ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf2n20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 176 3e-40
2dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 176 3e-40
3ref|NM_001066588.1| Oryza sativa (japonica cultivar-group) Os07g... 170 2e-38
4dbj|AK067178.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-38
5gb|AY022935.1| Oryza sativa microsatellite MRG5260 containing (C... 82 1e-11
6gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 4... 50 0.045
7gb|AC188599.3| Pan troglodytes BAC clone CH251-630C5 from chromo... 46 0.71
8gb|AC004006.1| Homo sapiens PAC clone RP4-740B21 from 7, complet... 46 0.71
9dbj|AP006336.1| Lotus japonicus genomic DNA, chromosome 3, clone... 46 0.71
10dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 46 0.71
11gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 46 0.71
12gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 46 0.71
13ref|XM_001105067.1| PREDICTED: Macaca mulatta similar to preseni... 44 2.8
14dbj|AK057677.1| Homo sapiens cDNA FLJ33115 fis, clone TRACH2001314 44 2.8
15gb|AC087525.6| Homo sapiens chromosome 15, clone RP11-321G12, co... 44 2.8
16gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, co... 44 2.8
17dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.8
18gb|AC016207.9| Homo sapiens, clone RP11-25H20, complete sequence 44 2.8
19gb|AC102941.9| Homo sapiens chromosome 15, clone RP11-300A12, co... 44 2.8
20gb|AC138036.2| Homo sapiens chromosome 5 clone XXcos-B22C99, com... 44 2.8
21dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic D... 44 2.8
22dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic D... 44 2.8
23gb|AC021360.15| Homo sapiens chromosome 15, clone RP11-25D17, co... 44 2.8
24gb|AC161468.2| Gallus gallus BAC clone CH261-94J19 from chromoso... 44 2.8

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043
 Score =  176 bits (89), Expect = 3e-40
 Identities = 212/253 (83%)
 Strand = Plus / Minus

                                                                            
Query: 216      ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275
                |||||||||||||||||||||  | |  |  |||||||| ||||||||||| ||||||||
Sbjct: 23031447 ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 23031388

                                                                            
Query: 276      ggcctacgccggcgtgggctggaccgcggaggccatggagatcatgatgctgtccttcgt 335
                 ||||||||| ||||||| |||  |||||||||||||||| | ||| ||||||| |||||
Sbjct: 23031387 cgcctacgcctgcgtggggtgggtcgcggaggccatggaggtgatgctgctgtcgttcgt 23031328

                                                                            
Query: 336      cggcccgtccgtgaaggacgagtggggaatctcgggccagcaggaagggctcatcaccag 395
                 ||||||||||||||||  || |||||  | || |||  |  ||| |||||| ||| |||
Sbjct: 23031327 gggcccgtccgtgaaggctgaatggggggtgtccggcgcggcggaggggctcgtcagcag 23031268

                                                                            
Query: 396      cgtcgtcttcgccgggatgatcatcgggggctgcctcgggggcgtcatctcggactcata 455
                ||||||||||||||||||| ||||||| | ||||||||| ||| |||||||||||  |||
Sbjct: 23031267 cgtcgtcttcgccgggatgctcatcggcgcctgcctcggaggcctcatctcggacagata 23031208

                             
Query: 456      tggcagaaggtat 468
                 ||||||||||||
Sbjct: 23031207 cggcagaaggtat 23031195



 Score = 97.6 bits (49), Expect = 2e-16
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1660     cctccgctttattgtcggtatgggattgggttctggtcatgttcttggtacttggttcct 1719
                |||||||||| |||| ||| ||||||||||| |||| ||||| ||    ||||||||| |
Sbjct: 23030495 cctccgctttgttgttggtttgggattgggtgctggccatgtgctgtccacttggttcat 23030436

                                                                            
Query: 1720     agagtttgttcctgctgcaaataggggtacttgggtggttgtcttccattgtacttggac 1779
                ||||||||||||||||||||| || ||||| ||| |||| || ||||||||  |||||||
Sbjct: 23030435 agagtttgttcctgctgcaaagagaggtacctggatggtcgttttccattgctcttggac 23030376

                             
Query: 1780     tttcggaacaatc 1792
                | | |||||||||
Sbjct: 23030375 tgtgggaacaatc 23030363



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                            
Query: 2345     gaatttcctggtctgattttggcggctctattggttgacaaggttggtcgcaaactgtca 2404
                |||||||| |||||| ||||||||||||||||||||||||   ||||||| ||| |||||
Sbjct: 23029003 gaatttccaggtctggttttggcggctctattggttgacagaattggtcggaaagtgtca 23028944

                     
Query: 2405     atggg 2409
                 ||||
Sbjct: 23028943 ctggg 23028939



 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                            
Query: 2660     cagaaagaagctgtgtttgtcttcgatcttgtactctttcttgcagcaattgcctgtgcc 2719
                ||||||||||| |||||| || | || ||  | |||||||| |||||| | || || |||
Sbjct: 23028038 cagaaagaagcagtgtttttcatggacctgatgctctttctagcagcagtggcatgcgcc 23027979

                                        
Query: 2720     ctcttccctctagagaccaagggc 2743
                ||| ||||||||||||||||||||
Sbjct: 23027978 ctcatccctctagagaccaagggc 23027955



 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                            
Query: 2178     ttcttctttggtttgtctactttgcattttgttttgcttactatggcatagtattgctaa 2237
                |||||||||||||||||||  |||||  || |||||||||||||||  || ||||| | |
Sbjct: 23029777 ttcttctttggtttgtctatcttgcaaattattttgcttactatggggtaatattgttga 23029718

                                    
Query: 2238     catcggaactaagcaatggt 2257
                | || ||||| |||||||||
Sbjct: 23029717 cctctgaactgagcaatggt 23029698



 Score = 46.1 bits (23), Expect = 0.71
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 1813     ggctatcatgccagtacttggatggaggtgg 1843
                |||| |||||||||||||||| |||||||||
Sbjct: 23030139 ggctgtcatgccagtacttgggtggaggtgg 23030109



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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score =  176 bits (89), Expect = 3e-40
 Identities = 212/253 (83%)
 Strand = Plus / Minus

                                                                          
Query: 216    ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275
              |||||||||||||||||||||  | |  |  |||||||| ||||||||||| ||||||||
Sbjct: 106661 ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 106602

                                                                          
Query: 276    ggcctacgccggcgtgggctggaccgcggaggccatggagatcatgatgctgtccttcgt 335
               ||||||||| ||||||| |||  |||||||||||||||| | ||| ||||||| |||||
Sbjct: 106601 cgcctacgcctgcgtggggtgggtcgcggaggccatggaggtgatgctgctgtcgttcgt 106542

                                                                          
Query: 336    cggcccgtccgtgaaggacgagtggggaatctcgggccagcaggaagggctcatcaccag 395
               ||||||||||||||||  || |||||  | || |||  |  ||| |||||| ||| |||
Sbjct: 106541 gggcccgtccgtgaaggctgaatggggggtgtccggcgcggcggaggggctcgtcagcag 106482

                                                                          
Query: 396    cgtcgtcttcgccgggatgatcatcgggggctgcctcgggggcgtcatctcggactcata 455
              ||||||||||||||||||| ||||||| | ||||||||| ||| |||||||||||  |||
Sbjct: 106481 cgtcgtcttcgccgggatgctcatcggcgcctgcctcggaggcctcatctcggacagata 106422

                           
Query: 456    tggcagaaggtat 468
               ||||||||||||
Sbjct: 106421 cggcagaaggtat 106409



 Score = 97.6 bits (49), Expect = 2e-16
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                          
Query: 1660   cctccgctttattgtcggtatgggattgggttctggtcatgttcttggtacttggttcct 1719
              |||||||||| |||| ||| ||||||||||| |||| ||||| ||    ||||||||| |
Sbjct: 105709 cctccgctttgttgttggtttgggattgggtgctggccatgtgctgtccacttggttcat 105650

                                                                          
Query: 1720   agagtttgttcctgctgcaaataggggtacttgggtggttgtcttccattgtacttggac 1779
              ||||||||||||||||||||| || ||||| ||| |||| || ||||||||  |||||||
Sbjct: 105649 agagtttgttcctgctgcaaagagaggtacctggatggtcgttttccattgctcttggac 105590

                           
Query: 1780   tttcggaacaatc 1792
              | | |||||||||
Sbjct: 105589 tgtgggaacaatc 105577



 Score = 65.9 bits (33), Expect = 8e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 2345   gaatttcctggtctgattttggcggctctattggttgacaaggttggtcgcaaactgtca 2404
              |||||||| |||||| ||||||||||||||||||||||||   ||||||| ||| |||||
Sbjct: 104217 gaatttccaggtctggttttggcggctctattggttgacagaattggtcggaaagtgtca 104158

                   
Query: 2405   atggg 2409
               ||||
Sbjct: 104157 ctggg 104153



 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                          
Query: 2660   cagaaagaagctgtgtttgtcttcgatcttgtactctttcttgcagcaattgcctgtgcc 2719
              ||||||||||| |||||| || | || ||  | |||||||| |||||| | || || |||
Sbjct: 103252 cagaaagaagcagtgtttttcatggacctgatgctctttctagcagcagtggcatgcgcc 103193

                                      
Query: 2720   ctcttccctctagagaccaagggc 2743
              ||| ||||||||||||||||||||
Sbjct: 103192 ctcatccctctagagaccaagggc 103169



 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                          
Query: 2178   ttcttctttggtttgtctactttgcattttgttttgcttactatggcatagtattgctaa 2237
              |||||||||||||||||||  |||||  || |||||||||||||||  || ||||| | |
Sbjct: 104991 ttcttctttggtttgtctatcttgcaaattattttgcttactatggggtaatattgttga 104932

                                  
Query: 2238   catcggaactaagcaatggt 2257
              | || ||||| |||||||||
Sbjct: 104931 cctctgaactgagcaatggt 104912



 Score = 46.1 bits (23), Expect = 0.71
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 1813   ggctatcatgccagtacttggatggaggtgg 1843
              |||| |||||||||||||||| |||||||||
Sbjct: 105353 ggctgtcatgccagtacttgggtggaggtgg 105323



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>ref|NM_001066588.1| Oryza sativa (japonica cultivar-group) Os07g0571700 (Os07g0571700)
           mRNA, complete cds
          Length = 1836

 Score =  170 bits (86), Expect = 2e-38
 Identities = 209/250 (83%)
 Strand = Plus / Plus

                                                                       
Query: 216 ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275
           |||||||||||||||||||||  | |  |  |||||||| ||||||||||| ||||||||
Sbjct: 103 ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 162

                                                                       
Query: 276 ggcctacgccggcgtgggctggaccgcggaggccatggagatcatgatgctgtccttcgt 335
            ||||||||| ||||||| |||  |||||||||||||||| | ||| ||||||| |||||
Sbjct: 163 cgcctacgcctgcgtggggtgggtcgcggaggccatggaggtgatgctgctgtcgttcgt 222

                                                                       
Query: 336 cggcccgtccgtgaaggacgagtggggaatctcgggccagcaggaagggctcatcaccag 395
            ||||||||||||||||  || |||||  | || |||  |  ||| |||||| ||| |||
Sbjct: 223 gggcccgtccgtgaaggctgaatggggggtgtccggcgcggcggaggggctcgtcagcag 282

                                                                       
Query: 396 cgtcgtcttcgccgggatgatcatcgggggctgcctcgggggcgtcatctcggactcata 455
           ||||||||||||||||||| ||||||| | ||||||||| ||| |||||||||||  |||
Sbjct: 283 cgtcgtcttcgccgggatgctcatcggcgcctgcctcggaggcctcatctcggacagata 342

                     
Query: 456 tggcagaagg 465
            |||||||||
Sbjct: 343 cggcagaagg 352



 Score =  127 bits (64), Expect = 2e-25
 Identities = 154/184 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1660 cctccgctttattgtcggtatgggattgggttctggtcatgttcttggtacttggttcct 1719
            |||||||||| |||| ||| ||||||||||| |||| ||||| ||    ||||||||| |
Sbjct: 436  cctccgctttgttgttggtttgggattgggtgctggccatgtgctgtccacttggttcat 495

                                                                        
Query: 1720 agagtttgttcctgctgcaaataggggtacttgggtggttgtcttccattgtacttggac 1779
            ||||||||||||||||||||| || ||||| ||| |||| || ||||||||  |||||||
Sbjct: 496  agagtttgttcctgctgcaaagagaggtacctggatggtcgttttccattgctcttggac 555

                                                                        
Query: 1780 tttcggaacaatccttcaggctcttattgcatgggctatcatgccagtacttggatggag 1839
            | | ||||||||| |  | |||||  |||| |||||| |||||||||||||||| |||||
Sbjct: 556  tgtgggaacaatcttggaagctctgcttgcctgggctgtcatgccagtacttgggtggag 615

                
Query: 1840 gtgg 1843
            ||||
Sbjct: 616  gtgg 619



 Score = 87.7 bits (44), Expect = 2e-13
 Identities = 185/232 (79%)
 Strand = Plus / Plus

                                                                        
Query: 2178 ttcttctttggtttgtctactttgcattttgttttgcttactatggcatagtattgctaa 2237
            |||||||||||||||||||  |||||  || |||||||||||||||  || ||||| | |
Sbjct: 951  ttcttctttggtttgtctatcttgcaaattattttgcttactatggggtaatattgttga 1010

                                                                        
Query: 2238 catcggaactaagcaatggtgcaaggagatgtggacctgttggtatgcatttctggcagc 2297
            | || ||||| |||||||||   || || |||| | | ||||| ||  ||||   ||| |
Sbjct: 1011 cctctgaactgagcaatggtcagagaaggtgtgcatcagttgggataaattttatgcaac 1070

                                                                        
Query: 2298 aaaatgatgccagactctacagagatgtcctggtgacaagtattgcggaatttcctggtc 2357
             ||| |||||||  || ||||||||||| || ||||| ||| | || |||||||| ||||
Sbjct: 1071 caaaggatgccaacctttacagagatgtgctagtgaccagtttggcagaatttccaggtc 1130

                                                                
Query: 2358 tgattttggcggctctattggttgacaaggttggtcgcaaactgtcaatggg 2409
            || ||||||||||||||||||||||||   ||||||| ||| ||||| ||||
Sbjct: 1131 tggttttggcggctctattggttgacagaattggtcggaaagtgtcactggg 1182



 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2660 cagaaagaagctgtgtttgtcttcgatcttgtactctttcttgcagcaattgcctgtgcc 2719
            ||||||||||| |||||| || | || ||  | |||||||| |||||| | || || |||
Sbjct: 1433 cagaaagaagcagtgtttttcatggacctgatgctctttctagcagcagtggcatgcgcc 1492

                                    
Query: 2720 ctcttccctctagagaccaagggc 2743
            ||| ||||||||||||||||||||
Sbjct: 1493 ctcatccctctagagaccaagggc 1516



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>dbj|AK067178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098E20, full
           insert sequence
          Length = 1842

 Score =  170 bits (86), Expect = 2e-38
 Identities = 209/250 (83%)
 Strand = Plus / Plus

                                                                       
Query: 216 ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275
           |||||||||||||||||||||  | |  |  |||||||| ||||||||||| ||||||||
Sbjct: 109 ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 168

                                                                       
Query: 276 ggcctacgccggcgtgggctggaccgcggaggccatggagatcatgatgctgtccttcgt 335
            ||||||||| ||||||| |||  |||||||||||||||| | ||| ||||||| |||||
Sbjct: 169 cgcctacgcctgcgtggggtgggtcgcggaggccatggaggtgatgctgctgtcgttcgt 228

                                                                       
Query: 336 cggcccgtccgtgaaggacgagtggggaatctcgggccagcaggaagggctcatcaccag 395
            ||||||||||||||||  || |||||  | || |||  |  ||| |||||| ||| |||
Sbjct: 229 gggcccgtccgtgaaggctgaatggggggtgtccggcgcggcggaggggctcgtcagcag 288

                                                                       
Query: 396 cgtcgtcttcgccgggatgatcatcgggggctgcctcgggggcgtcatctcggactcata 455
           ||||||||||||||||||| ||||||| | ||||||||| ||| |||||||||||  |||
Sbjct: 289 cgtcgtcttcgccgggatgctcatcggcgcctgcctcggaggcctcatctcggacagata 348

                     
Query: 456 tggcagaagg 465
            |||||||||
Sbjct: 349 cggcagaagg 358



 Score =  127 bits (64), Expect = 2e-25
 Identities = 154/184 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1660 cctccgctttattgtcggtatgggattgggttctggtcatgttcttggtacttggttcct 1719
            |||||||||| |||| ||| ||||||||||| |||| ||||| ||    ||||||||| |
Sbjct: 442  cctccgctttgttgttggtttgggattgggtgctggccatgtgctgtccacttggttcat 501

                                                                        
Query: 1720 agagtttgttcctgctgcaaataggggtacttgggtggttgtcttccattgtacttggac 1779
            ||||||||||||||||||||| || ||||| ||| |||| || ||||||||  |||||||
Sbjct: 502  agagtttgttcctgctgcaaagagaggtacctggatggtcgttttccattgctcttggac 561

                                                                        
Query: 1780 tttcggaacaatccttcaggctcttattgcatgggctatcatgccagtacttggatggag 1839
            | | ||||||||| |  | |||||  |||| |||||| |||||||||||||||| |||||
Sbjct: 562  tgtgggaacaatcttggaagctctgcttgcctgggctgtcatgccagtacttgggtggag 621

                
Query: 1840 gtgg 1843
            ||||
Sbjct: 622  gtgg 625



 Score = 87.7 bits (44), Expect = 2e-13
 Identities = 185/232 (79%)
 Strand = Plus / Plus

                                                                        
Query: 2178 ttcttctttggtttgtctactttgcattttgttttgcttactatggcatagtattgctaa 2237
            |||||||||||||||||||  |||||  || |||||||||||||||  || ||||| | |
Sbjct: 957  ttcttctttggtttgtctatcttgcaaattattttgcttactatggggtaatattgttga 1016

                                                                        
Query: 2238 catcggaactaagcaatggtgcaaggagatgtggacctgttggtatgcatttctggcagc 2297
            | || ||||| |||||||||   || || |||| | | ||||| ||  ||||   ||| |
Sbjct: 1017 cctctgaactgagcaatggtcagagaaggtgtgcatcagttgggataaattttatgcaac 1076

                                                                        
Query: 2298 aaaatgatgccagactctacagagatgtcctggtgacaagtattgcggaatttcctggtc 2357
             ||| |||||||  || ||||||||||| || ||||| ||| | || |||||||| ||||
Sbjct: 1077 caaaggatgccaacctttacagagatgtgctagtgaccagtttggcagaatttccaggtc 1136

                                                                
Query: 2358 tgattttggcggctctattggttgacaaggttggtcgcaaactgtcaatggg 2409
            || ||||||||||||||||||||||||   ||||||| ||| ||||| ||||
Sbjct: 1137 tggttttggcggctctattggttgacagaattggtcggaaagtgtcactggg 1188



 Score = 56.0 bits (28), Expect = 7e-04
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2660 cagaaagaagctgtgtttgtcttcgatcttgtactctttcttgcagcaattgcctgtgcc 2719
            ||||||||||| |||||| || | || ||  | |||||||| |||||| | || || |||
Sbjct: 1439 cagaaagaagcagtgtttttcatggacctgatgctctttctagcagcagtggcatgcgcc 1498

                                    
Query: 2720 ctcttccctctagagaccaagggc 2743
            ||| ||||||||||||||||||||
Sbjct: 1499 ctcatccctctagagaccaagggc 1522



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>gb|AY022935.1| Oryza sativa microsatellite MRG5260 containing (CTC)X9, closest to
           marker R2561, genomic sequence
          Length = 227

 Score = 81.8 bits (41), Expect = 1e-11
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                       
Query: 216 ctacacgacggacgacgcgctgtcccaggtgggcttcgggaggttccaggcgctggtgct 275
           |||||||||||||||||||||  | |  |  |||||||| ||||||||||| ||||||||
Sbjct: 98  ctacacgacggacgacgcgctcacgcgcgccggcttcggcaggttccaggccctggtgct 39

                                                
Query: 276 ggcctacgccggcgtgggctggaccgcggaggccatg 312
            ||||||||| ||||||| |||  |||||||||||||
Sbjct: 38  cgcctacgcctgcgtggggtgggtcgcggaggccatg 2



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>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17,
             complete sequence
          Length = 245486

 Score = 50.1 bits (25), Expect = 0.045
 Identities = 59/69 (85%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                         
Query: 750   agctccaacacagcaccgatg-ctccggcgaagctccattacaactccggcggagcttca 808
             |||||||||||| |||||||| | | || ||||||||||| || | ||||||||||| ||
Sbjct: 91322 agctccaacacatcaccgatggcgctggagaagctccattccagccccggcggagctcca 91381

                      
Query: 809   acgcagcac 817
             |||| ||||
Sbjct: 91382 acgcggcac 91390



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>gb|AC188599.3| Pan troglodytes BAC clone CH251-630C5 from chromosome 7, complete
              sequence
          Length = 197948

 Score = 46.1 bits (23), Expect = 0.71
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 1354   atgaagtaaactttaggggaata 1376
              |||||||||||||||||||||||
Sbjct: 186919 atgaagtaaactttaggggaata 186897



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>gb|AC004006.1| Homo sapiens PAC clone RP4-740B21 from 7, complete sequence
          Length = 119453

 Score = 46.1 bits (23), Expect = 0.71
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 1354  atgaagtaaactttaggggaata 1376
             |||||||||||||||||||||||
Sbjct: 24448 atgaagtaaactttaggggaata 24426



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>dbj|AP006336.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07E09, TM0293,
             complete sequence
          Length = 113091

 Score = 46.1 bits (23), Expect = 0.71
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 1710  cttggttcctagagtttgttcctgctgcaaataggggtacttgggtggttgtctt 1764
             ||||||| || ||||||||||||||  | ||||| ||||| ||| ||||||||||
Sbjct: 39189 cttggtttcttgagtttgttcctgcccccaatagaggtacctggatggttgtctt 39135



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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 46.1 bits (23), Expect = 0.71
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 265     gcgctggtgctggcctacgccggcgtg 291
               |||||||||||||||||||| ||||||
Sbjct: 2493297 gcgctggtgctggcctacgctggcgtg 2493323



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 46.1 bits (23), Expect = 0.71
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 97      ccggcgcggcggcgcttgcgccg 119
               |||||||||||||||||||||||
Sbjct: 3302086 ccggcgcggcggcgcttgcgccg 3302064



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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 46.1 bits (23), Expect = 0.71
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 265     gcgctggtgctggcctacgccggcgtg 291
               |||||||||||||||||||| ||||||
Sbjct: 1823753 gcgctggtgctggcctacgctggcgtg 1823727



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>ref|XM_001105067.1| PREDICTED: Macaca mulatta similar to presenilin stabilization
            factor-like (LOC705718), mRNA
          Length = 4177

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1355 tgaagtaaactttaggggaata 1376
            ||||||||||||||||||||||
Sbjct: 2503 tgaagtaaactttaggggaata 2482



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>dbj|AK057677.1| Homo sapiens cDNA FLJ33115 fis, clone TRACH2001314
          Length = 2590

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1355 tgaagtaaactttaggggaata 1376
            ||||||||||||||||||||||
Sbjct: 932  tgaagtaaactttaggggaata 911



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>gb|AC087525.6| Homo sapiens chromosome 15, clone RP11-321G12, complete sequence
          Length = 157590

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1355  tgaagtaaactttaggggaata 1376
             ||||||||||||||||||||||
Sbjct: 26900 tgaagtaaactttaggggaata 26879



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>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence
          Length = 188117

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1583  tttctattcactgctgttgtca 1604
             ||||||||||||||||||||||
Sbjct: 10503 tttctattcactgctgttgtca 10524



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1549     tgttttaattttgttttccatc 1570
                ||||||||||||||||||||||
Sbjct: 10814051 tgttttaattttgttttccatc 10814072



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>gb|AC016207.9| Homo sapiens, clone RP11-25H20, complete sequence
          Length = 169476

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1355  tgaagtaaactttaggggaata 1376
             ||||||||||||||||||||||
Sbjct: 15164 tgaagtaaactttaggggaata 15185



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>gb|AC102941.9| Homo sapiens chromosome 15, clone RP11-300A12, complete sequence
          Length = 174941

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1583   tttctattcactgctgttgtca 1604
              ||||||||||||||||||||||
Sbjct: 160940 tttctattcactgctgttgtca 160961



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>gb|AC138036.2| Homo sapiens chromosome 5 clone XXcos-B22C99, complete sequence
          Length = 42108

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2795  gcatacccatcagattaaatta 2816
             ||||||||||||||||||||||
Sbjct: 21802 gcatacccatcagattaaatta 21823



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>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0026A08
          Length = 171272

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1549  tgttttaattttgttttccatc 1570
             ||||||||||||||||||||||
Sbjct: 27836 tgttttaattttgttttccatc 27857



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>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091M20
          Length = 132976

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1549   tgttttaattttgttttccatc 1570
              ||||||||||||||||||||||
Sbjct: 111183 tgttttaattttgttttccatc 111204



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>gb|AC021360.15| Homo sapiens chromosome 15, clone RP11-25D17, complete sequence
          Length = 147133

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1583  tttctattcactgctgttgtca 1604
             ||||||||||||||||||||||
Sbjct: 50789 tttctattcactgctgttgtca 50768



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>gb|AC161468.2| Gallus gallus BAC clone CH261-94J19 from chromosome unknown, complete
              sequence
          Length = 238361

 Score = 44.1 bits (22), Expect = 2.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 54     ccctcctcccccagccctccgc 75
              ||||||||||||||||||||||
Sbjct: 117406 ccctcctcccccagccctccgc 117385


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 491,886,007
Number of extensions: 26176984
Number of successful extensions: 142036
Number of sequences better than 10.0: 24
Number of HSP's gapped: 142031
Number of HSP's successfully gapped: 50
Length of query: 2876
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2853
Effective length of database: 18,503,978,556
Effective search space: 52791850820268
Effective search space used: 52791850820268
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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