| ||||||||||||||||
Sbjct: 1007 ggaagacaaccagattctacaatctcagcttcactacaaaggctgaa 1053



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  276 bits (139), Expect = 2e-70
 Identities = 244/279 (87%)
 Strand = Plus / Minus

                                                                            
Query: 627      gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686
                |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| |
Sbjct: 35462374 gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 35462315

                                                                            
Query: 687      cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746
                 || |||||||||||| |||| |||||||||||||||||||  ||||| || ||||||||
Sbjct: 35462314 ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 35462255

                                                                            
Query: 747      cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806
                 || || || |||||||| |||||||||||||| || ||||||||||||||| |||||  
Sbjct: 35462254 ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 35462195

                                                                            
Query: 807      catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866
                |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| |
Sbjct: 35462194 catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 35462135

                                                       
Query: 867      gctctggcggacgcacctcctcgaggcctcactcatcgg 905
                ||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 35462134 gctatggcggactcacctcctcgaggcctccctcatcgg 35462096



 Score =  256 bits (129), Expect = 2e-64
 Identities = 303/361 (83%)
 Strand = Plus / Minus

                                                                            
Query: 913      ctattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatcaccctc 972
                |||||||| || ||||||||||||||||||||||||||||| |  || || || || || 
Sbjct: 35460640 ctattccttgcatttgtcattgaccggttgcaccactacctccgaaaactgattacactg 35460581

                                                                            
Query: 973      aggaaatcagccaacatctccagggaggaggtcgagaagctacaaatggagaaccggtct 1032
                |||||| |||||||||  || || |||||||||||||| || ||||||||||||||||  
Sbjct: 35460580 aggaaagcagccaacacatcaagagaggaggtcgagaaacttcaaatggagaaccggtta 35460521

                                                                            
Query: 1033     ttgcgcgagaaggaggagaagtcggccagtgagatgaagaagcttcagcaggacatggca 1092
                || || || ||||||||||| ||  ||||||| || |||||||| || ||||| || || 
Sbjct: 35460520 ttccgtgaaaaggaggagaaatcttccagtgaaatcaagaagctccaccaggagattgct 35460461

                                                                            
Query: 1093     aaactgagcgaggacatgaagaagctgaaatctgagtccgaagatcaccagaggaaagcg 1152
                || || | ||||   ||||||||||||||||| ||||| ||||||||| ||||||| | |
Sbjct: 35460460 aagctaaacgagagtatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtg 35460401

                                                                            
Query: 1153     tctgacgcggaggcccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgag 1212
                |  || |||||||||||||| |||||||| |||||||||||||||||||| ||||| |||
Sbjct: 35460400 ttggaagcggaggcccatgtgaacgccctacagaagcagtcggaggagcttctcctggag 35460341

                                                                            
Query: 1213     tacgaccggctgctggaggacaaccagatcctgcagtcccagctccactacaaaggctga 1272
                |||||| || ||||||| ||||||||||| || || || ||||| |||||||||||||||
Sbjct: 35460340 tacgacaggttgctggaagacaaccagattctacaatctcagcttcactacaaaggctga 35460281

                 
Query: 1273     a 1273
                |
Sbjct: 35460280 a 35460280



to top

>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
              sequence
          Length = 133846

 Score =  276 bits (139), Expect = 2e-70
 Identities = 244/279 (87%)
 Strand = Plus / Plus

                                                                          
Query: 627    gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686
              |||||||||| ||||| |||| ||||||| |||||||||||||||||| ||||| ||| |
Sbjct: 115324 gctgctgttcttggtggtgttggcggaggcggcggtggcgctgctgctgatggtgaaggt 115383

                                                                          
Query: 687    cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746
               || |||||||||||| |||| |||||||||||||||||||  ||||| || ||||||||
Sbjct: 115384 ggggccgctgcgggaggtggcgatgcgcggcgtggagcaggcgaagacggggaagggccc 115443

                                                                          
Query: 747    cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806
               || || || |||||||| |||||||||||||| || ||||||||||||||| |||||  
Sbjct: 115444 ggcgacggtgaagacgctggcctgcacgctctcggtgatcctcatgtccagcgtcgccag 115503

                                                                          
Query: 807    catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866
              |||| ||| ||||||||||||||| | |||| |||||| ||||||||||||||||||| |
Sbjct: 115504 catcctcaagatccagaacaggggcctcaagctcggcaccgtcagccccatggaccaggt 115563

                                                     
Query: 867    gctctggcggacgcacctcctcgaggcctcactcatcgg 905
              ||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 115564 gctatggcggactcacctcctcgaggcctccctcatcgg 115602



 Score =  256 bits (129), Expect = 2e-64
 Identities = 303/361 (83%)
 Strand = Plus / Plus

                                                                          
Query: 913    ctattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatcaccctc 972
              |||||||| || ||||||||||||||||||||||||||||| |  || || || || || 
Sbjct: 117058 ctattccttgcatttgtcattgaccggttgcaccactacctccgaaaactgattacactg 117117

                                                                          
Query: 973    aggaaatcagccaacatctccagggaggaggtcgagaagctacaaatggagaaccggtct 1032
              |||||| |||||||||  || || |||||||||||||| || ||||||||||||||||  
Sbjct: 117118 aggaaagcagccaacacatcaagagaggaggtcgagaaacttcaaatggagaaccggtta 117177

                                                                          
Query: 1033   ttgcgcgagaaggaggagaagtcggccagtgagatgaagaagcttcagcaggacatggca 1092
              || || || ||||||||||| ||  ||||||| || |||||||| || ||||| || || 
Sbjct: 117178 ttccgtgaaaaggaggagaaatcttccagtgaaatcaagaagctccaccaggagattgct 117237

                                                                          
Query: 1093   aaactgagcgaggacatgaagaagctgaaatctgagtccgaagatcaccagaggaaagcg 1152
              || || | ||||   ||||||||||||||||| ||||| ||||||||| ||||||| | |
Sbjct: 117238 aagctaaacgagagtatgaagaagctgaaatcggagtctgaagatcacgagaggaaggtg 117297

                                                                          
Query: 1153   tctgacgcggaggcccatgtcaacgccctgcagaagcagtcggaggagctgctcctcgag 1212
              |  || |||||||||||||| |||||||| |||||||||||||||||||| ||||| |||
Sbjct: 117298 ttggaagcggaggcccatgtgaacgccctacagaagcagtcggaggagcttctcctggag 117357

                                                                          
Query: 1213   tacgaccggctgctggaggacaaccagatcctgcagtcccagctccactacaaaggctga 1272
              |||||| || ||||||| ||||||||||| || || || ||||| |||||||||||||||
Sbjct: 117358 tacgacaggttgctggaagacaaccagattctacaatctcagcttcactacaaaggctga 117417

               
Query: 1273   a 1273
              |
Sbjct: 117418 a 117418



to top

>ref|NM_001065931.1| Oryza sativa (japonica cultivar-group) Os07g0291200 (Os07g0291200)
           mRNA, partial cds
          Length = 4007

 Score =  254 bits (128), Expect = 8e-64
 Identities = 239/276 (86%)
 Strand = Plus / Plus

                                                                       
Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686
           |||||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||
Sbjct: 508 gctgctgttcctggtgctgttcgcggagggcgcggcggcgctgctgctgatggtgaagat 567

                                                                       
Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746
           ||| ||||||||||||||||| ||||||||||||||||||| ||||  ||| || |||||
Sbjct: 568 cgggccgctgcgggagctggcgatgcgcggcgtggagcaggccaaggacggtaaaggccc 627

                                                                       
Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806
           |||  | || |||||||| || ||||||||   ||||||| ||||||||||| |||||  
Sbjct: 628 cgcggcggtgaagacgctggcgtgcacgctgctcgtcatcttcatgtccagcgtcgccag 687

                                                                       
Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866
           |||| || ||||||||||| | ||   |||| |||||| ||||||||||||||||||| |
Sbjct: 688 catcctccggatccagaaccgcggcatcaagctcggcaccgtcagccccatggaccaggt 747

                                               
Query: 867 gctctggcggacgcacctcctcgaggcctcactcat 902
           ||| ||||||||||||||||||||||| || |||||
Sbjct: 748 gctatggcggacgcacctcctcgaggcttccctcat 783



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                        
Query: 907  tacacactattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatc 966
            |||| ||||||||| || ||||||||||| ||||| ||||||||||  | |||||| |  
Sbjct: 3558 tacatactattccttgcatttgtcattgatcggttacaccactaccaccggaagctgact 3617

                                                                 
Query: 967  accctcaggaaatcagccaacatctccagggaggaggtcgagaagctacaaat 1019
            |  || | |||| | || |||| ||||||||||||||| ||||| ||||||||
Sbjct: 3618 atactgaagaaaaccgcaaacacctccagggaggaggttgagaaactacaaat 3670



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  254 bits (128), Expect = 8e-64
 Identities = 239/276 (86%)
 Strand = Plus / Minus

                                                                            
Query: 627      gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686
                |||||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||
Sbjct: 11323696 gctgctgttcctggtgctgttcgcggagggcgcggcggcgctgctgctgatggtgaagat 11323637

                                                                            
Query: 687      cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746
                ||| ||||||||||||||||| ||||||||||||||||||| ||||  ||| || |||||
Sbjct: 11323636 cgggccgctgcgggagctggcgatgcgcggcgtggagcaggccaaggacggtaaaggccc 11323577

                                                                            
Query: 747      cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806
                |||  | || |||||||| || ||||||||   ||||||| ||||||||||| |||||  
Sbjct: 11323576 cgcggcggtgaagacgctggcgtgcacgctgctcgtcatcttcatgtccagcgtcgccag 11323517

                                                                            
Query: 807      catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866
                |||| || ||||||||||| | ||   |||| |||||| ||||||||||||||||||| |
Sbjct: 11323516 catcctccggatccagaaccgcggcatcaagctcggcaccgtcagccccatggaccaggt 11323457

                                                    
Query: 867      gctctggcggacgcacctcctcgaggcctcactcat 902
                ||| ||||||||||||||||||||||| || |||||
Sbjct: 11323456 gctatggcggacgcacctcctcgaggcttccctcat 11323421



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                            
Query: 907      tacacactattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatc 966
                |||| ||||||||| || ||||||||||| ||||| ||||||||||  | |||||| |  
Sbjct: 11320646 tacatactattccttgcatttgtcattgatcggttacaccactaccaccggaagctgact 11320587

                                                                     
Query: 967      accctcaggaaatcagccaacatctccagggaggaggtcgagaagctacaaat 1019
                |  || | |||| | || |||| ||||||||||||||| ||||| ||||||||
Sbjct: 11320586 atactgaagaaaaccgcaaacacctccagggaggaggttgagaaactacaaat 11320534



to top

>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0656C04
          Length = 143411

 Score =  254 bits (128), Expect = 8e-64
 Identities = 239/276 (86%)
 Strand = Plus / Minus

                                                                         
Query: 627   gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686
             |||||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||
Sbjct: 24207 gctgctgttcctggtgctgttcgcggagggcgcggcggcgctgctgctgatggtgaagat 24148

                                                                         
Query: 687   cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746
             ||| ||||||||||||||||| ||||||||||||||||||| ||||  ||| || |||||
Sbjct: 24147 cgggccgctgcgggagctggcgatgcgcggcgtggagcaggccaaggacggtaaaggccc 24088

                                                                         
Query: 747   cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806
             |||  | || |||||||| || ||||||||   ||||||| ||||||||||| |||||  
Sbjct: 24087 cgcggcggtgaagacgctggcgtgcacgctgctcgtcatcttcatgtccagcgtcgccag 24028

                                                                         
Query: 807   catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866
             |||| || ||||||||||| | ||   |||| |||||| ||||||||||||||||||| |
Sbjct: 24027 catcctccggatccagaaccgcggcatcaagctcggcaccgtcagccccatggaccaggt 23968

                                                 
Query: 867   gctctggcggacgcacctcctcgaggcctcactcat 902
             ||| ||||||||||||||||||||||| || |||||
Sbjct: 23967 gctatggcggacgcacctcctcgaggcttccctcat 23932



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                         
Query: 907   tacacactattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatc 966
             |||| ||||||||| || ||||||||||| ||||| ||||||||||  | |||||| |  
Sbjct: 21157 tacatactattccttgcatttgtcattgatcggttacaccactaccaccggaagctgact 21098

                                                                  
Query: 967   accctcaggaaatcagccaacatctccagggaggaggtcgagaagctacaaat 1019
             |  || | |||| | || |||| ||||||||||||||| ||||| ||||||||
Sbjct: 21097 atactgaagaaaaccgcaaacacctccagggaggaggttgagaaactacaaat 21045



to top

>dbj|AK064969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B09, full
           insert sequence
          Length = 4008

 Score =  254 bits (128), Expect = 8e-64
 Identities = 239/276 (86%)
 Strand = Plus / Plus

                                                                       
Query: 627 gctgctgttcctggtgctgttcgcggagggggcggtggcgctgctgctcatggtcaagat 686
           |||||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||
Sbjct: 509 gctgctgttcctggtgctgttcgcggagggcgcggcggcgctgctgctgatggtgaagat 568

                                                                       
Query: 687 cggcccgctgcgggagctggccatgcgcggcgtggagcaggtcaagaccggcaagggccc 746
           ||| ||||||||||||||||| ||||||||||||||||||| ||||  ||| || |||||
Sbjct: 569 cgggccgctgcgggagctggcgatgcgcggcgtggagcaggccaaggacggtaaaggccc 628

                                                                       
Query: 747 cgccaccgtcaagacgctcgcctgcacgctctccgtcatcctcatgtccagcatcgccgc 806
           |||  | || |||||||| || ||||||||   ||||||| ||||||||||| |||||  
Sbjct: 629 cgcggcggtgaagacgctggcgtgcacgctgctcgtcatcttcatgtccagcgtcgccag 688

                                                                       
Query: 807 catcgtcaggatccagaacaggggacacaagatcggcaacgtcagccccatggaccagat 866
           |||| || ||||||||||| | ||   |||| |||||| ||||||||||||||||||| |
Sbjct: 689 catcctccggatccagaaccgcggcatcaagctcggcaccgtcagccccatggaccaggt 748

                                               
Query: 867 gctctggcggacgcacctcctcgaggcctcactcat 902
           ||| ||||||||||||||||||||||| || |||||
Sbjct: 749 gctatggcggacgcacctcctcgaggcttccctcat 784



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                        
Query: 907  tacacactattcctcgcgtttgtcattgaccggttgcaccactaccttcagaagctcatc 966
            |||| ||||||||| || ||||||||||| ||||| ||||||||||  | |||||| |  
Sbjct: 3559 tacatactattccttgcatttgtcattgatcggttacaccactaccaccggaagctgact 3618

                                                                 
Query: 967  accctcaggaaatcagccaacatctccagggaggaggtcgagaagctacaaat 1019
            |  || | |||| | || |||| ||||||||||||||| ||||| ||||||||
Sbjct: 3619 atactgaagaaaaccgcaaacacctccagggaggaggttgagaaactacaaat 3671



to top

>gb|AY110457.1| Zea mays CL22317_1 mRNA sequence
          Length = 839

 Score =  117 bits (59), Expect = 1e-22
 Identities = 152/183 (83%)
 Strand = Plus / Plus

                                                                        
Query: 884  tcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccggttgc 943
            |||||||||| || |||||||||||||| |||||||| || ||||| || |||||| |||
Sbjct: 84   tcctcgaggcatccctcatcggatacacgctattccttgcatttgtaatcgaccggctgc 143

                                                                        
Query: 944  accactaccttcagaagctcatcaccctcaggaaatcagccaacatctccagggaggagg 1003
            |||||||||| |  ||||| || ||||| |||||| || ||| ||  ||||| |||||||
Sbjct: 144  accactacctgcgaaagctgatgaccctgaggaaaacatccagcacatccagagaggagg 203

                                                                        
Query: 1004 tcgagaagctacaaatggagaaccggtctttgcgcgagaaggaggagaagtcggccagtg 1063
            | ||||| || || ||||||||||||||  | ||||| ||||||||||| ||  ||||||
Sbjct: 204  tggagaaacttcagatggagaaccggtcgctccgcgaaaaggaggagaaatcctccagtg 263

               
Query: 1064 aga 1066
            |||
Sbjct: 264  aga 266



 Score =  111 bits (56), Expect = 8e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1118 tgaaatctgagtccgaagatcaccagaggaaagcgtctgacgcggaggcccatgtcaacg 1177
            ||||||||||| ||||||| ||| ||||||| ||||| |  || |||||||||||| |||
Sbjct: 318  tgaaatctgagaccgaagagcacgagaggaaggcgtcggtggcagaggcccatgtcgacg 377

                                                    
Query: 1178 ccctgcagaagcagtcggaggagctgctcctcgagtacga 1217
            | ||||||||||||||||||||||||||||| ||||||||
Sbjct: 378  cgctgcagaagcagtcggaggagctgctcctggagtacga 417



to top

>gb|DQ245965.1| Zea mays clone 93628 mRNA sequence
          Length = 845

 Score = 61.9 bits (31), Expect = 6e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 880 cacctcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccgg 939
           |||||||||||||| |||||||| |||||| |  ||||||| || || ||||||||||||
Sbjct: 357 cacctcctcgaggcgtcactcatgggatactccttattccttgctttagtcattgaccgg 416

                      
Query: 940 ttgcaccacta 950
            ||||| ||||
Sbjct: 417 ctgcacaacta 427



to top

>gb|AY105569.1| Zea mays PCO107462 mRNA sequence
          Length = 1024

 Score = 61.9 bits (31), Expect = 6e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 880 cacctcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccgg 939
           |||||||||||||| |||||||| |||||| |  ||||||| || || ||||||||||||
Sbjct: 466 cacctcctcgaggcgtcactcatgggatactccttattccttgctttagtcattgaccgg 525

                      
Query: 940 ttgcaccacta 950
            ||||| ||||
Sbjct: 526 ctgcacaacta 536



to top

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 54.0 bits (27), Expect = 0.002
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 748    gccaccgtcaagacgctcgcctgcacgctct 778
              |||||||||||||||| ||||||||||||||
Sbjct: 369356 gccaccgtcaagacgcacgcctgcacgctct 369386



to top

>emb|CT830671.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130P23, full
           insert sequence
          Length = 1171

 Score = 48.1 bits (24), Expect = 0.094
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666
           ||||||| ||||||||||||||||||  | ||||||| ||| ||||||
Sbjct: 207 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 254



to top

>ref|NM_001064147.1| Oryza sativa (japonica cultivar-group) Os06g0367500 (Os06g0367500)
           mRNA, partial cds
          Length = 1070

 Score = 48.1 bits (24), Expect = 0.094
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 880 cacctcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccgg 939
           ||||||||||||||||| ||||| |||||| |  ||||||| ||  | ||||||||||||
Sbjct: 259 cacctcctcgaggcctcgctcatgggatactccttattccttgctctggtcattgaccgg 318



to top

>ref|NM_001053224.1| Oryza sativa (japonica cultivar-group) Os02g0321800 (Os02g0321800)
           mRNA, complete cds
          Length = 1187

 Score = 48.1 bits (24), Expect = 0.094
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666
           ||||||| ||||||||||||||||||  | ||||||| ||| ||||||
Sbjct: 192 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 239



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.094
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 619      atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666
                ||||||| ||||||||||||||||||  | ||||||| ||| ||||||
Sbjct: 12859101 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 12859148



 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 355      ggagggaaaggtggtggcggg 375
                |||||||||||||||||||||
Sbjct: 27671427 ggagggaaaggtggtggcggg 27671407



to top

>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0073A18
          Length = 176755

 Score = 48.1 bits (24), Expect = 0.094
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 619   atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666
             ||||||| ||||||||||||||||||  | ||||||| ||| ||||||
Sbjct: 78583 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 78630



to top

>dbj|AK070852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065A17, full
           insert sequence
          Length = 1188

 Score = 48.1 bits (24), Expect = 0.094
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666
           ||||||| ||||||||||||||||||  | ||||||| ||| ||||||
Sbjct: 193 atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 240



to top

>dbj|AK067188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K24, full
           insert sequence
          Length = 1112

 Score = 48.1 bits (24), Expect = 0.094
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 619 atgatcccgctgctgttcctggtgctgttcgcggagggggcggtggcg 666
           ||||||| ||||||||||||||||||  | ||||||| ||| ||||||
Sbjct: 93  atgatccagctgctgttcctggtgctcgtggcggaggcggccgtggcg 140



to top

>dbj|AK063619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-E03, full
           insert sequence
          Length = 1070

 Score = 48.1 bits (24), Expect = 0.094
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 880 cacctcctcgaggcctcactcatcggatacacactattcctcgcgtttgtcattgaccgg 939
           ||||||||||||||||| ||||| |||||| |  ||||||| ||  | ||||||||||||
Sbjct: 259 cacctcctcgaggcctcgctcatgggatactccttattccttgctctggtcattgaccgg 318



to top

>gb|AC092291.3| Homo sapiens chromosome 16 clone CTD-2502C11, complete sequence
          Length = 194551

 Score = 46.1 bits (23), Expect = 0.37
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 355   ggagggaaaggtggtggcgggtt 377
             |||||||||||||||||||||||
Sbjct: 66018 ggagggaaaggtggtggcgggtt 66040



to top

>gb|AC107075.4| Homo sapiens BAC clone RP11-452N17 from 2, complete sequence
          Length = 176425

 Score = 46.1 bits (23), Expect = 0.37
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 1392   tgtgtgttctgtagttttgtttt 1414
              |||||||||||||||||||||||
Sbjct: 134753 tgtgtgttctgtagttttgtttt 134775



to top

>emb|AM402966.1| Pseudomonas stutzeri narX gene (partial), narK operon and narG gene
            (partial), strain ATCC14405
          Length = 4585

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 629  tgctgttcctggtgctgttcgc 650
            ||||||||||||||||||||||
Sbjct: 1650 tgctgttcctggtgctgttcgc 1671



to top

>ref|XM_586169.2| PREDICTED: Bos taurus similar to lung cancer metastasis-related
           protein 1 homolog, transcript variant 1 (LOC509245),
           mRNA
          Length = 1530

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 219 ctttcttcttcctcttccgctc 240
           ||||||||||||||||||||||
Sbjct: 663 ctttcttcttcctcttccgctc 642



to top

>ref|XM_864023.1| PREDICTED: Bos taurus similar to lung cancer metastasis-related
           protein 1 homolog, transcript variant 2 (LOC509245),
           mRNA
          Length = 705

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 219 ctttcttcttcctcttccgctc 240
           ||||||||||||||||||||||
Sbjct: 662 ctttcttcttcctcttccgctc 641



to top

>ref|XM_871875.1| PREDICTED: Bos taurus similar to lung cancer metastasis-related
            protein 1 homolog, transcript variant 3 (LOC509245), mRNA
          Length = 1957

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 219  ctttcttcttcctcttccgctc 240
            ||||||||||||||||||||||
Sbjct: 1090 ctttcttcttcctcttccgctc 1069



to top

>gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosome 12, complete sequence
          Length = 157411

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 205    tcagagacgaggtgctttcttc 226
              ||||||||||||||||||||||
Sbjct: 154832 tcagagacgaggtgctttcttc 154811



to top

>gb|AY051399.1| Haemophilus influenzae strain 48P29H1 outer membrane protein P2
           (ompP2) gene, partial cds
          Length = 1050

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 627 gctgctgttcctggtgctgttc 648
           ||||||||||||||||||||||
Sbjct: 490 gctgctgttcctggtgctgttc 511



to top

>gb|AC013652.8| Homo sapiens chromosome 15, clone RP11-462P6, complete sequence
          Length = 189761

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1420  actgaaaaagtcagggatggtgagat 1445
             ||||||||||||||||| ||||||||
Sbjct: 50023 actgaaaaagtcagggagggtgagat 50048



to top

>gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete cds; NarL-like (narL)
            and NarX-like (narX) genes, complete sequence; NarK
            (narK), NarM (narM), NarG (narG), NarH (narH), NarJ
            (narJ), and NarI (narI) genes, complete cds; and unknown
            gene
          Length = 15150

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 629  tgctgttcctggtgctgttcgc 650
            ||||||||||||||||||||||
Sbjct: 5917 tgctgttcctggtgctgttcgc 5938



to top

>dbj|AB110611.1| Pseudomonas sp. MT-1 nar gene cluster (orf1, orf2, orf3, narL, narX,
            narK, orf4, narM, narG, narH, narJ, narI, nifM), partial
            and complete cds
          Length = 15819

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 629  tgctgttcctggtgctgttcgc 650
            ||||||||||||||||||||||
Sbjct: 6132 tgctgttcctggtgctgttcgc 6153



to top

>ref|XM_310875.2| Anopheles gambiae str. PEST ENSANGP00000012545 (ENSANGG00000010056),
            partial mRNA
          Length = 759

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 1210 gagtacgaccggctgctggaggacaaccag 1239
            |||||||||||||||||| |||| ||||||
Sbjct: 223  gagtacgaccggctgctgcaggagaaccag 252



to top

>gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, complete sequence
          Length = 167125

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 205    tcagagacgaggtgctttcttc 226
              ||||||||||||||||||||||
Sbjct: 122871 tcagagacgaggtgctttcttc 122892



to top

>emb|CT030159.11| Mouse DNA sequence from clone RP24-145F3 on chromosome 13, complete
             sequence
          Length = 203647

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1423  gaaaaagtcagggatggtgagatgg 1447
             ||||||||||||| |||||||||||
Sbjct: 85671 gaaaaagtcagggctggtgagatgg 85647



to top

>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence
          Length = 22422827

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 612      cggcgccatgatcccgctgct 632
                |||||||||||||||||||||
Sbjct: 17526790 cggcgccatgatcccgctgct 17526810



to top

>ref|XM_974224.1| PREDICTED: Mus musculus RIKEN cDNA 1110018J18 gene, transcript
            variant 6 (1110018J18Rik), mRNA
          Length = 2862

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1423 gaaaaagtcagggatggtgagatgg 1447
            ||||||||||||| |||||||||||
Sbjct: 1169 gaaaaagtcagggctggtgagatgg 1193



to top

>ref|XM_974265.1| PREDICTED: Mus musculus RIKEN cDNA 1110018J18 gene, transcript
            variant 2 (1110018J18Rik), mRNA
          Length = 2994

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1423 gaaaaagtcagggatggtgagatgg 1447
            ||||||||||||| |||||||||||
Sbjct: 1301 gaaaaagtcagggctggtgagatgg 1325



to top

>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 793    tccagcatcgccgccatcgtc 813
              |||||||||||||||||||||
Sbjct: 574403 tccagcatcgccgccatcgtc 574383



to top

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 367    ggtggcgggttcctgtccctccgcc 391
              ||||||||| |||||||||||||||
Sbjct: 648213 ggtggcgggatcctgtccctccgcc 648237



 Score = 42.1 bits (21), Expect = 5.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 628     ctgctgttcctggtgctgttcgcggaggg 656
               ||||||||||||  |||||||||||||||
Sbjct: 1868011 ctgctgttcctgacgctgttcgcggaggg 1867983



to top

>gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosome 14, complete
            sequence
          Length = 164905

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 344  ggacagccaggggagggaaag 364
            |||||||||||||||||||||
Sbjct: 5218 ggacagccaggggagggaaag 5238



to top

>gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, complete sequence
          Length = 225600

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1391   gtgtgtgttctgtagttttgttttg 1415
              |||||||| ||||||||||||||||
Sbjct: 194943 gtgtgtgtcctgtagttttgttttg 194967



to top

>ref|NM_133000.2| Drosophila melanogaster CG5703-RA (CG5703), mRNA
          Length = 1061

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 612 cggcgccatgatcccgctgct 632
           |||||||||||||||||||||
Sbjct: 466 cggcgccatgatcccgctgct 486



to top

>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 1345    tggctttcattcccctctctaactt 1369
               |||||||||||||||||||| ||||
Sbjct: 1684859 tggctttcattcccctctctcactt 1684835



to top

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1185    gaagcagtcggaggagctgct 1205
               |||||||||||||||||||||
Sbjct: 1034186 gaagcagtcggaggagctgct 1034206



 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1185    gaagcagtcggaggagctgct 1205
               |||||||||||||||||||||
Sbjct: 1067429 gaagcagtcggaggagctgct 1067449



to top

>dbj|AK145073.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length
            enriched library, clone:G830036L19 product:weakly similar
            to FmHP [Fugu rubripes], full insert sequence
          Length = 2555

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1423 gaaaaagtcagggatggtgagatgg 1447
            ||||||||||||| |||||||||||
Sbjct: 1321 gaaaaagtcagggctggtgagatgg 1345



to top

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 661     gtggcgctgctgctcatggtc 681
               |||||||||||||||||||||
Sbjct: 3951527 gtggcgctgctgctcatggtc 3951507



to top

>dbj|AK145867.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched
            library, clone:I530009M18 product:hypothetical protein,
            full insert sequence
          Length = 2858

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1423 gaaaaagtcagggatggtgagatgg 1447
            ||||||||||||| |||||||||||
Sbjct: 1192 gaaaaagtcagggctggtgagatgg 1216



to top

>dbj|AK148379.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library,
            clone:G370118M19 product:weakly similar to FmHP [Fugu
            rubripes], full insert sequence
          Length = 1649

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1423 gaaaaagtcagggatggtgagatgg 1447
            ||||||||||||| |||||||||||
Sbjct: 1302 gaaaaagtcagggctggtgagatgg 1326



to top

>dbj|AK168701.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:I920046F09 product:weakly similar to FmHP
            [Fugu rubripes], full insert sequence
          Length = 2894

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1423 gaaaaagtcagggatggtgagatgg 1447
            ||||||||||||| |||||||||||
Sbjct: 1202 gaaaaagtcagggctggtgagatgg 1226



to top

>gb|AF485073.1| Galiella rufa strain A75-86 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence; and 26S ribosomal RNA gene, partial sequence
          Length = 631

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 848 tcagccccatggaccagatgctctg 872
           |||||||||||||||| ||||||||
Sbjct: 212 tcagccccatggaccaaatgctctg 188



to top

>gb|AF485071.1| Galiella rufa strain ATCC 200370 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence; and 26S ribosomal RNA gene, partial sequence
          Length = 631

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 848 tcagccccatggaccagatgctctg 872
           |||||||||||||||| ||||||||
Sbjct: 212 tcagccccatggaccaaatgctctg 188



to top

>emb|AL353615.37| Human DNA sequence from clone RP11-555H7 on chromosome 9 Contains a
             gene for a novel protein (MGC35463), complete sequence
          Length = 107891

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 1244  tgcagtcccagctccactacaaaggctga 1272
             |||||||||||| ||| ||||||||||||
Sbjct: 80571 tgcagtcccagccccagtacaaaggctga 80599



to top

>emb|AL080286.16|HSDJ655C4 Human DNA sequence from clone RP4-655C4 on chromosome 1p32.3-34.3
              Contains a ferritin light polypeptide (FTL) pseudogene,
              complete sequence
          Length = 155278

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 23     ctctcccacactccccactcc 43
              |||||||||||||||||||||
Sbjct: 112694 ctctcccacactccccactcc 112674



to top

>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 659    cggtggcgctgctgctcatgg 679
              |||||||||||||||||||||
Sbjct: 149341 cggtggcgctgctgctcatgg 149321



to top

>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 659    cggtggcgctgctgctcatgg 679
              |||||||||||||||||||||
Sbjct: 102022 cggtggcgctgctgctcatgg 102002



to top

>gb|AC012161.8|AC012161 Drosophila melanogaster, chromosome X, region 16B-16D, BAC clone
             BACR01I22, complete sequence
          Length = 173281

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 612   cggcgccatgatcccgctgct 632
             |||||||||||||||||||||
Sbjct: 10946 cggcgccatgatcccgctgct 10966



to top

>gb|AC011703.8|AC011703 Drosophila melanogaster, chromosome X, region 16A-16B, BAC clone
             BACR35P18, complete sequence
          Length = 163307

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 612   cggcgccatgatcccgctgct 632
             |||||||||||||||||||||
Sbjct: 47280 cggcgccatgatcccgctgct 47300



to top

>gb|AC011702.10|AC011702 Drosophila melanogaster, chromosome X, region 15F-16A, BAC clone
             BACR42I14, complete sequence
          Length = 167688

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 612   cggcgccatgatcccgctgct 632
             |||||||||||||||||||||
Sbjct: 60927 cggcgccatgatcccgctgct 60947



to top

>gb|AC175464.1| Mus musculus BAC clone RP23-129E4 from chromosome 16, complete sequence
          Length = 224605

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    gtgctttcttcttcctcttcc 236
              |||||||||||||||||||||
Sbjct: 213109 gtgctttcttcttcctcttcc 213089



to top

>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0135D07
          Length = 170587

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 355    ggagggaaaggtggtggcggg 375
              |||||||||||||||||||||
Sbjct: 151096 ggagggaaaggtggtggcggg 151076



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 721     gagcaggtcaagaccggcaag 741
               |||||||||||||||||||||
Sbjct: 6330451 gagcaggtcaagaccggcaag 6330471



to top

>gb|AY075322.1| Drosophila melanogaster GH08937 full insert cDNA
          Length = 934

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 612 cggcgccatgatcccgctgct 632
           |||||||||||||||||||||
Sbjct: 288 cggcgccatgatcccgctgct 308



to top

>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0005A04
          Length = 140723

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 355   ggagggaaaggtggtggcggg 375
             |||||||||||||||||||||
Sbjct: 57293 ggagggaaaggtggtggcggg 57273



to top

>gb|AC175032.1| Mus musculus BAC clone RP24-222L21 from chromosome 14, complete
            sequence
          Length = 204872

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 344  ggacagccaggggagggaaag 364
            |||||||||||||||||||||
Sbjct: 1607 ggacagccaggggagggaaag 1587



to top

>emb|AJ309806.1|TMO309806 Triticum monococcum 5S rRNA gene, clone Tmone20
          Length = 367

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1249 tcccagctccactacaaaggc 1269
            |||||||||||||||||||||
Sbjct: 87   tcccagctccactacaaaggc 67



to top

>ref|XM_843002.1| Leishmania major strain Friedlin protein kinase (LMJ_0398) partial
            mRNA
          Length = 4557

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 793  tccagcatcgccgccatcgtc 813
            |||||||||||||||||||||
Sbjct: 2808 tccagcatcgccgccatcgtc 2788



to top

>emb|AL805897.13| Mouse DNA sequence from clone RP23-63D8 on chromosome 4, complete
            sequence
          Length = 231989

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1425 aaaagtcagggatggtgagat 1445
            |||||||||||||||||||||
Sbjct: 3471 aaaagtcagggatggtgagat 3491



to top

>gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome 14, complete sequence
          Length = 171474

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 344   ggacagccaggggagggaaag 364
             |||||||||||||||||||||
Sbjct: 51258 ggacagccaggggagggaaag 51238


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 251,627,532
Number of extensions: 14878545
Number of successful extensions: 498339
Number of sequences better than 10.0: 69
Number of HSP's gapped: 498325
Number of HSP's successfully gapped: 83
Length of query: 1530
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1507
Effective length of database: 18,503,978,556
Effective search space: 27885495683892
Effective search space used: 27885495683892
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top