| Clone Name | FLbaf2n20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 176 bits (89), Expect = 3e-40 Identities = 212/253 (83%) Strand = Plus / Minus Query: 216 ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275 ||||||||||||||||||||| | | | |||||||| ||||||||||| |||||||| Sbjct: 23031447 ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 23031388 Query: 276 ggcctacgccggcgtgggctggaccgcggaggccatggagatcatgatgctgtccttcgt 335 ||||||||| ||||||| ||| |||||||||||||||| | ||| ||||||| ||||| Sbjct: 23031387 cgcctacgcctgcgtggggtgggtcgcggaggccatggaggtgatgctgctgtcgttcgt 23031328 Query: 336 cggcccgtccgtgaaggacgagtggggaatctcgggccagcaggaagggctcatcaccag 395 |||||||||||||||| || ||||| | || ||| | ||| |||||| ||| ||| Sbjct: 23031327 gggcccgtccgtgaaggctgaatggggggtgtccggcgcggcggaggggctcgtcagcag 23031268 Query: 396 cgtcgtcttcgccgggatgatcatcgggggctgcctcgggggcgtcatctcggactcata 455 ||||||||||||||||||| ||||||| | ||||||||| ||| ||||||||||| ||| Sbjct: 23031267 cgtcgtcttcgccgggatgctcatcggcgcctgcctcggaggcctcatctcggacagata 23031208 Query: 456 tggcagaaggtat 468 |||||||||||| Sbjct: 23031207 cggcagaaggtat 23031195 Score = 97.6 bits (49), Expect = 2e-16 Identities = 112/133 (84%) Strand = Plus / Minus Query: 1660 cctccgctttattgtcggtatgggattgggttctggtcatgttcttggtacttggttcct 1719 |||||||||| |||| ||| ||||||||||| |||| ||||| || ||||||||| | Sbjct: 23030495 cctccgctttgttgttggtttgggattgggtgctggccatgtgctgtccacttggttcat 23030436 Query: 1720 agagtttgttcctgctgcaaataggggtacttgggtggttgtcttccattgtacttggac 1779 ||||||||||||||||||||| || ||||| ||| |||| || |||||||| ||||||| Sbjct: 23030435 agagtttgttcctgctgcaaagagaggtacctggatggtcgttttccattgctcttggac 23030376 Query: 1780 tttcggaacaatc 1792 | | ||||||||| Sbjct: 23030375 tgtgggaacaatc 23030363 Score = 65.9 bits (33), Expect = 8e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 2345 gaatttcctggtctgattttggcggctctattggttgacaaggttggtcgcaaactgtca 2404 |||||||| |||||| |||||||||||||||||||||||| ||||||| ||| ||||| Sbjct: 23029003 gaatttccaggtctggttttggcggctctattggttgacagaattggtcggaaagtgtca 23028944 Query: 2405 atggg 2409 |||| Sbjct: 23028943 ctggg 23028939 Score = 56.0 bits (28), Expect = 7e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 2660 cagaaagaagctgtgtttgtcttcgatcttgtactctttcttgcagcaattgcctgtgcc 2719 ||||||||||| |||||| || | || || | |||||||| |||||| | || || ||| Sbjct: 23028038 cagaaagaagcagtgtttttcatggacctgatgctctttctagcagcagtggcatgcgcc 23027979 Query: 2720 ctcttccctctagagaccaagggc 2743 ||| |||||||||||||||||||| Sbjct: 23027978 ctcatccctctagagaccaagggc 23027955 Score = 56.0 bits (28), Expect = 7e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 2178 ttcttctttggtttgtctactttgcattttgttttgcttactatggcatagtattgctaa 2237 ||||||||||||||||||| ||||| || ||||||||||||||| || ||||| | | Sbjct: 23029777 ttcttctttggtttgtctatcttgcaaattattttgcttactatggggtaatattgttga 23029718 Query: 2238 catcggaactaagcaatggt 2257 | || ||||| ||||||||| Sbjct: 23029717 cctctgaactgagcaatggt 23029698 Score = 46.1 bits (23), Expect = 0.71 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1813 ggctatcatgccagtacttggatggaggtgg 1843 |||| |||||||||||||||| ||||||||| Sbjct: 23030139 ggctgtcatgccagtacttgggtggaggtgg 23030109
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 176 bits (89), Expect = 3e-40 Identities = 212/253 (83%) Strand = Plus / Minus Query: 216 ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275 ||||||||||||||||||||| | | | |||||||| ||||||||||| |||||||| Sbjct: 106661 ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 106602 Query: 276 ggcctacgccggcgtgggctggaccgcggaggccatggagatcatgatgctgtccttcgt 335 ||||||||| ||||||| ||| |||||||||||||||| | ||| ||||||| ||||| Sbjct: 106601 cgcctacgcctgcgtggggtgggtcgcggaggccatggaggtgatgctgctgtcgttcgt 106542 Query: 336 cggcccgtccgtgaaggacgagtggggaatctcgggccagcaggaagggctcatcaccag 395 |||||||||||||||| || ||||| | || ||| | ||| |||||| ||| ||| Sbjct: 106541 gggcccgtccgtgaaggctgaatggggggtgtccggcgcggcggaggggctcgtcagcag 106482 Query: 396 cgtcgtcttcgccgggatgatcatcgggggctgcctcgggggcgtcatctcggactcata 455 ||||||||||||||||||| ||||||| | ||||||||| ||| ||||||||||| ||| Sbjct: 106481 cgtcgtcttcgccgggatgctcatcggcgcctgcctcggaggcctcatctcggacagata 106422 Query: 456 tggcagaaggtat 468 |||||||||||| Sbjct: 106421 cggcagaaggtat 106409 Score = 97.6 bits (49), Expect = 2e-16 Identities = 112/133 (84%) Strand = Plus / Minus Query: 1660 cctccgctttattgtcggtatgggattgggttctggtcatgttcttggtacttggttcct 1719 |||||||||| |||| ||| ||||||||||| |||| ||||| || ||||||||| | Sbjct: 105709 cctccgctttgttgttggtttgggattgggtgctggccatgtgctgtccacttggttcat 105650 Query: 1720 agagtttgttcctgctgcaaataggggtacttgggtggttgtcttccattgtacttggac 1779 ||||||||||||||||||||| || ||||| ||| |||| || |||||||| ||||||| Sbjct: 105649 agagtttgttcctgctgcaaagagaggtacctggatggtcgttttccattgctcttggac 105590 Query: 1780 tttcggaacaatc 1792 | | ||||||||| Sbjct: 105589 tgtgggaacaatc 105577 Score = 65.9 bits (33), Expect = 8e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 2345 gaatttcctggtctgattttggcggctctattggttgacaaggttggtcgcaaactgtca 2404 |||||||| |||||| |||||||||||||||||||||||| ||||||| ||| ||||| Sbjct: 104217 gaatttccaggtctggttttggcggctctattggttgacagaattggtcggaaagtgtca 104158 Query: 2405 atggg 2409 |||| Sbjct: 104157 ctggg 104153 Score = 56.0 bits (28), Expect = 7e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 2660 cagaaagaagctgtgtttgtcttcgatcttgtactctttcttgcagcaattgcctgtgcc 2719 ||||||||||| |||||| || | || || | |||||||| |||||| | || || ||| Sbjct: 103252 cagaaagaagcagtgtttttcatggacctgatgctctttctagcagcagtggcatgcgcc 103193 Query: 2720 ctcttccctctagagaccaagggc 2743 ||| |||||||||||||||||||| Sbjct: 103192 ctcatccctctagagaccaagggc 103169 Score = 56.0 bits (28), Expect = 7e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 2178 ttcttctttggtttgtctactttgcattttgttttgcttactatggcatagtattgctaa 2237 ||||||||||||||||||| ||||| || ||||||||||||||| || ||||| | | Sbjct: 104991 ttcttctttggtttgtctatcttgcaaattattttgcttactatggggtaatattgttga 104932 Query: 2238 catcggaactaagcaatggt 2257 | || ||||| ||||||||| Sbjct: 104931 cctctgaactgagcaatggt 104912 Score = 46.1 bits (23), Expect = 0.71 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1813 ggctatcatgccagtacttggatggaggtgg 1843 |||| |||||||||||||||| ||||||||| Sbjct: 105353 ggctgtcatgccagtacttgggtggaggtgg 105323
>ref|NM_001066588.1| Oryza sativa (japonica cultivar-group) Os07g0571700 (Os07g0571700) mRNA, complete cds Length = 1836 Score = 170 bits (86), Expect = 2e-38 Identities = 209/250 (83%) Strand = Plus / Plus Query: 216 ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275 ||||||||||||||||||||| | | | |||||||| ||||||||||| |||||||| Sbjct: 103 ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 162 Query: 276 ggcctacgccggcgtgggctggaccgcggaggccatggagatcatgatgctgtccttcgt 335 ||||||||| ||||||| ||| |||||||||||||||| | ||| ||||||| ||||| Sbjct: 163 cgcctacgcctgcgtggggtgggtcgcggaggccatggaggtgatgctgctgtcgttcgt 222 Query: 336 cggcccgtccgtgaaggacgagtggggaatctcgggccagcaggaagggctcatcaccag 395 |||||||||||||||| || ||||| | || ||| | ||| |||||| ||| ||| Sbjct: 223 gggcccgtccgtgaaggctgaatggggggtgtccggcgcggcggaggggctcgtcagcag 282 Query: 396 cgtcgtcttcgccgggatgatcatcgggggctgcctcgggggcgtcatctcggactcata 455 ||||||||||||||||||| ||||||| | ||||||||| ||| ||||||||||| ||| Sbjct: 283 cgtcgtcttcgccgggatgctcatcggcgcctgcctcggaggcctcatctcggacagata 342 Query: 456 tggcagaagg 465 ||||||||| Sbjct: 343 cggcagaagg 352 Score = 127 bits (64), Expect = 2e-25 Identities = 154/184 (83%) Strand = Plus / Plus Query: 1660 cctccgctttattgtcggtatgggattgggttctggtcatgttcttggtacttggttcct 1719 |||||||||| |||| ||| ||||||||||| |||| ||||| || ||||||||| | Sbjct: 436 cctccgctttgttgttggtttgggattgggtgctggccatgtgctgtccacttggttcat 495 Query: 1720 agagtttgttcctgctgcaaataggggtacttgggtggttgtcttccattgtacttggac 1779 ||||||||||||||||||||| || ||||| ||| |||| || |||||||| ||||||| Sbjct: 496 agagtttgttcctgctgcaaagagaggtacctggatggtcgttttccattgctcttggac 555 Query: 1780 tttcggaacaatccttcaggctcttattgcatgggctatcatgccagtacttggatggag 1839 | | ||||||||| | | ||||| |||| |||||| |||||||||||||||| ||||| Sbjct: 556 tgtgggaacaatcttggaagctctgcttgcctgggctgtcatgccagtacttgggtggag 615 Query: 1840 gtgg 1843 |||| Sbjct: 616 gtgg 619 Score = 87.7 bits (44), Expect = 2e-13 Identities = 185/232 (79%) Strand = Plus / Plus Query: 2178 ttcttctttggtttgtctactttgcattttgttttgcttactatggcatagtattgctaa 2237 ||||||||||||||||||| ||||| || ||||||||||||||| || ||||| | | Sbjct: 951 ttcttctttggtttgtctatcttgcaaattattttgcttactatggggtaatattgttga 1010 Query: 2238 catcggaactaagcaatggtgcaaggagatgtggacctgttggtatgcatttctggcagc 2297 | || ||||| ||||||||| || || |||| | | ||||| || |||| ||| | Sbjct: 1011 cctctgaactgagcaatggtcagagaaggtgtgcatcagttgggataaattttatgcaac 1070 Query: 2298 aaaatgatgccagactctacagagatgtcctggtgacaagtattgcggaatttcctggtc 2357 ||| ||||||| || ||||||||||| || ||||| ||| | || |||||||| |||| Sbjct: 1071 caaaggatgccaacctttacagagatgtgctagtgaccagtttggcagaatttccaggtc 1130 Query: 2358 tgattttggcggctctattggttgacaaggttggtcgcaaactgtcaatggg 2409 || |||||||||||||||||||||||| ||||||| ||| ||||| |||| Sbjct: 1131 tggttttggcggctctattggttgacagaattggtcggaaagtgtcactggg 1182 Score = 56.0 bits (28), Expect = 7e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 2660 cagaaagaagctgtgtttgtcttcgatcttgtactctttcttgcagcaattgcctgtgcc 2719 ||||||||||| |||||| || | || || | |||||||| |||||| | || || ||| Sbjct: 1433 cagaaagaagcagtgtttttcatggacctgatgctctttctagcagcagtggcatgcgcc 1492 Query: 2720 ctcttccctctagagaccaagggc 2743 ||| |||||||||||||||||||| Sbjct: 1493 ctcatccctctagagaccaagggc 1516
>dbj|AK067178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098E20, full insert sequence Length = 1842 Score = 170 bits (86), Expect = 2e-38 Identities = 209/250 (83%) Strand = Plus / Plus Query: 216 ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275 ||||||||||||||||||||| | | | |||||||| ||||||||||| |||||||| Sbjct: 109 ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 168 Query: 276 ggcctacgccggcgtgggctggaccgcggaggccatggagatcatgatgctgtccttcgt 335 ||||||||| ||||||| ||| |||||||||||||||| | ||| ||||||| ||||| Sbjct: 169 cgcctacgcctgcgtggggtgggtcgcggaggccatggaggtgatgctgctgtcgttcgt 228 Query: 336 cggcccgtccgtgaaggacgagtggggaatctcgggccagcaggaagggctcatcaccag 395 |||||||||||||||| || ||||| | || ||| | ||| |||||| ||| ||| Sbjct: 229 gggcccgtccgtgaaggctgaatggggggtgtccggcgcggcggaggggctcgtcagcag 288 Query: 396 cgtcgtcttcgccgggatgatcatcgggggctgcctcgggggcgtcatctcggactcata 455 ||||||||||||||||||| ||||||| | ||||||||| ||| ||||||||||| ||| Sbjct: 289 cgtcgtcttcgccgggatgctcatcggcgcctgcctcggaggcctcatctcggacagata 348 Query: 456 tggcagaagg 465 ||||||||| Sbjct: 349 cggcagaagg 358 Score = 127 bits (64), Expect = 2e-25 Identities = 154/184 (83%) Strand = Plus / Plus Query: 1660 cctccgctttattgtcggtatgggattgggttctggtcatgttcttggtacttggttcct 1719 |||||||||| |||| ||| ||||||||||| |||| ||||| || ||||||||| | Sbjct: 442 cctccgctttgttgttggtttgggattgggtgctggccatgtgctgtccacttggttcat 501 Query: 1720 agagtttgttcctgctgcaaataggggtacttgggtggttgtcttccattgtacttggac 1779 ||||||||||||||||||||| || ||||| ||| |||| || |||||||| ||||||| Sbjct: 502 agagtttgttcctgctgcaaagagaggtacctggatggtcgttttccattgctcttggac 561 Query: 1780 tttcggaacaatccttcaggctcttattgcatgggctatcatgccagtacttggatggag 1839 | | ||||||||| | | ||||| |||| |||||| |||||||||||||||| ||||| Sbjct: 562 tgtgggaacaatcttggaagctctgcttgcctgggctgtcatgccagtacttgggtggag 621 Query: 1840 gtgg 1843 |||| Sbjct: 622 gtgg 625 Score = 87.7 bits (44), Expect = 2e-13 Identities = 185/232 (79%) Strand = Plus / Plus Query: 2178 ttcttctttggtttgtctactttgcattttgttttgcttactatggcatagtattgctaa 2237 ||||||||||||||||||| ||||| || ||||||||||||||| || ||||| | | Sbjct: 957 ttcttctttggtttgtctatcttgcaaattattttgcttactatggggtaatattgttga 1016 Query: 2238 catcggaactaagcaatggtgcaaggagatgtggacctgttggtatgcatttctggcagc 2297 | || ||||| ||||||||| || || |||| | | ||||| || |||| ||| | Sbjct: 1017 cctctgaactgagcaatggtcagagaaggtgtgcatcagttgggataaattttatgcaac 1076 Query: 2298 aaaatgatgccagactctacagagatgtcctggtgacaagtattgcggaatttcctggtc 2357 ||| ||||||| || ||||||||||| || ||||| ||| | || |||||||| |||| Sbjct: 1077 caaaggatgccaacctttacagagatgtgctagtgaccagtttggcagaatttccaggtc 1136 Query: 2358 tgattttggcggctctattggttgacaaggttggtcgcaaactgtcaatggg 2409 || |||||||||||||||||||||||| ||||||| ||| ||||| |||| Sbjct: 1137 tggttttggcggctctattggttgacagaattggtcggaaagtgtcactggg 1188 Score = 56.0 bits (28), Expect = 7e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 2660 cagaaagaagctgtgtttgtcttcgatcttgtactctttcttgcagcaattgcctgtgcc 2719 ||||||||||| |||||| || | || || | |||||||| |||||| | || || ||| Sbjct: 1439 cagaaagaagcagtgtttttcatggacctgatgctctttctagcagcagtggcatgcgcc 1498 Query: 2720 ctcttccctctagagaccaagggc 2743 ||| |||||||||||||||||||| Sbjct: 1499 ctcatccctctagagaccaagggc 1522
>gb|AY022935.1| Oryza sativa microsatellite MRG5260 containing (CTC)X9, closest to marker R2561, genomic sequence Length = 227 Score = 81.8 bits (41), Expect = 1e-11 Identities = 83/97 (85%) Strand = Plus / Minus Query: 216 ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275 ||||||||||||||||||||| | | | |||||||| ||||||||||| |||||||| Sbjct: 98 ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 39 Query: 276 ggcctacgccggcgtgggctggaccgcggaggccatg 312 ||||||||| ||||||| ||| ||||||||||||| Sbjct: 38 cgcctacgcctgcgtggggtgggtcgcggaggccatg 2
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 50.1 bits (25), Expect = 0.045 Identities = 59/69 (85%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 750 agctccaacacagcaccgatg-ctccggcgaagctccattacaactccggcggagcttca 808 |||||||||||| |||||||| | | || ||||||||||| || | ||||||||||| || Sbjct: 91322 agctccaacacatcaccgatggcgctggagaagctccattccagccccggcggagctcca 91381 Query: 809 acgcagcac 817 |||| |||| Sbjct: 91382 acgcggcac 91390
>gb|AC188599.3| Pan troglodytes BAC clone CH251-630C5 from chromosome 7, complete sequence Length = 197948 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1354 atgaagtaaactttaggggaata 1376 ||||||||||||||||||||||| Sbjct: 186919 atgaagtaaactttaggggaata 186897
>gb|AC004006.1| Homo sapiens PAC clone RP4-740B21 from 7, complete sequence Length = 119453 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1354 atgaagtaaactttaggggaata 1376 ||||||||||||||||||||||| Sbjct: 24448 atgaagtaaactttaggggaata 24426
>dbj|AP006336.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07E09, TM0293, complete sequence Length = 113091 Score = 46.1 bits (23), Expect = 0.71 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1710 cttggttcctagagtttgttcctgctgcaaataggggtacttgggtggttgtctt 1764 ||||||| || |||||||||||||| | ||||| ||||| ||| |||||||||| Sbjct: 39189 cttggtttcttgagtttgttcctgcccccaatagaggtacctggatggttgtctt 39135
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 46.1 bits (23), Expect = 0.71 Identities = 26/27 (96%) Strand = Plus / Plus Query: 265 gcgctggtgctggcctacgccggcgtg 291 |||||||||||||||||||| |||||| Sbjct: 2493297 gcgctggtgctggcctacgctggcgtg 2493323
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Minus Query: 97 ccggcgcggcggcgcttgcgccg 119 ||||||||||||||||||||||| Sbjct: 3302086 ccggcgcggcggcgcttgcgccg 3302064
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 46.1 bits (23), Expect = 0.71 Identities = 26/27 (96%) Strand = Plus / Minus Query: 265 gcgctggtgctggcctacgccggcgtg 291 |||||||||||||||||||| |||||| Sbjct: 1823753 gcgctggtgctggcctacgctggcgtg 1823727
>ref|XM_001105067.1| PREDICTED: Macaca mulatta similar to presenilin stabilization factor-like (LOC705718), mRNA Length = 4177 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1355 tgaagtaaactttaggggaata 1376 |||||||||||||||||||||| Sbjct: 2503 tgaagtaaactttaggggaata 2482
>dbj|AK057677.1| Homo sapiens cDNA FLJ33115 fis, clone TRACH2001314 Length = 2590 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1355 tgaagtaaactttaggggaata 1376 |||||||||||||||||||||| Sbjct: 932 tgaagtaaactttaggggaata 911
>gb|AC087525.6| Homo sapiens chromosome 15, clone RP11-321G12, complete sequence Length = 157590 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1355 tgaagtaaactttaggggaata 1376 |||||||||||||||||||||| Sbjct: 26900 tgaagtaaactttaggggaata 26879
>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence Length = 188117 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1583 tttctattcactgctgttgtca 1604 |||||||||||||||||||||| Sbjct: 10503 tttctattcactgctgttgtca 10524
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1549 tgttttaattttgttttccatc 1570 |||||||||||||||||||||| Sbjct: 10814051 tgttttaattttgttttccatc 10814072
>gb|AC016207.9| Homo sapiens, clone RP11-25H20, complete sequence Length = 169476 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1355 tgaagtaaactttaggggaata 1376 |||||||||||||||||||||| Sbjct: 15164 tgaagtaaactttaggggaata 15185
>gb|AC102941.9| Homo sapiens chromosome 15, clone RP11-300A12, complete sequence Length = 174941 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1583 tttctattcactgctgttgtca 1604 |||||||||||||||||||||| Sbjct: 160940 tttctattcactgctgttgtca 160961
>gb|AC138036.2| Homo sapiens chromosome 5 clone XXcos-B22C99, complete sequence Length = 42108 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2795 gcatacccatcagattaaatta 2816 |||||||||||||||||||||| Sbjct: 21802 gcatacccatcagattaaatta 21823
>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026A08 Length = 171272 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1549 tgttttaattttgttttccatc 1570 |||||||||||||||||||||| Sbjct: 27836 tgttttaattttgttttccatc 27857
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1549 tgttttaattttgttttccatc 1570 |||||||||||||||||||||| Sbjct: 111183 tgttttaattttgttttccatc 111204
>gb|AC021360.15| Homo sapiens chromosome 15, clone RP11-25D17, complete sequence Length = 147133 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1583 tttctattcactgctgttgtca 1604 |||||||||||||||||||||| Sbjct: 50789 tttctattcactgctgttgtca 50768
>gb|AC161468.2| Gallus gallus BAC clone CH261-94J19 from chromosome unknown, complete sequence Length = 238361 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 ccctcctcccccagccctccgc 75 |||||||||||||||||||||| Sbjct: 117406 ccctcctcccccagccctccgc 117385 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 491,886,007 Number of extensions: 26176984 Number of successful extensions: 142036 Number of sequences better than 10.0: 24 Number of HSP's gapped: 142031 Number of HSP's successfully gapped: 50 Length of query: 2876 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2853 Effective length of database: 18,503,978,556 Effective search space: 52791850820268 Effective search space used: 52791850820268 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)