ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf5h18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q497H0:ZFAN3_MOUSE AN1-type zinc finger protein 3 - Mus musculus... 32 4.4
2Q5U2M7:ZFAN3_RAT AN1-type zinc finger protein 3 - Rattus norvegi... 31 5.7
3P78965:GSHR_SCHPO Glutathione reductase - Schizosaccharomyces po... 31 5.7
4Q9H8U3:ZFAN3_HUMAN AN1-type zinc finger protein 3 - Homo sapiens... 31 7.4

>Q497H0:ZFAN3_MOUSE AN1-type zinc finger protein 3 - Mus musculus (Mouse)|
          Length = 227
 Score = 31.6 bits (70), Expect = 4.4
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +1

Query: 343 DTSPSWMNEFKSSEDLSAGSLSTAEQSRQTSWTSTDFEPARSMLPTEINFPDRPAQESSS 522
           D++PS  N   S  DL   S  T   +  TS T+    P++  LPTE+N      +E   
Sbjct: 47  DSTPSTSN---SQSDLF--SEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSTEECGP 101

Query: 523 C 525
           C
Sbjct: 102 C 102



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>Q5U2M7:ZFAN3_RAT AN1-type zinc finger protein 3 - Rattus norvegicus (Rat)|
          Length = 227

 Score = 31.2 bits (69), Expect = 5.7
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +1

Query: 343 DTSPSWMNEFKSSEDLSAGSLSTAEQSRQTSWTSTDFEPARSMLPTEINFPDRPAQESSS 522
           D++PS  N   S  DL   S  T   +  TS T+    P++  LPTE+N      +E   
Sbjct: 47  DSTPSTSN---SQSDLF--SEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSEEECGP 101

Query: 523 C 525
           C
Sbjct: 102 C 102



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>P78965:GSHR_SCHPO Glutathione reductase - Schizosaccharomyces pombe (Fission yeast)|
          Length = 464

 Score = 31.2 bits (69), Expect = 5.7
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
 Frame = +1

Query: 208 MAVKMKGIFKGLRIFSHMFAQKEHEMEIGFPT----DVKHVAHIGLGTSDTSPSWMNEFK 375
           +AV++ G+F  L   +HMF ++   +    P      + H  HIG+     S     EFK
Sbjct: 189 IAVELAGVFAALGTETHMFIRQSKFLRKFDPIISDGIMDHFQHIGINVHTNS----LEFK 244

Query: 376 SSEDLSAGSLSTAEQSRQT 432
             E L +G L   +Q   T
Sbjct: 245 KVEKLPSGELCIHQQDGST 263



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>Q9H8U3:ZFAN3_HUMAN AN1-type zinc finger protein 3 - Homo sapiens (Human)|
          Length = 227

 Score = 30.8 bits (68), Expect = 7.4
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +1

Query: 343 DTSPSWMNEFKSSEDLSAGSLSTAEQSRQTSWTSTDFEPARSMLPTEINFPDRPAQESSS 522
           D++PS  N   S  DL   S  T   +  TS T+    P++  LPTE+N      +E   
Sbjct: 47  DSAPSTSN---SQSDLF--SEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGP 101

Query: 523 C 525
           C
Sbjct: 102 C 102


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 149,272,805
Number of extensions: 3193116
Number of successful extensions: 9192
Number of sequences better than 10.0: 4
Number of HSP's gapped: 9173
Number of HSP's successfully gapped: 4
Length of query: 291
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 179
Effective length of database: 69,965,399
Effective search space: 12523806421
Effective search space used: 12523806421
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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