ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf2o18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK069189:Os11g0616200 | 293 | 1e-79 | 2 | AK109540:Os12g0502700 | 31 | 1.8 | 3 | AK108852:Os01g0867700 | 30 | 3.9 | 4 | AK068179:Os05g0440300 | 30 | 3.9 | 5 | Os08g0260800:Os08g0260800 | 29 | 5.1 | 6 | Os02g0532800:Os02g0532800 | 29 | 5.1 | 7 | AK102786:Os05g0440100 | 29 | 5.1 | 8 | AK073094:Os05g0440100 | 29 | 5.1 | 9 | Os06g0149600:Os06g0149600 | 29 | 6.7 | 10 | AK105927: | 29 | 6.7 | 11 | Os09g0473900:Os09g0473900 | 28 | 8.8 | 12 | Os08g0248500:Os08g0248500 | 28 | 8.8 | 13 | Os04g0391000:Os04g0391000 | 28 | 8.8 | 14 | Os03g0741600:Os03g0741600 | 28 | 8.8 |
|---|
>AK069189:Os11g0616200 | Length = 206 Score = 293 bits (750), Expect = 1e-79 Identities = 144/203 (70%), Positives = 162/203 (79%) Frame = +1 Query: 19 MDIPLPGGGGEVSEDYSPAATVVPFNPPLPLLRAPVPSSSSASTDPMPVLAFRDXXXXXX 198 MD+PLPGG + SEDYSPAATVV F+PPLPLLRAPVPSS+ AS +P PVLAFRD Sbjct: 1 MDVPLPGGSVDQSEDYSPAATVVRFDPPLPLLRAPVPSSA-ASGEP-PVLAFRDAASWRA 58 Query: 199 XXXXXXXXLFSQCEAGARSGCSITATRKCKPPWWKGLFGGATTDYQERERCEEREMASCL 378 L SQCEAGARSGCSITA+RKCKPPWWKGL GGA TDYQERERCEEREMA+CL Sbjct: 59 AWEAAEASLLSQCEAGARSGCSITASRKCKPPWWKGLLGGAPTDYQERERCEEREMAACL 118 Query: 379 ESAKEACIKFSKQKCDAPFRDARIASEGLLENTNFDVWNAGCNKTASGPLSVANSHYSSN 558 E+A+EAC+KF+K+KC PFRDARIASEGLLENT F +W AG N+T+S L +ANS Y N Sbjct: 119 EAAREACVKFAKEKCIEPFRDARIASEGLLENTKFAIWGAGSNRTSSASLCIANSQYPFN 178 Query: 559 PALGGTNYKGSDLLDSLASQDNS 627 P G TNYKGSDLLDS S+DN+ Sbjct: 179 PRPGSTNYKGSDLLDSFPSEDNN 201
>AK109540:Os12g0502700 | Length = 607 Score = 30.8 bits (68), Expect = 1.8 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +1 Query: 619 DNSKSE*LMSDHRRQSGPCSGGGICS 696 D+ +S+ L SDH SGP GGG+ S Sbjct: 75 DSHRSQILFSDHHPSSGPGRGGGVAS 100
>AK108852:Os01g0867700 | Length = 272 Score = 29.6 bits (65), Expect = 3.9 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +1 Query: 67 SPAATVVPFNPPLPLLRAPVPSSSSASTDPMP 162 +P+ATV+P PP P RA +P S+S + P P Sbjct: 30 APSATVLPARPPSP-PRASIPVSTSPAPLPAP 60
>AK068179:Os05g0440300 | Length = 395 Score = 29.6 bits (65), Expect = 3.9 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Frame = +1 Query: 10 GNTMDIPLPGGGGEVSEDYSPAATVVP----FNPPLPLLRAPVPSSSSASTDP 156 G ++IPLP G G+ +Y+ VVP F P L + V S++ DP Sbjct: 249 GYNLNIPLPNGSGDAGYEYAMNELVVPAIEKFRPELMVF---VVGQDSSAFDP 298
>Os08g0260800:Os08g0260800 | Length = 852 Score = 29.3 bits (64), Expect = 5.1 Identities = 15/56 (26%), Positives = 29/56 (51%) Frame = +2 Query: 347 DAKNERWLLVLNQQRRHALSFQSKNVMHHSEMQGLPLKVSLKIPILMSGMLGVTKQ 514 D +N +WL+V Q+ Q +++ M+ +PL + +P+ G L +TK+ Sbjct: 772 DMRNLKWLVV---QKDAMKKLQRLTLVNLKNMRDVPLGIQFLMPLKYLGFLEITKE 824
>Os02g0532800:Os02g0532800 | Length = 195 Score = 29.3 bits (64), Expect = 5.1 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +1 Query: 37 GGGGEVSEDYSPAATVVPFNPPLPLLRAPVPSSSSASTD 153 GGGG + + AA + P LP+ R P PSS +A + Sbjct: 77 GGGGGAGDHHQQAALLAP----LPVSRRPAPSSVAAGEE 111
>AK102786:Os05g0440100 | Length = 392 Score = 29.3 bits (64), Expect = 5.1 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Frame = +1 Query: 10 GNTMDIPLPGGGGEVSEDYSPAATVVP----FNPPLPLLRAPVPSSSSASTDP 156 G ++IPLP G G+ +Y+ VVP F P L + V S++ DP Sbjct: 246 GYNLNIPLPNGSGDAGYEYAMNELVVPAIEKFRPELLVF---VVGQDSSTFDP 295
>AK073094:Os05g0440100 | Length = 392 Score = 29.3 bits (64), Expect = 5.1 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Frame = +1 Query: 10 GNTMDIPLPGGGGEVSEDYSPAATVVP----FNPPLPLLRAPVPSSSSASTDP 156 G ++IPLP G G+ +Y+ VVP F P L + V S++ DP Sbjct: 246 GYNLNIPLPNGSGDAGYEYAMNELVVPAIEKFRPELLVF---VVGQDSSTFDP 295
>Os06g0149600:Os06g0149600 | Length = 1600 Score = 28.9 bits (63), Expect = 6.7 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +1 Query: 40 GGGEVSEDYSPAATVVPFNPPLPLLRAP----VPSSSSASTDPMPV 165 G G V S +T P +PP P P ++SS+ST P PV Sbjct: 956 GAGGVGSSSSSVSTPAPESPPTPTPTHPRATTSTTTSSSSTPPQPV 1001
>AK105927: | Length = 463 Score = 28.9 bits (63), Expect = 6.7 Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 5/92 (5%) Frame = +1 Query: 46 GEVSEDYSPAATVVPFNPPLPLLRAPVPSSSSASTDPM-----PVLAFRDXXXXXXXXXX 210 G+ + D AA P P A PSS S+ST P P A Sbjct: 366 GKYTSDGEAAAATSRAPPTAPTRSATRPSSRSSSTCPRSSPSSPSSATTGCSTSTTPTPT 425 Query: 211 XXXXLFSQCEAGARSGCSITATRKCKPPWWKG 306 +G+ +G S T TR+C WW+G Sbjct: 426 RSSASPPSTTSGSCAG-SRTWTRRCTASWWRG 456
>Os09g0473900:Os09g0473900 | Length = 1685 Score = 28.5 bits (62), Expect = 8.8 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +1 Query: 37 GGGGEVSEDYSPAATVVPFNPPLPLLRAP----VPSSSSASTDPMPV 165 G GG S +T VP PP P P ++SS+ST P PV Sbjct: 956 GAGGVGSSSSPSVSTPVPEPPPTPTPTHPRATTSTTTSSSSTPPQPV 1002
>Os08g0248500:Os08g0248500 | Length = 1827 Score = 28.5 bits (62), Expect = 8.8 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +1 Query: 37 GGGGEVSEDYSPAATVVPFNPPLPLLRAP----VPSSSSASTDPMPV 165 G GG S +T VP PP P P ++SS+ST P PV Sbjct: 956 GAGGVGSSSSPSVSTPVPEPPPTPTPTHPRATTSTTTSSSSTPPQPV 1002
>Os04g0391000:Os04g0391000 | Length = 937 Score = 28.5 bits (62), Expect = 8.8 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +1 Query: 67 SPAATVVPFNPPLPLLRAPVPSSSSASTDPMP 162 +P T P PP+P+ AP+P+ + T P Sbjct: 275 TPTPTPTPTRPPVPVWAAPLPARTPTPTPSAP 306
>Os03g0741600:Os03g0741600 | Length = 368 Score = 28.5 bits (62), Expect = 8.8 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Frame = +1 Query: 28 PLPGGGGEVS-EDYSPAATVVPFNPPLPLLRAPVPSSSSASTDP 156 P G GG Y P + P PP P++ PVP + DP Sbjct: 101 PSSGAGGYAKIPTYPPPPSAYPAAPPPPVMGQPVPPPPAQLHDP 144 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,385,390 Number of extensions: 632968 Number of successful extensions: 3122 Number of sequences better than 10.0: 14 Number of HSP's gapped: 3103 Number of HSP's successfully gapped: 14 Length of query: 365 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 263 Effective length of database: 11,315,673 Effective search space: 2976021999 Effective search space used: 2976021999 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
