ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5j01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF542974.1| Triticum aestivum Emr1 mRNA, complete cds Length = 1564 Score = 1818 bits (917), Expect = 0.0 Identities = 1042/1085 (96%), Gaps = 9/1085 (0%) Strand = Plus / Plus Query: 945 agtggttaggcatgggcaaccaagaacttcttgaatatttcagtgattatgctgcgacca 1004 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 298 agtggttaggcatgggcaaccaagaacttcttgagtatttcagtgattatgctgcgacca 357 Query: 1005 aagcacgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaa 1064 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 aagcacgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaa 417 Query: 1065 gctctgctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaa 1124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gctctgctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaa 477 Query: 1125 cagacagggacacttggcagaatcgcagggttcctttcttacctggagggaagagacaat 1184 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 cagacagggacacttggcagaatcgcagggttcctttcttacctggtgggaagagacaat 537 Query: 1185 tatatggtttcctagccagaaaggaagacatggagactttcaatagacactgccaaggga 1244 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 tatacggtttcctagccagaaaggaagacatggagactttcaatagacactgccaaggga 597 Query: 1245 aaagccgcctgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagc 1304 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 598 aaagccgcctgaaatacgagatgagatctcataatgagatggtagtggcccagatgaagc 657 Query: 1305 aaatgagcgaagataatcaacaactcaattatctgaagaacaaggtggttaagacagagc 1364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 aaatgagcgaagataatcaacaactcaattatctgaagaacaaggtggttaagacagagc 717 Query: 1365 agcgctctaaagttgtagaagaaaccctgggtgttattacccagaaacttcgagagacta 1424 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 718 agcgctctaaagttgtagaagaaaccctgggtgttattacgcagaaacttcgagagacta 777 Query: 1425 tggaagagaatatattcgtcaggagtaaagctaaagagaagcactctgagtatgaggaag 1484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 tggaagagaatatattcgtcaggagtaaagctaaagagaagcactctgagtatgaggaag 837 Query: 1485 agatgaaatcccaggaaaagttcttccatgatcagattgagaacattcacaaggccacag 1544 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 838 agatgaaatcccaggaaaaattcttccatgatcagatagagaacattcacaaggccacag 897 Query: 1545 aagacaaggaaagcgagtttgagaggttgctgcaggaggagcgtgcgaaggctagacagt 1604 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 898 aagacaaggaaagcgagtttgagagattgctgcaggaggagcgtgcaaaggctagacagt 957 Query: 1605 gtgatgtggattctgggactactgaaaatcgtagcctaaggaaggaacaggtacagcggt 1664 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 958 gtgatgtggattctgggactactgaaaatcgcaggctaaggaaggaacaggtacagcggt 1017 Query: 1665 tcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaataa 1724 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| Sbjct: 1018 tcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagggacgaaatgataa 1077 Query: 1725 aagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtggagc 1784 ||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 1078 aagcgcacgaggagaagaaggtgcagctgaagaaagagtacatggcaaaggaggtggagc 1137 Query: 1785 tcgagaaggagtttgaggccgctctcaccggtctgatggagaaacataggccaggcacct 1844 |||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 1138 tcgagaaggagtttgatgctgctctcaccggtttgatggagaaacataggccaggcacct 1197 Query: 1845 tccaggcctccagctccagctcgtgaagattcgcagctcagagcaatatctgagatttgc 1904 |||||||||||||||||||| ||||||||||| || || ||||||||||||| Sbjct: 1198 tccaggcctccagctccagcccgtgaagattcacaact---------atctgagatttgc 1248 Query: 1905 cttctgcataatgacatctaaggatgcaagaccatatgcggtgtatgattaggaatcctg 1964 ||||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||| Sbjct: 1249 cttctgcataacgacatctaaagatgcaagaccatatgtggtgcatgattaggaatcctg 1308 Query: 1965 aacttgattgtacttgtattggtggttatatggccatgattaggaaacctgaacctgtct 2024 |||||||||| || ||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 1309 aacttgattgaacctgtatgggtggttatatggccatgattaggaaacctgaacttgtct 1368 Query: 2025 tagtg 2029 |||| Sbjct: 1369 gagtg 1373 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 2035 tctaatgactgcctgggcagcaagcgtcgaat 2066 ||||||||||||||||| |||||||||||||| Sbjct: 1405 tctaatgactgcctggggagcaagcgtcgaat 1436
>gb|AF469493.1| Triticum aestivum HOTR mRNA, partial cds Length = 513 Score = 963 bits (486), Expect = 0.0 Identities = 504/510 (98%) Strand = Plus / Plus Query: 947 tggttaggcatgggcaaccaagaacttcttgaatatttcagtgattatgctgcgaccaaa 1006 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 tggttaggcatgggcaaccaagaacttcttgagtatttcagtgattatgctgcgaccaaa 60 Query: 1007 gcacgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaagc 1066 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcacgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaagc 120 Query: 1067 tctgctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaaca 1126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctgctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaaca 180 Query: 1127 gacagggacacttggcagaatcgcagggttcctttcttacctggagggaagagacaatta 1186 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 181 gacagggacacttggcagaatcgcagggttcctttcttacctggtgggaagagacaatta 240 Query: 1187 tatggtttcctagccagaaaggaagacatggagactttcaatagacactgccaagggaaa 1246 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tacggtttcctagccagaaaggaagacatggagactttcaatagacactgccaagggaaa 300 Query: 1247 agccgcctgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaa 1306 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 301 agccgcctgaaatacgagatgagatctcataatgagatggtagtggcccagatgaagcaa 360 Query: 1307 atgagcgaagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcag 1366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atgagcgaagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcag 420 Query: 1367 cgctctaaagttgtagaagaaaccctgggtgttattacccagaaacttcgagagactatg 1426 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 cgctctaaagttgtagaagaaaccctgggtgttattacgcagaaacttcgagagactatg 480 Query: 1427 gaagagaatatattcgtcaggagtaaagct 1456 |||||||||||||||||||||||||||||| Sbjct: 481 gaagagaatatattcgtcaggagtaaagct 510
>ref|NM_001072892.1| Oryza sativa (japonica cultivar-group) Os12g0197500 (Os12g0197500) mRNA, complete cds Length = 2177 Score = 666 bits (336), Expect = 0.0 Identities = 949/1150 (82%), Gaps = 5/1150 (0%) Strand = Plus / Plus Query: 650 actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 709 ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| |||| Sbjct: 678 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 737 Query: 710 gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 769 ||||| ||| ||||| |||| ||||| | |||||||||||||| | ||| |||| ||| Sbjct: 738 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 797 Query: 770 agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 829 || ||||||||| || | ||||| ||| | |||||||||||| |||| || |||||| Sbjct: 798 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 857 Query: 830 tctggtgagcaatttgggaaatggaaaggattgcgagaaagcactgaccgggagattgta 889 ||||| || |||||| ||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 858 tctggcgaacaatttaggaaatggaaaggattgcgggaaagcactgatcgtgagattgtt 917 Query: 890 tggccaccaatggtcatcgtgatgaacaccctacttgaaaaagatgaagatgataagtgg 949 |||||||||||||| | || |||||||| || | ||| ||||||| |||||||||||| Sbjct: 918 tggccaccaatggtggttgttatgaacactgtattggaacaagatgaggatgataagtgg 977 Query: 950 ttaggcatgggcaaccaagaacttcttgaatatttcagtgattatgctgcgaccaaagca 1009 ||| ||||| |||||||| || |||| ||||||||||| |||||||| | ||||||| Sbjct: 978 aaaggtatggggaaccaagagctaattgattatttcagtgaatatgctgcaagcaaagca 1037 Query: 1010 cgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaagctct 1069 |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||| Sbjct: 1038 cgccatgcctatggtccaaatgggcaccgtggcatgagtgtgctaatctttgacagctcg 1097 Query: 1070 gctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaacagac 1129 ||||||||||||||||| ||||||||| | ||| | || ||| || ||||||||||||| Sbjct: 1098 gctgtgggctatatggaagcagaacgtttgcatgatcactttgttcgtcaaagaacagac 1157 Query: 1130 agggacacttggcaga---atcgcagggttcctttcttacctggagggaagagacaatta 1186 ||| | || ||| | | || || |||| | ||||||||||| ||||| || || | Sbjct: 1158 aggaatacatggaacagtgctcacaaggttacattcttacctggtgggaaaaggcagctg 1217 Query: 1187 tatggtttcctagccagaaaggaagacatggagactttcaatagacactgccaagggaaa 1246 ||||||||| |||| | ||| || ||||||||||| ||||||||||| ||||| || ||| Sbjct: 1218 tatggtttcttagctacaaaagatgacatggagacattcaatagacattgccacggaaaa 1277 Query: 1247 agccgcctgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaa 1306 ||| |||||||||||||||||||| ||||||||||||| || ||||||||||||| Sbjct: 1278 tcccgtttgaaatatgagatgagatcttataatgagatggtggttacccaaatgaagcag 1337 Query: 1307 atgagcgaagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcag 1366 ||||||||||| || || ||||| ||||| ||||||||||| ||||||||| ||||||| Sbjct: 1338 atgagcgaagacaaccagcaactgaattacctgaagaacaaaatggttaagaaagagcag 1397 Query: 1367 cgctctaaagttgtagaagaaaccctgggtgttattacccagaaacttcgagagactatg 1426 | ||||||| | ||||| || || || ||||| |||||||||||||| | ||||| ||| Sbjct: 1398 cactctaaattagtagaggatacattgagtgttgttacccagaaacttagggagacaatg 1457 Query: 1427 gaagagaata-tattcgtcaggagtaaagctaaagagaagcactctgagtatgaggaaga 1485 |||||||||| |||| || | | |||||| ||||| ||||||| ||||||||| |||| Sbjct: 1458 gaagagaatactatt-gtacgaaataaagccaaagaaaagcacttggagtatgagaaaga 1516 Query: 1486 gatgaaatcccaggaaaagttcttccatgatcagattgagaacattcacaaggccacaga 1545 |||||| | |||||| | || ||||||||||| || || || ||||||||||||||||| Sbjct: 1517 gatgaagtaccaggaggaatttttccatgatcaaatcgaaaaaattcacaaggccacaga 1576 Query: 1546 agacaaggaaagcgagtttgagaggttgctgcaggaggagcgtgcgaaggctagacagtg 1605 || || |||| | ||||||||| ||||||||| |||||||| || ||||||||||| | Sbjct: 1577 ggagaaagaaatcaagtttgagaagttgctgcaagaggagcgagcaaaggctagacaaag 1636 Query: 1606 tgatgtggattctgggactactgaaaatcgtagcctaaggaaggaacaggtacagcggtt 1665 |||||| || ||||| | ||||||| |||| || | |||||||||| || | ||| || Sbjct: 1637 tgatgttgactctggaagtactgaagatcgcaggcaaaggaaggaaaagattcagaactt 1696 Query: 1666 catagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaataaa 1725 |||||| |||||||| ||||| || |||| ||||| || ||| ||||| || | || || Sbjct: 1697 catagactgccaggtgaaggatgttgaggaatttgaagccgaacgagacaaactgatcaa 1756 Query: 1726 agggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtggagct 1785 | |||||| |||||||||||| |||||||||| |||||| || | ||||| | ||||| Sbjct: 1757 attgcatgaagagaagaaggtgaagctcaagaaggagtacctggcgaaggaatttgagct 1816 Query: 1786 cgagaaggag 1795 ||||||||| Sbjct: 1817 tgagaaggag 1826 Score = 77.8 bits (39), Expect = 1e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 367 agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 426 |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| |||| Sbjct: 383 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 442 Query: 427 tcctgaaagca 437 | ||||||||| Sbjct: 443 tactgaaagca 453 Score = 56.0 bits (28), Expect = 5e-04 Identities = 66/78 (84%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 66 ccggcgatcgacgcggcggcggg---cctcccggcaacggcgacaaccccgggggtggct 122 |||||||||| |||||||||||| ||||||||| ||||||| || |||||||||| | Sbjct: 85 ccggcgatcgccgcggcggcggggggcctcccggctccggcgacgactccgggggtggtt 144 Query: 123 gggaaactattgaaaaga 140 |||| ||| |||| |||| Sbjct: 145 gggagactgttgagaaga 162
>dbj|AK064217.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-F07, full insert sequence Length = 1556 Score = 529 bits (267), Expect = e-146 Identities = 724/873 (82%), Gaps = 5/873 (0%) Strand = Plus / Plus Query: 650 actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 709 ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| |||| Sbjct: 680 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 739 Query: 710 gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 769 ||||| ||| ||||| |||| ||||| | |||||||||||||| | ||| |||| ||| Sbjct: 740 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 799 Query: 770 agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 829 || ||||||||| || | ||||| ||| | |||||||||||| |||| || |||||| Sbjct: 800 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 859 Query: 830 tctggtgagcaatttgggaaatggaaaggattgcgagaaagcactgaccgggagattgta 889 ||||| | |||||| ||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 860 tctggcggacaatttaggaaatggaaaggattgcgggaaagcactgatcgtgagattgtt 919 Query: 890 tggccaccaatggtcatcgtgatgaacaccctacttgaaaaagatgaagatgataagtgg 949 |||||||||||||| | || |||||||| || | ||| ||||||| |||||||||||| Sbjct: 920 tggccaccaatggtggttgttatgaacactgtattggaacaagatgaggatgataagtgg 979 Query: 950 ttaggcatgggcaaccaagaacttcttgaatatttcagtgattatgctgcgaccaaagca 1009 ||| ||||| |||||||| || |||| ||||||||||| |||||||| | ||||||| Sbjct: 980 aaaggtatggggaaccaagagctaattgattatttcagtgaatatgctgcaagcaaagca 1039 Query: 1010 cgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaagctct 1069 |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||| Sbjct: 1040 cgccatgcctatggtccaaatgggcaccgtggcatgagtgtgctaatctttgacagctcg 1099 Query: 1070 gctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaacagac 1129 ||||||||||||||||| ||||||||| | ||| | || ||| || ||||||||||||| Sbjct: 1100 gctgtgggctatatggaagcagaacgtttgcatgatcactttgttcgtcaaagaacagac 1159 Query: 1130 agggacacttggcaga---atcgcagggttcctttcttacctggagggaagagacaatta 1186 ||| | || ||| | | || || |||| | |||||||| || ||||| || || | Sbjct: 1160 aggaatacatggaacagtgctcacaaggttacattcttacccggtgggaaaaggcagctg 1219 Query: 1187 tatggtttcctagccagaaaggaagacatggagactttcaatagacactgccaagggaaa 1246 ||||||||| |||| | ||| || ||||||||||| ||||||||||| ||||| || ||| Sbjct: 1220 tatggtttcttagctacaaaagatgacatggagacattcaatagacattgccacggaaaa 1279 Query: 1247 agccgcctgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaa 1306 ||| |||||||||||||||||||| ||||||||||||| || ||||||||||||| Sbjct: 1280 tcccgtttgaaatatgagatgagatcttataatgagatggtggttacccaaatgaagcag 1339 Query: 1307 atgagcgaagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcag 1366 ||||||||||| || || ||||| ||||| ||||||||||| ||||||||| ||||||| Sbjct: 1340 atgagcgaagacaaccagcaactgaattacctgaagaacaaaatggttaagaaagagcag 1399 Query: 1367 cgctctaaagttgtagaagaaaccctgggtgttattacccagaaacttcgagagactatg 1426 | ||||||| | ||||| || || || ||||| |||||||||||||| | ||||| ||| Sbjct: 1400 cactctaaattagtagaggatacattgagtgttgttacccagaaacttagggagacaatg 1459 Query: 1427 gaagagaata-tattcgtcaggagtaaagctaaagagaagcactctgagtatgaggaaga 1485 |||||||||| |||| || | | |||||| ||||| ||||||| ||||||||| |||| Sbjct: 1460 gaagagaatactatt-gtacgaaataaagccaaagaaaagcacttggagtatgagaaaga 1518 Query: 1486 gatgaaatcccaggaaaagttcttccatgatca 1518 |||||| | |||||| | || ||||||||||| Sbjct: 1519 gatgaagtaccaggaggaatttttccatgatca 1551 Score = 77.8 bits (39), Expect = 1e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 367 agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 426 |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| |||| Sbjct: 385 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 444 Query: 427 tcctgaaagca 437 | ||||||||| Sbjct: 445 tactgaaagca 455 Score = 56.0 bits (28), Expect = 5e-04 Identities = 66/78 (84%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 66 ccggcgatcgacgcggcggcggg---cctcccggcaacggcgacaaccccgggggtggct 122 |||||||||| |||||||||||| ||||||||| ||||||| || |||||||||| | Sbjct: 87 ccggcgatcgccgcggcggcggggggcctcccggctccggcgacgactccgggggtggtt 146 Query: 123 gggaaactattgaaaaga 140 |||| ||| |||| |||| Sbjct: 147 gggagactgttgagaaga 164
>dbj|AK061975.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A02, full insert sequence Length = 1214 Score = 476 bits (240), Expect = e-130 Identities = 715/870 (82%), Gaps = 5/870 (0%) Strand = Plus / Plus Query: 930 aagatgaagatgataagtggttaggcatgggcaaccaagaacttcttgaatatttcagtg 989 ||||||| |||||||||||| ||| ||||| |||||||| || |||| |||||||||| Sbjct: 15 aagatgaggatgataagtggaaaggtatggggaaccaagagctaattgattatttcagtg 74 Query: 990 attatgctgcgaccaaagcacgccatgcatatggtccaggtgggcaccgtggcatgagtg 1049 | |||||||| | ||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 75 aatatgctgcaagcaaagcacgccatgcctatggtccaaatgggcaccgtggcatgagtg 134 Query: 1050 tgctaatatttgaaagctctgctgtgggctatatggaggcagaacgtcttcataagcatt 1109 ||||||| ||||| ||||| ||||||||||||||||| ||||||||| | ||| | || | Sbjct: 135 tgctaatctttgacagctcggctgtgggctatatggaagcagaacgtttgcatgatcact 194 Query: 1110 ttattgatcaaagaacagacagggacacttggcagaat---cgcagggttcctttcttac 1166 || || |||||||||||||||| | || ||| | | | | || |||| | ||||||| Sbjct: 195 ttgttcgtcaaagaacagacaggaatacatggaacagtgctcacaaggttacattcttac 254 Query: 1167 ctggagggaagagacaattatatggtttcctagccagaaaggaagacatggagactttca 1226 |||| ||||| || || | ||||||||| |||| | ||| || ||||||||||| |||| Sbjct: 255 ctggtgggaaaaggcagctgtatggtttcttagctacaaaagatgacatggagacattca 314 Query: 1227 atagacactgccaagggaaaagccgcctgaaatatgagatgagatctcataatgagatgg 1286 ||||||| ||||| || ||| ||| |||||||||||||||||||| |||||||||||| Sbjct: 315 atagacattgccacggaaaatcccgtttgaaatatgagatgagatcttataatgagatgg 374 Query: 1287 tagtggcccaaatgaagcaaatgagcgaagataatcaacaactcaattatctgaagaaca 1346 | || ||||||||||||| ||||||||||| || || ||||| ||||| |||||||||| Sbjct: 375 tggttacccaaatgaagcagatgagcgaagacaaccagcaactgaattacctgaagaaca 434 Query: 1347 aggtggttaagacagagcagcgctctaaagttgtagaagaaaccctgggtgttattaccc 1406 | ||||||||| |||||||| ||||||| | ||||| || || || ||||| |||||| Sbjct: 435 aaatggttaagaaagagcagcactctaaattagtagaggatacattgagtgttgttaccc 494 Query: 1407 agaaacttcgagagactatggaagagaata-tattcgtcaggagtaaagctaaagagaag 1465 |||||||| | ||||| ||||||||||||| |||| || | | |||||| ||||| ||| Sbjct: 495 agaaacttagggagacaatggaagagaatactatt-gtacgaaataaagccaaagaaaag 553 Query: 1466 cactctgagtatgaggaagagatgaaatcccaggaaaagttcttccatgatcagattgag 1525 |||| ||||||||| |||||||||| | |||||| | || ||||||||||| || || Sbjct: 554 cacttggagtatgagaaagagatgaagtaccaggaggaatttttccatgatcaaatcgaa 613 Query: 1526 aacattcacaaggccacagaagacaaggaaagcgagtttgagaggttgctgcaggaggag 1585 || ||||||||||||||||| || || |||| | ||||||||| ||||||||| |||||| Sbjct: 614 aaaattcacaaggccacagaggagaaagaaatcaagtttgagaagttgctgcaagaggag 673 Query: 1586 cgtgcgaaggctagacagtgtgatgtggattctgggactactgaaaatcgtagcctaagg 1645 || || ||||||||||| ||||||| || ||||| | ||||||| |||| || | |||| Sbjct: 674 cgagcaaaggctagacaaagtgatgttgactctggaagtactgaagatcgcaggcaaagg 733 Query: 1646 aaggaacaggtacagcggttcatagagtgccaggttaaggacgtgcaggagtttgaggct 1705 |||||| || | ||| |||||||| |||||||| ||||| || |||| ||||| || Sbjct: 734 aaggaaaagattcagaacttcatagactgccaggtgaaggatgttgaggaatttgaagcc 793 Query: 1706 gaaagagacgaattaataaaagggcatgaggagaagaaggtgcagctcaagaaagagtac 1765 ||| ||||| || | || ||| |||||| |||||||||||| |||||||||| |||||| Sbjct: 794 gaacgagacaaactgatcaaattgcatgaagagaagaaggtgaagctcaagaaggagtac 853 Query: 1766 atgacaaaggaggtggagctcgagaaggag 1795 || | ||||| | ||||| ||||||||| Sbjct: 854 ctggcgaaggaatttgagcttgagaaggag 883
>dbj|AK064995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D20, full insert sequence Length = 2181 Score = 379 bits (191), Expect = e-101 Identities = 410/483 (84%) Strand = Plus / Plus Query: 650 actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 709 ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| |||| Sbjct: 680 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 739 Query: 710 gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 769 ||||| ||| ||||| |||| ||||| | |||||||||||||| | ||| |||| ||| Sbjct: 740 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 799 Query: 770 agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 829 || ||||||||| || | ||||| ||| | |||||||||||| |||| || |||||| Sbjct: 800 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 859 Query: 830 tctggtgagcaatttgggaaatggaaaggattgcgagaaagcactgaccgggagattgta 889 ||||| || |||||| ||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 860 tctggcgaacaatttaggaaatggaaaggattgcgggaaagcactgatcgtgagattgtt 919 Query: 890 tggccaccaatggtcatcgtgatgaacaccctacttgaaaaagatgaagatgataagtgg 949 |||||||||||||| | || |||||||| || | ||| ||||||| |||||||||||| Sbjct: 920 tggccaccaatggtggttgttatgaacactgtattggaacaagatgaggatgataagtgg 979 Query: 950 ttaggcatgggcaaccaagaacttcttgaatatttcagtgattatgctgcgaccaaagca 1009 ||| ||||| |||||||| || |||| ||||||||||| |||||||| | ||||||| Sbjct: 980 aaaggtatggggaaccaagagctaattgattatttcagtgaatatgctgcaagcaaagca 1039 Query: 1010 cgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaagctct 1069 |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||| Sbjct: 1040 cgccatgcctatggtccaaatgggcaccgtggcatgagtgtgctaatctttgacagctcg 1099 Query: 1070 gctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaacagac 1129 ||||||||||||||||| ||||||||| | ||| | || ||| || ||||||||||||| Sbjct: 1100 gctgtgggctatatggaagcagaacgtttgcatgatcactttgttcgtcaaagaacagac 1159 Query: 1130 agg 1132 ||| Sbjct: 1160 agg 1162 Score = 321 bits (162), Expect = 6e-84 Identities = 522/638 (81%), Gaps = 3/638 (0%) Strand = Plus / Plus Query: 1160 ttcttacctggagggaagagacaattatatggtttcctagccagaaaggaagacatggag 1219 ||||||||||| ||||| || || | ||||||||| |||| | ||| || ||||||||| Sbjct: 1194 ttcttacctggtgggaaaaggcagctgtatggtttcttagctacaaaagatgacatggag 1253 Query: 1220 actttcaatagacactgccaagggaaaagccgcctgaaatatgagatgagatctcataat 1279 || ||||||||||| ||||| || ||| ||| |||||||||||||||||||| ||||| Sbjct: 1254 acattcaatagacattgccacggaaaatcccgtttgaaatatgagatgagatcttataat 1313 Query: 1280 gagatggtagtggcccaaatgaagcaaatgagcgaagataatcaacaactcaattatctg 1339 |||||||| || ||||||||||||| ||||||||||| || || ||||| ||||| ||| Sbjct: 1314 gagatggtggttacccaaatgaagcagatgagcgaagacaaccagcaactgaattacctg 1373 Query: 1340 aagaacaaggtggttaagacagagcagcgctctaaagttgtagaagaaaccctgggtgtt 1399 |||||||| ||||||||| |||||||| ||||||| | ||||| || || || ||||| Sbjct: 1374 aagaacaaaatggttaagaaagagcagcactctaaattagtagaggatacattgagtgtt 1433 Query: 1400 attacccagaaacttcgagagactatggaagagaata-tattcgtcaggagtaaagctaa 1458 |||||||||||||| | ||||| ||||||||||||| |||| || | | |||||| || Sbjct: 1434 gttacccagaaacttagggagacaatggaagagaatactatt-gtacgaaataaagccaa 1492 Query: 1459 agagaagcactctgagtatgaggaagagatgaaatcccaggaaaagttcttccatgatca 1518 ||| ||||||| ||||||||| |||||||||| | |||||| | || ||||||||||| Sbjct: 1493 agaaaagcacttggagtatgagaaagagatgaagtaccaggaggaatttttccatgatca 1552 Query: 1519 gattg-agaacattcacaaggccacagaagacaaggaaagcgagtttgagaggttgctgc 1577 || | | || ||||||||||||||||| || || |||| | ||||||||| |||||||| Sbjct: 1553 aatcgaaaaaaattcacaaggccacagaggagaaagaaatcaagtttgagaagttgctgc 1612 Query: 1578 aggaggagcgtgcgaaggctagacagtgtgatgtggattctgggactactgaaaatcgta 1637 | |||||||| || ||||||||||| ||||||| || ||||| | ||||||| |||| | Sbjct: 1613 aagaggagcgagcaaaggctagacaaagtgatgttgactctggaagtactgaagatcgca 1672 Query: 1638 gcctaaggaaggaacaggtacagcggttcatagagtgccaggttaaggacgtgcaggagt 1697 | | |||||||||| || | ||| |||||||| |||||||| ||||| || |||| | Sbjct: 1673 ggcaaaggaaggaaaagattcagaacttcatagactgccaggtgaaggatgttgaggaat 1732 Query: 1698 ttgaggctgaaagagacgaattaataaaagggcatgaggagaagaaggtgcagctcaaga 1757 |||| || ||| ||||| || | || ||| |||||| |||||||||||| ||||||||| Sbjct: 1733 ttgaagccgaacgagacaaactgatcaaattgcatgaagagaagaaggtgaagctcaaga 1792 Query: 1758 aagagtacatgacaaaggaggtggagctcgagaaggag 1795 | |||||| || | ||||| | ||||| ||||||||| Sbjct: 1793 aggagtacctggcgaaggaatttgagcttgagaaggag 1830 Score = 77.8 bits (39), Expect = 1e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 367 agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 426 |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| |||| Sbjct: 385 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 444 Query: 427 tcctgaaagca 437 | ||||||||| Sbjct: 445 tactgaaagca 455 Score = 56.0 bits (28), Expect = 5e-04 Identities = 66/78 (84%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 66 ccggcgatcgacgcggcggcggg---cctcccggcaacggcgacaaccccgggggtggct 122 |||||||||| |||||||||||| ||||||||| ||||||| || |||||||||| | Sbjct: 87 ccggcgatcgccgcggcggcggggggcctcccggctccggcgacgactccgggggtggtt 146 Query: 123 gggaaactattgaaaaga 140 |||| ||| |||| |||| Sbjct: 147 gggagactgttgagaaga 164
>gb|AY105405.1| Zea mays PCO125857 mRNA sequence Length = 1108 Score = 276 bits (139), Expect = 3e-70 Identities = 507/627 (80%), Gaps = 2/627 (0%) Strand = Plus / Plus Query: 1235 tgccaagggaaaagccgcctgaaatatgagatgagatctcataatgagatggtagtggcc 1294 ||||| || |||||||| ||||| ||||||||||| ||| | ||||||||||| ||| Sbjct: 125 tgccatggtaaaagccgtctgaagtatgagatgaggtcttacaatgagatggtggtgatt 184 Query: 1295 caaatgaagcaaatgagcgaagataatcaacaactcaattatctgaagaacaaggtggtt 1354 |||||||| || ||||| ||||| || |||||||| ||||| |||||||||||| ||||| Sbjct: 185 caaatgaaacagatgagtgaagacaaccaacaactgaattacctgaagaacaagatggtt 244 Query: 1355 aagacagagcagcgctctaaagttgtagaagaaaccctgggtgttattacccagaaactt 1414 |||||||||||||| ||||||| ||||||||| | |||||||| |||||||||| || Sbjct: 245 aagacagagcagcgatctaaagcagtagaagaatcattgggtgttgttacccagaagcta 304 Query: 1415 cgagagactatggaagagaatatattcgtcaggagtaaagctaaagagaagcactctgag 1474 || |||||||| ||||| |||||||| || ||||||||||| |||||||||||| ||| Sbjct: 305 cgtgagactattgaagaaaatatatttgttaggagtaaagcaaaagagaagcacatggag 364 Query: 1475 tatgaggaagagatgaaatcccaggaaaagttcttccatgatcagattgagaacattcac 1534 || |||||||||||||| |||||||| | | || |||| || |||||| | |||||| Sbjct: 365 tacgaggaagagatgaagtcccaggaggaaatttttcatggtctaattgaggatattcac 424 Query: 1535 aaggccacagaagacaaggaaagcgagtttgagaggttgctgcaggaggagcgtgcgaag 1594 ||||||||||| || || |||| ||||||||| |||| ||||||| ||||| | ||| Sbjct: 425 aaggccacagaggataaagaaaagcagtttgagaagttgttgcaggaagagcgctcaaag 484 Query: 1595 gctagacagtgtgatgtggattctgggactactgaaa-atcgtagcctaaggaaggaaca 1653 || |||| | |||||| |||||||| |||| ||||| ||||| |||||||||||| | Sbjct: 485 gccagacgctttgatgttgattctggaacta-tgaaagatcgtcagctaaggaaggaata 543 Query: 1654 ggtacagcggttcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagaga 1713 || ||| |||||| || ||||| || ||||| ||| |||||||| | ||| |||| Sbjct: 544 tgtgcagaagttcattgattgccaagtcaaggatgtggcagagtttgaagttgagcgaga 603 Query: 1714 cgaattaataaaagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaa 1773 || | || |||| || ||||| |||||| || ||||||||||||| |||||| Sbjct: 604 tgagctgatcaaagtccacgaggacaagaagttgaagctcaagaaagaatacatggatct 663 Query: 1774 ggaggtggagctcgagaaggagtttgaggccgctctcaccggtctgatggagaaacatag 1833 |||| ||||||| |||||||||||||| || || || || || ||||||||||| |||| Sbjct: 664 ggagctggagctggagaaggagtttgacgcagccctgacgggcctgatggagaagcataa 723 Query: 1834 gccaggcaccttccaggcctccagctc 1860 ||||| |||||| ||||||||||||| Sbjct: 724 gccagataccttcgaggcctccagctc 750
>gb|BT017214.1| Zea mays clone EL01N0372C04.c mRNA sequence Length = 990 Score = 274 bits (138), Expect = 1e-69 Identities = 500/618 (80%), Gaps = 2/618 (0%) Strand = Plus / Plus Query: 1244 aaaagccgcctgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaag 1303 |||||||| ||||| ||||||||||| ||| | ||||||||||| ||| |||||||| Sbjct: 15 aaaagccgtctgaagtatgagatgaggtcttacaatgagatggtggtgattcaaatgaaa 74 Query: 1304 caaatgagcgaagataatcaacaactcaattatctgaagaacaaggtggttaagacagag 1363 || ||||| ||||| || |||||||| ||||| |||||||||||| |||||||||||||| Sbjct: 75 cagatgagtgaagacaaccaacaactgaattacctgaagaacaagatggttaagacagag 134 Query: 1364 cagcgctctaaagttgtagaagaaaccctgggtgttattacccagaaacttcgagagact 1423 ||||| ||||||| ||||||||| | |||||||| |||||||||| || || |||||| Sbjct: 135 cagcgatctaaagcagtagaagaatcattgggtgttgttacccagaagctacgtgagact 194 Query: 1424 atggaagagaatatattcgtcaggagtaaagctaaagagaagcactctgagtatgaggaa 1483 || ||||| |||||||| || ||||||||||| |||||||||||| ||||| |||||| Sbjct: 195 attgaagaaaatatatttgttaggagtaaagcaaaagagaagcacatggagtacgaggaa 254 Query: 1484 gagatgaaatcccaggaaaagttcttccatgatcagattgagaacattcacaaggccaca 1543 |||||||| |||||||| | | || |||| || |||||| | ||||||||||||||| Sbjct: 255 gagatgaagtcccaggaggaaatttttcatggtctaattgaggatattcacaaggccaca 314 Query: 1544 gaagacaaggaaagcgagtttgagaggttgctgcaggaggagcgtgcgaaggctagacag 1603 || || || |||| ||||||||| |||| ||||||| ||||| | ||||| |||| Sbjct: 315 gaggataaagaaaagcagtttgagaagttgttgcaggaagagcgctcaaaggccagacgc 374 Query: 1604 tgtgatgtggattctgggactactgaaa-atcgtagcctaaggaaggaacaggtacagcg 1662 | |||||| |||||||| |||| ||||| ||||| |||||||||||| | || ||| Sbjct: 375 tttgatgttgattctggaacta-tgaaagatcgtcagctaaggaaggaatatgtgcagaa 433 Query: 1663 gttcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaat 1722 |||||| || ||||| || ||||| ||| |||||||| | ||| |||| || | || Sbjct: 434 gttcattgattgccaagtcaaggatgtggcagagtttgaagttgagcgagatgagctgat 493 Query: 1723 aaaagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtgga 1782 |||| || ||||| |||||| || ||||||||||||| |||||| |||| |||| Sbjct: 494 caaagtccacgaggacaagaagttgaagctcaagaaagaatacatggatctggagctgga 553 Query: 1783 gctcgagaaggagtttgaggccgctctcaccggtctgatggagaaacataggccaggcac 1842 ||| |||||||||||||| || || || || || ||||||||||| |||| ||||| || Sbjct: 554 gctggagaaggagtttgacgcagccctgacgggcctgatggagaagcataagccagatac 613 Query: 1843 cttccaggcctccagctc 1860 |||| ||||||||||||| Sbjct: 614 cttcgaggcctccagctc 631
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 216 bits (109), Expect = 2e-52 Identities = 250/297 (84%) Strand = Plus / Minus Query: 650 actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 709 ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| |||| Sbjct: 5037940 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 5037881 Query: 710 gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 769 ||||| ||| ||||| |||| ||||| | |||||||||||||| | ||| |||| ||| Sbjct: 5037880 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 5037821 Query: 770 agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 829 || ||||||||| || | ||||| ||| | |||||||||||| |||| || |||||| Sbjct: 5037820 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 5037761 Query: 830 tctggtgagcaatttgggaaatggaaaggattgcgagaaagcactgaccgggagattgta 889 ||||| || |||||| ||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 5037760 tctggcgaacaatttaggaaatggaaaggattgcgggaaagcactgatcgtgagattgtt 5037701 Query: 890 tggccaccaatggtcatcgtgatgaacaccctacttgaaaaagatgaagatgataag 946 |||||||||||||| | || |||||||| || | ||| ||||||| ||||||||| Sbjct: 5037700 tggccaccaatggtggttgttatgaacactgtattggaacaagatgaggatgataag 5037644 Score = 176 bits (89), Expect = 2e-40 Identities = 238/287 (82%), Gaps = 3/287 (1%) Strand = Plus / Minus Query: 956 atgggcaaccaagaacttcttgaatatttcagtgattatgctgcgaccaaagcacgccat 1015 ||||| |||||||| || |||| ||||||||||| |||||||| | ||||||||||||| Sbjct: 5036974 atggggaaccaagagctaattgattatttcagtgaatatgctgcaagcaaagcacgccat 5036915 Query: 1016 gcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaagctctgctgtg 1075 || ||||||||| ||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 5036914 gcctatggtccaaatgggcaccgtggcatgagtgtgctaatctttgacagctcggctgtg 5036855 Query: 1076 ggctatatggaggcagaacgtcttcataagcattttattgatcaaagaacagacagggac 1135 ||||||||||| ||||||||| | ||| | || ||| || |||||||||||||||| | Sbjct: 5036854 ggctatatggaagcagaacgtttgcatgatcactttgttcgtcaaagaacagacaggaat 5036795 Query: 1136 acttggcaga---atcgcagggttcctttcttacctggagggaagagacaattatatggt 1192 || ||| | | || || |||| | ||||||||||| ||||| || || | |||||| Sbjct: 5036794 acatggaacagtgctcacaaggttacattcttacctggtgggaaaaggcagctgtatggt 5036735 Query: 1193 ttcctagccagaaaggaagacatggagactttcaatagacactgcca 1239 ||| |||| | ||| || ||||||||||| ||||||||||| ||||| Sbjct: 5036734 ttcttagctacaaaagatgacatggagacattcaatagacattgcca 5036688 Score = 165 bits (83), Expect = 8e-37 Identities = 158/183 (86%) Strand = Plus / Minus Query: 1254 tgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaaatgagcg 1313 |||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||| Sbjct: 5035463 tgaaatatgagatgagatcttataatgagatggtggttacccaaatgaagcagatgagcg 5035404 Query: 1314 aagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcagcgctcta 1373 |||| || || ||||| ||||| ||||||||||| ||||||||| |||||||| ||||| Sbjct: 5035403 aagacaaccagcaactgaattacctgaagaacaaaatggttaagaaagagcagcactcta 5035344 Query: 1374 aagttgtagaagaaaccctgggtgttattacccagaaacttcgagagactatggaagaga 1433 || | ||||| || || || ||||| |||||||||||||| | ||||| |||||||||| Sbjct: 5035343 aattagtagaggatacattgagtgttgttacccagaaacttagggagacaatggaagaga 5035284 Query: 1434 ata 1436 ||| Sbjct: 5035283 ata 5035281 Score = 147 bits (74), Expect = 2e-31 Identities = 209/254 (82%) Strand = Plus / Minus Query: 623 ttaagtgttgatcagatacatgagcacactaggcaatggcattgtccggcatgcaaaaat 682 ||||||||||| |||||| |||| | |||||||||||||||||||| |||||||||||| Sbjct: 5047818 ttaagtgttgaacagataaatgaaaagactaggcaatggcattgtccagcatgcaaaaat 5047759 Query: 683 ggaccaggagcaattgactggttcaaagggctgcaatctttggtgacacatgctagaaca 742 | || || | | || ||||| ||||||| | || ||||| ||| |||||||||||| Sbjct: 5047758 gtacgtggtggagttacctggtacaaagggttacagcctttgatgaatcatgctagaaca 5047699 Query: 743 aagggttctaagagggttaagctccacagggaattggctgcattgctcgaagaggagatg 802 ||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||| || Sbjct: 5047698 aagggttctaagagggttaagcttcacagagaattggctgcattactggaagaggagctg 5047639 Query: 803 tctcgcaggggatcttctgtcgtaccatctggtgagcaatttgggaaatggaaaggattg 862 | ||| | |||| ||| | | | ||||||| ||| ||||| | |||||||||||| Sbjct: 5047638 tatcgtacgggaatttcaatggcatcatctggcgagttctttggaatctggaaaggattg 5047579 Query: 863 cgagaaagcactga 876 ||||||| |||||| Sbjct: 5047578 cgagaaaacactga 5047565 Score = 115 bits (58), Expect = 7e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 1005 aagcacgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaa 1064 ||||| ||||||| ||||| |||| ||||||| |||||||||||| ||||||||||||| Sbjct: 5046236 aagcatgccatgcttatggcccagatgggcacagtggcatgagtgcgctaatatttgaag 5046177 Query: 1065 gctctgctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaa 1124 | ||||| |||| ||||| |||||||||||| | ||||| || ||| |||||||||||| Sbjct: 5046176 gatctgccgtggcctataaggaggcagaacggttgcataatcactttgttgatcaaagaa 5046117 Query: 1125 cagaca 1130 |||||| Sbjct: 5046116 cagaca 5046111 Score = 99.6 bits (50), Expect = 4e-17 Identities = 134/162 (82%) Strand = Plus / Minus Query: 1254 tgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaaatgagcg 1313 ||||||| ||||||| |||| |||| |||||||| || ||||| ||||||| ||||| | Sbjct: 5045672 tgaaatacgagatgaaatcttataacgagatggtggttacccaattgaagcagatgagtg 5045613 Query: 1314 aagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcagcgctcta 1373 |||| || |||||||| |||||| ||||||| || ||||||||||||||| | |||| Sbjct: 5045612 aagacaaccaacaactgaattatgtgaagaatgagatggttaagacagagcgacattcta 5045553 Query: 1374 aagttgtagaagaaaccctgggtgttattacccagaaacttc 1415 ||| ||||||||| || |||||||| ||||||||||||| Sbjct: 5045552 aagaagtagaagaagccttgggtgttgagacccagaaacttc 5045511 Score = 95.6 bits (48), Expect = 6e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 1508 ttccatgatcagattgagaacattcacaaggccacagaagacaaggaaagcgagtttgag 1567 ||||||||||| || || || ||||||||||||||||| || || |||| | |||||||| Sbjct: 5034999 ttccatgatcaaatcgaaaaaattcacaaggccacagaggagaaagaaatcaagtttgag 5034940 Query: 1568 aggttgctgcaggaggagcgtgcgaaggctagacagtgtgatgtggattctgggactact 1627 | ||||||||| |||||||| || ||||||||||| ||||||| || ||||| | |||| Sbjct: 5034939 aagttgctgcaagaggagcgagcaaaggctagacaaagtgatgttgactctggaagtact 5034880 Query: 1628 gaaaatcg 1635 ||| |||| Sbjct: 5034879 gaagatcg 5034872 Score = 77.8 bits (39), Expect = 1e-10 Identities = 63/71 (88%) Strand = Plus / Minus Query: 367 agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 426 |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| |||| Sbjct: 5038235 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 5038176 Query: 427 tcctgaaagca 437 | ||||||||| Sbjct: 5038175 tactgaaagca 5038165 Score = 75.8 bits (38), Expect = 6e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 1665 tcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaataa 1724 ||||||| |||||||| ||||| | | |||||||||| |||||| ||| ||||| || | Sbjct: 5044838 tcatagattgccaggtgaaggatgcggaggagtttgatgctgaacaagatgaattgatca 5044779 Query: 1725 aagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtggagc 1784 || || || |||||||||| | | |||||| ||||| ||| ||||||| || |||| Sbjct: 5044778 aaacacacgaagagaagaaggcgaacgtcaagatggagtatatggcaaaggatgttgagc 5044719 Query: 1785 tcgagaaggagtttgaggccgctctcaccggtctgatggagaaaca 1830 ||||| ||||| || | ||||||||||| |||||||||||||||| Sbjct: 5044718 tcgaggaggagctttatgccgctctcacaagtctgatggagaaaca 5044673 Score = 71.9 bits (36), Expect = 9e-09 Identities = 132/164 (80%) Strand = Plus / Minus Query: 274 tcaaccttctgatcgtaggcctgctgctagaggcaatcccagggcatcatcacaaacaaa 333 ||||| |||||||| |||||||||||| ||||||| ||| ||| || |||||| || Sbjct: 5048401 tcaacattctgatcataggcctgctgccagaggcagtcctaggtcactgccacaaaataa 5048342 Query: 334 gtctacagaaccagacttgcaagcaccaaacccagttgtgactccacccctggcaaatgg 393 | ||||||| || | ||||||||||| |||||||||||| |||| || |||||||| Sbjct: 5048341 gcatacagaaacaaaattgcaagcaccgtgtccagttgtgactgcacctcttgcaaatgg 5048282 Query: 394 ttggcagtgggcatccaggcctcgcccatctggtcctgaaagca 437 || |||||||| | ||| | ||||| |||||||| |||| |||| Sbjct: 5048281 tttgcagtgggtacccaagtctcgctcatctggttctgagagca 5048238 Score = 63.9 bits (32), Expect = 2e-06 Identities = 107/132 (81%) Strand = Plus / Minus Query: 1664 ttcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaata 1723 |||||||| |||||||| ||||| || |||| ||||| || ||| ||||| || | || Sbjct: 5034690 ttcatagactgccaggtgaaggatgttgaggaatttgaagccgaacgagacaaactgatc 5034631 Query: 1724 aaagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtggag 1783 ||| |||||| |||||||||||| |||||||||| |||||| || | ||||| | ||| Sbjct: 5034630 aaattgcatgaagagaagaaggtgaagctcaagaaggagtacctggcgaaggaatttgag 5034571 Query: 1784 ctcgagaaggag 1795 || ||||||||| Sbjct: 5034570 cttgagaaggag 5034559 Score = 56.0 bits (28), Expect = 5e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 1559 gagtttgagaggttgctgcaggaggagc 1586 |||||||||||||||||||||||||||| Sbjct: 5045095 gagtttgagaggttgctgcaggaggagc 5045068 Score = 46.1 bits (23), Expect = 0.52 Identities = 71/87 (81%) Strand = Plus / Minus Query: 363 acccagttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccat 422 |||||||||||||| || | || |||||||| | |||||||| ||||| ||||| ||| Sbjct: 5048180 acccagttgtgactgcaactcttgcaaatggcttgcagtgggtgcccaggtctcgctcat 5048121 Query: 423 ctggtcctgaaagcagcaaggatgatg 449 ||| || |||||| ||||||||||| Sbjct: 5048120 ctgactctcaaagcaacaaggatgatg 5048094 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 552 catctgagaaaagttttgagactcgcaaaa 581 |||||||||||| |||||||||||| |||| Sbjct: 5047889 catctgagaaaaattttgagactcgaaaaa 5047860
>emb|AL831811.5|CNS08CAO Oryza sativa chromosome 12, . BAC OJ1561_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91053 Score = 216 bits (109), Expect = 2e-52 Identities = 250/297 (84%) Strand = Plus / Minus Query: 650 actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 709 ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| |||| Sbjct: 81314 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 81255 Query: 710 gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 769 ||||| ||| ||||| |||| ||||| | |||||||||||||| | ||| |||| ||| Sbjct: 81254 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 81195 Query: 770 agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 829 || ||||||||| || | ||||| ||| | |||||||||||| |||| || |||||| Sbjct: 81194 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 81135 Query: 830 tctggtgagcaatttgggaaatggaaaggattgcgagaaagcactgaccgggagattgta 889 ||||| || |||||| ||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 81134 tctggcgaacaatttaggaaatggaaaggattgcgggaaagcactgatcgtgagattgtt 81075 Query: 890 tggccaccaatggtcatcgtgatgaacaccctacttgaaaaagatgaagatgataag 946 |||||||||||||| | || |||||||| || | ||| ||||||| ||||||||| Sbjct: 81074 tggccaccaatggtggttgttatgaacactgtattggaacaagatgaggatgataag 81018 Score = 176 bits (89), Expect = 2e-40 Identities = 238/287 (82%), Gaps = 3/287 (1%) Strand = Plus / Minus Query: 956 atgggcaaccaagaacttcttgaatatttcagtgattatgctgcgaccaaagcacgccat 1015 ||||| |||||||| || |||| ||||||||||| |||||||| | ||||||||||||| Sbjct: 80348 atggggaaccaagagctaattgattatttcagtgaatatgctgcaagcaaagcacgccat 80289 Query: 1016 gcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaagctctgctgtg 1075 || ||||||||| ||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 80288 gcctatggtccaaatgggcaccgtggcatgagtgtgctaatctttgacagctcggctgtg 80229 Query: 1076 ggctatatggaggcagaacgtcttcataagcattttattgatcaaagaacagacagggac 1135 ||||||||||| ||||||||| | ||| | || ||| || |||||||||||||||| | Sbjct: 80228 ggctatatggaagcagaacgtttgcatgatcactttgttcgtcaaagaacagacaggaat 80169 Query: 1136 acttggcaga---atcgcagggttcctttcttacctggagggaagagacaattatatggt 1192 || ||| | | || || |||| | ||||||||||| ||||| || || | |||||| Sbjct: 80168 acatggaacagtgctcacaaggttacattcttacctggtgggaaaaggcagctgtatggt 80109 Query: 1193 ttcctagccagaaaggaagacatggagactttcaatagacactgcca 1239 ||| |||| | ||| || ||||||||||| ||||||||||| ||||| Sbjct: 80108 ttcttagctacaaaagatgacatggagacattcaatagacattgcca 80062 Score = 165 bits (83), Expect = 8e-37 Identities = 158/183 (86%) Strand = Plus / Minus Query: 1254 tgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaaatgagcg 1313 |||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||| Sbjct: 78837 tgaaatatgagatgagatcttataatgagatggtggttacccaaatgaagcagatgagcg 78778 Query: 1314 aagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcagcgctcta 1373 |||| || || ||||| ||||| ||||||||||| ||||||||| |||||||| ||||| Sbjct: 78777 aagacaaccagcaactgaattacctgaagaacaaaatggttaagaaagagcagcactcta 78718 Query: 1374 aagttgtagaagaaaccctgggtgttattacccagaaacttcgagagactatggaagaga 1433 || | ||||| || || || ||||| |||||||||||||| | ||||| |||||||||| Sbjct: 78717 aattagtagaggatacattgagtgttgttacccagaaacttagggagacaatggaagaga 78658 Query: 1434 ata 1436 ||| Sbjct: 78657 ata 78655 Score = 115 bits (58), Expect = 7e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 1005 aagcacgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaa 1064 ||||| ||||||| ||||| |||| ||||||| |||||||||||| ||||||||||||| Sbjct: 89609 aagcatgccatgcttatggcccagatgggcacagtggcatgagtgcgctaatatttgaag 89550 Query: 1065 gctctgctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaa 1124 | ||||| |||| ||||| |||||||||||| | ||||| || ||| |||||||||||| Sbjct: 89549 gatctgccgtggcctataaggaggcagaacggttgcataatcactttgttgatcaaagaa 89490 Query: 1125 cagaca 1130 |||||| Sbjct: 89489 cagaca 89484 Score = 99.6 bits (50), Expect = 4e-17 Identities = 134/162 (82%) Strand = Plus / Minus Query: 1254 tgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaaatgagcg 1313 ||||||| ||||||| |||| |||| |||||||| || ||||| ||||||| ||||| | Sbjct: 89045 tgaaatacgagatgaaatcttataacgagatggtggttacccaattgaagcagatgagtg 88986 Query: 1314 aagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcagcgctcta 1373 |||| || |||||||| |||||| ||||||| || ||||||||||||||| | |||| Sbjct: 88985 aagacaaccaacaactgaattatgtgaagaatgagatggttaagacagagcgacattcta 88926 Query: 1374 aagttgtagaagaaaccctgggtgttattacccagaaacttc 1415 ||| ||||||||| || |||||||| ||||||||||||| Sbjct: 88925 aagaagtagaagaagccttgggtgttgagacccagaaacttc 88884 Score = 95.6 bits (48), Expect = 6e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 1508 ttccatgatcagattgagaacattcacaaggccacagaagacaaggaaagcgagtttgag 1567 ||||||||||| || || || ||||||||||||||||| || || |||| | |||||||| Sbjct: 78373 ttccatgatcaaatcgaaaaaattcacaaggccacagaggagaaagaaatcaagtttgag 78314 Query: 1568 aggttgctgcaggaggagcgtgcgaaggctagacagtgtgatgtggattctgggactact 1627 | ||||||||| |||||||| || ||||||||||| ||||||| || ||||| | |||| Sbjct: 78313 aagttgctgcaagaggagcgagcaaaggctagacaaagtgatgttgactctggaagtact 78254 Query: 1628 gaaaatcg 1635 ||| |||| Sbjct: 78253 gaagatcg 78246 Score = 77.8 bits (39), Expect = 1e-10 Identities = 63/71 (88%) Strand = Plus / Minus Query: 367 agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 426 |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| |||| Sbjct: 81609 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 81550 Query: 427 tcctgaaagca 437 | ||||||||| Sbjct: 81549 tactgaaagca 81539 Score = 75.8 bits (38), Expect = 6e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 1665 tcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaataa 1724 ||||||| |||||||| ||||| | | |||||||||| |||||| ||| ||||| || | Sbjct: 88211 tcatagattgccaggtgaaggatgcggaggagtttgatgctgaacaagatgaattgatca 88152 Query: 1725 aagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtggagc 1784 || || || |||||||||| | | |||||| ||||| ||| ||||||| || |||| Sbjct: 88151 aaacacacgaagagaagaaggcgaacgtcaagatggagtatatggcaaaggatgttgagc 88092 Query: 1785 tcgagaaggagtttgaggccgctctcaccggtctgatggagaaaca 1830 ||||| ||||| || | ||||||||||| |||||||||||||||| Sbjct: 88091 tcgaggaggagctttatgccgctctcacaagtctgatggagaaaca 88046 Score = 63.9 bits (32), Expect = 2e-06 Identities = 107/132 (81%) Strand = Plus / Minus Query: 1664 ttcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaata 1723 |||||||| |||||||| ||||| || |||| ||||| || ||| ||||| || | || Sbjct: 78064 ttcatagactgccaggtgaaggatgttgaggaatttgaagccgaacgagacaaactgatc 78005 Query: 1724 aaagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtggag 1783 ||| |||||| |||||||||||| |||||||||| |||||| || | ||||| | ||| Sbjct: 78004 aaattgcatgaagagaagaaggtgaagctcaagaaggagtacctggcgaaggaatttgag 77945 Query: 1784 ctcgagaaggag 1795 || ||||||||| Sbjct: 77944 cttgagaaggag 77933 Score = 56.0 bits (28), Expect = 5e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 1559 gagtttgagaggttgctgcaggaggagc 1586 |||||||||||||||||||||||||||| Sbjct: 88468 gagtttgagaggttgctgcaggaggagc 88441 Score = 48.1 bits (24), Expect = 0.13 Identities = 93/116 (80%) Strand = Plus / Minus Query: 761 aagctccacagggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttct 820 ||||| ||||| |||||||||||||| || ||||||||| ||| ||| | |||| ||| Sbjct: 91053 aagcttcacagagaattggctgcattactggaagaggagctgtatcgtacgggaatttca 90994 Query: 821 gtcgtaccatctggtgagcaatttgggaaatggaaaggattgcgagaaagcactga 876 | | | ||||||| ||| ||||| | ||||||||||||||||||| |||||| Sbjct: 90993 atggcatcatctggcgagttctttggaatctggaaaggattgcgagaaaacactga 90938
>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 112231 Score = 216 bits (109), Expect = 2e-52 Identities = 250/297 (84%) Strand = Plus / Minus Query: 650 actaggcaatggcattgtccggcatgcaaaaatggaccaggagcaattgactggttcaaa 709 ||||||||||||||||| || ||||||||||||||||| || ||||||||||||| |||| Sbjct: 8593 actaggcaatggcattgcccagcatgcaaaaatggacctggtgcaattgactggtacaaa 8534 Query: 710 gggctgcaatctttggtgacacatgctagaacaaagggttctaagagggttaagctccac 769 ||||| ||| ||||| |||| ||||| | |||||||||||||| | ||| |||| ||| Sbjct: 8533 gggctacaacctttgatgactcatgccaaaacaaagggttctataaaggtcaagcgtcac 8474 Query: 770 agggaattggctgcattgctcgaagaggagatgtctcgcaggggatcttctgtcgtacca 829 || ||||||||| || | ||||| ||| | |||||||||||| |||| || |||||| Sbjct: 8473 agagaattggctagtttattggaagaagagctatctcgcaggggaacttcagtggtacca 8414 Query: 830 tctggtgagcaatttgggaaatggaaaggattgcgagaaagcactgaccgggagattgta 889 ||||| || |||||| ||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 8413 tctggcgaacaatttaggaaatggaaaggattgcgggaaagcactgatcgtgagattgtt 8354 Query: 890 tggccaccaatggtcatcgtgatgaacaccctacttgaaaaagatgaagatgataag 946 |||||||||||||| | || |||||||| || | ||| ||||||| ||||||||| Sbjct: 8353 tggccaccaatggtggttgttatgaacactgtattggaacaagatgaggatgataag 8297 Score = 176 bits (89), Expect = 2e-40 Identities = 238/287 (82%), Gaps = 3/287 (1%) Strand = Plus / Minus Query: 956 atgggcaaccaagaacttcttgaatatttcagtgattatgctgcgaccaaagcacgccat 1015 ||||| |||||||| || |||| ||||||||||| |||||||| | ||||||||||||| Sbjct: 7627 atggggaaccaagagctaattgattatttcagtgaatatgctgcaagcaaagcacgccat 7568 Query: 1016 gcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaagctctgctgtg 1075 || ||||||||| ||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 7567 gcctatggtccaaatgggcaccgtggcatgagtgtgctaatctttgacagctcggctgtg 7508 Query: 1076 ggctatatggaggcagaacgtcttcataagcattttattgatcaaagaacagacagggac 1135 ||||||||||| ||||||||| | ||| | || ||| || |||||||||||||||| | Sbjct: 7507 ggctatatggaagcagaacgtttgcatgatcactttgttcgtcaaagaacagacaggaat 7448 Query: 1136 acttggcaga---atcgcagggttcctttcttacctggagggaagagacaattatatggt 1192 || ||| | | || || |||| | ||||||||||| ||||| || || | |||||| Sbjct: 7447 acatggaacagtgctcacaaggttacattcttacctggtgggaaaaggcagctgtatggt 7388 Query: 1193 ttcctagccagaaaggaagacatggagactttcaatagacactgcca 1239 ||| |||| | ||| || ||||||||||| ||||||||||| ||||| Sbjct: 7387 ttcttagctacaaaagatgacatggagacattcaatagacattgcca 7341 Score = 165 bits (83), Expect = 8e-37 Identities = 158/183 (86%) Strand = Plus / Minus Query: 1254 tgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaaatgagcg 1313 |||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||| Sbjct: 6116 tgaaatatgagatgagatcttataatgagatggtggttacccaaatgaagcagatgagcg 6057 Query: 1314 aagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcagcgctcta 1373 |||| || || ||||| ||||| ||||||||||| ||||||||| |||||||| ||||| Sbjct: 6056 aagacaaccagcaactgaattacctgaagaacaaaatggttaagaaagagcagcactcta 5997 Query: 1374 aagttgtagaagaaaccctgggtgttattacccagaaacttcgagagactatggaagaga 1433 || | ||||| || || || ||||| |||||||||||||| | ||||| |||||||||| Sbjct: 5996 aattagtagaggatacattgagtgttgttacccagaaacttagggagacaatggaagaga 5937 Query: 1434 ata 1436 ||| Sbjct: 5936 ata 5934 Score = 147 bits (74), Expect = 2e-31 Identities = 209/254 (82%) Strand = Plus / Minus Query: 623 ttaagtgttgatcagatacatgagcacactaggcaatggcattgtccggcatgcaaaaat 682 ||||||||||| |||||| |||| | |||||||||||||||||||| |||||||||||| Sbjct: 18471 ttaagtgttgaacagataaatgaaaagactaggcaatggcattgtccagcatgcaaaaat 18412 Query: 683 ggaccaggagcaattgactggttcaaagggctgcaatctttggtgacacatgctagaaca 742 | || || | | || ||||| ||||||| | || ||||| ||| |||||||||||| Sbjct: 18411 gtacgtggtggagttacctggtacaaagggttacagcctttgatgaatcatgctagaaca 18352 Query: 743 aagggttctaagagggttaagctccacagggaattggctgcattgctcgaagaggagatg 802 ||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||| || Sbjct: 18351 aagggttctaagagggttaagcttcacagagaattggctgcattactggaagaggagctg 18292 Query: 803 tctcgcaggggatcttctgtcgtaccatctggtgagcaatttgggaaatggaaaggattg 862 | ||| | |||| ||| | | | ||||||| ||| ||||| | |||||||||||| Sbjct: 18291 tatcgtacgggaatttcaatggcatcatctggcgagttctttggaatctggaaaggattg 18232 Query: 863 cgagaaagcactga 876 ||||||| |||||| Sbjct: 18231 cgagaaaacactga 18218 Score = 115 bits (58), Expect = 7e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 1005 aagcacgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaa 1064 ||||| ||||||| ||||| |||| ||||||| |||||||||||| ||||||||||||| Sbjct: 16889 aagcatgccatgcttatggcccagatgggcacagtggcatgagtgcgctaatatttgaag 16830 Query: 1065 gctctgctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaa 1124 | ||||| |||| ||||| |||||||||||| | ||||| || ||| |||||||||||| Sbjct: 16829 gatctgccgtggcctataaggaggcagaacggttgcataatcactttgttgatcaaagaa 16770 Query: 1125 cagaca 1130 |||||| Sbjct: 16769 cagaca 16764 Score = 99.6 bits (50), Expect = 4e-17 Identities = 134/162 (82%) Strand = Plus / Minus Query: 1254 tgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaaatgagcg 1313 ||||||| ||||||| |||| |||| |||||||| || ||||| ||||||| ||||| | Sbjct: 16325 tgaaatacgagatgaaatcttataacgagatggtggttacccaattgaagcagatgagtg 16266 Query: 1314 aagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcagcgctcta 1373 |||| || |||||||| |||||| ||||||| || ||||||||||||||| | |||| Sbjct: 16265 aagacaaccaacaactgaattatgtgaagaatgagatggttaagacagagcgacattcta 16206 Query: 1374 aagttgtagaagaaaccctgggtgttattacccagaaacttc 1415 ||| ||||||||| || |||||||| ||||||||||||| Sbjct: 16205 aagaagtagaagaagccttgggtgttgagacccagaaacttc 16164 Score = 95.6 bits (48), Expect = 6e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 1508 ttccatgatcagattgagaacattcacaaggccacagaagacaaggaaagcgagtttgag 1567 ||||||||||| || || || ||||||||||||||||| || || |||| | |||||||| Sbjct: 5652 ttccatgatcaaatcgaaaaaattcacaaggccacagaggagaaagaaatcaagtttgag 5593 Query: 1568 aggttgctgcaggaggagcgtgcgaaggctagacagtgtgatgtggattctgggactact 1627 | ||||||||| |||||||| || ||||||||||| ||||||| || ||||| | |||| Sbjct: 5592 aagttgctgcaagaggagcgagcaaaggctagacaaagtgatgttgactctggaagtact 5533 Query: 1628 gaaaatcg 1635 ||| |||| Sbjct: 5532 gaagatcg 5525 Score = 77.8 bits (39), Expect = 1e-10 Identities = 63/71 (88%) Strand = Plus / Minus Query: 367 agttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccatctgg 426 |||||||||| |||| |||||||||||||||||||||| | ||||| || ||||| |||| Sbjct: 8888 agttgtgactgcacctctggcaaatggttggcagtggggagccaggtcttgcccacctgg 8829 Query: 427 tcctgaaagca 437 | ||||||||| Sbjct: 8828 tactgaaagca 8818 Score = 75.8 bits (38), Expect = 6e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 1665 tcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaataa 1724 ||||||| |||||||| ||||| | | |||||||||| |||||| ||| ||||| || | Sbjct: 15491 tcatagattgccaggtgaaggatgcggaggagtttgatgctgaacaagatgaattgatca 15432 Query: 1725 aagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtggagc 1784 || || || |||||||||| | | |||||| ||||| ||| ||||||| || |||| Sbjct: 15431 aaacacacgaagagaagaaggcgaacgtcaagatggagtatatggcaaaggatgttgagc 15372 Query: 1785 tcgagaaggagtttgaggccgctctcaccggtctgatggagaaaca 1830 ||||| ||||| || | ||||||||||| |||||||||||||||| Sbjct: 15371 tcgaggaggagctttatgccgctctcacaagtctgatggagaaaca 15326 Score = 71.9 bits (36), Expect = 9e-09 Identities = 132/164 (80%) Strand = Plus / Minus Query: 274 tcaaccttctgatcgtaggcctgctgctagaggcaatcccagggcatcatcacaaacaaa 333 ||||| |||||||| |||||||||||| ||||||| ||| ||| || |||||| || Sbjct: 19054 tcaacattctgatcataggcctgctgccagaggcagtcctaggtcactgccacaaaataa 18995 Query: 334 gtctacagaaccagacttgcaagcaccaaacccagttgtgactccacccctggcaaatgg 393 | ||||||| || | ||||||||||| |||||||||||| |||| || |||||||| Sbjct: 18994 gcatacagaaacaaaattgcaagcaccgtgtccagttgtgactgcacctcttgcaaatgg 18935 Query: 394 ttggcagtgggcatccaggcctcgcccatctggtcctgaaagca 437 || |||||||| | ||| | ||||| |||||||| |||| |||| Sbjct: 18934 tttgcagtgggtacccaagtctcgctcatctggttctgagagca 18891 Score = 63.9 bits (32), Expect = 2e-06 Identities = 107/132 (81%) Strand = Plus / Minus Query: 1664 ttcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaata 1723 |||||||| |||||||| ||||| || |||| ||||| || ||| ||||| || | || Sbjct: 5343 ttcatagactgccaggtgaaggatgttgaggaatttgaagccgaacgagacaaactgatc 5284 Query: 1724 aaagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtggag 1783 ||| |||||| |||||||||||| |||||||||| |||||| || | ||||| | ||| Sbjct: 5283 aaattgcatgaagagaagaaggtgaagctcaagaaggagtacctggcgaaggaatttgag 5224 Query: 1784 ctcgagaaggag 1795 || ||||||||| Sbjct: 5223 cttgagaaggag 5212 Score = 56.0 bits (28), Expect = 5e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 1559 gagtttgagaggttgctgcaggaggagc 1586 |||||||||||||||||||||||||||| Sbjct: 15748 gagtttgagaggttgctgcaggaggagc 15721 Score = 46.1 bits (23), Expect = 0.52 Identities = 71/87 (81%) Strand = Plus / Minus Query: 363 acccagttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccat 422 |||||||||||||| || | || |||||||| | |||||||| ||||| ||||| ||| Sbjct: 18833 acccagttgtgactgcaactcttgcaaatggcttgcagtgggtgcccaggtctcgctcat 18774 Query: 423 ctggtcctgaaagcagcaaggatgatg 449 ||| || |||||| ||||||||||| Sbjct: 18773 ctgactctcaaagcaacaaggatgatg 18747 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 552 catctgagaaaagttttgagactcgcaaaa 581 |||||||||||| |||||||||||| |||| Sbjct: 18542 catctgagaaaaattttgagactcgaaaaa 18513
>ref|NM_001072893.1| Oryza sativa (japonica cultivar-group) Os12g0197700 (Os12g0197700) mRNA, complete cds Length = 2571 Score = 147 bits (74), Expect = 2e-31 Identities = 209/254 (82%) Strand = Plus / Plus Query: 623 ttaagtgttgatcagatacatgagcacactaggcaatggcattgtccggcatgcaaaaat 682 ||||||||||| |||||| |||| | |||||||||||||||||||| |||||||||||| Sbjct: 876 ttaagtgttgaacagataaatgaaaagactaggcaatggcattgtccagcatgcaaaaat 935 Query: 683 ggaccaggagcaattgactggttcaaagggctgcaatctttggtgacacatgctagaaca 742 | || || | | || ||||| ||||||| | || ||||| ||| |||||||||||| Sbjct: 936 gtacgtggtggagttacctggtacaaagggttacagcctttgatgaatcatgctagaaca 995 Query: 743 aagggttctaagagggttaagctccacagggaattggctgcattgctcgaagaggagatg 802 ||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||| || Sbjct: 996 aagggttctaagagggttaagcttcacagagaattggctgcattactggaagaggagctg 1055 Query: 803 tctcgcaggggatcttctgtcgtaccatctggtgagcaatttgggaaatggaaaggattg 862 | ||| | |||| ||| | | | ||||||| ||| ||||| | |||||||||||| Sbjct: 1056 tatcgtacgggaatttcaatggcatcatctggcgagttctttggaatctggaaaggattg 1115 Query: 863 cgagaaagcactga 876 ||||||| |||||| Sbjct: 1116 cgagaaaacactga 1129 Score = 115 bits (58), Expect = 7e-22 Identities = 109/126 (86%) Strand = Plus / Plus Query: 1005 aagcacgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaa 1064 ||||| ||||||| ||||| |||| ||||||| |||||||||||| ||||||||||||| Sbjct: 1258 aagcatgccatgcttatggcccagatgggcacagtggcatgagtgcgctaatatttgaag 1317 Query: 1065 gctctgctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaa 1124 | ||||| |||| ||||| |||||||||||| | ||||| || ||| |||||||||||| Sbjct: 1318 gatctgccgtggcctataaggaggcagaacggttgcataatcactttgttgatcaaagaa 1377 Query: 1125 cagaca 1130 |||||| Sbjct: 1378 cagaca 1383 Score = 111 bits (56), Expect = 1e-20 Identities = 218/272 (80%) Strand = Plus / Plus Query: 1559 gagtttgagaggttgctgcaggaggagcgtgcgaaggctagacagtgtgatgtggattct 1618 |||||||||||||||||||||||||||| || | |||| | |||||||||| || ||| Sbjct: 1806 gagtttgagaggttgctgcaggaggagctagcaagagctatagagtgtgatgttgactct 1865 Query: 1619 gggactactgaaaatcgtagcctaaggaaggaacaggtacagcggttcatagagtgccag 1678 | ||||| |||||| | | |||||| |||||||| |||| | ||||||| |||||| Sbjct: 1866 gaaactacagaaaattgcaagctaagggaggaacagatacaaagaatcatagattgccag 1925 Query: 1679 gttaaggacgtgcaggagtttgaggctgaaagagacgaattaataaaagggcatgaggag 1738 || ||||| | | |||||||||| |||||| ||| ||||| || ||| || || ||| Sbjct: 1926 gtgaaggatgcggaggagtttgatgctgaacaagatgaattgatcaaaacacacgaagag 1985 Query: 1739 aagaaggtgcagctcaagaaagagtacatgacaaaggaggtggagctcgagaaggagttt 1798 ||||||| | | |||||| ||||| ||| ||||||| || ||||||||| ||||| || Sbjct: 1986 aagaaggcgaacgtcaagatggagtatatggcaaaggatgttgagctcgaggaggagctt 2045 Query: 1799 gaggccgctctcaccggtctgatggagaaaca 1830 | ||||||||||| |||||||||||||||| Sbjct: 2046 tatgccgctctcacaagtctgatggagaaaca 2077 Score = 99.6 bits (50), Expect = 4e-17 Identities = 134/162 (82%) Strand = Plus / Plus Query: 1254 tgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaaatgagcg 1313 ||||||| ||||||| |||| |||| |||||||| || ||||| ||||||| ||||| | Sbjct: 1501 tgaaatacgagatgaaatcttataacgagatggtggttacccaattgaagcagatgagtg 1560 Query: 1314 aagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcagcgctcta 1373 |||| || |||||||| |||||| ||||||| || ||||||||||||||| | |||| Sbjct: 1561 aagacaaccaacaactgaattatgtgaagaatgagatggttaagacagagcgacattcta 1620 Query: 1374 aagttgtagaagaaaccctgggtgttattacccagaaacttc 1415 ||| ||||||||| || |||||||| ||||||||||||| Sbjct: 1621 aagaagtagaagaagccttgggtgttgagacccagaaacttc 1662 Score = 71.9 bits (36), Expect = 9e-09 Identities = 132/164 (80%) Strand = Plus / Plus Query: 274 tcaaccttctgatcgtaggcctgctgctagaggcaatcccagggcatcatcacaaacaaa 333 ||||| |||||||| |||||||||||| ||||||| ||| ||| || |||||| || Sbjct: 293 tcaacattctgatcataggcctgctgccagaggcagtcctaggtcactgccacaaaataa 352 Query: 334 gtctacagaaccagacttgcaagcaccaaacccagttgtgactccacccctggcaaatgg 393 | ||||||| || | ||||||||||| |||||||||||| |||| || |||||||| Sbjct: 353 gcatacagaaacaaaattgcaagcaccgtgtccagttgtgactgcacctcttgcaaatgg 412 Query: 394 ttggcagtgggcatccaggcctcgcccatctggtcctgaaagca 437 || |||||||| | ||| | ||||| |||||||| |||| |||| Sbjct: 413 tttgcagtgggtacccaagtctcgctcatctggttctgagagca 456 Score = 46.1 bits (23), Expect = 0.52 Identities = 71/87 (81%) Strand = Plus / Plus Query: 363 acccagttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccat 422 |||||||||||||| || | || |||||||| | |||||||| ||||| ||||| ||| Sbjct: 514 acccagttgtgactgcaactcttgcaaatggcttgcagtgggtgcccaggtctcgctcat 573 Query: 423 ctggtcctgaaagcagcaaggatgatg 449 ||| || |||||| ||||||||||| Sbjct: 574 ctgactctcaaagcaacaaggatgatg 600 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 552 catctgagaaaagttttgagactcgcaaaa 581 |||||||||||| |||||||||||| |||| Sbjct: 805 catctgagaaaaattttgagactcgaaaaa 834
>dbj|AK100699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114M02, full insert sequence Length = 2570 Score = 131 bits (66), Expect = 1e-26 Identities = 208/254 (81%), Gaps = 1/254 (0%) Strand = Plus / Plus Query: 623 ttaagtgttgatcagatacatgagcacactaggcaatggcattgtccggcatgcaaaaat 682 ||||||||||| |||||| |||| | |||||||||||||||||||| |||||||||| | Sbjct: 876 ttaagtgttgaacagataaatgaaaagactaggcaatggcattgtccagcatgcaaaa-t 934 Query: 683 ggaccaggagcaattgactggttcaaagggctgcaatctttggtgacacatgctagaaca 742 | || || | | || ||||| ||||||| | || ||||| ||| |||||||||||| Sbjct: 935 gtacgtggtggagttacctggtacaaagggttacagcctttgatgaatcatgctagaaca 994 Query: 743 aagggttctaagagggttaagctccacagggaattggctgcattgctcgaagaggagatg 802 ||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||| || Sbjct: 995 aagggttctaagagggttaagcttcacagagaattggctgcattactggaagaggagctg 1054 Query: 803 tctcgcaggggatcttctgtcgtaccatctggtgagcaatttgggaaatggaaaggattg 862 | ||| | |||| ||| | | | ||||||| ||| ||||| | |||||||||||| Sbjct: 1055 tatcgtacgggaatttcaatggcatcatctggcgagttctttggaatctggaaaggattg 1114 Query: 863 cgagaaagcactga 876 ||||||| |||||| Sbjct: 1115 cgagaaaacactga 1128 Score = 115 bits (58), Expect = 7e-22 Identities = 109/126 (86%) Strand = Plus / Plus Query: 1005 aagcacgccatgcatatggtccaggtgggcaccgtggcatgagtgtgctaatatttgaaa 1064 ||||| ||||||| ||||| |||| ||||||| |||||||||||| ||||||||||||| Sbjct: 1257 aagcatgccatgcttatggcccagatgggcacagtggcatgagtgcgctaatatttgaag 1316 Query: 1065 gctctgctgtgggctatatggaggcagaacgtcttcataagcattttattgatcaaagaa 1124 | ||||| |||| ||||| |||||||||||| | ||||| || ||| |||||||||||| Sbjct: 1317 gatctgccgtggcctataaggaggcagaacggttgcataatcactttgttgatcaaagaa 1376 Query: 1125 cagaca 1130 |||||| Sbjct: 1377 cagaca 1382 Score = 111 bits (56), Expect = 1e-20 Identities = 218/272 (80%) Strand = Plus / Plus Query: 1559 gagtttgagaggttgctgcaggaggagcgtgcgaaggctagacagtgtgatgtggattct 1618 |||||||||||||||||||||||||||| || | |||| | |||||||||| || ||| Sbjct: 1805 gagtttgagaggttgctgcaggaggagctagcaagagctatagagtgtgatgttgactct 1864 Query: 1619 gggactactgaaaatcgtagcctaaggaaggaacaggtacagcggttcatagagtgccag 1678 | ||||| |||||| | | |||||| |||||||| |||| | ||||||| |||||| Sbjct: 1865 gaaactacagaaaattgcaagctaagggaggaacagatacaaagaatcatagattgccag 1924 Query: 1679 gttaaggacgtgcaggagtttgaggctgaaagagacgaattaataaaagggcatgaggag 1738 || ||||| | | |||||||||| |||||| ||| ||||| || ||| || || ||| Sbjct: 1925 gtgaaggatgcggaggagtttgatgctgaacaagatgaattgatcaaaacacacgaagag 1984 Query: 1739 aagaaggtgcagctcaagaaagagtacatgacaaaggaggtggagctcgagaaggagttt 1798 ||||||| | | |||||| ||||| ||| ||||||| || ||||||||| ||||| || Sbjct: 1985 aagaaggcgaacgtcaagatggagtatatggcaaaggatgttgagctcgaggaggagctt 2044 Query: 1799 gaggccgctctcaccggtctgatggagaaaca 1830 | ||||||||||| |||||||||||||||| Sbjct: 2045 tatgccgctctcacaagtctgatggagaaaca 2076 Score = 99.6 bits (50), Expect = 4e-17 Identities = 134/162 (82%) Strand = Plus / Plus Query: 1254 tgaaatatgagatgagatctcataatgagatggtagtggcccaaatgaagcaaatgagcg 1313 ||||||| ||||||| |||| |||| |||||||| || ||||| ||||||| ||||| | Sbjct: 1500 tgaaatacgagatgaaatcttataacgagatggtggttacccaattgaagcagatgagtg 1559 Query: 1314 aagataatcaacaactcaattatctgaagaacaaggtggttaagacagagcagcgctcta 1373 |||| || |||||||| |||||| ||||||| || ||||||||||||||| | |||| Sbjct: 1560 aagacaaccaacaactgaattatgtgaagaatgagatggttaagacagagcgacattcta 1619 Query: 1374 aagttgtagaagaaaccctgggtgttattacccagaaacttc 1415 ||| ||||||||| || |||||||| ||||||||||||| Sbjct: 1620 aagaagtagaagaagccttgggtgttgagacccagaaacttc 1661 Score = 71.9 bits (36), Expect = 9e-09 Identities = 132/164 (80%) Strand = Plus / Plus Query: 274 tcaaccttctgatcgtaggcctgctgctagaggcaatcccagggcatcatcacaaacaaa 333 ||||| |||||||| |||||||||||| ||||||| ||| ||| || |||||| || Sbjct: 293 tcaacattctgatcataggcctgctgccagaggcagtcctaggtcactgccacaaaataa 352 Query: 334 gtctacagaaccagacttgcaagcaccaaacccagttgtgactccacccctggcaaatgg 393 | ||||||| || | ||||||||||| |||||||||||| |||| || |||||||| Sbjct: 353 gcatacagaaacaaaattgcaagcaccgtgtccagttgtgactgcacctcttgcaaatgg 412 Query: 394 ttggcagtgggcatccaggcctcgcccatctggtcctgaaagca 437 || |||||||| | ||| | ||||| |||||||| |||| |||| Sbjct: 413 tttgcagtgggtacccaagtctcgctcatctggttctgagagca 456 Score = 46.1 bits (23), Expect = 0.52 Identities = 71/87 (81%) Strand = Plus / Plus Query: 363 acccagttgtgactccacccctggcaaatggttggcagtgggcatccaggcctcgcccat 422 |||||||||||||| || | || |||||||| | |||||||| ||||| ||||| ||| Sbjct: 514 acccagttgtgactgcaactcttgcaaatggcttgcagtgggtgcccaggtctcgctcat 573 Query: 423 ctggtcctgaaagcagcaaggatgatg 449 ||| || |||||| ||||||||||| Sbjct: 574 ctgactctcaaagcaacaaggatgatg 600 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 552 catctgagaaaagttttgagactcgcaaaa 581 |||||||||||| |||||||||||| |||| Sbjct: 805 catctgagaaaaattttgagactcgaaaaa 834
>gb|AY110352.1| Zea mays CL12989_2 mRNA sequence Length = 561 Score = 91.7 bits (46), Expect = 1e-14 Identities = 186/232 (80%), Gaps = 3/232 (1%) Strand = Plus / Minus Query: 1562 tttgagaggttgctgcaggaggagcgtgcgaaggctagacagtgtgatgtggattctggg 1621 ||||||| |||||||||||||||||| | |||||||||| | |||||| |||||||| Sbjct: 559 tttgagaagttgctgcaggaggagcgctcaaaggctagacgctttgatgttgattctgga 500 Query: 1622 actac---tgaaaatcgtagcctaaggaaggaacaggtacagcggttcatagagtgccag 1678 ||||| ||| |||||| |||||||||||||| |||||| |||||| || |||||| Sbjct: 499 actaccgaagaagatcgtaagctaaggaaggaacatgtacagaagttcattgattgccag 440 Query: 1679 gttaaggacgtgcaggagtttgaggctgaaagagacgaattaataaaagggcatgaggag 1738 || ||| | ||| |||||||| ||||| | || || | || ||||| || |||||| Sbjct: 439 gtcaagaatgtggcagagtttgaagctgagcgggatgagctgatcaaaggccacgaggag 380 Query: 1739 aagaaggtgcagctcaagaaagagtacatgacaaaggaggtggagctcgaga 1790 |||||| || ||||||||||| | ||||||| |||||| ||||||| |||| Sbjct: 379 aagaagatgaagctcaagaaacaatacatgaagaaggagctggagctggaga 328
>emb|CT828098.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN027P05, full insert sequence Length = 522 Score = 56.0 bits (28), Expect = 5e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 1664 ttcatagagtgccaggttaaggacgtgcaggagtttgaggctgaaagagacgaattaata 1723 |||||||| |||||||| ||||| || |||| ||||| || ||| ||||| || | || Sbjct: 52 ttcatagactgccaggtgaaggatgttgaggaatttgaagccgaacgagacaaactgatc 111 Query: 1724 aaagggcatgaggagaagaaggtgcagctcaagaaagagtacatgacaaaggaggtggag 1783 ||| |||||| |||||||||||| |||| ||||| |||||| || | ||||| | ||| Sbjct: 112 aaattgcatgaagagaagaaggtgaagctgaagaaggagtacctggcgaaggaatttgag 171 Query: 1784 ctcgagaaggag 1795 || ||||||||| Sbjct: 172 cttgagaaggag 183
>gb|AC105268.2| Homo sapiens chromosome 1 clone RP5-1107G8, complete sequence Length = 148970 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1152 gggttcctttcttacctggaggga 1175 |||||||||||||||||||||||| Sbjct: 123427 gggttcctttcttacctggaggga 123450
>emb|CU024887.12| M.truncatula DNA sequence from clone MTH2-174G4 on chromosome 3, complete sequence Length = 113443 Score = 46.1 bits (23), Expect = 0.52 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1083 tggaggcagaacgtcttcataagcattttattgatcaaagaac 1125 |||||||||||||||| || || ||||||| ||||||| |||| Sbjct: 100011 tggaggcagaacgtctgcacaaacattttactgatcaaggaac 99969 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 956 atgggcaaccaagaacttcttgaatattt 984 |||||||||||||| |||||||| ||||| Sbjct: 111860 atgggcaaccaagagcttcttgactattt 111832
>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3, complete sequence Length = 114882 Score = 46.1 bits (23), Expect = 0.52 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1083 tggaggcagaacgtcttcataagcattttattgatcaaagaac 1125 |||||||||||||||| || || ||||||| ||||||| |||| Sbjct: 23640 tggaggcagaacgtctgcacaaacattttactgatcaaggaac 23598 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 956 atgggcaaccaagaacttcttgaatattt 984 |||||||||||||| |||||||| ||||| Sbjct: 35489 atgggcaaccaagagcttcttgactattt 35461
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1327 actcaattatctgaagaacaag 1348 |||||||||||||||||||||| Sbjct: 4194034 actcaattatctgaagaacaag 4194055
>tpg|BK005082.1| TPA_exp: Danio rerio Hoxb3a variant 2 mRNA, complete cds Length = 1728 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1777 ggtggagctcgagaaggagttt 1798 |||||||||||||||||||||| Sbjct: 1050 ggtggagctcgagaaggagttt 1071
>tpg|BK005081.1| TPA_exp: Danio rerio Hoxb3a variant 1 mRNA, complete cds Length = 1646 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1777 ggtggagctcgagaaggagttt 1798 |||||||||||||||||||||| Sbjct: 968 ggtggagctcgagaaggagttt 989
>ref|NW_001091927.1| Theileria annulata strain Ankara clone C9 Length = 1979170 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 825 taccatctggtgagcaatttgg 846 |||||||||||||||||||||| Sbjct: 1162487 taccatctggtgagcaatttgg 1162466
>ref|NM_131117.3| Danio rerio homeo box B3a (hoxb3a), mRNA gb|BC095559.1| Danio rerio homeo box B3a, mRNA (cDNA clone MGC:111819 IMAGE:7428365), complete cds Length = 2107 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1777 ggtggagctcgagaaggagttt 1798 |||||||||||||||||||||| Sbjct: 1388 ggtggagctcgagaaggagttt 1409
>emb|CR751227.13| Zebrafish DNA sequence from clone DKEY-178D9 in linkage group 3, complete sequence Length = 114387 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1777 ggtggagctcgagaaggagttt 1798 |||||||||||||||||||||| Sbjct: 96370 ggtggagctcgagaaggagttt 96349
>ref|XM_947213.1| Theileria annulata strain Ankara pre-mRNA splicing factor (TA13035) partial mRNA Length = 2082 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 825 taccatctggtgagcaatttgg 846 |||||||||||||||||||||| Sbjct: 1903 taccatctggtgagcaatttgg 1882
>gb|AC161423.1| Mus musculus BAC clone RP23-291E12 from chromosome 16, complete sequence Length = 226870 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 924 ttgaaaaagatgaagatgataa 945 |||||||||||||||||||||| Sbjct: 105905 ttgaaaaagatgaagatgataa 105884
>emb|AL645782.2| Zebrafish DNA sequence from clone BUSM1-254O17 in linkage group 3 Contains the hoxb1a, hoxb2a, hoxb3a, hoxb4a, hoxb5a, hoxb6a, hoxb7a and hob8a genes and three CpG islands, complete sequence Length = 119385 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1777 ggtggagctcgagaaggagttt 1798 |||||||||||||||||||||| Sbjct: 59320 ggtggagctcgagaaggagttt 59341
>emb|AJ537509.1|DRE537509 Danio rerio mRNA for Hoxb3a protein Length = 1254 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1777 ggtggagctcgagaaggagttt 1798 |||||||||||||||||||||| Sbjct: 576 ggtggagctcgagaaggagttt 597
>gb|AC131683.4| Mus musculus BAC clone RP23-359C21 from 16, complete sequence Length = 200615 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 924 ttgaaaaagatgaagatgataa 945 |||||||||||||||||||||| Sbjct: 141535 ttgaaaaagatgaagatgataa 141514
>emb|CR354433.25| Zebrafish DNA sequence from clone DKEY-157G16 in linkage group 23, complete sequence Length = 205769 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 108382 tcataagcattttattgatca 108402
>ref|NM_001060777.1| Oryza sativa (japonica cultivar-group) Os04g0674700 (Os04g0674700) mRNA, complete cds Length = 1897 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tccggcgatcgacgcggcggc 85 ||||||||||||||||||||| Sbjct: 73 tccggcgatcgacgcggcggc 93
>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence Length = 2646969 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tccggcgatcgacgcggcggcgggc 89 |||||||||||||||| |||||||| Sbjct: 939432 tccggcgatcgacgcgccggcgggc 939456
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 tgaaatatgagatgagatctcataa 1278 |||||||||||||||| |||||||| Sbjct: 16918453 tgaaatatgagatgagctctcataa 16918477
>ref|XM_001120101.1| PREDICTED: Apis mellifera similar to Homeobox protein Hox-A3 (Hox-1.5) (MO-10) (LOC724297), mRNA Length = 1110 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1777 ggtggagctcgagaaggagtt 1797 ||||||||||||||||||||| Sbjct: 333 ggtggagctcgagaaggagtt 353
>emb|CR382284.14| Zebrafish DNA sequence from clone DKEY-95H16 in linkage group 8, complete sequence Length = 205882 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 922 acttgaaaaagatgaagatga 942 ||||||||||||||||||||| Sbjct: 158033 acttgaaaaagatgaagatga 158053
>emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in linkage group 10, complete sequence Length = 202134 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 ctggcaaatggttggcagtgg 403 ||||||||||||||||||||| Sbjct: 115940 ctggcaaatggttggcagtgg 115960
>gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete sequence Length = 294716 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1542 cagaagacaaggaaagcgagt 1562 ||||||||||||||||||||| Sbjct: 57557 cagaagacaaggaaagcgagt 57577
>ref|NM_122263.2| Arabidopsis thaliana SGS3 (SUPPRESSOR OF GENE SILENCING 3) (SGS3) mRNA, complete cds Length = 2145 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 941 gataagtggttaggcatgggcaaccaaga 969 ||||||||| | ||||||||||||||||| Sbjct: 1049 gataagtggctcggcatgggcaaccaaga 1077
>gb|AC126688.4| Mus musculus BAC clone RP23-152P20 from chromosome 7, complete sequence Length = 205673 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1826 aaacataggccaggcaccttc 1846 ||||||||||||||||||||| Sbjct: 22342 aaacataggccaggcaccttc 22362
>gb|AC123935.4| Mus musculus BAC clone RP23-354J3 from chromosome 13, complete sequence Length = 219370 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1730 catgaggagaagaaggtgcag 1750 ||||||||||||||||||||| Sbjct: 110199 catgaggagaagaaggtgcag 110179
>gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, complete sequence Length = 229964 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1826 aaacataggccaggcaccttc 1846 ||||||||||||||||||||| Sbjct: 221628 aaacataggccaggcaccttc 221648
>gb|AC112717.5| Homo sapiens BAC clone RP11-481H16 from 4, complete sequence Length = 189406 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1538 gccacagaagacaaggaaagc 1558 ||||||||||||||||||||| Sbjct: 39991 gccacagaagacaaggaaagc 40011
>emb|CR847802.11| Zebrafish DNA sequence from clone DKEY-48N1 in linkage group 18, complete sequence Length = 172545 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 79293 tcataagcattttattgatca 79273
>emb|CR759753.9| Zebrafish DNA sequence from clone DKEY-11G15 in linkage group 7, complete sequence Length = 203801 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 98643 tcataagcattttattgatca 98663
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tccggcgatcgacgcggcggc 85 ||||||||||||||||||||| Sbjct: 34481877 tccggcgatcgacgcggcggc 34481857
>gb|AC093834.3| Homo sapiens BAC clone RP11-423L1 from 4, complete sequence Length = 177582 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1538 gccacagaagacaaggaaagc 1558 ||||||||||||||||||||| Sbjct: 33168 gccacagaagacaaggaaagc 33188
>emb|CR361559.12| Zebrafish DNA sequence from clone DKEY-3P10 in linkage group 23, complete sequence Length = 246041 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 240524 tcataagcattttattgatca 240504
>emb|BX908389.7| Zebrafish DNA sequence from clone DKEY-98G7 in linkage group 14, complete sequence Length = 172795 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 3428 tcataagcattttattgatca 3448
>emb|BX784025.12| Zebrafish DNA sequence from clone DKEY-72L14 in linkage group 8, complete sequence Length = 257681 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 922 acttgaaaaagatgaagatga 942 ||||||||||||||||||||| Sbjct: 25163 acttgaaaaagatgaagatga 25183
>gb|AC016564.6| Homo sapiens chromosome 5 clone CTC-538E9, complete sequence Length = 132573 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1837 aggcaccttccaggcctccagctcc 1861 |||||||||||||||||||| |||| Sbjct: 24054 aggcaccttccaggcctccaactcc 24030
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ccggcgatcgacgcggcggcg 86 ||||||||||||||||||||| Sbjct: 955363 ccggcgatcgacgcggcggcg 955383
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tccggcgatcgacgcggcggc 85 ||||||||||||||||||||| Sbjct: 99362 tccggcgatcgacgcggcggc 99342
>emb|CR626922.13| Zebrafish DNA sequence from clone DKEY-33K14 in linkage group 18, complete sequence Length = 122627 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 106758 tcataagcattttattgatca 106778
>gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, region 36B-36B, BAC clone BACR27M18, complete sequence Length = 170362 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1254 tgaaatatgagatgagatctcataa 1278 |||||||||||||||| |||||||| Sbjct: 49248 tgaaatatgagatgagctctcataa 49224
>emb|CR392040.6| Zebrafish DNA sequence from clone DKEY-157H10 in linkage group 22, complete sequence Length = 108494 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 27779 tcataagcattttattgatca 27799
>emb|BX544881.7| Zebrafish DNA sequence from clone DKEY-64F15 in linkage group 14, complete sequence Length = 163842 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 12528 tcataagcattttattgatca 12548
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1688 gtgcaggagtttgaggctgaa 1708 ||||||||||||||||||||| Sbjct: 127433 gtgcaggagtttgaggctgaa 127413
>gb|BT004380.1| Arabidopsis thaliana clone U20243 unknown protein (At5g23570) mRNA, complete cds Length = 1909 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 941 gataagtggttaggcatgggcaaccaaga 969 ||||||||| | ||||||||||||||||| Sbjct: 958 gataagtggctcggcatgggcaaccaaga 986
>gb|BT002944.1| Arabidopsis thaliana clone RAFL14-93-K05 (R20243) unknown protein (At5g23570) mRNA, complete cds Length = 2162 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 941 gataagtggttaggcatgggcaaccaaga 969 ||||||||| | ||||||||||||||||| Sbjct: 1049 gataagtggctcggcatgggcaaccaaga 1077
>emb|BX649643.10| Zebrafish DNA sequence from clone CH211-125M10 in linkage group 22, complete sequence Length = 177325 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 155868 tcataagcattttattgatca 155848
>dbj|AK106615.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-H10, full insert sequence Length = 1897 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tccggcgatcgacgcggcggc 85 ||||||||||||||||||||| Sbjct: 73 tccggcgatcgacgcggcggc 93
>emb|BX005444.14| Zebrafish DNA sequence from clone CH211-119H23 in linkage group 2, complete sequence Length = 168979 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 6321 tcataagcattttattgatca 6301
>emb|BX004769.9| Zebrafish DNA sequence from clone DKEY-15I8 in linkage group 9, complete sequence Length = 154745 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 82492 tcataagcattttattgatca 82512
>emb|BX248129.5| Zebrafish DNA sequence from clone CH211-196M16 in linkage group 17, complete sequence Length = 217707 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 108724 tcataagcattttattgatca 108744
>emb|BX511034.11| Zebrafish DNA sequence from clone DKEY-57C15 in linkage group 22, complete sequence Length = 284624 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 138689 tcataagcattttattgatca 138709
>emb|BX537115.11| Zebrafish DNA sequence from clone CH211-207B20 in linkage group 14, complete sequence Length = 192331 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 6488 tcataagcattttattgatca 6508
>dbj|AP001831.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-317J19, complete sequence Length = 185919 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1884 agagcaatatctgagatttgc 1904 ||||||||||||||||||||| Sbjct: 14389 agagcaatatctgagatttgc 14369
>emb|BX537299.8| Mouse DNA sequence from clone RP23-412I17 on chromosome 7, complete sequence Length = 140968 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1730 catgaggagaagaaggtgcag 1750 ||||||||||||||||||||| Sbjct: 22629 catgaggagaagaaggtgcag 22649
>emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 in linkage group 5, complete sequence Length = 142918 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 9503 tcataagcattttattgatca 9523
>emb|BX072581.5| Zebrafish DNA sequence from clone DKEY-14K7 in linkage group 7, complete sequence Length = 239497 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tcataagcattttattgatca 1119 ||||||||||||||||||||| Sbjct: 138185 tcataagcattttattgatca 138205
>emb|AL844582.7| Mouse DNA sequence from clone RP23-234C7 on chromosome 2, complete sequence Length = 221723 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1503 agttcttccatgatcagattg 1523 ||||||||||||||||||||| Sbjct: 159162 agttcttccatgatcagattg 159142 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 391,660,014 Number of extensions: 22242810 Number of successful extensions: 139401 Number of sequences better than 10.0: 71 Number of HSP's gapped: 139374 Number of HSP's successfully gapped: 164 Length of query: 2110 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2087 Effective length of database: 18,503,978,556 Effective search space: 38617803246372 Effective search space used: 38617803246372 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
