ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf2n15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK069543:Os12g0168200 333 8e-92
2AK105561:Os08g0177300 31 1.5
3AK103437:Os10g0476900 28 9.7

>AK069543:Os12g0168200 |
          Length = 200
 Score =  333 bits (855), Expect = 8e-92
 Identities = 157/190 (82%), Positives = 173/190 (91%)
 Frame = +2

Query: 104 FAMVCSSNMNRSMEAHAVLGRAALDVESYGTGSQVKLPGPSMHEPNVYDFGTPYGGIYDD 283
           FAMVCSSNMNRSMEAH++LGRA LDV SYGTG+ VKLPGPS+HEPNVYDFGTPY  IYDD
Sbjct: 11  FAMVCSSNMNRSMEAHSLLGRAGLDVASYGTGTHVKLPGPSLHEPNVYDFGTPYNVIYDD 70

Query: 284 LRRKDPDLYKRNGLLPMLKRNISVKLAPQRWQDNTGDGVFDMILTFEERVFDLVVEDMNN 463
           LRRKDPDLYKRNGLLPMLKRN SVKLAPQRWQDN GDG+FD+I +FEERVFDL+V+DM+N
Sbjct: 71  LRRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDDMHN 130

Query: 464 REQRLLKSVLIINMDVKDNHEEAAVGAKLALDLCHKLEAVADDWEEIIDDLVAAFEKQHK 643
           REQR+LK+ LIINMDVKDNHEEA VGAKLALDLC KLE   +DWEEIIDDL+  FEKQHK
Sbjct: 131 REQRMLKNALIINMDVKDNHEEAGVGAKLALDLCQKLEGADEDWEEIIDDLIITFEKQHK 190

Query: 644 RKLTYYISFY 673
           RKLTY ++FY
Sbjct: 191 RKLTYNMAFY 200



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>AK105561:Os08g0177300 |
          Length = 657

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
 Frame = -1

Query: 593 SHQPLLQACGTNLKQASPQQQLLHGYLSRP------------Y*LSARSSITSARGYSYL 450
           +H P +Q  GT   Q+SPQQQ     L++             + LS  S++++ +  S +
Sbjct: 268 THHPHIQ--GTT--QSSPQQQAYAMRLAKDRHMQQCMMTQQQHPLSGASAVSTVQNGSQM 323

Query: 449 QQLSRRPSPQR*VSYQTPHRRCYPA 375
           QQ S+ P+     S Q+ H++ +PA
Sbjct: 324 QQQSQGPASSAIPSSQSQHKQQHPA 348



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>AK103437:Os10g0476900 |
          Length = 599

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
 Frame = +2

Query: 317 NGLLPMLKRNISVKLAPQRWQDNTGDGVFDMILTFEERVFDLVVEDMNNREQRLLKSVLI 496
           N L+  L +   VK A   + +   DG+    +T+   V     +DM +    LL  +L 
Sbjct: 456 NTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLT 515

Query: 497 INMDVKDNHEEAAVGAKLALDLCH--KLEAVAD 589
           +  +VK       + A     LC   K+EA A+
Sbjct: 516 LGFEVKTTTFVMVIQA-----LCRDGKVEAAAE 543


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 22,692,452
Number of extensions: 456354
Number of successful extensions: 1154
Number of sequences better than 10.0: 3
Number of HSP's gapped: 1154
Number of HSP's successfully gapped: 3
Length of query: 323
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 222
Effective length of database: 11,355,714
Effective search space: 2520968508
Effective search space used: 2520968508
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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