| Clone Name | FLbaf2n15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK069543:Os12g0168200 | 333 | 8e-92 | 2 | AK105561:Os08g0177300 | 31 | 1.5 | 3 | AK103437:Os10g0476900 | 28 | 9.7 |
|---|
>AK069543:Os12g0168200 | Length = 200 Score = 333 bits (855), Expect = 8e-92 Identities = 157/190 (82%), Positives = 173/190 (91%) Frame = +2 Query: 104 FAMVCSSNMNRSMEAHAVLGRAALDVESYGTGSQVKLPGPSMHEPNVYDFGTPYGGIYDD 283 FAMVCSSNMNRSMEAH++LGRA LDV SYGTG+ VKLPGPS+HEPNVYDFGTPY IYDD Sbjct: 11 FAMVCSSNMNRSMEAHSLLGRAGLDVASYGTGTHVKLPGPSLHEPNVYDFGTPYNVIYDD 70 Query: 284 LRRKDPDLYKRNGLLPMLKRNISVKLAPQRWQDNTGDGVFDMILTFEERVFDLVVEDMNN 463 LRRKDPDLYKRNGLLPMLKRN SVKLAPQRWQDN GDG+FD+I +FEERVFDL+V+DM+N Sbjct: 71 LRRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDDMHN 130 Query: 464 REQRLLKSVLIINMDVKDNHEEAAVGAKLALDLCHKLEAVADDWEEIIDDLVAAFEKQHK 643 REQR+LK+ LIINMDVKDNHEEA VGAKLALDLC KLE +DWEEIIDDL+ FEKQHK Sbjct: 131 REQRMLKNALIINMDVKDNHEEAGVGAKLALDLCQKLEGADEDWEEIIDDLIITFEKQHK 190 Query: 644 RKLTYYISFY 673 RKLTY ++FY Sbjct: 191 RKLTYNMAFY 200
>AK105561:Os08g0177300 | Length = 657 Score = 30.8 bits (68), Expect = 1.5 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 12/85 (14%) Frame = -1 Query: 593 SHQPLLQACGTNLKQASPQQQLLHGYLSRP------------Y*LSARSSITSARGYSYL 450 +H P +Q GT Q+SPQQQ L++ + LS S++++ + S + Sbjct: 268 THHPHIQ--GTT--QSSPQQQAYAMRLAKDRHMQQCMMTQQQHPLSGASAVSTVQNGSQM 323 Query: 449 QQLSRRPSPQR*VSYQTPHRRCYPA 375 QQ S+ P+ S Q+ H++ +PA Sbjct: 324 QQQSQGPASSAIPSSQSQHKQQHPA 348
>AK103437:Os10g0476900 | Length = 599 Score = 28.1 bits (61), Expect = 9.7 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%) Frame = +2 Query: 317 NGLLPMLKRNISVKLAPQRWQDNTGDGVFDMILTFEERVFDLVVEDMNNREQRLLKSVLI 496 N L+ L + VK A + + DG+ +T+ V +DM + LL +L Sbjct: 456 NTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLT 515 Query: 497 INMDVKDNHEEAAVGAKLALDLCH--KLEAVAD 589 + +VK + A LC K+EA A+ Sbjct: 516 LGFEVKTTTFVMVIQA-----LCRDGKVEAAAE 543 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,692,452 Number of extensions: 456354 Number of successful extensions: 1154 Number of sequences better than 10.0: 3 Number of HSP's gapped: 1154 Number of HSP's successfully gapped: 3 Length of query: 323 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 222 Effective length of database: 11,355,714 Effective search space: 2520968508 Effective search space used: 2520968508 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)