ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5h18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK110977:Os06g0681300 | 133 | 1e-31 | 2 | AK099317:Os07g0446000 | 52 | 4e-07 | 3 | AK072251:Os07g0446000 | 52 | 4e-07 | 4 | AK067855:Os04g0627400 | 49 | 5e-06 | 5 | Os01g0917700:Os01g0917700 | 46 | 4e-05 | 6 | AK119609:Os03g0847900 | 46 | 4e-05 | 7 | AK061411:Os03g0847900 | 46 | 4e-05 | 8 | AK108137:Os01g0967200 | 33 | 0.26 | 9 | AK101033:Os01g0681400 | 33 | 0.26 | 10 | AY364310:Os12g0533400 | 32 | 0.44 | 11 | AK103596:Os07g0408500 | 32 | 0.44 | 12 | AK101984:Os04g0577200 | 32 | 0.58 | 13 | AK071807:Os11g0153400 | 32 | 0.58 | 14 | AK067300:Os12g0155200 | 32 | 0.58 | 15 | AK066810:Os10g0321800 | 31 | 1.3 | 16 | Os07g0518300:Os07g0518300 | 30 | 2.9 | 17 | AK121507:Os03g0213300 | 29 | 4.9 | 18 | Os08g0472400:Os08g0472400 | 28 | 6.4 | 19 | AY364311:Os02g0679500 | 28 | 6.4 | 20 | AK099664:Os03g0644000 | 28 | 6.4 | 21 | AK066359:Os03g0644000 | 28 | 6.4 | 22 | AK108731:Os09g0456700 | 28 | 8.4 |
|---|
>AK110977:Os06g0681300 | Length = 158 Score = 133 bits (335), Expect = 1e-31 Identities = 76/158 (48%), Positives = 98/158 (62%), Gaps = 3/158 (1%) Frame = +1 Query: 208 MAVKMKGIFKGLRIFSHMFA-QKEHEMEIGFPTDVKHVAHIGLGTSDTSPSWMNEFKSSE 384 M +KMKGIFKGL+I S +FA QK+ EMEIG PTDV+HV+HIG+GTSD+ PSWM+EF+ E Sbjct: 1 MEIKMKGIFKGLKIISQIFALQKQQEMEIGCPTDVRHVSHIGVGTSDSCPSWMSEFRGLE 60 Query: 385 DLSAGSLSTAEQSRQTSWTSTDFE-PARSMLPTEINFPDRPAQESSSC-PXXXXXXXXXX 558 +LSAGS+ + QSR+TSW S DF+ P R+ LPTE+ D+ QE++SC Sbjct: 61 ELSAGSMGSFAQSRKTSWASQDFDKPPRATLPTEV-CTDKSGQEAASCCHDIPRGPKNPR 119 Query: 559 XXXXXXXXXXXXXXXXXXXXXFATAFDDFSESQRGVRV 672 F TA DFSE + G+RV Sbjct: 120 RKKAARASSASSFLSRSRSSSFVTACGDFSELRGGLRV 157
>AK099317:Os07g0446000 | Length = 251 Score = 52.4 bits (124), Expect = 4e-07 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 12/70 (17%) Frame = +1 Query: 208 MAVKMK-GIFKGLRIFSHMFAQKE--HEMEIGFPTDVKHVAHIGL---------GTSDTS 351 M+ KMK GI + R S+M KE +M+IGFPTDVKHVAHIG + + Sbjct: 1 MSTKMKKGILRPFRYISNMMDGKEAAQDMQIGFPTDVKHVAHIGWDGPSVPNNNNNTAGA 60 Query: 352 PSWMNEFKSS 381 PSWM ++ S+ Sbjct: 61 PSWMKDYHSA 70
>AK072251:Os07g0446000 | Length = 251 Score = 52.4 bits (124), Expect = 4e-07 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 12/70 (17%) Frame = +1 Query: 208 MAVKMK-GIFKGLRIFSHMFAQKE--HEMEIGFPTDVKHVAHIGL---------GTSDTS 351 M+ KMK GI + R S+M KE +M+IGFPTDVKHVAHIG + + Sbjct: 1 MSTKMKKGILRPFRYISNMMDGKEAAQDMQIGFPTDVKHVAHIGWDGPSVPNNNNNTAGA 60 Query: 352 PSWMNEFKSS 381 PSWM ++ S+ Sbjct: 61 PSWMKDYHSA 70
>AK067855:Os04g0627400 | Length = 85 Score = 48.9 bits (115), Expect = 5e-06 Identities = 23/32 (71%), Positives = 25/32 (78%), Gaps = 2/32 (6%) Frame = +1 Query: 271 KEHEMEIGFPTDVKHVAHIGLG--TSDTSPSW 360 KEHEM+IG PTDVKHVAHIG T + SPSW Sbjct: 7 KEHEMQIGSPTDVKHVAHIGWDGLTGNASPSW 38
>Os01g0917700:Os01g0917700 | Length = 186 Score = 45.8 bits (107), Expect = 4e-05 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 14/76 (18%) Frame = +1 Query: 229 IFKGLRIFSHMFA----------QKEHEMEIGFPTDVKHVAHIG----LGTSDTSPSWMN 366 + +G + S +FA ++E EM IG PTDVKHVAHIG T+ + SW Sbjct: 69 LLRGFKNLSQIFAVYEDDGEEEEEEEREMVIGLPTDVKHVAHIGWDGSTNTTTSLRSWNR 128 Query: 367 EFKSSEDLSAGSLSTA 414 S SA S S+A Sbjct: 129 AAPPSSSASAASTSSA 144
>AK119609:Os03g0847900 | Length = 166 Score = 45.8 bits (107), Expect = 4e-05 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%) Frame = +1 Query: 208 MAVKMKGIFKGLRIFSHMFA--------QKEHEMEIGFPTDVKHVAHIGLGTSDTSPSWM 363 +A ++ + KG++ S +FA ++E EM IG+PTDV+HV HIG + + Sbjct: 84 VATGVQRLIKGIKSLSQIFAMYDDEEEDEEEREMVIGYPTDVQHVGHIGWDGMNKVGGMV 143 Query: 364 NEFKSSEDLSAGSLSTAEQS 423 N F LS L A ++ Sbjct: 144 NAFSLPSSLSLRQLEMAMEA 163
>AK061411:Os03g0847900 | Length = 166 Score = 45.8 bits (107), Expect = 4e-05 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%) Frame = +1 Query: 208 MAVKMKGIFKGLRIFSHMFA--------QKEHEMEIGFPTDVKHVAHIGLGTSDTSPSWM 363 +A ++ + KG++ S +FA ++E EM IG+PTDV+HV HIG + + Sbjct: 84 VATGVQRLIKGIKSLSQIFAMYDDEEEDEEEREMVIGYPTDVQHVGHIGWDGMNKVGGMV 143 Query: 364 NEFKSSEDLSAGSLSTAEQS 423 N F LS L A ++ Sbjct: 144 NAFSLPSSLSLRQLEMAMEA 163
>AK108137:Os01g0967200 | Length = 258 Score = 33.1 bits (74), Expect = 0.26 Identities = 12/20 (60%), Positives = 18/20 (90%) Frame = +1 Query: 268 QKEHEMEIGFPTDVKHVAHI 327 +++ MEIG+PTDV+HVAH+ Sbjct: 20 EQQPPMEIGWPTDVRHVAHV 39
>AK101033:Os01g0681400 | Length = 500 Score = 33.1 bits (74), Expect = 0.26 Identities = 15/45 (33%), Positives = 28/45 (62%) Frame = -1 Query: 473 SMDLAGSKSVEVQEVCLDCSAVLREPADKSSDDLNSFIQLGDVSL 339 + ++A S++ Q +CLDC +L + DK +D+N+ I+ +V L Sbjct: 160 AFEIATSQTQVEQPMCLDCMRLLSDKMDKEIEDVNADIKAYEVCL 204
>AY364310:Os12g0533400 | Length = 364 Score = 32.3 bits (72), Expect = 0.44 Identities = 12/15 (80%), Positives = 15/15 (100%) Frame = +1 Query: 283 MEIGFPTDVKHVAHI 327 MEIG+PTDV+HVAH+ Sbjct: 1 MEIGWPTDVRHVAHV 15
>AK103596:Os07g0408500 | Length = 487 Score = 32.3 bits (72), Expect = 0.44 Identities = 12/15 (80%), Positives = 15/15 (100%) Frame = +1 Query: 283 MEIGFPTDVKHVAHI 327 MEIG+PTDV+HVAH+ Sbjct: 74 MEIGWPTDVRHVAHV 88
>AK101984:Os04g0577200 | Length = 479 Score = 32.0 bits (71), Expect = 0.58 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +1 Query: 268 QKEHEMEIGFPTDVKHVAHI 327 ++E MEIG PTDV+HV+H+ Sbjct: 88 EEEEGMEIGRPTDVRHVSHV 107
>AK071807:Os11g0153400 | Length = 479 Score = 32.0 bits (71), Expect = 0.58 Identities = 12/15 (80%), Positives = 15/15 (100%) Frame = +1 Query: 283 MEIGFPTDVKHVAHI 327 MEIG+PTDV+HVAH+ Sbjct: 89 MEIGWPTDVQHVAHV 103
>AK067300:Os12g0155200 | Length = 193 Score = 32.0 bits (71), Expect = 0.58 Identities = 12/15 (80%), Positives = 15/15 (100%) Frame = +1 Query: 283 MEIGFPTDVKHVAHI 327 MEIG+PTDV+HVAH+ Sbjct: 65 MEIGWPTDVQHVAHV 79
>AK066810:Os10g0321800 | Length = 79 Score = 30.8 bits (68), Expect = 1.3 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Frame = -3 Query: 348 CVTGAQTYVSHMLYICREPNFHL------MLLLSKHVREYPQPFEDSLHL 217 C T +T S L ICR+PN + + LS H+ +P P + + L Sbjct: 8 CTTSIETLYSFTLSICRKPNMRVREPSSSVQTLSNHLNFHPSPSQSNKSL 57
>Os07g0518300:Os07g0518300 | Length = 1473 Score = 29.6 bits (65), Expect = 2.9 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = +3 Query: 108 WFRRFRNKVGFTKFLGNLKVLSLEELFFV*ALTNGGKDEGN----LQRAEDI 251 W + R+ VG+ +LG +L+LE ++FV G KDE LQR +D+ Sbjct: 390 WLQSIRHSVGY--YLGG--ILNLEPIYFVTKFVEGLKDEIRSAILLQRPQDL 437
>AK121507:Os03g0213300 | Length = 1529 Score = 28.9 bits (63), Expect = 4.9 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +1 Query: 295 FPTDVKHVAHIGLGTSDTSPSWMNEFKSSEDLSAGSLSTAEQSRQT 432 FP D+K ++ D PS ++F S E S G A+ +QT Sbjct: 1150 FPADMKMLSFAPRNNEDRGPSIPSQFPSREPPSQGMAVAAQTEQQT 1195
>Os08g0472400:Os08g0472400 | Length = 391 Score = 28.5 bits (62), Expect = 6.4 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Frame = +1 Query: 265 AQKEHEMEIGFPTDVKHVAHIGLGTSDTSPSWMNE--FKSSEDL--SAGSLSTAEQSR-Q 429 A+ E EM FP D++ V +GL + P W +S+ DL +A SL A + Sbjct: 66 ARAEAEMGFAFPPDLRAVLAMGLPSGPGFPDWRTRAGLRSAFDLPIAAASLQIARGALWP 125 Query: 430 TSWTSTDFEPARSM 471 W +P R++ Sbjct: 126 RCWGPRPADPDRAL 139
>AY364311:Os02g0679500 | Length = 439 Score = 28.5 bits (62), Expect = 6.4 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = +1 Query: 283 MEIGFPTDVKHVAHI 327 M+IG PTDV+HV+H+ Sbjct: 62 MQIGRPTDVRHVSHV 76
>AK099664:Os03g0644000 | Length = 501 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = -1 Query: 473 SMDLAGSKSVEVQEVCLDCSAVLREPADKSSDDLNS 366 + ++A S++ Q +CLDC +L + +K +D+N+ Sbjct: 161 AFEIATSQTQIEQPLCLDCMRLLSDKMEKEIEDVNT 196
>AK066359:Os03g0644000 | Length = 501 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = -1 Query: 473 SMDLAGSKSVEVQEVCLDCSAVLREPADKSSDDLNS 366 + ++A S++ Q +CLDC +L + +K +D+N+ Sbjct: 161 AFEIATSQTQIEQPLCLDCMRLLSDKMEKEIEDVNT 196
>AK108731:Os09g0456700 | Length = 396 Score = 28.1 bits (61), Expect = 8.4 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +1 Query: 262 FAQKEHEMEIGFPTDVKHVAHIGLGTSDTSPSWMNE--FKSSEDL--SAGSLSTAE 417 FA+ E EM FP D++ V +GL + P W +++ DL +A SL A+ Sbjct: 73 FARVEAEMGFTFPPDLRAVLAMGLPSGAGFPDWRGRAWLRAAFDLPIAAASLQIAK 128 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,553,079 Number of extensions: 549545 Number of successful extensions: 1700 Number of sequences better than 10.0: 22 Number of HSP's gapped: 1699 Number of HSP's successfully gapped: 22 Length of query: 291 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 191 Effective length of database: 11,395,755 Effective search space: 2176589205 Effective search space used: 2176589205 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
