ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5h24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101526:Os02g0832800 | 788 | 0.0 | 2 | AJ457976:Os02g0832800 | 788 | 0.0 | 3 | AK058826:Os02g0832800 | 493 | e-139 | 4 | AK100501: | 31 | 3.3 | 5 | U07339:Os05g0469600 | 31 | 3.3 | 6 | AK101272:Os05g0469600 | 31 | 3.3 | 7 | AK100678:Os05g0469600 | 31 | 3.3 | 8 | AK069905:Os01g0160100 | 30 | 4.3 | 9 | AK111923:Os01g0635400 | 30 | 5.6 | 10 | AK102655:Os01g0635400 | 30 | 5.6 | 11 | Os10g0363700:Os10g0363700 | 29 | 9.5 | 12 | AK105750:Os01g0208400 | 29 | 9.5 | 13 | AK060509:Os09g0509100 | 29 | 9.5 |
|---|
>AK101526:Os02g0832800 | Length = 442 Score = 788 bits (2035), Expect = 0.0 Identities = 387/445 (86%), Positives = 414/445 (93%), Gaps = 4/445 (0%) Frame = +3 Query: 36 MARNPCDIRILLVAAAVAFIYIQVRLFSTQSSNSHDAGRLAEAEK----CESQLHAMIDQ 203 MAR+PCD+RILLVAAA AFIYIQVRLFSTQS H A RLA+AEK C SQL ++IDQ Sbjct: 1 MARSPCDLRILLVAAAAAFIYIQVRLFSTQS---HYADRLAQAEKSENQCTSQLRSLIDQ 57 Query: 204 VSAQQEKIAALEEMKVRQDEERVQLKILIQDLEKRSLQTLIDKNVVPVAAVVIMACNRPD 383 VS+QQEKI ALEEMK+RQDEERV LKILIQDLEKRS+QTL++ NV PVAAVV+MACNRPD Sbjct: 58 VSSQQEKIVALEEMKIRQDEERVHLKILIQDLEKRSVQTLVNNNVAPVAAVVVMACNRPD 117 Query: 384 YLQRTVESILKYQKAVASKFPLFISQDGTNGEVKKKALSYNQITFMQHVDLEPVRTERPG 563 YLQRTVESILKYQ +VASKFPLFISQDG NGEVKKKALSYN+IT+MQH+DLEPVRTERPG Sbjct: 118 YLQRTVESILKYQTSVASKFPLFISQDGINGEVKKKALSYNEITYMQHLDLEPVRTERPG 177 Query: 564 ENVAYYKIANHYKWALDELFIKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDSDKSIMA 743 E +AYYKIA HYKWALDELFIKH+F RVIILEDDMEIAPDFFDYFEAAAKLLD+DK+IMA Sbjct: 178 ELIAYYKIAKHYKWALDELFIKHNFARVIILEDDMEIAPDFFDYFEAAAKLLDNDKTIMA 237 Query: 744 VSSWNDNGQKQFVYDPKALYRSDFFPGLGWMLTKSTWMELSPKWPKAYWDDWVRLKEVHR 923 VSSWNDNGQKQFVYDPKALYRSDFFPGLGWMLTK TW+ELSPKWPKAYWDDWVRLKEVHR Sbjct: 238 VSSWNDNGQKQFVYDPKALYRSDFFPGLGWMLTKPTWIELSPKWPKAYWDDWVRLKEVHR 297 Query: 924 DRQFIRPEVCRTYNFGEHGSSMGQFFDQYLKPIKLNDAHIDWNSEDLSYLKEDKFLTKFG 1103 DRQFIRPEVCRTYNFGEHGSSMGQFF QYL+PIKLNDAHI WNSEDLSYLKEDKFL +FG Sbjct: 298 DRQFIRPEVCRTYNFGEHGSSMGQFFRQYLEPIKLNDAHIKWNSEDLSYLKEDKFLIQFG 357 Query: 1104 KDVASATPVHGSDALLKAHNLDVDVRIQYDNQGDFERIARQFGIFEEWKDGVPRAAYKGV 1283 KDVASATP+HGSDA LKAHN+D DVRIQY++Q DFERIARQFGIFEEWKDG+PR AYKGV Sbjct: 358 KDVASATPLHGSDAALKAHNMDADVRIQYNDQEDFERIARQFGIFEEWKDGIPRTAYKGV 417 Query: 1284 VVFRYKSSRRRIYLVGPDSLRQLGV 1358 VVFRYKSSRRRIYLVGPDSL QL V Sbjct: 418 VVFRYKSSRRRIYLVGPDSLSQLRV 442
>AJ457976:Os02g0832800 | Length = 442 Score = 788 bits (2035), Expect = 0.0 Identities = 387/445 (86%), Positives = 414/445 (93%), Gaps = 4/445 (0%) Frame = +3 Query: 36 MARNPCDIRILLVAAAVAFIYIQVRLFSTQSSNSHDAGRLAEAEK----CESQLHAMIDQ 203 MAR+PCD+RILLVAAA AFIYIQVRLFSTQS H A RLA+AEK C SQL ++IDQ Sbjct: 1 MARSPCDLRILLVAAAAAFIYIQVRLFSTQS---HYADRLAQAEKSENQCTSQLRSLIDQ 57 Query: 204 VSAQQEKIAALEEMKVRQDEERVQLKILIQDLEKRSLQTLIDKNVVPVAAVVIMACNRPD 383 VS+QQEKI ALEEMK+RQDEERV LKILIQDLEKRS+QTL++ NV PVAAVV+MACNRPD Sbjct: 58 VSSQQEKIVALEEMKIRQDEERVHLKILIQDLEKRSVQTLVNNNVAPVAAVVVMACNRPD 117 Query: 384 YLQRTVESILKYQKAVASKFPLFISQDGTNGEVKKKALSYNQITFMQHVDLEPVRTERPG 563 YLQRTVESILKYQ +VASKFPLFISQDG NGEVKKKALSYN+IT+MQH+DLEPVRTERPG Sbjct: 118 YLQRTVESILKYQTSVASKFPLFISQDGINGEVKKKALSYNEITYMQHLDLEPVRTERPG 177 Query: 564 ENVAYYKIANHYKWALDELFIKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDSDKSIMA 743 E +AYYKIA HYKWALDELFIKH+F RVIILEDDMEIAPDFFDYFEAAAKLLD+DK+IMA Sbjct: 178 ELIAYYKIAKHYKWALDELFIKHNFARVIILEDDMEIAPDFFDYFEAAAKLLDNDKTIMA 237 Query: 744 VSSWNDNGQKQFVYDPKALYRSDFFPGLGWMLTKSTWMELSPKWPKAYWDDWVRLKEVHR 923 VSSWNDNGQKQFVYDPKALYRSDFFPGLGWMLTK TW+ELSPKWPKAYWDDWVRLKEVHR Sbjct: 238 VSSWNDNGQKQFVYDPKALYRSDFFPGLGWMLTKPTWIELSPKWPKAYWDDWVRLKEVHR 297 Query: 924 DRQFIRPEVCRTYNFGEHGSSMGQFFDQYLKPIKLNDAHIDWNSEDLSYLKEDKFLTKFG 1103 DRQFIRPEVCRTYNFGEHGSSMGQFF QYL+PIKLNDAHI WNSEDLSYLKEDKFL +FG Sbjct: 298 DRQFIRPEVCRTYNFGEHGSSMGQFFRQYLEPIKLNDAHIKWNSEDLSYLKEDKFLIQFG 357 Query: 1104 KDVASATPVHGSDALLKAHNLDVDVRIQYDNQGDFERIARQFGIFEEWKDGVPRAAYKGV 1283 KDVASATP+HGSDA LKAHN+D DVRIQY++Q DFERIARQFGIFEEWKDG+PR AYKGV Sbjct: 358 KDVASATPLHGSDAALKAHNMDADVRIQYNDQEDFERIARQFGIFEEWKDGIPRTAYKGV 417 Query: 1284 VVFRYKSSRRRIYLVGPDSLRQLGV 1358 VVFRYKSSRRRIYLVGPDSL QL V Sbjct: 418 VVFRYKSSRRRIYLVGPDSLSQLRV 442
>AK058826:Os02g0832800 | Length = 254 Score = 493 bits (1269), Expect = e-139 Identities = 232/254 (91%), Positives = 243/254 (95%) Frame = +3 Query: 597 YKWALDELFIKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDSDKSIMAVSSWNDNGQKQ 776 YKWALDELFIKH+F RVIILEDDMEIAPDFFDYFEAAAKLLD+DK+IMAVSSWNDNGQKQ Sbjct: 1 YKWALDELFIKHNFARVIILEDDMEIAPDFFDYFEAAAKLLDNDKTIMAVSSWNDNGQKQ 60 Query: 777 FVYDPKALYRSDFFPGLGWMLTKSTWMELSPKWPKAYWDDWVRLKEVHRDRQFIRPEVCR 956 FVYDPKALYRSDFFPGLGWMLTK TW+ELSPKWPKAYWDDWVRLKEVHRDRQFIRPEVCR Sbjct: 61 FVYDPKALYRSDFFPGLGWMLTKPTWIELSPKWPKAYWDDWVRLKEVHRDRQFIRPEVCR 120 Query: 957 TYNFGEHGSSMGQFFDQYLKPIKLNDAHIDWNSEDLSYLKEDKFLTKFGKDVASATPVHG 1136 TYNFGEHGSSMGQFF QYL+PIKLNDAHI WNSEDLSYLKEDKFL +FGKDVASATP+HG Sbjct: 121 TYNFGEHGSSMGQFFRQYLEPIKLNDAHIKWNSEDLSYLKEDKFLIQFGKDVASATPLHG 180 Query: 1137 SDALLKAHNLDVDVRIQYDNQGDFERIARQFGIFEEWKDGVPRAAYKGVVVFRYKSSRRR 1316 SDA LKAHN+D DVRIQY++Q DFERIARQFGIFEEWKDG+PR AYKGVVVFRYKSSRRR Sbjct: 181 SDAALKAHNMDADVRIQYNDQEDFERIARQFGIFEEWKDGIPRTAYKGVVVFRYKSSRRR 240 Query: 1317 IYLVGPDSLRQLGV 1358 IYLVGPDSL QL V Sbjct: 241 IYLVGPDSLSQLRV 254
>AK100501: | Length = 605 Score = 30.8 bits (68), Expect = 3.3 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -3 Query: 1322 VYPSSAALVPEHHHAFVSRPWNTVLPFF 1239 V PS+ LVPEHH F+ W V F Sbjct: 284 VMPSAKGLVPEHHPRFIGTYWGAVSTTF 311
>U07339:Os05g0469600 | Length = 605 Score = 30.8 bits (68), Expect = 3.3 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -3 Query: 1322 VYPSSAALVPEHHHAFVSRPWNTVLPFF 1239 V PS+ LVPEHH F+ W V F Sbjct: 284 VMPSAKGLVPEHHPRFIGTYWGAVSTTF 311
>AK101272:Os05g0469600 | Length = 605 Score = 30.8 bits (68), Expect = 3.3 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -3 Query: 1322 VYPSSAALVPEHHHAFVSRPWNTVLPFF 1239 V PS+ LVPEHH F+ W V F Sbjct: 284 VMPSAKGLVPEHHPRFIGTYWGAVSTTF 311
>AK100678:Os05g0469600 | Length = 605 Score = 30.8 bits (68), Expect = 3.3 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -3 Query: 1322 VYPSSAALVPEHHHAFVSRPWNTVLPFF 1239 V PS+ LVPEHH F+ W V F Sbjct: 284 VMPSAKGLVPEHHPRFIGTYWGAVSTTF 311
>AK069905:Os01g0160100 | Length = 597 Score = 30.4 bits (67), Expect = 4.3 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -3 Query: 1322 VYPSSAALVPEHHHAFVSRPWNTV 1251 V PS+ LVPEHH F+ W V Sbjct: 276 VMPSAKGLVPEHHPRFIGTYWGAV 299
>AK111923:Os01g0635400 | Length = 344 Score = 30.0 bits (66), Expect = 5.6 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 12/49 (24%) Frame = -3 Query: 1520 LEGEINTHHPSI-IKGKNILGNC-----------ALNLHPIIQCFATSG 1410 +EG + HH +GKN C ALN HP+ FATSG Sbjct: 215 IEGRVGVHHVDDGQQGKNFTFKCHRDGNDIYAVNALNFHPVHHTFATSG 263
>AK102655:Os01g0635400 | Length = 344 Score = 30.0 bits (66), Expect = 5.6 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 12/49 (24%) Frame = -3 Query: 1520 LEGEINTHHPSI-IKGKNILGNC-----------ALNLHPIIQCFATSG 1410 +EG + HH +GKN C ALN HP+ FATSG Sbjct: 215 IEGRVGVHHVDDGQQGKNFTFKCHRDGNDIYAVNALNFHPVHHTFATSG 263
>Os10g0363700:Os10g0363700 | Length = 1960 Score = 29.3 bits (64), Expect = 9.5 Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 6/140 (4%) Frame = +3 Query: 192 MIDQVSAQQEKIAALEEMKVRQDEERVQLKILIQDLEKRSLQTLIDKNVVPVAAVVIMAC 371 + D+V+A + I +LE R +EE+ +L+ LI+ E++ +Q DK+ V ++ Sbjct: 1363 LADRVAALEAAIHSLEIDLARVNEEKEELEELIKSNEEQFVQVGTDKSRDIVESI----- 1417 Query: 372 NRPDYLQRTVESILKYQKAVASKFPLFISQDGTNGEVKKKALSYNQITFMQHVDLEPVRT 551 + E +LKYQ + L + + +++ + + LE RT Sbjct: 1418 -------DSSERVLKYQDDILQLKVLLTNLEEQVDDLRSTKDEVEILNMVLKSKLEEQRT 1470 Query: 552 E------RPGENVAYYKIAN 593 E G +A +K N Sbjct: 1471 EILSLLQNSGHELANFKEQN 1490
>AK105750:Os01g0208400 | Length = 616 Score = 29.3 bits (64), Expect = 9.5 Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 4/124 (3%) Frame = +3 Query: 828 GWMLTKSTWMELSPKWPKAYWDDWVRLKEVHRDRQFIRPEVCRTYNFGEHGSSMGQFFDQ 1007 GW+ T S++ +++ W + + +V +V D + + Y+ G + Q Sbjct: 419 GWVQT-SSYGKITATWTQRF--SFVNTNQVREDTEQTVNQTTDAYSGVHVTDHAGVAYSQ 475 Query: 1008 YLK---PIKLNDAHIDWNSEDLSYLKEDKFLTKFGKD-VASATPVHGSDALLKAHNLDVD 1175 + P+ + ++ S D S+ +E +F ++ VA+ P S +L A + VD Sbjct: 476 EAEQSFPLYIYQGQVNQTSND-SFTEETSVQLRFEEERVAAGRPGFWSRSLSNAQDSAVD 534 Query: 1176 VRIQ 1187 VR+Q Sbjct: 535 VRVQ 538
>AK060509:Os09g0509100 | Length = 247 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = -3 Query: 1421 ATSGCQLPHVDRFPNLGNTMLNPKLAKRVRAHQVYPSSAALVPEHHHAFVSRPWN 1257 AT G QLP RF ++ L +R P AA++P+ H A V PW+ Sbjct: 2 ATPGQQLPPGFRFHPTDEELVVQYLRRRALCR---PLPAAVIPDVHDATVLDPWD 53 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 49,982,426 Number of extensions: 1129836 Number of successful extensions: 3148 Number of sequences better than 10.0: 13 Number of HSP's gapped: 3144 Number of HSP's successfully gapped: 13 Length of query: 602 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 496 Effective length of database: 11,155,509 Effective search space: 5533132464 Effective search space used: 5533132464 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
