>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
Length = 35954743
Score = 969 bits (489), Expect = 0.0
Identities = 903/1041 (86%)
Strand = Plus / Minus
Query: 1421 agcggaatcttgaagcattgatgctacttcaaaggaatggtttgctgaaaagtaatgctt 1480
|||| ||||||||||||||||| | ||||||||||||||||| | |||||| ||||| |
Sbjct: 29081243 agcgcaatcttgaagcattgattattcttcaaaggaatggtttacagaaaagcaatgcat 29081184
Query: 1481 ccattgatgtggtagctactctgttcggtgacggcaaagatgtcatgaagatggagcaga 1540
|||||| || ||||| ||| | || || ||| ||| ||||| ||||||||||||||||
Sbjct: 29081183 ccattggcgtagtagccactttatttggggacaacaaggatgttatgaagatggagcaga 29081124
Query: 1541 attgcctgattgattggggtgaatcgagtctacctgatccaaggctatcagagaggtatg 1600
|| ||||| ||| ||||||||||| ||| ||||||||| ||| |||||||||||||||
Sbjct: 29081123 atcacctgactgactggggtgaatcaagtgcacctgatccgaggatatcagagaggtatg 29081064
Query: 1601 catttgatgactcccaattaagggctctctcattaggcctgaacaagaagaggcctgttt 1660
|| | |||| |||||| |||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 29081063 cactagatgcctcccagttaaaggctctctcattaggcttgaacaagaagaggcctgttc 29081004
Query: 1661 tagtcatccaggggcctcctggcacgggcaagacagttttgctcacggaactcattgtac 1720
|| | |||||||| ||||||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 29081003 taattatccagggtcctcctggcacgggcaagacagtcttgctcacagagctcattgtac 29080944
Query: 1721 gtgctgtccggcagggtgaaaatgtccttgtgacagctccaagcaatgcggcagtcgata 1780
||||||||| |||||||| || ||||||||||||||||| |||||||||||||| ||||
Sbjct: 29080943 gtgctgtccaacagggtgagaacgtccttgtgacagctcctagcaatgcggcagtagata 29080884
Query: 1781 acatggttgaaaagttatcaagtactggcttaaacattgtgcgagttggaaaccctgctc 1840
|||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 29080883 acatggttgaaaggttgtcaaacactggcttgaacattgtgcgagttggaaaccctgctc 29080824
Query: 1841 ggatatcaccatcagttacttcgaagtccttggcagagattgtgaatggaaggcttagtc 1900
||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||||||| |
Sbjct: 29080823 ggatatcaccatctgttgcttcaaagtccttggcggagattgtgaacggaaggcttgagc 29080764
Query: 1901 agtttaggaaggaacttgagagaaagagaactgacttaagaaaggacttgagggactgca 1960
|||| |||||||| |||||||||||||||| ||| |||||||||||| |||| ||||||
Sbjct: 29080763 agttcaggaaggagcttgagagaaagagaagtgatttaagaaaggacctgagctactgca 29080704
Query: 1961 tagaggacgattctttagcagcaggcattcgtcaacttctgaagcaacttgggagggatc 2020
||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||
Sbjct: 29080703 tagaggatgattctttagctgccggcattcgtcaactgctgaagcaacttggaagggatc 29080644
Query: 2021 tggaaatgaaagagaaagaaacgatcatggaagtgctatctgatgcacaggttgtgcttt 2080
|||||| |||||| || |||| ||| | ||||| || ||||| ||||||||||||||||
Sbjct: 29080643 tggaaaagaaagaaaaggaaatgattagggaagcactctctgaggcacaggttgtgcttt 29080584
Query: 2081 ctactaacacaggggcagccgatccacttatcaggaaaattggttgctttgacttggtaa 2140
|||||||||||||||||||||||||||||||||||| || |||| |||||||||||||
Sbjct: 29080583 ctactaacacaggggcagccgatccacttatcaggagaacatgttgttttgacttggtaa 29080524
Query: 2141 ttatagatgaagcaggtcaaggaattgagccctcttgctggattcccatactgcagggga 2200
| |||||||||||||| |||| ||| || ||||| ||||||||||||||| ||||||| |
Sbjct: 29080523 tcatagatgaagcagggcaagcaatagaaccctcctgctggattcccatattgcagggaa 29080464
Query: 2201 aacgttgtattcttgctggtgatcattgccaacttgcacctgccatattgtcaaggaagg 2260
| ||||| ||||| ||||||||||||||||| |||||||| | || |||||||| ||||
Sbjct: 29080463 agcgttgcattctcgctggtgatcattgccagcttgcaccagtaattttgtcaagaaagg 29080404
Query: 2261 cattggaaggtgggcttggtaaatctatgatggaaagggcttcattgttgcatgatggat 2320
| || || || ||||||||||||||| || ||||||| ||||| | ||||| ||||||
Sbjct: 29080403 ccttagatggagggcttggtaaatctttgttggaaagagcttcgtcattgcacaatggat 29080344
Query: 2321 tacttactacaagactgacagtccagcatagaatgcatgattcaatagccagttgggcat 2380
|||| || ||||| ||||||| ||||| |||||| |||| |||||||| ||||||||||
Sbjct: 29080343 tactgacaacaaggttgacagtgcagcacagaatgaatgactcaatagctagttgggcat 29080284
Query: 2381 ctaaagagatgtatcaggggttactccagtcttctcattctgtagcttcacatcttcttg 2440
|||||||||||||||| || | ||| | |||||||||||||| |||||||| |||||
Sbjct: 29080283 ctaaagagatgtatcatggactgctcaaatcttctcattctgttgcttcacaaactcttg 29080224
Query: 2441 ccgactctccagttgtaaagg 2461
| |||||||||||||| ||||
Sbjct: 29080223 ctgactctccagttgtgaagg 29080203
Score = 500 bits (252), Expect = e-137
Identities = 627/752 (83%)
Strand = Plus / Minus
Query: 388 tgcgtgccgtcggtggaggaggcgtccataagggtagggacgctgtatgagaacggcgat 447
||||||||||| |||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 29082783 tgcgtgccgtccatggaggaggcgtccatcagggtcgggacgctgtaccagaacggcgac 29082724
Query: 448 ccactaggccggaaggagcttggccggtgtgttgtggagtggctaaggcaggggatgcaa 507
|| || || ||||||||||| |||||||| || ||||||||||| ||||| |||||||||
Sbjct: 29082723 ccgctggggcggaaggagctcggccggtgcgtggtggagtggctgaggcaagggatgcaa 29082664
Query: 508 tccatggcatccaaattcgcttcggccgagcttcagggtgagatggcggacctcaccaca 567
|||||||| ||||| ||||| || |||||||| ||||| || |||||||||||| | |
Sbjct: 29082663 tccatggcgtccaagttcgcctccgccgagctgcagggcgacatggcggacctcgacgcg 29082604
Query: 568 gcggcattgaccctgaattggggatcagcagaaggccagcttgggtttgtgatccaggca 627
||||||||| | | | | |||||||| ||||| || ||||||||| ||||||||||||
Sbjct: 29082603 gcggcattggctcaggagtggggatctgcagatgggaggcttgggttcgtgatccaggca 29082544
Query: 628 cagccttatctctcacccgtccccatgcccaagggtctggaggcactctgcttcaaggcc 687
|||||||| | || || |||||||||||||||| ||||| ||||||||| ||||||||
Sbjct: 29082543 cagccttacatgtcggccatccccatgcccaagggcctggaagcactctgcctcaaggcc 29082484
Query: 688 tgtacacactaccccacccttttcgaccatttccagcgtgagctccgtggtgtcctgctg 747
|| |||||||||||||| || || || |||||||||||||||||||||| ||| |||| |
Sbjct: 29082483 tgcacacactaccccacactctttgatcatttccagcgtgagctccgtgatgttctgcag 29082424
Query: 748 agttaccagaaccaggggctcatctacgactggcgctccacgcagacatggaagctgttg 807
|||| |||||||||||| ||||||| ||| ||||| || || ||| |||||||||| ||
Sbjct: 29082423 agttgccagaaccagggactcatctccgattggcgatcgacacagtcatggaagcttctg 29082364
Query: 808 aaggaaatggccaattctactcatcaccgggcagctgtgcgcaggacgacaccacgaact 867
|| ||||||||||||||| || || |||| ||||||||||||||| ||||| ||
Sbjct: 29082363 aaagaaatggccaattctgtgcagcatcgggaggctgtgcgcaggacggtgccacggcct 29082304
Query: 868 aaagcggttcacagtagcatcggcataagcctcaagaaggtaaggctgatgcaggatagg 927
||||| || ||| ||||||| ||| |||||||||| ||||| | |||||||| |||
Sbjct: 29082303 aaagctgtgcacggtagcattggcgtaagcctcaacaaggtgaaattgatgcagagaagg 29082244
Query: 928 attgaagactttgtgaggcatatgtcagacctgctacgcatcgagcgagacgcggagctg 987
|||||| | | ||||| ||||||||| |||||||| |||| || || || | |||||||
Sbjct: 29082243 attgaacaatatgtgacgcatatgtcggacctgctgtgcattgaacgggatgtggagctg 29082184
Query: 988 gagtttacacaggaggagctgaatgccacaactatgctcgacaacaattccaagccatcc 1047
||||| |||||||||||||||||||| | | ||||||||| | |||| ||||| ||
Sbjct: 29082183 gagttcacacaggaggagctgaatgctgccccaatgctcgacgatgattctgagccaccc 29082124
Query: 1048 aagccagttgagtacttggtgacccatgggcaggctcagcaggagcagtgtgacaccatt 1107
|| || ||||| ||| |||||| |||||||||| |||||||||||||||| || ||||||
Sbjct: 29082123 aaaccggttgaatacctggtgagccatgggcagtctcagcaggagcagtgcgataccatt 29082064
Query: 1108 tgcaacttgagtgtcatcagcagctcaactgg 1139
|||||||||| ||| ||||| |||||||||||
Sbjct: 29082063 tgcaacttgaatgtgatcagtagctcaactgg 29082032
Score = 363 bits (183), Expect = 3e-96
Identities = 252/275 (91%)
Strand = Plus / Minus
Query: 1141 ttgggaggcttgcatttggttctattcagaattgaaggtgaacacaagctgcctccaact 1200
||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 29081913 ttgggaggcctacatttggttctattcagaattgaaggcggacacaagctgcctccaacc 29081854
Query: 1201 acactgtcacctggggacatggtttgtgtgagaacatgtaatagccgtggtgagggagcc 1260
|||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 29081853 acactgtctcctggggacatggtctgtgtaagaacatgtaatagccgtggtgaaggagca 29081794
Query: 1261 acttcttgcatgcaaggctttctttataatctcggggaggatggttgcagcataactgtg 1320
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||
Sbjct: 29081793 acttcttgcatgcaaggctttgtttataatctaggggaggatggttgcagcataactctg 29081734
Query: 1321 gctctggaatctcgccatggtgacccaactttctccaggttatttgggaaaagtgtgcgc 1380
||||||||||| ||||||||||| || || ||||||||| | || |||||||||||||||
Sbjct: 29081733 gctctggaatcccgccatggtgatcctacattctccaggctgttcgggaaaagtgtgcgc 29081674
Query: 1381 attgaccggatacagggattggctgatgcacttac 1415
|||||||| ||||| |||||||||||||| |||||
Sbjct: 29081673 attgaccgtatacaaggattggctgatgctcttac 29081639
Score = 218 bits (110), Expect = 1e-52
Identities = 212/246 (86%)
Strand = Plus / Minus
Query: 2787 ggttcggtcaaacccactgggagcggtagggttcatgggcgacagcaggctgatgaatgt 2846
|||||| ||||||||||||||||||||||| ||| | || |||||||||| ||||||||
Sbjct: 29078634 ggttcgatcaaacccactgggagcggtaggtttccttggtgacagcaggcgcatgaatgt 29078575
Query: 2847 ggctatcacaagggcccgccgacatgtcaccgtggtatgtgacacctcgaccatttgcca 2906
|||||| |||||||| |||| |||||||||||||||||||||||||| || || || ||
Sbjct: 29078574 ggctattacaagggcatgccggcatgtcaccgtggtatgtgacacctctactatctgtca 29078515
Query: 2907 cagcaccttcctcgcccggctcctccgtcatatcaggcggtatggacaagtaaaacatgt 2966
|||||||||||| || ||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 29078514 cagcaccttcctggcaaggctccttcgtcatatcaggcgatatgggcaagtgaaacatgt 29078455
Query: 2967 tgcacctggttccctagatggggtttccggcctcggcttcagccaacccactctcccgtc 3026
| |||||||| | |||||||| || ||||| |||||||| ||||||||||| |||||
Sbjct: 29078454 agtgcctggttctttggatggggtgtctggccttggcttcagtcaacccactctgccgtc 29078395
Query: 3027 tatcag 3032
|||||
Sbjct: 29078394 catcag 29078389
Score = 153 bits (77), Expect = 5e-33
Identities = 140/161 (86%)
Strand = Plus / Minus
Query: 2629 ggagtgtctccaagtgagatagccatccagtcaccctacattgctcaggttcaattgttg 2688
||||| ||||||| | ||||||| | || ||||||||||||||||| || || |||||
Sbjct: 29078983 ggagtatctccaacagcgatagccgttcaatcaccctacattgctcaagtgcagttgtta 29078924
Query: 2689 agagagaagatagaagaatatccagggctttctggggttgaggtttcaacagtagatagc 2748
||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 29078923 agagagaggctagaagaatatccagggctttctggggttgaggtttcaaccatagatagc 29078864
Query: 2749 tttcaagggagggaggcagatgcggtggtcctatcaatggt 2789
|||||||||||||| || ||||| || ||| |||| |||||
Sbjct: 29078863 tttcaagggagggaagctgatgcagttgtcatatcgatggt 29078823
Score = 111 bits (56), Expect = 2e-20
Identities = 137/164 (83%)
Strand = Plus / Minus
Query: 2467 tggataactcggtgcccactgcttctacttgatacccgaatgccatatggaattctaaat 2526
|||||||| ||||||||||||||| |||||||||| |||||||||||||| || |
Sbjct: 29079409 tggataacacggtgcccactgcttttacttgatactcgaatgccatatggggccctggac 29079350
Query: 2527 gctgattgtgtggagcatttagaccctgctggcacaggctcgttttataatgatggagaa 2586
||| ||||| ||| || |||||| | |||| |||||||| |||||||||||||||||
Sbjct: 29079349 actggttgtggggaacaaatagacctttctggtacaggctcattttataatgatggagag 29079290
Query: 2587 gcagacatagttacacagcatgttctcaatcttgtgcattgtgg 2630
||||| || || ||||| ||||||||||| ||||| ||||||||
Sbjct: 29079289 gcagatattgtgacacaacatgttctcaaccttgtacattgtgg 29079246
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0724B10
Length = 169143
Score = 969 bits (489), Expect = 0.0
Identities = 903/1041 (86%)
Strand = Plus / Minus
Query: 1421 agcggaatcttgaagcattgatgctacttcaaaggaatggtttgctgaaaagtaatgctt 1480
|||| ||||||||||||||||| | ||||||||||||||||| | |||||| ||||| |
Sbjct: 127408 agcgcaatcttgaagcattgattattcttcaaaggaatggtttacagaaaagcaatgcat 127349
Query: 1481 ccattgatgtggtagctactctgttcggtgacggcaaagatgtcatgaagatggagcaga 1540
|||||| || ||||| ||| | || || ||| ||| ||||| ||||||||||||||||
Sbjct: 127348 ccattggcgtagtagccactttatttggggacaacaaggatgttatgaagatggagcaga 127289
Query: 1541 attgcctgattgattggggtgaatcgagtctacctgatccaaggctatcagagaggtatg 1600
|| ||||| ||| ||||||||||| ||| ||||||||| ||| |||||||||||||||
Sbjct: 127288 atcacctgactgactggggtgaatcaagtgcacctgatccgaggatatcagagaggtatg 127229
Query: 1601 catttgatgactcccaattaagggctctctcattaggcctgaacaagaagaggcctgttt 1660
|| | |||| |||||| |||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 127228 cactagatgcctcccagttaaaggctctctcattaggcttgaacaagaagaggcctgttc 127169
Query: 1661 tagtcatccaggggcctcctggcacgggcaagacagttttgctcacggaactcattgtac 1720
|| | |||||||| ||||||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 127168 taattatccagggtcctcctggcacgggcaagacagtcttgctcacagagctcattgtac 127109
Query: 1721 gtgctgtccggcagggtgaaaatgtccttgtgacagctccaagcaatgcggcagtcgata 1780
||||||||| |||||||| || ||||||||||||||||| |||||||||||||| ||||
Sbjct: 127108 gtgctgtccaacagggtgagaacgtccttgtgacagctcctagcaatgcggcagtagata 127049
Query: 1781 acatggttgaaaagttatcaagtactggcttaaacattgtgcgagttggaaaccctgctc 1840
|||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 127048 acatggttgaaaggttgtcaaacactggcttgaacattgtgcgagttggaaaccctgctc 126989
Query: 1841 ggatatcaccatcagttacttcgaagtccttggcagagattgtgaatggaaggcttagtc 1900
||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||||||| |
Sbjct: 126988 ggatatcaccatctgttgcttcaaagtccttggcggagattgtgaacggaaggcttgagc 126929
Query: 1901 agtttaggaaggaacttgagagaaagagaactgacttaagaaaggacttgagggactgca 1960
|||| |||||||| |||||||||||||||| ||| |||||||||||| |||| ||||||
Sbjct: 126928 agttcaggaaggagcttgagagaaagagaagtgatttaagaaaggacctgagctactgca 126869
Query: 1961 tagaggacgattctttagcagcaggcattcgtcaacttctgaagcaacttgggagggatc 2020
||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||
Sbjct: 126868 tagaggatgattctttagctgccggcattcgtcaactgctgaagcaacttggaagggatc 126809
Query: 2021 tggaaatgaaagagaaagaaacgatcatggaagtgctatctgatgcacaggttgtgcttt 2080
|||||| |||||| || |||| ||| | ||||| || ||||| ||||||||||||||||
Sbjct: 126808 tggaaaagaaagaaaaggaaatgattagggaagcactctctgaggcacaggttgtgcttt 126749
Query: 2081 ctactaacacaggggcagccgatccacttatcaggaaaattggttgctttgacttggtaa 2140
|||||||||||||||||||||||||||||||||||| || |||| |||||||||||||
Sbjct: 126748 ctactaacacaggggcagccgatccacttatcaggagaacatgttgttttgacttggtaa 126689
Query: 2141 ttatagatgaagcaggtcaaggaattgagccctcttgctggattcccatactgcagggga 2200
| |||||||||||||| |||| ||| || ||||| ||||||||||||||| ||||||| |
Sbjct: 126688 tcatagatgaagcagggcaagcaatagaaccctcctgctggattcccatattgcagggaa 126629
Query: 2201 aacgttgtattcttgctggtgatcattgccaacttgcacctgccatattgtcaaggaagg 2260
| ||||| ||||| ||||||||||||||||| |||||||| | || |||||||| ||||
Sbjct: 126628 agcgttgcattctcgctggtgatcattgccagcttgcaccagtaattttgtcaagaaagg 126569
Query: 2261 cattggaaggtgggcttggtaaatctatgatggaaagggcttcattgttgcatgatggat 2320
| || || || ||||||||||||||| || ||||||| ||||| | ||||| ||||||
Sbjct: 126568 ccttagatggagggcttggtaaatctttgttggaaagagcttcgtcattgcacaatggat 126509
Query: 2321 tacttactacaagactgacagtccagcatagaatgcatgattcaatagccagttgggcat 2380
|||| || ||||| ||||||| ||||| |||||| |||| |||||||| ||||||||||
Sbjct: 126508 tactgacaacaaggttgacagtgcagcacagaatgaatgactcaatagctagttgggcat 126449
Query: 2381 ctaaagagatgtatcaggggttactccagtcttctcattctgtagcttcacatcttcttg 2440
|||||||||||||||| || | ||| | |||||||||||||| |||||||| |||||
Sbjct: 126448 ctaaagagatgtatcatggactgctcaaatcttctcattctgttgcttcacaaactcttg 126389
Query: 2441 ccgactctccagttgtaaagg 2461
| |||||||||||||| ||||
Sbjct: 126388 ctgactctccagttgtgaagg 126368
Score = 500 bits (252), Expect = e-137
Identities = 627/752 (83%)
Strand = Plus / Minus
Query: 388 tgcgtgccgtcggtggaggaggcgtccataagggtagggacgctgtatgagaacggcgat 447
||||||||||| |||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 128948 tgcgtgccgtccatggaggaggcgtccatcagggtcgggacgctgtaccagaacggcgac 128889
Query: 448 ccactaggccggaaggagcttggccggtgtgttgtggagtggctaaggcaggggatgcaa 507
|| || || ||||||||||| |||||||| || ||||||||||| ||||| |||||||||
Sbjct: 128888 ccgctggggcggaaggagctcggccggtgcgtggtggagtggctgaggcaagggatgcaa 128829
Query: 508 tccatggcatccaaattcgcttcggccgagcttcagggtgagatggcggacctcaccaca 567
|||||||| ||||| ||||| || |||||||| ||||| || |||||||||||| | |
Sbjct: 128828 tccatggcgtccaagttcgcctccgccgagctgcagggcgacatggcggacctcgacgcg 128769
Query: 568 gcggcattgaccctgaattggggatcagcagaaggccagcttgggtttgtgatccaggca 627
||||||||| | | | | |||||||| ||||| || ||||||||| ||||||||||||
Sbjct: 128768 gcggcattggctcaggagtggggatctgcagatgggaggcttgggttcgtgatccaggca 128709
Query: 628 cagccttatctctcacccgtccccatgcccaagggtctggaggcactctgcttcaaggcc 687
|||||||| | || || |||||||||||||||| ||||| ||||||||| ||||||||
Sbjct: 128708 cagccttacatgtcggccatccccatgcccaagggcctggaagcactctgcctcaaggcc 128649
Query: 688 tgtacacactaccccacccttttcgaccatttccagcgtgagctccgtggtgtcctgctg 747
|| |||||||||||||| || || || |||||||||||||||||||||| ||| |||| |
Sbjct: 128648 tgcacacactaccccacactctttgatcatttccagcgtgagctccgtgatgttctgcag 128589
Query: 748 agttaccagaaccaggggctcatctacgactggcgctccacgcagacatggaagctgttg 807
|||| |||||||||||| ||||||| ||| ||||| || || ||| |||||||||| ||
Sbjct: 128588 agttgccagaaccagggactcatctccgattggcgatcgacacagtcatggaagcttctg 128529
Query: 808 aaggaaatggccaattctactcatcaccgggcagctgtgcgcaggacgacaccacgaact 867
|| ||||||||||||||| || || |||| ||||||||||||||| ||||| ||
Sbjct: 128528 aaagaaatggccaattctgtgcagcatcgggaggctgtgcgcaggacggtgccacggcct 128469
Query: 868 aaagcggttcacagtagcatcggcataagcctcaagaaggtaaggctgatgcaggatagg 927
||||| || ||| ||||||| ||| |||||||||| ||||| | |||||||| |||
Sbjct: 128468 aaagctgtgcacggtagcattggcgtaagcctcaacaaggtgaaattgatgcagagaagg 128409
Query: 928 attgaagactttgtgaggcatatgtcagacctgctacgcatcgagcgagacgcggagctg 987
|||||| | | ||||| ||||||||| |||||||| |||| || || || | |||||||
Sbjct: 128408 attgaacaatatgtgacgcatatgtcggacctgctgtgcattgaacgggatgtggagctg 128349
Query: 988 gagtttacacaggaggagctgaatgccacaactatgctcgacaacaattccaagccatcc 1047
||||| |||||||||||||||||||| | | ||||||||| | |||| ||||| ||
Sbjct: 128348 gagttcacacaggaggagctgaatgctgccccaatgctcgacgatgattctgagccaccc 128289
Query: 1048 aagccagttgagtacttggtgacccatgggcaggctcagcaggagcagtgtgacaccatt 1107
|| || ||||| ||| |||||| |||||||||| |||||||||||||||| || ||||||
Sbjct: 128288 aaaccggttgaatacctggtgagccatgggcagtctcagcaggagcagtgcgataccatt 128229
Query: 1108 tgcaacttgagtgtcatcagcagctcaactgg 1139
|||||||||| ||| ||||| |||||||||||
Sbjct: 128228 tgcaacttgaatgtgatcagtagctcaactgg 128197
Score = 363 bits (183), Expect = 3e-96
Identities = 252/275 (91%)
Strand = Plus / Minus
Query: 1141 ttgggaggcttgcatttggttctattcagaattgaaggtgaacacaagctgcctccaact 1200
||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 128078 ttgggaggcctacatttggttctattcagaattgaaggcggacacaagctgcctccaacc 128019
Query: 1201 acactgtcacctggggacatggtttgtgtgagaacatgtaatagccgtggtgagggagcc 1260
|||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 128018 acactgtctcctggggacatggtctgtgtaagaacatgtaatagccgtggtgaaggagca 127959
Query: 1261 acttcttgcatgcaaggctttctttataatctcggggaggatggttgcagcataactgtg 1320
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||
Sbjct: 127958 acttcttgcatgcaaggctttgtttataatctaggggaggatggttgcagcataactctg 127899
Query: 1321 gctctggaatctcgccatggtgacccaactttctccaggttatttgggaaaagtgtgcgc 1380
||||||||||| ||||||||||| || || ||||||||| | || |||||||||||||||
Sbjct: 127898 gctctggaatcccgccatggtgatcctacattctccaggctgttcgggaaaagtgtgcgc 127839
Query: 1381 attgaccggatacagggattggctgatgcacttac 1415
|||||||| ||||| |||||||||||||| |||||
Sbjct: 127838 attgaccgtatacaaggattggctgatgctcttac 127804
Score = 218 bits (110), Expect = 1e-52
Identities = 212/246 (86%)
Strand = Plus / Minus
Query: 2787 ggttcggtcaaacccactgggagcggtagggttcatgggcgacagcaggctgatgaatgt 2846
|||||| ||||||||||||||||||||||| ||| | || |||||||||| ||||||||
Sbjct: 124799 ggttcgatcaaacccactgggagcggtaggtttccttggtgacagcaggcgcatgaatgt 124740
Query: 2847 ggctatcacaagggcccgccgacatgtcaccgtggtatgtgacacctcgaccatttgcca 2906
|||||| |||||||| |||| |||||||||||||||||||||||||| || || || ||
Sbjct: 124739 ggctattacaagggcatgccggcatgtcaccgtggtatgtgacacctctactatctgtca 124680
Query: 2907 cagcaccttcctcgcccggctcctccgtcatatcaggcggtatggacaagtaaaacatgt 2966
|||||||||||| || ||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 124679 cagcaccttcctggcaaggctccttcgtcatatcaggcgatatgggcaagtgaaacatgt 124620
Query: 2967 tgcacctggttccctagatggggtttccggcctcggcttcagccaacccactctcccgtc 3026
| |||||||| | |||||||| || ||||| |||||||| ||||||||||| |||||
Sbjct: 124619 agtgcctggttctttggatggggtgtctggccttggcttcagtcaacccactctgccgtc 124560
Query: 3027 tatcag 3032
|||||
Sbjct: 124559 catcag 124554
Score = 153 bits (77), Expect = 5e-33
Identities = 140/161 (86%)
Strand = Plus / Minus
Query: 2629 ggagtgtctccaagtgagatagccatccagtcaccctacattgctcaggttcaattgttg 2688
||||| ||||||| | ||||||| | || ||||||||||||||||| || || |||||
Sbjct: 125148 ggagtatctccaacagcgatagccgttcaatcaccctacattgctcaagtgcagttgtta 125089
Query: 2689 agagagaagatagaagaatatccagggctttctggggttgaggtttcaacagtagatagc 2748
||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 125088 agagagaggctagaagaatatccagggctttctggggttgaggtttcaaccatagatagc 125029
Query: 2749 tttcaagggagggaggcagatgcggtggtcctatcaatggt 2789
|||||||||||||| || ||||| || ||| |||| |||||
Sbjct: 125028 tttcaagggagggaagctgatgcagttgtcatatcgatggt 124988
Score = 111 bits (56), Expect = 2e-20
Identities = 137/164 (83%)
Strand = Plus / Minus
Query: 2467 tggataactcggtgcccactgcttctacttgatacccgaatgccatatggaattctaaat 2526
|||||||| ||||||||||||||| |||||||||| |||||||||||||| || |
Sbjct: 125574 tggataacacggtgcccactgcttttacttgatactcgaatgccatatggggccctggac 125515
Query: 2527 gctgattgtgtggagcatttagaccctgctggcacaggctcgttttataatgatggagaa 2586
||| ||||| ||| || |||||| | |||| |||||||| |||||||||||||||||
Sbjct: 125514 actggttgtggggaacaaatagacctttctggtacaggctcattttataatgatggagag 125455
Query: 2587 gcagacatagttacacagcatgttctcaatcttgtgcattgtgg 2630
||||| || || ||||| ||||||||||| ||||| ||||||||
Sbjct: 125454 gcagatattgtgacacaacatgttctcaaccttgtacattgtgg 125411
>ref|NM_001069156.1| Oryza sativa (japonica cultivar-group) Os09g0130800 (Os09g0130800)
mRNA, complete cds
Length = 3460
Score = 272 bits (137), Expect = 8e-69
Identities = 428/525 (81%)
Strand = Plus / Plus
Query: 2350 agaatgcatgattcaatagccagttgggcatctaaagagatgtatcaggggttactccag 2409
||||||||||||||||| ||||||||||||||||| ||||||||| | || || ||| |
Sbjct: 2445 agaatgcatgattcaattgccagttgggcatctaacgagatgtatgatggttttctcaaa 2504
Query: 2410 tcttctcattctgtagcttcacatcttcttgccgactctccagttgtaaaggatacttgg 2469
|| || | || || ||||| ||||||||||| || | ||| || | ||||| ||||||
Sbjct: 2505 tcctccccatccgttgcttctcatcttcttgctgattacccatttatcaaggaaacttgg 2564
Query: 2470 ataactcggtgcccactgcttctacttgatacccgaatgccatatggaattctaaatgct 2529
||||||||||| | | ||| ||||||| || || ||||| || |||| | | ||| |
Sbjct: 2565 ataactcggtgtgcctttcttttacttgacactcgtatgccgtacggaagtttgaatatt 2624
Query: 2530 gattgtgtggagcatttagaccctgctggcacaggctcgttttataatgatggagaagca 2589
|| |||| ||||||||||||||||||||| ||||| || |||||||| |||| || |||
Sbjct: 2625 gactgtgaggagcatttagaccctgctggtacaggatctttttataacaatggcgaggca 2684
Query: 2590 gacatagttacacagcatgttctcaatcttgtgcattgtggagtgtctccaagtgagata 2649
|| ||||| ||||||||||| | || ||||| || ||||| || ||||||| | |||
Sbjct: 2685 gatgtagtttcacagcatgttttgaaccttgtacaatgtggtgtctctccaaccgcgatt 2744
Query: 2650 gccatccagtcaccctacattgctcaggttcaattgttgagagagaagatagaagaatat 2709
||| |||||||||| |||||||| || || ||| | || ||||| | | ||||||| |||
Sbjct: 2745 gccgtccagtcaccttacattgcgcaagtacaactattaagagacaggctagaagattat 2804
Query: 2710 ccagggctttctggggttgaggtttcaacagtagatagctttcaagggagggaggcagat 2769
|||| | |||||| |||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 2805 ccagaggcttctggtgttgaggtttcaactatagatagcttccaagggagggaggcagat 2864
Query: 2770 gcggtggtcctatcaatggttcggtcaaacccactgggagcggtagggttcatgggcgac 2829
|| |||||| ||||||||||||| |||||| | ||||||| ||||| ||| | ||||||
Sbjct: 2865 gccgtggtcatatcaatggttcgttcaaacactttgggagctgtaggattccttggcgac 2924
Query: 2830 agcaggctgatgaatgtggctatcacaagggcccgccgacatgtc 2874
| ||||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 2925 aacaggcgcatgaatgtggccatcacaagggcacgccgtcatgtc 2969
Score = 204 bits (103), Expect = 2e-48
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 1051 ccagttgagtacttggtgacccatgggcaggctcagcaggagcagtgtgacaccatttgc 1110
||||| |||||||| || || ||||||||| | ||||| |||||||| || |||||||||
Sbjct: 1140 ccagtagagtacttagtcactcatgggcagtcacagcaagagcagtgcgataccatttgc 1199
Query: 1111 aacttgagtgtcatcagcagctcaactggattgggaggcttgcatttggttctattcaga 1170
|| |||| ||| |||||||| |||||||| |||| ||| |||| |||| ||||| |||
Sbjct: 1200 aatttgaatgttatcagcagttcaactgggttggatggccagcatctggtcctatttaga 1259
Query: 1171 attgaaggtgaacacaagctgcctccaactacactgtcacctggggacatggtttgtgtg 1230
| ||| | | || | |||||||||| ||||| || |||||||| ||||||||| |
Sbjct: 1260 gtgaaagataaccatagattgcctccaaccacactctctcctggggatatggtttgtatc 1319
Query: 1231 agaacatgtaatagccgtggtgagggagccacttcttgcatgcaaggctttctttataat 1290
|| |||||| ||| ||| || || |||| |||||||||||||||||| | ||||||
Sbjct: 1320 aggacatgtgataaccggggggaaattaccacatcttgcatgcaaggctttatatataat 1379
Query: 1291 ctcggggaggatggttgcagcataactgtggctctggaatctcgccatggtgacccaact 1350
|| || ||||||||||||||||| || ||| | ||| |||| |||| |||||| || ||
Sbjct: 1380 cttggtgaggatggttgcagcattaccgtgacactgaaatcccgccgtggtgatcctacg 1439
Query: 1351 ttctccaggttatttgggaaaagtgtgcgcattgaccggatacagggattggctgatgca 1410
||||||| | | |||||||||| |||||| |||||| |||| |||| ||||||||| |||
Sbjct: 1440 ttctccaagctttttgggaaaaatgtgcggattgacaggattcaggcattggctgacgca 1499
Query: 1411 cttacttacgagcggaatcttgaagcattgatgctacttcaaaggaatggtttgctgaaa 1470
||||| || ||||| ||| ||||||| ||||||| ||||||||||| ||||| | ||||
Sbjct: 1500 cttacatatgagcgaaattgtgaagcactgatgcttcttcaaaggaaaggtttacagaaa 1559
Query: 1471 agtaatgcttccattgatgtggtagctactctgtt 1505
| ||| ||||||||| || ||||| ||||||||
Sbjct: 1560 aagaattcttccattggagtagtagccactctgtt 1594
Score = 111 bits (56), Expect = 2e-20
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 1603 tttgatgactcccaattaagggctctctcattaggcctgaacaagaagaggcctgtttta 1662
||||||| |||||| |||| ||| || || ||||| ||||||| || |||||||| ||
Sbjct: 1698 tttgatgcctcccagttaaaagctatcacactaggcttgaacaacaaaaggcctgtccta 1757
Query: 1663 gtcatccaggggcctcctggcacgggcaagacagttttgctcacggaactcattgtacgt 1722
| ||||| || |||||||||||||||||||| | |||||| | | ||||||| | ||
Sbjct: 1758 ataatccaaggacctcctggcacgggcaagactggtttgcttagttatctcattgcatgt 1817
Query: 1723 gctgtccggcagggtgaaaatgtccttgtgacagctccaagcaatgcggcagtcgataac 1782
|||||||| |||||||| || || || || |||||||||||||| ||||| ||||||
Sbjct: 1818 gctgtccgaaagggtgaacgcgttctcgtaactgctccaagcaatgcagcagttgataac 1877
Query: 1783 atggttgaaaagttatcaagtactggcttaaacattgtgcgagttggaaaccctgctcgg 1842
||||| || ||||| ||| |||||| | ||| || ||||||||||| |||||| ||
Sbjct: 1878 atggtggagaagttgtcagatactggactggacacagtacgagttggaaatcctgctagg 1937
Query: 1843 atatcaccatcagttacttcgaagtccttggcagagattgtgaa 1886
||||| ||||| ||| |||| | |||||||| |||| |||||||
Sbjct: 1938 atatctccatctgttgcttcaaggtccttgggagagcttgtgaa 1981
Score = 85.7 bits (43), Expect = 1e-12
Identities = 124/151 (82%)
Strand = Plus / Plus
Query: 2092 ggggcagccgatccacttatcaggaaaattggttgctttgacttggtaattatagatgaa 2151
|||||||| || |||||| | |||| ||||||||||||||||| |||||||| ||||||
Sbjct: 2187 ggggcagctgacccacttgtgaggaggattggttgctttgacttagtaattattgatgaa 2246
Query: 2152 gcaggtcaaggaattgagccctcttgctggattcccatactgcaggggaaacgttgtatt 2211
||||| |||| ||| || ||||| |||||||| || || | || || ||| | || |||
Sbjct: 2247 gcaggacaagcaatcgaaccctcatgctggatccctatcttacaaggaaaaagatgcatt 2306
Query: 2212 cttgctggtgatcattgccaacttgcacctg 2242
|||||||||||||| | || ||||||||||
Sbjct: 2307 cttgctggtgatcaacggcagcttgcacctg 2337
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 928 attgaagactttgtgaggcatatgtcagacctgctacgcatcgagcgagacgcggagctg 987
|||||||||||||| | | | ||||||||||| |||| || || ||||| |||||||||
Sbjct: 1014 attgaagactttgtcaagaaaatgtcagaccttctacatatagaacgagatgcggagctg 1073
Query: 988 gagtttacacaggaggagctgaatgccac 1016
||||||||||| || || |||||||||||
Sbjct: 1074 gagtttacacaagaagaactgaatgccac 1102
Score = 63.9 bits (32), Expect = 4e-06
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 625 gcacagccttatctctcacccgtccccatgcccaagggtctggaggcactctgcttcaag 684
|||||||||||||| ||| | | |||||||||||||| | |||||| |||||| |||||
Sbjct: 717 gcacagccttatctatcagcaattcccatgcccaagggacaggaggcgctctgcctcaag 776
Query: 685 gcctgtacacactaccccacccttttcgacca 716
|||| ||| ||||| || ||||| || |||||
Sbjct: 777 gcctctactcactatcctaccctctttgacca 808
Score = 52.0 bits (26), Expect = 0.014
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 1933 gacttaagaaaggacttgagggactgcatagaggacgattctttagcagcaggcattcgt 1992
||||| ||||||||||||| | | |||||| |||| ||| | ||||| ||||| || |||
Sbjct: 2028 gacttgagaaaggacttgaagcattgcatacaggatgatacattagccgcaggtatacgt 2087
Query: 1993 caacttctgaagcaacttggga 2014
||||| ||||||| |||||||
Sbjct: 2088 caactgttgaagcagcttggga 2109
>dbj|AK066693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074M06, full
insert sequence
Length = 3461
Score = 272 bits (137), Expect = 8e-69
Identities = 428/525 (81%)
Strand = Plus / Plus
Query: 2350 agaatgcatgattcaatagccagttgggcatctaaagagatgtatcaggggttactccag 2409
||||||||||||||||| ||||||||||||||||| ||||||||| | || || ||| |
Sbjct: 2446 agaatgcatgattcaattgccagttgggcatctaacgagatgtatgatggttttctcaaa 2505
Query: 2410 tcttctcattctgtagcttcacatcttcttgccgactctccagttgtaaaggatacttgg 2469
|| || | || || ||||| ||||||||||| || | ||| || | ||||| ||||||
Sbjct: 2506 tcctccccatccgttgcttctcatcttcttgctgattacccatttatcaaggaaacttgg 2565
Query: 2470 ataactcggtgcccactgcttctacttgatacccgaatgccatatggaattctaaatgct 2529
||||||||||| | | ||| ||||||| || || ||||| || |||| | | ||| |
Sbjct: 2566 ataactcggtgtgcctttcttttacttgacactcgtatgccgtacggaagtttgaatatt 2625
Query: 2530 gattgtgtggagcatttagaccctgctggcacaggctcgttttataatgatggagaagca 2589
|| |||| ||||||||||||||||||||| ||||| || |||||||| |||| || |||
Sbjct: 2626 gactgtgaggagcatttagaccctgctggtacaggatctttttataacaatggcgaggca 2685
Query: 2590 gacatagttacacagcatgttctcaatcttgtgcattgtggagtgtctccaagtgagata 2649
|| ||||| ||||||||||| | || ||||| || ||||| || ||||||| | |||
Sbjct: 2686 gatgtagtttcacagcatgttttgaaccttgtacaatgtggtgtctctccaaccgcgatt 2745
Query: 2650 gccatccagtcaccctacattgctcaggttcaattgttgagagagaagatagaagaatat 2709
||| |||||||||| |||||||| || || ||| | || ||||| | | ||||||| |||
Sbjct: 2746 gccgtccagtcaccttacattgcgcaagtacaactattaagagacaggctagaagattat 2805
Query: 2710 ccagggctttctggggttgaggtttcaacagtagatagctttcaagggagggaggcagat 2769
|||| | |||||| |||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 2806 ccagaggcttctggtgttgaggtttcaactatagatagcttccaagggagggaggcagat 2865
Query: 2770 gcggtggtcctatcaatggttcggtcaaacccactgggagcggtagggttcatgggcgac 2829
|| |||||| ||||||||||||| |||||| | ||||||| ||||| ||| | ||||||
Sbjct: 2866 gccgtggtcatatcaatggttcgttcaaacactttgggagctgtaggattccttggcgac 2925
Query: 2830 agcaggctgatgaatgtggctatcacaagggcccgccgacatgtc 2874
| ||||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 2926 aacaggcgcatgaatgtggccatcacaagggcacgccgtcatgtc 2970
Score = 204 bits (103), Expect = 2e-48
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 1051 ccagttgagtacttggtgacccatgggcaggctcagcaggagcagtgtgacaccatttgc 1110
||||| |||||||| || || ||||||||| | ||||| |||||||| || |||||||||
Sbjct: 1141 ccagtagagtacttagtcactcatgggcagtcacagcaagagcagtgcgataccatttgc 1200
Query: 1111 aacttgagtgtcatcagcagctcaactggattgggaggcttgcatttggttctattcaga 1170
|| |||| ||| |||||||| |||||||| |||| ||| |||| |||| ||||| |||
Sbjct: 1201 aatttgaatgttatcagcagttcaactgggttggatggccagcatctggtcctatttaga 1260
Query: 1171 attgaaggtgaacacaagctgcctccaactacactgtcacctggggacatggtttgtgtg 1230
| ||| | | || | |||||||||| ||||| || |||||||| ||||||||| |
Sbjct: 1261 gtgaaagataaccatagattgcctccaaccacactctctcctggggatatggtttgtatc 1320
Query: 1231 agaacatgtaatagccgtggtgagggagccacttcttgcatgcaaggctttctttataat 1290
|| |||||| ||| ||| || || |||| |||||||||||||||||| | ||||||
Sbjct: 1321 aggacatgtgataaccggggggaaattaccacatcttgcatgcaaggctttatatataat 1380
Query: 1291 ctcggggaggatggttgcagcataactgtggctctggaatctcgccatggtgacccaact 1350
|| || ||||||||||||||||| || ||| | ||| |||| |||| |||||| || ||
Sbjct: 1381 cttggtgaggatggttgcagcattaccgtgacactgaaatcccgccgtggtgatcctacg 1440
Query: 1351 ttctccaggttatttgggaaaagtgtgcgcattgaccggatacagggattggctgatgca 1410
||||||| | | |||||||||| |||||| |||||| |||| |||| ||||||||| |||
Sbjct: 1441 ttctccaagctttttgggaaaaatgtgcggattgacaggattcaggcattggctgacgca 1500
Query: 1411 cttacttacgagcggaatcttgaagcattgatgctacttcaaaggaatggtttgctgaaa 1470
||||| || ||||| ||| ||||||| ||||||| ||||||||||| ||||| | ||||
Sbjct: 1501 cttacatatgagcgaaattgtgaagcactgatgcttcttcaaaggaaaggtttacagaaa 1560
Query: 1471 agtaatgcttccattgatgtggtagctactctgtt 1505
| ||| ||||||||| || ||||| ||||||||
Sbjct: 1561 aagaattcttccattggagtagtagccactctgtt 1595
Score = 111 bits (56), Expect = 2e-20
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 1603 tttgatgactcccaattaagggctctctcattaggcctgaacaagaagaggcctgtttta 1662
||||||| |||||| |||| ||| || || ||||| ||||||| || |||||||| ||
Sbjct: 1699 tttgatgcctcccagttaaaagctatcacactaggcttgaacaacaaaaggcctgtccta 1758
Query: 1663 gtcatccaggggcctcctggcacgggcaagacagttttgctcacggaactcattgtacgt 1722
| ||||| || |||||||||||||||||||| | |||||| | | ||||||| | ||
Sbjct: 1759 ataatccaaggacctcctggcacgggcaagactggtttgcttagttatctcattgcatgt 1818
Query: 1723 gctgtccggcagggtgaaaatgtccttgtgacagctccaagcaatgcggcagtcgataac 1782
|||||||| |||||||| || || || || |||||||||||||| ||||| ||||||
Sbjct: 1819 gctgtccgaaagggtgaacgcgttctcgtaactgctccaagcaatgcagcagttgataac 1878
Query: 1783 atggttgaaaagttatcaagtactggcttaaacattgtgcgagttggaaaccctgctcgg 1842
||||| || ||||| ||| |||||| | ||| || ||||||||||| |||||| ||
Sbjct: 1879 atggtggagaagttgtcagatactggactggacacagtacgagttggaaatcctgctagg 1938
Query: 1843 atatcaccatcagttacttcgaagtccttggcagagattgtgaa 1886
||||| ||||| ||| |||| | |||||||| |||| |||||||
Sbjct: 1939 atatctccatctgttgcttcaaggtccttgggagagcttgtgaa 1982
Score = 85.7 bits (43), Expect = 1e-12
Identities = 124/151 (82%)
Strand = Plus / Plus
Query: 2092 ggggcagccgatccacttatcaggaaaattggttgctttgacttggtaattatagatgaa 2151
|||||||| || |||||| | |||| ||||||||||||||||| |||||||| ||||||
Sbjct: 2188 ggggcagctgacccacttgtgaggaggattggttgctttgacttagtaattattgatgaa 2247
Query: 2152 gcaggtcaaggaattgagccctcttgctggattcccatactgcaggggaaacgttgtatt 2211
||||| |||| ||| || ||||| |||||||| || || | || || ||| | || |||
Sbjct: 2248 gcaggacaagcaatcgaaccctcatgctggatccctatcttacaaggaaaaagatgcatt 2307
Query: 2212 cttgctggtgatcattgccaacttgcacctg 2242
|||||||||||||| | || ||||||||||
Sbjct: 2308 cttgctggtgatcaacggcagcttgcacctg 2338
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 928 attgaagactttgtgaggcatatgtcagacctgctacgcatcgagcgagacgcggagctg 987
|||||||||||||| | | | ||||||||||| |||| || || ||||| |||||||||
Sbjct: 1015 attgaagactttgtcaagaaaatgtcagaccttctacatatagaacgagatgcggagctg 1074
Query: 988 gagtttacacaggaggagctgaatgccac 1016
||||||||||| || || |||||||||||
Sbjct: 1075 gagtttacacaagaagaactgaatgccac 1103
Score = 63.9 bits (32), Expect = 4e-06
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 625 gcacagccttatctctcacccgtccccatgcccaagggtctggaggcactctgcttcaag 684
|||||||||||||| ||| | | |||||||||||||| | |||||| |||||| |||||
Sbjct: 718 gcacagccttatctatcagcaattcccatgcccaagggacaggaggcgctctgcctcaag 777
Query: 685 gcctgtacacactaccccacccttttcgacca 716
|||| ||| ||||| || ||||| || |||||
Sbjct: 778 gcctctactcactatcctaccctctttgacca 809
Score = 52.0 bits (26), Expect = 0.014
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 1933 gacttaagaaaggacttgagggactgcatagaggacgattctttagcagcaggcattcgt 1992
||||| ||||||||||||| | | |||||| |||| ||| | ||||| ||||| || |||
Sbjct: 2029 gacttgagaaaggacttgaagcattgcatacaggatgatacattagccgcaggtatacgt 2088
Query: 1993 caacttctgaagcaacttggga 2014
||||| ||||||| |||||||
Sbjct: 2089 caactgttgaagcagcttggga 2110
>dbj|AK069947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036L18, full
insert sequence
Length = 3066
Score = 214 bits (108), Expect = 2e-51
Identities = 357/440 (81%)
Strand = Plus / Plus
Query: 2350 agaatgcatgattcaatagccagttgggcatctaaagagatgtatcaggggttactccag 2409
||||||||||||||||| ||||||||||||||||| ||||||||| | || || ||| |
Sbjct: 2504 agaatgcatgattcaattgccagttgggcatctaacgagatgtatgatggttttctcaaa 2563
Query: 2410 tcttctcattctgtagcttcacatcttcttgccgactctccagttgtaaaggatacttgg 2469
|| || | || || ||||| ||||||||||| || | ||| || | ||||| ||||||
Sbjct: 2564 tcctccccatccgttgcttctcatcttcttgctgattacccatttatcaaggaaacttgg 2623
Query: 2470 ataactcggtgcccactgcttctacttgatacccgaatgccatatggaattctaaatgct 2529
||||||||||| | | ||| ||||||| || || ||||| || |||| | | ||| |
Sbjct: 2624 ataactcggtgtgcctttcttttacttgacactcgtatgccgtacggaagtttgaatatt 2683
Query: 2530 gattgtgtggagcatttagaccctgctggcacaggctcgttttataatgatggagaagca 2589
|| |||| ||||||||||||||||||||| ||||| || |||||||| |||| || |||
Sbjct: 2684 gactgtgaggagcatttagaccctgctggtacaggatctttttataacaatggcgaggca 2743
Query: 2590 gacatagttacacagcatgttctcaatcttgtgcattgtggagtgtctccaagtgagata 2649
|| ||||| ||||||||||| | || ||||| || ||||| || ||||||| | |||
Sbjct: 2744 gatgtagtttcacagcatgttttgaaccttgtacaatgtggtgtctctccaaccgcgatt 2803
Query: 2650 gccatccagtcaccctacattgctcaggttcaattgttgagagagaagatagaagaatat 2709
||| |||||||||| |||||||| || || ||| | || ||||| | | ||||||| |||
Sbjct: 2804 gccgtccagtcaccttacattgcgcaagtacaactattaagagacaggctagaagattat 2863
Query: 2710 ccagggctttctggggttgaggtttcaacagtagatagctttcaagggagggaggcagat 2769
|||| | |||||| |||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 2864 ccagaggcttctggtgttgaggtttcaactatagatagcttccaagggagggaggcagat 2923
Query: 2770 gcggtggtcctatcaatggt 2789
|| |||||| ||||||||||
Sbjct: 2924 gccgtggtcatatcaatggt 2943
Score = 190 bits (96), Expect = 2e-44
Identities = 367/456 (80%), Gaps = 1/456 (0%)
Strand = Plus / Plus
Query: 1051 ccagttgagtacttggtgacccatgggcaggctcagcaggagcagtgtgacaccatttgc 1110
||||| |||||||| || || ||||||||| | ||||| |||||||| || |||||||||
Sbjct: 1198 ccagtagagtacttagtcactcatgggcagtcacagcaagagcagtgcgataccatttgc 1257
Query: 1111 aacttgagtgtcatcagcagctcaactggattgggaggcttgcatttggttctattcaga 1170
|| |||| ||| |||||||| |||||||| |||| ||| |||| |||| ||||| |||
Sbjct: 1258 aatttgaatgttatcagcagttcaactgggttggatggccagcatctggtcctatttaga 1317
Query: 1171 attgaaggtgaacacaagctgcctccaactacactgtcacctggggacatggtttgtgtg 1230
| ||| | | || | |||||||||| ||||| || |||||||| ||||||||| |
Sbjct: 1318 gtgaaagataaccatagattgcctccaaccacactctctcctggggatatggtttgtatc 1377
Query: 1231 agaacatgtaatagccgtggtgagggagccacttcttgcatgcaaggctttctttataat 1290
|| |||||| ||| ||| || || |||| |||||||||||||||||| | ||||||
Sbjct: 1378 aggacatgtgataaccggggggaaattaccacatcttgcatgcaaggctttatatataat 1437
Query: 1291 ctcggggaggatggttgcagcataactgtggctctggaatctcgccatggtgacccaact 1350
|| || ||||||||||||||||| || ||| | ||| |||| |||| |||||| || ||
Sbjct: 1438 cttggtgaggatggttgcagcattaccgtgacactgaaatcccgccgtggtgatcctacg 1497
Query: 1351 ttctccaggttatttgggaaaagtgtgcgcattgaccggatacagggattggctgatgca 1410
||||||| | | |||||||||| |||||| |||||| |||| |||| ||||||||| |||
Sbjct: 1498 ttctccaagctttttgggaaaaatgtgcggattgacaggattcaggcattggctgacgca 1557
Query: 1411 cttacttacgagcggaatcttgaagcattgatgctac-ttcaaaggaatggtttgctgaa 1469
||||| || ||||| ||| ||||||| ||||||| | |||||||||| ||||| | |||
Sbjct: 1558 cttacatatgagcgaaattgtgaagcactgatgcttctttcaaaggaaaggtttacagaa 1617
Query: 1470 aagtaatgcttccattgatgtggtagctactctgtt 1505
|| ||| ||||||||| || ||||| ||||||||
Sbjct: 1618 aaagaattcttccattggagtagtagccactctgtt 1653
Score = 111 bits (56), Expect = 2e-20
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 1603 tttgatgactcccaattaagggctctctcattaggcctgaacaagaagaggcctgtttta 1662
||||||| |||||| |||| ||| || || ||||| ||||||| || |||||||| ||
Sbjct: 1757 tttgatgcctcccagttaaaagctatcacactaggcttgaacaacaaaaggcctgtccta 1816
Query: 1663 gtcatccaggggcctcctggcacgggcaagacagttttgctcacggaactcattgtacgt 1722
| ||||| || |||||||||||||||||||| | |||||| | | ||||||| | ||
Sbjct: 1817 ataatccaaggacctcctggcacgggcaagactggtttgcttagttatctcattgcatgt 1876
Query: 1723 gctgtccggcagggtgaaaatgtccttgtgacagctccaagcaatgcggcagtcgataac 1782
|||||||| |||||||| || || || || |||||||||||||| ||||| ||||||
Sbjct: 1877 gctgtccgaaagggtgaacgcgttctcgtaactgctccaagcaatgcagcagttgataac 1936
Query: 1783 atggttgaaaagttatcaagtactggcttaaacattgtgcgagttggaaaccctgctcgg 1842
||||| || ||||| ||| |||||| | ||| || ||||||||||| |||||| ||
Sbjct: 1937 atggtggagaagttgtcagatactggactggacacagtacgagttggaaatcctgctagg 1996
Query: 1843 atatcaccatcagttacttcgaagtccttggcagagattgtgaa 1886
||||| ||||| ||| |||| | |||||||| |||| |||||||
Sbjct: 1997 atatctccatctgttgcttcaaggtccttgggagagcttgtgaa 2040
Score = 85.7 bits (43), Expect = 1e-12
Identities = 124/151 (82%)
Strand = Plus / Plus
Query: 2092 ggggcagccgatccacttatcaggaaaattggttgctttgacttggtaattatagatgaa 2151
|||||||| || |||||| | |||| ||||||||||||||||| |||||||| ||||||
Sbjct: 2246 ggggcagctgacccacttgtgaggaggattggttgctttgacttagtaattattgatgaa 2305
Query: 2152 gcaggtcaaggaattgagccctcttgctggattcccatactgcaggggaaacgttgtatt 2211
||||| |||| ||| || ||||| |||||||| || || | || || ||| | || |||
Sbjct: 2306 gcaggacaagcaatcgaaccctcatgctggatccctatcttacaaggaaaaagatgcatt 2365
Query: 2212 cttgctggtgatcattgccaacttgcacctg 2242
|||||||||||||| | || ||||||||||
Sbjct: 2366 cttgctggtgatcaacggcagcttgcacctg 2396
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 928 attgaagactttgtgaggcatatgtcagacctgctacgcatcgagcgagacgcggagctg 987
|||||||||||||| | | | ||||||||||| |||| || || ||||| |||||||||
Sbjct: 1072 attgaagactttgtcaagaaaatgtcagaccttctacatatagaacgagatgcggagctg 1131
Query: 988 gagtttacacaggaggagctgaatgccac 1016
||||||||||| || || |||||||||||
Sbjct: 1132 gagtttacacaagaagaactgaatgccac 1160
Score = 63.9 bits (32), Expect = 4e-06
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 625 gcacagccttatctctcacccgtccccatgcccaagggtctggaggcactctgcttcaag 684
|||||||||||||| ||| | | |||||||||||||| | |||||| |||||| |||||
Sbjct: 775 gcacagccttatctatcagcaattcccatgcccaagggacaggaggcgctctgcctcaag 834
Query: 685 gcctgtacacactaccccacccttttcgacca 716
|||| ||| ||||| || ||||| || |||||
Sbjct: 835 gcctctactcactatcctaccctctttgacca 866
Score = 52.0 bits (26), Expect = 0.014
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 1933 gacttaagaaaggacttgagggactgcatagaggacgattctttagcagcaggcattcgt 1992
||||| ||||||||||||| | | |||||| |||| ||| | ||||| ||||| || |||
Sbjct: 2087 gacttgagaaaggacttgaagcattgcatacaggatgatacattagccgcaggtatacgt 2146
Query: 1993 caacttctgaagcaacttggga 2014
||||| ||||||| |||||||
Sbjct: 2147 caactgttgaagcagcttggga 2168
>dbj|AK099972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127P19, full
insert sequence
Length = 2114
Score = 204 bits (103), Expect = 2e-48
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 1051 ccagttgagtacttggtgacccatgggcaggctcagcaggagcagtgtgacaccatttgc 1110
||||| |||||||| || || ||||||||| | ||||| |||||||| || |||||||||
Sbjct: 1137 ccagtagagtacttagtcactcatgggcagtcacagcaagagcagtgcgataccatttgc 1196
Query: 1111 aacttgagtgtcatcagcagctcaactggattgggaggcttgcatttggttctattcaga 1170
|| |||| ||| |||||||| |||||||| |||| ||| |||| |||| ||||| |||
Sbjct: 1197 aatttgaatgttatcagcagttcaactgggttggatggccagcatctggtcctatttaga 1256
Query: 1171 attgaaggtgaacacaagctgcctccaactacactgtcacctggggacatggtttgtgtg 1230
| ||| | | || | |||||||||| ||||| || |||||||| ||||||||| |
Sbjct: 1257 gtgaaagataaccatagattgcctccaaccacactctctcctggggatatggtttgtatc 1316
Query: 1231 agaacatgtaatagccgtggtgagggagccacttcttgcatgcaaggctttctttataat 1290
|| |||||| ||| ||| || || |||| |||||||||||||||||| | ||||||
Sbjct: 1317 aggacatgtgataaccggggggaaattaccacatcttgcatgcaaggctttatatataat 1376
Query: 1291 ctcggggaggatggttgcagcataactgtggctctggaatctcgccatggtgacccaact 1350
|| || ||||||||||||||||| || ||| | ||| |||| |||| |||||| || ||
Sbjct: 1377 cttggtgaggatggttgcagcattaccgtgacactgaaatcccgccgtggtgatcctacg 1436
Query: 1351 ttctccaggttatttgggaaaagtgtgcgcattgaccggatacagggattggctgatgca 1410
||||||| | | |||||||||| |||||| |||||| |||| |||| ||||||||| |||
Sbjct: 1437 ttctccaagctttttgggaaaaatgtgcggattgacaggattcaggcattggctgacgca 1496
Query: 1411 cttacttacgagcggaatcttgaagcattgatgctacttcaaaggaatggtttgctgaaa 1470
||||| || ||||| ||| ||||||| ||||||| ||||||||||| ||||| | ||||
Sbjct: 1497 cttacatatgagcgaaattgtgaagcactgatgcttcttcaaaggaaaggtttacagaaa 1556
Query: 1471 agtaatgcttccattgatgtggtagctactctgtt 1505
| ||| ||||||||| || ||||| ||||||||
Sbjct: 1557 aagaattcttccattggagtagtagccactctgtt 1591
Score = 111 bits (56), Expect = 2e-20
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 1603 tttgatgactcccaattaagggctctctcattaggcctgaacaagaagaggcctgtttta 1662
||||||| |||||| |||| ||| || || ||||| ||||||| || |||||||| ||
Sbjct: 1695 tttgatgcctcccagttaaaagctatcacactaggcttgaacaacaaaaggcctgtccta 1754
Query: 1663 gtcatccaggggcctcctggcacgggcaagacagttttgctcacggaactcattgtacgt 1722
| ||||| || |||||||||||||||||||| | |||||| | | ||||||| | ||
Sbjct: 1755 ataatccaaggacctcctggcacgggcaagactggtttgcttagttatctcattgcatgt 1814
Query: 1723 gctgtccggcagggtgaaaatgtccttgtgacagctccaagcaatgcggcagtcgataac 1782
|||||||| |||||||| || || || || |||||||||||||| ||||| ||||||
Sbjct: 1815 gctgtccgaaagggtgaacgcgttctcgtaactgctccaagcaatgcagcagttgataac 1874
Query: 1783 atggttgaaaagttatcaagtactggcttaaacattgtgcgagttggaaaccctgctcgg 1842
||||| || ||||| ||| |||||| | ||| || ||||||||||| |||||| ||
Sbjct: 1875 atggtggagaagttgtcagatactggactggacacagtacgagttggaaatcctgctagg 1934
Query: 1843 atatcaccatcagttacttcgaagtccttggcagagattgtgaa 1886
||||| ||||| ||| |||| | |||||||| |||| |||||||
Sbjct: 1935 atatctccatctgttgcttcaaggtccttgggagagcttgtgaa 1978
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 928 attgaagactttgtgaggcatatgtcagacctgctacgcatcgagcgagacgcggagctg 987
|||||||||||||| | | | ||||||||||| |||| || || ||||| |||||||||
Sbjct: 1011 attgaagactttgtcaagaaaatgtcagaccttctacatatagaacgagatgcggagctg 1070
Query: 988 gagtttacacaggaggagctgaatgccac 1016
||||||||||| || || |||||||||||
Sbjct: 1071 gagtttacacaagaagaactgaatgccac 1099
Score = 63.9 bits (32), Expect = 4e-06
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 625 gcacagccttatctctcacccgtccccatgcccaagggtctggaggcactctgcttcaag 684
|||||||||||||| ||| | | |||||||||||||| | |||||| |||||| |||||
Sbjct: 714 gcacagccttatctatcagcaattcccatgcccaagggacaggaggcgctctgcctcaag 773
Query: 685 gcctgtacacactaccccacccttttcgacca 716
|||| ||| ||||| || ||||| || |||||
Sbjct: 774 gcctctactcactatcctaccctctttgacca 805
Score = 52.0 bits (26), Expect = 0.014
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 1933 gacttaagaaaggacttgagggactgcatagaggacgattctttagcagcaggcattcgt 1992
||||| ||||||||||||| | | |||||| |||| ||| | ||||| ||||| || |||
Sbjct: 2025 gacttgagaaaggacttgaagcattgcatacaggatgatacattagccgcaggtatacgt 2084
Query: 1993 caacttctgaagcaacttggga 2014
||||| ||||||| |||||||
Sbjct: 2085 caactgttgaagcagcttggga 2106
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
Length = 22696651
Score = 131 bits (66), Expect = 2e-26
Identities = 186/226 (82%)
Strand = Plus / Minus
Query: 1190 tgcctccaactacactgtcacctggggacatggtttgtgtgagaacatgtaatagccgtg 1249
|||||||||| ||||| || |||||||| ||||||||| | || |||||| ||| ||| |
Sbjct: 2306024 tgcctccaaccacactctctcctggggatatggtttgtatcaggacatgtgataaccggg 2305965
Query: 1250 gtgagggagccacttcttgcatgcaaggctttctttataatctcggggaggatggttgca 1309
| || |||| |||||||||||||||||| | |||||||| || |||||||||||||
Sbjct: 2305964 gggaaattaccacatcttgcatgcaaggctttatatataatcttggtgaggatggttgca 2305905
Query: 1310 gcataactgtggctctggaatctcgccatggtgacccaactttctccaggttatttggga 1369
|||| || ||| | ||| |||| |||| |||||| || || ||||||| | | |||||||
Sbjct: 2305904 gcattaccgtgacactgaaatcccgccgtggtgatcctacgttctccaagctttttggga 2305845
Query: 1370 aaagtgtgcgcattgaccggatacagggattggctgatgcacttac 1415
||| |||||| |||||| |||| |||| ||||||||| ||||||||
Sbjct: 2305844 aaaatgtgcggattgacaggattcaggcattggctgacgcacttac 2305799
Score = 111 bits (56), Expect = 2e-20
Identities = 116/136 (85%)
Strand = Plus / Minus
Query: 2654 tccagtcaccctacattgctcaggttcaattgttgagagagaagatagaagaatatccag 2713
|||||||||| |||||||| || || ||| | || ||||| | | ||||||| |||||||
Sbjct: 2302467 tccagtcaccttacattgcgcaagtacaactattaagagacaggctagaagattatccag 2302408
Query: 2714 ggctttctggggttgaggtttcaacagtagatagctttcaagggagggaggcagatgcgg 2773
| |||||| |||||||||||||| |||||||||| |||||||||||||||||||| |
Sbjct: 2302407 aggcttctggtgttgaggtttcaactatagatagcttccaagggagggaggcagatgccg 2302348
Query: 2774 tggtcctatcaatggt 2789
||||| ||||||||||
Sbjct: 2302347 tggtcatatcaatggt 2302332
Score = 111 bits (56), Expect = 2e-20
Identities = 227/284 (79%)
Strand = Plus / Minus
Query: 1603 tttgatgactcccaattaagggctctctcattaggcctgaacaagaagaggcctgtttta 1662
||||||| |||||| |||| ||| || || ||||| ||||||| || |||||||| ||
Sbjct: 2304653 tttgatgcctcccagttaaaagctatcacactaggcttgaacaacaaaaggcctgtccta 2304594
Query: 1663 gtcatccaggggcctcctggcacgggcaagacagttttgctcacggaactcattgtacgt 1722
| ||||| || |||||||||||||||||||| | |||||| | | ||||||| | ||
Sbjct: 2304593 ataatccaaggacctcctggcacgggcaagactggtttgcttagttatctcattgcatgt 2304534
Query: 1723 gctgtccggcagggtgaaaatgtccttgtgacagctccaagcaatgcggcagtcgataac 1782
|||||||| |||||||| || || || || |||||||||||||| ||||| ||||||
Sbjct: 2304533 gctgtccgaaagggtgaacgcgttctcgtaactgctccaagcaatgcagcagttgataac 2304474
Query: 1783 atggttgaaaagttatcaagtactggcttaaacattgtgcgagttggaaaccctgctcgg 1842
||||| || ||||| ||| |||||| | ||| || ||||||||||| |||||| ||
Sbjct: 2304473 atggtggagaagttgtcagatactggactggacacagtacgagttggaaatcctgctagg 2304414
Query: 1843 atatcaccatcagttacttcgaagtccttggcagagattgtgaa 1886
||||| ||||| ||| |||| | |||||||| |||| |||||||
Sbjct: 2304413 atatctccatctgttgcttcaaggtccttgggagagcttgtgaa 2304370
Score = 85.7 bits (43), Expect = 1e-12
Identities = 124/151 (82%)
Strand = Plus / Minus
Query: 2092 ggggcagccgatccacttatcaggaaaattggttgctttgacttggtaattatagatgaa 2151
|||||||| || |||||| | |||| ||||||||||||||||| |||||||| ||||||
Sbjct: 2304164 ggggcagctgacccacttgtgaggaggattggttgctttgacttagtaattattgatgaa 2304105
Query: 2152 gcaggtcaaggaattgagccctcttgctggattcccatactgcaggggaaacgttgtatt 2211
||||| |||| ||| || ||||| |||||||| || || | || || ||| | || |||
Sbjct: 2304104 gcaggacaagcaatcgaaccctcatgctggatccctatcttacaaggaaaaagatgcatt 2304045
Query: 2212 cttgctggtgatcattgccaacttgcacctg 2242
|||||||||||||| | || ||||||||||
Sbjct: 2304044 cttgctggtgatcaacggcagcttgcacctg 2304014
Score = 73.8 bits (37), Expect = 4e-09
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 2350 agaatgcatgattcaatagccagttgggcatctaaagagatgtat 2394
||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2303906 agaatgcatgattcaattgccagttgggcatctaacgagatgtat 2303862
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 1051 ccagttgagtacttggtgacccatgggcaggctcagcaggagcagtgtgacaccatttgc 1110
||||| |||||||| || || ||||||||| | ||||| |||||||| || |||||||||
Sbjct: 2306405 ccagtagagtacttagtcactcatgggcagtcacagcaagagcagtgcgataccatttgc 2306346
Query: 1111 aacttgagtgtcatcagcagctcaactgg 1139
|| |||| ||| |||||||| ||||||||
Sbjct: 2306345 aatttgaatgttatcagcagttcaactgg 2306317
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 928 attgaagactttgtgaggcatatgtcagacctgctacgcatcgagcgagacgcggagctg 987
|||||||||||||| | | | ||||||||||| |||| || || ||||| |||||||||
Sbjct: 2306531 attgaagactttgtcaagaaaatgtcagaccttctacatatagaacgagatgcggagctg 2306472
Query: 988 gagtttacacaggaggagctgaatgccac 1016
||||||||||| || || |||||||||||
Sbjct: 2306471 gagtttacacaagaagaactgaatgccac 2306443
Score = 71.9 bits (36), Expect = 2e-08
Identities = 123/152 (80%)
Strand = Plus / Minus
Query: 2459 aggatacttggataactcggtgcccactgcttctacttgatacccgaatgccatatggaa 2518
|||| ||||||||||||||||| | | ||| ||||||| || || ||||| || ||||
Sbjct: 2302821 aggaaacttggataactcggtgtgcctttcttttacttgacactcgtatgccgtacggaa 2302762
Query: 2519 ttctaaatgctgattgtgtggagcatttagaccctgctggcacaggctcgttttataatg 2578
| | ||| ||| |||| ||||||||||||||||||||| ||||| || ||||||||
Sbjct: 2302761 gtttgaatattgactgtgaggagcatttagaccctgctggtacaggatctttttataaca 2302702
Query: 2579 atggagaagcagacatagttacacagcatgtt 2610
|||| || ||||| ||||| |||||||||||
Sbjct: 2302701 atggcgaggcagatgtagtttcacagcatgtt 2302670
Score = 63.9 bits (32), Expect = 4e-06
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 2787 ggttcggtcaaacccactgggagcggtagggttcatgggcgacagcaggctgatgaatgt 2846
|||||| |||||| | ||||||| ||||| ||| | ||||||| ||||| ||||||||
Sbjct: 2302152 ggttcgttcaaacactttgggagctgtaggattccttggcgacaacaggcgcatgaatgt 2302093
Query: 2847 ggctatcacaagggcccgccgacatgtc 2874
||| ||||||||||| ||||| ||||||
Sbjct: 2302092 ggccatcacaagggcacgccgtcatgtc 2302065
Score = 63.9 bits (32), Expect = 4e-06
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 625 gcacagccttatctctcacccgtccccatgcccaagggtctggaggcactctgcttcaag 684
|||||||||||||| ||| | | |||||||||||||| | |||||| |||||| |||||
Sbjct: 2306828 gcacagccttatctatcagcaattcccatgcccaagggacaggaggcgctctgcctcaag 2306769
Query: 685 gcctgtacacactaccccacccttttcgacca 716
|||| ||| ||||| || ||||| || |||||
Sbjct: 2306768 gcctctactcactatcctaccctctttgacca 2306737
Score = 54.0 bits (27), Expect = 0.004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 1431 tgaagcattgatgctacttcaaaggaatggtttgctgaaaagtaatgcttccattgatgt 1490
||||||| ||||||| ||||||||||| ||||| | ||||| ||| ||||||||| ||
Sbjct: 2304831 tgaagcactgatgcttcttcaaaggaaaggtttacagaaaaagaattcttccattggagt 2304772
Query: 1491 ggtagctactctgtt 1505
||||| ||||||||
Sbjct: 2304771 agtagccactctgtt 2304757
Score = 52.0 bits (26), Expect = 0.014
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 1933 gacttaagaaaggacttgagggactgcatagaggacgattctttagcagcaggcattcgt 1992
||||| ||||||||||||| | | |||||| |||| ||| | ||||| ||||| || |||
Sbjct: 2304323 gacttgagaaaggacttgaagcattgcatacaggatgatacattagccgcaggtatacgt 2304264
Query: 1993 caacttctgaagcaacttggga 2014
||||| ||||||| |||||||
Sbjct: 2304263 caactgttgaagcagcttggga 2304242
>dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0448B11
Length = 179858
Score = 131 bits (66), Expect = 2e-26
Identities = 186/226 (82%)
Strand = Plus / Minus
Query: 1190 tgcctccaactacactgtcacctggggacatggtttgtgtgagaacatgtaatagccgtg 1249
|||||||||| ||||| || |||||||| ||||||||| | || |||||| ||| ||| |
Sbjct: 167862 tgcctccaaccacactctctcctggggatatggtttgtatcaggacatgtgataaccggg 167803
Query: 1250 gtgagggagccacttcttgcatgcaaggctttctttataatctcggggaggatggttgca 1309
| || |||| |||||||||||||||||| | |||||||| || |||||||||||||
Sbjct: 167802 gggaaattaccacatcttgcatgcaaggctttatatataatcttggtgaggatggttgca 167743
Query: 1310 gcataactgtggctctggaatctcgccatggtgacccaactttctccaggttatttggga 1369
|||| || ||| | ||| |||| |||| |||||| || || ||||||| | | |||||||
Sbjct: 167742 gcattaccgtgacactgaaatcccgccgtggtgatcctacgttctccaagctttttggga 167683
Query: 1370 aaagtgtgcgcattgaccggatacagggattggctgatgcacttac 1415
||| |||||| |||||| |||| |||| ||||||||| ||||||||
Sbjct: 167682 aaaatgtgcggattgacaggattcaggcattggctgacgcacttac 167637
Score = 111 bits (56), Expect = 2e-20
Identities = 116/136 (85%)
Strand = Plus / Minus
Query: 2654 tccagtcaccctacattgctcaggttcaattgttgagagagaagatagaagaatatccag 2713
|||||||||| |||||||| || || ||| | || ||||| | | ||||||| |||||||
Sbjct: 164305 tccagtcaccttacattgcgcaagtacaactattaagagacaggctagaagattatccag 164246
Query: 2714 ggctttctggggttgaggtttcaacagtagatagctttcaagggagggaggcagatgcgg 2773
| |||||| |||||||||||||| |||||||||| |||||||||||||||||||| |
Sbjct: 164245 aggcttctggtgttgaggtttcaactatagatagcttccaagggagggaggcagatgccg 164186
Query: 2774 tggtcctatcaatggt 2789
||||| ||||||||||
Sbjct: 164185 tggtcatatcaatggt 164170
Score = 111 bits (56), Expect = 2e-20
Identities = 227/284 (79%)
Strand = Plus / Minus
Query: 1603 tttgatgactcccaattaagggctctctcattaggcctgaacaagaagaggcctgtttta 1662
||||||| |||||| |||| ||| || || ||||| ||||||| || |||||||| ||
Sbjct: 166491 tttgatgcctcccagttaaaagctatcacactaggcttgaacaacaaaaggcctgtccta 166432
Query: 1663 gtcatccaggggcctcctggcacgggcaagacagttttgctcacggaactcattgtacgt 1722
| ||||| || |||||||||||||||||||| | |||||| | | ||||||| | ||
Sbjct: 166431 ataatccaaggacctcctggcacgggcaagactggtttgcttagttatctcattgcatgt 166372
Query: 1723 gctgtccggcagggtgaaaatgtccttgtgacagctccaagcaatgcggcagtcgataac 1782
|||||||| |||||||| || || || || |||||||||||||| ||||| ||||||
Sbjct: 166371 gctgtccgaaagggtgaacgcgttctcgtaactgctccaagcaatgcagcagttgataac 166312
Query: 1783 atggttgaaaagttatcaagtactggcttaaacattgtgcgagttggaaaccctgctcgg 1842
||||| || ||||| ||| |||||| | ||| || ||||||||||| |||||| ||
Sbjct: 166311 atggtggagaagttgtcagatactggactggacacagtacgagttggaaatcctgctagg 166252
Query: 1843 atatcaccatcagttacttcgaagtccttggcagagattgtgaa 1886
||||| ||||| ||| |||| | |||||||| |||| |||||||
Sbjct: 166251 atatctccatctgttgcttcaaggtccttgggagagcttgtgaa 166208
Score = 85.7 bits (43), Expect = 1e-12
Identities = 124/151 (82%)
Strand = Plus / Minus
Query: 2092 ggggcagccgatccacttatcaggaaaattggttgctttgacttggtaattatagatgaa 2151
|||||||| || |||||| | |||| ||||||||||||||||| |||||||| ||||||
Sbjct: 166002 ggggcagctgacccacttgtgaggaggattggttgctttgacttagtaattattgatgaa 165943
Query: 2152 gcaggtcaaggaattgagccctcttgctggattcccatactgcaggggaaacgttgtatt 2211
||||| |||| ||| || ||||| |||||||| || || | || || ||| | || |||
Sbjct: 165942 gcaggacaagcaatcgaaccctcatgctggatccctatcttacaaggaaaaagatgcatt 165883
Query: 2212 cttgctggtgatcattgccaacttgcacctg 2242
|||||||||||||| | || ||||||||||
Sbjct: 165882 cttgctggtgatcaacggcagcttgcacctg 165852
Score = 73.8 bits (37), Expect = 4e-09
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 2350 agaatgcatgattcaatagccagttgggcatctaaagagatgtat 2394
||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 165744 agaatgcatgattcaattgccagttgggcatctaacgagatgtat 165700
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 1051 ccagttgagtacttggtgacccatgggcaggctcagcaggagcagtgtgacaccatttgc 1110
||||| |||||||| || || ||||||||| | ||||| |||||||| || |||||||||
Sbjct: 168243 ccagtagagtacttagtcactcatgggcagtcacagcaagagcagtgcgataccatttgc 168184
Query: 1111 aacttgagtgtcatcagcagctcaactgg 1139
|| |||| ||| |||||||| ||||||||
Sbjct: 168183 aatttgaatgttatcagcagttcaactgg 168155
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 928 attgaagactttgtgaggcatatgtcagacctgctacgcatcgagcgagacgcggagctg 987
|||||||||||||| | | | ||||||||||| |||| || || ||||| |||||||||
Sbjct: 168369 attgaagactttgtcaagaaaatgtcagaccttctacatatagaacgagatgcggagctg 168310
Query: 988 gagtttacacaggaggagctgaatgccac 1016
||||||||||| || || |||||||||||
Sbjct: 168309 gagtttacacaagaagaactgaatgccac 168281
Score = 71.9 bits (36), Expect = 2e-08
Identities = 123/152 (80%)
Strand = Plus / Minus
Query: 2459 aggatacttggataactcggtgcccactgcttctacttgatacccgaatgccatatggaa 2518
|||| ||||||||||||||||| | | ||| ||||||| || || ||||| || ||||
Sbjct: 164659 aggaaacttggataactcggtgtgcctttcttttacttgacactcgtatgccgtacggaa 164600
Query: 2519 ttctaaatgctgattgtgtggagcatttagaccctgctggcacaggctcgttttataatg 2578
| | ||| ||| |||| ||||||||||||||||||||| ||||| || ||||||||
Sbjct: 164599 gtttgaatattgactgtgaggagcatttagaccctgctggtacaggatctttttataaca 164540
Query: 2579 atggagaagcagacatagttacacagcatgtt 2610
|||| || ||||| ||||| |||||||||||
Sbjct: 164539 atggcgaggcagatgtagtttcacagcatgtt 164508
Score = 63.9 bits (32), Expect = 4e-06
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 2787 ggttcggtcaaacccactgggagcggtagggttcatgggcgacagcaggctgatgaatgt 2846
|||||| |||||| | ||||||| ||||| ||| | ||||||| ||||| ||||||||
Sbjct: 163990 ggttcgttcaaacactttgggagctgtaggattccttggcgacaacaggcgcatgaatgt 163931
Query: 2847 ggctatcacaagggcccgccgacatgtc 2874
||| ||||||||||| ||||| ||||||
Sbjct: 163930 ggccatcacaagggcacgccgtcatgtc 163903
Score = 63.9 bits (32), Expect = 4e-06
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 625 gcacagccttatctctcacccgtccccatgcccaagggtctggaggcactctgcttcaag 684
|||||||||||||| ||| | | |||||||||||||| | |||||| |||||| |||||
Sbjct: 168666 gcacagccttatctatcagcaattcccatgcccaagggacaggaggcgctctgcctcaag 168607
Query: 685 gcctgtacacactaccccacccttttcgacca 716
|||| ||| ||||| || ||||| || |||||
Sbjct: 168606 gcctctactcactatcctaccctctttgacca 168575
Score = 54.0 bits (27), Expect = 0.004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 1431 tgaagcattgatgctacttcaaaggaatggtttgctgaaaagtaatgcttccattgatgt 1490
||||||| ||||||| ||||||||||| ||||| | ||||| ||| ||||||||| ||
Sbjct: 166669 tgaagcactgatgcttcttcaaaggaaaggtttacagaaaaagaattcttccattggagt 166610
Query: 1491 ggtagctactctgtt 1505
||||| ||||||||
Sbjct: 166609 agtagccactctgtt 166595
Score = 52.0 bits (26), Expect = 0.014
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 1933 gacttaagaaaggacttgagggactgcatagaggacgattctttagcagcaggcattcgt 1992
||||| ||||||||||||| | | |||||| |||| ||| | ||||| ||||| || |||
Sbjct: 166161 gacttgagaaaggacttgaagcattgcatacaggatgatacattagccgcaggtatacgt 166102
Query: 1993 caacttctgaagcaacttggga 2014
||||| ||||||| |||||||
Sbjct: 166101 caactgttgaagcagcttggga 166080
>dbj|AP005758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0433B06
Length = 126258
Score = 131 bits (66), Expect = 2e-26
Identities = 186/226 (82%)
Strand = Plus / Minus
Query: 1190 tgcctccaactacactgtcacctggggacatggtttgtgtgagaacatgtaatagccgtg 1249
|||||||||| ||||| || |||||||| ||||||||| | || |||||| ||| ||| |
Sbjct: 45063 tgcctccaaccacactctctcctggggatatggtttgtatcaggacatgtgataaccggg 45004
Query: 1250 gtgagggagccacttcttgcatgcaaggctttctttataatctcggggaggatggttgca 1309
| || |||| |||||||||||||||||| | |||||||| || |||||||||||||
Sbjct: 45003 gggaaattaccacatcttgcatgcaaggctttatatataatcttggtgaggatggttgca 44944
Query: 1310 gcataactgtggctctggaatctcgccatggtgacccaactttctccaggttatttggga 1369
|||| || ||| | ||| |||| |||| |||||| || || ||||||| | | |||||||
Sbjct: 44943 gcattaccgtgacactgaaatcccgccgtggtgatcctacgttctccaagctttttggga 44884
Query: 1370 aaagtgtgcgcattgaccggatacagggattggctgatgcacttac 1415
||| |||||| |||||| |||| |||| ||||||||| ||||||||
Sbjct: 44883 aaaatgtgcggattgacaggattcaggcattggctgacgcacttac 44838
Score = 111 bits (56), Expect = 2e-20
Identities = 116/136 (85%)
Strand = Plus / Minus
Query: 2654 tccagtcaccctacattgctcaggttcaattgttgagagagaagatagaagaatatccag 2713
|||||||||| |||||||| || || ||| | || ||||| | | ||||||| |||||||
Sbjct: 41506 tccagtcaccttacattgcgcaagtacaactattaagagacaggctagaagattatccag 41447
Query: 2714 ggctttctggggttgaggtttcaacagtagatagctttcaagggagggaggcagatgcgg 2773
| |||||| |||||||||||||| |||||||||| |||||||||||||||||||| |
Sbjct: 41446 aggcttctggtgttgaggtttcaactatagatagcttccaagggagggaggcagatgccg 41387
Query: 2774 tggtcctatcaatggt 2789
||||| ||||||||||
Sbjct: 41386 tggtcatatcaatggt 41371
Score = 111 bits (56), Expect = 2e-20
Identities = 227/284 (79%)
Strand = Plus / Minus
Query: 1603 tttgatgactcccaattaagggctctctcattaggcctgaacaagaagaggcctgtttta 1662
||||||| |||||| |||| ||| || || ||||| ||||||| || |||||||| ||
Sbjct: 43692 tttgatgcctcccagttaaaagctatcacactaggcttgaacaacaaaaggcctgtccta 43633
Query: 1663 gtcatccaggggcctcctggcacgggcaagacagttttgctcacggaactcattgtacgt 1722
| ||||| || |||||||||||||||||||| | |||||| | | ||||||| | ||
Sbjct: 43632 ataatccaaggacctcctggcacgggcaagactggtttgcttagttatctcattgcatgt 43573
Query: 1723 gctgtccggcagggtgaaaatgtccttgtgacagctccaagcaatgcggcagtcgataac 1782
|||||||| |||||||| || || || || |||||||||||||| ||||| ||||||
Sbjct: 43572 gctgtccgaaagggtgaacgcgttctcgtaactgctccaagcaatgcagcagttgataac 43513
Query: 1783 atggttgaaaagttatcaagtactggcttaaacattgtgcgagttggaaaccctgctcgg 1842
||||| || ||||| ||| |||||| | ||| || ||||||||||| |||||| ||
Sbjct: 43512 atggtggagaagttgtcagatactggactggacacagtacgagttggaaatcctgctagg 43453
Query: 1843 atatcaccatcagttacttcgaagtccttggcagagattgtgaa 1886
||||| ||||| ||| |||| | |||||||| |||| |||||||
Sbjct: 43452 atatctccatctgttgcttcaaggtccttgggagagcttgtgaa 43409
Score = 85.7 bits (43), Expect = 1e-12
Identities = 124/151 (82%)
Strand = Plus / Minus
Query: 2092 ggggcagccgatccacttatcaggaaaattggttgctttgacttggtaattatagatgaa 2151
|||||||| || |||||| | |||| ||||||||||||||||| |||||||| ||||||
Sbjct: 43203 ggggcagctgacccacttgtgaggaggattggttgctttgacttagtaattattgatgaa 43144
Query: 2152 gcaggtcaaggaattgagccctcttgctggattcccatactgcaggggaaacgttgtatt 2211
||||| |||| ||| || ||||| |||||||| || || | || || ||| | || |||
Sbjct: 43143 gcaggacaagcaatcgaaccctcatgctggatccctatcttacaaggaaaaagatgcatt 43084
Query: 2212 cttgctggtgatcattgccaacttgcacctg 2242
|||||||||||||| | || ||||||||||
Sbjct: 43083 cttgctggtgatcaacggcagcttgcacctg 43053
Score = 73.8 bits (37), Expect = 4e-09
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 2350 agaatgcatgattcaatagccagttgggcatctaaagagatgtat 2394
||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 42945 agaatgcatgattcaattgccagttgggcatctaacgagatgtat 42901
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 1051 ccagttgagtacttggtgacccatgggcaggctcagcaggagcagtgtgacaccatttgc 1110
||||| |||||||| || || ||||||||| | ||||| |||||||| || |||||||||
Sbjct: 45444 ccagtagagtacttagtcactcatgggcagtcacagcaagagcagtgcgataccatttgc 45385
Query: 1111 aacttgagtgtcatcagcagctcaactgg 1139
|| |||| ||| |||||||| ||||||||
Sbjct: 45384 aatttgaatgttatcagcagttcaactgg 45356
Score = 73.8 bits (37), Expect = 4e-09
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 928 attgaagactttgtgaggcatatgtcagacctgctacgcatcgagcgagacgcggagctg 987
|||||||||||||| | | | ||||||||||| |||| || || ||||| |||||||||
Sbjct: 45570 attgaagactttgtcaagaaaatgtcagaccttctacatatagaacgagatgcggagctg 45511
Query: 988 gagtttacacaggaggagctgaatgccac 1016
||||||||||| || || |||||||||||
Sbjct: 45510 gagtttacacaagaagaactgaatgccac 45482
Score = 71.9 bits (36), Expect = 2e-08
Identities = 123/152 (80%)
Strand = Plus / Minus
Query: 2459 aggatacttggataactcggtgcccactgcttctacttgatacccgaatgccatatggaa 2518
|||| ||||||||||||||||| | | ||| ||||||| || || ||||| || ||||
Sbjct: 41860 aggaaacttggataactcggtgtgcctttcttttacttgacactcgtatgccgtacggaa 41801
Query: 2519 ttctaaatgctgattgtgtggagcatttagaccctgctggcacaggctcgttttataatg 2578
| | ||| ||| |||| ||||||||||||||||||||| ||||| || ||||||||
Sbjct: 41800 gtttgaatattgactgtgaggagcatttagaccctgctggtacaggatctttttataaca 41741
Query: 2579 atggagaagcagacatagttacacagcatgtt 2610
|||| || ||||| ||||| |||||||||||
Sbjct: 41740 atggcgaggcagatgtagtttcacagcatgtt 41709
Score = 63.9 bits (32), Expect = 4e-06
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 2787 ggttcggtcaaacccactgggagcggtagggttcatgggcgacagcaggctgatgaatgt 2846
|||||| |||||| | ||||||| ||||| ||| | ||||||| ||||| ||||||||
Sbjct: 41191 ggttcgttcaaacactttgggagctgtaggattccttggcgacaacaggcgcatgaatgt 41132
Query: 2847 ggctatcacaagggcccgccgacatgtc 2874
||| ||||||||||| ||||| ||||||
Sbjct: 41131 ggccatcacaagggcacgccgtcatgtc 41104
Score = 63.9 bits (32), Expect = 4e-06
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 625 gcacagccttatctctcacccgtccccatgcccaagggtctggaggcactctgcttcaag 684
|||||||||||||| ||| | | |||||||||||||| | |||||| |||||| |||||
Sbjct: 45867 gcacagccttatctatcagcaattcccatgcccaagggacaggaggcgctctgcctcaag 45808
Query: 685 gcctgtacacactaccccacccttttcgacca 716
|||| ||| ||||| || ||||| || |||||
Sbjct: 45807 gcctctactcactatcctaccctctttgacca 45776
Score = 54.0 bits (27), Expect = 0.004
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 1431 tgaagcattgatgctacttcaaaggaatggtttgctgaaaagtaatgcttccattgatgt 1490
||||||| ||||||| ||||||||||| ||||| | ||||| ||| ||||||||| ||
Sbjct: 43870 tgaagcactgatgcttcttcaaaggaaaggtttacagaaaaagaattcttccattggagt 43811
Query: 1491 ggtagctactctgtt 1505
||||| ||||||||
Sbjct: 43810 agtagccactctgtt 43796
Score = 52.0 bits (26), Expect = 0.014
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 1933 gacttaagaaaggacttgagggactgcatagaggacgattctttagcagcaggcattcgt 1992
||||| ||||||||||||| | | |||||| |||| ||| | ||||| ||||| || |||
Sbjct: 43362 gacttgagaaaggacttgaagcattgcatacaggatgatacattagccgcaggtatacgt 43303
Query: 1993 caacttctgaagcaacttggga 2014
||||| ||||||| |||||||
Sbjct: 43302 caactgttgaagcagcttggga 43281
>ref|NM_122988.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ DNA
binding (AT5G35970) mRNA, complete cds
Length = 3314
Score = 58.0 bits (29), Expect = 2e-04
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 2128 tttgacttggtaattatagatgaagcaggtcaaggaattgagccctcttgctggattccc 2187
||||| ||||| ||||||||||||| ||||| || ||||| || |||||||| ||
Sbjct: 2246 tttgatttggttgttatagatgaagctggtcagtctatcgagccttcatgctggatccca 2305
Query: 2188 atactgcaggggaaacgttgtattcttgctggtgatc 2224
||| |||| |||||||||||||||||| | |||||||
Sbjct: 2306 atattgcaagggaaacgttgtattctttccggtgatc 2342
Score = 56.0 bits (28), Expect = 0.001
Identities = 88/108 (81%)
Strand = Plus / Plus
Query: 1317 tgtggctctggaatctcgccatggtgacccaactttctccaggttatttgggaaaagtgt 1376
||||||||| |||||||| ||||| || || ||||| |||| | | ||||| || |||||
Sbjct: 1441 tgtggctctagaatctcgtcatggagatcctactttttccaagctctttggaaagagtgt 1500
Query: 1377 gcgcattgaccggatacagggattggctgatgcacttacttacgagcg 1424
| | ||||| || || || || ||||| ||||| ||||||||||||||
Sbjct: 1501 gagaattgatcgtattcatgggttggccgatgcccttacttacgagcg 1548
Score = 52.0 bits (26), Expect = 0.014
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 2746 agctttcaagggagggaggcagatgcggtggtcctatcaatggttcggtcaaac 2799
|||||||||||| ||||||| ||||| ||| || | |||||||| |||||||||
Sbjct: 2864 agctttcaagggcgggaggctgatgcagtgatcatctcaatggtacggtcaaac 2917
Score = 48.1 bits (24), Expect = 0.22
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 2453 ttgtaaaggatacttggataactcggtgcccactgcttctacttgatacccgaatgccat 2512
|||| |||| |||||||||||| | ||||||||| |||| ||||| || |||||||||
Sbjct: 2571 ttgtgaaggctacttggataacgcaatgcccactggttctgcttgacacaagaatgccat 2630
Query: 2513 atgg 2516
||||
Sbjct: 2631 atgg 2634
Score = 44.1 bits (22), Expect = 3.5
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2554 gctggcacaggctcgttttataatgatggagaagcaga 2591
|||||||||||||| || || ||||| |||||||||||
Sbjct: 2672 gctggcacaggctcattatacaatgaaggagaagcaga 2709
>dbj|AB026643.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MEE13
Length = 84710
Score = 58.0 bits (29), Expect = 2e-04
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 2128 tttgacttggtaattatagatgaagcaggtcaaggaattgagccctcttgctggattccc 2187
||||| ||||| ||||||||||||| ||||| || ||||| || |||||||| ||
Sbjct: 30591 tttgatttggttgttatagatgaagctggtcagtctatcgagccttcatgctggatccca 30532
Query: 2188 atactgcaggggaaacgttgtattcttgctggtgatc 2224
||| |||| |||||||||||||||||| | |||||||
Sbjct: 30531 atattgcaagggaaacgttgtattctttccggtgatc 30495
Score = 52.0 bits (26), Expect = 0.014
Identities = 86/106 (81%)
Strand = Plus / Minus
Query: 1317 tgtggctctggaatctcgccatggtgacccaactttctccaggttatttgggaaaagtgt 1376
||||||||| |||||||| ||||| || || ||||| |||| | | ||||| || |||||
Sbjct: 31570 tgtggctctagaatctcgtcatggagatcctactttttccaagctctttggaaagagtgt 31511
Query: 1377 gcgcattgaccggatacagggattggctgatgcacttacttacgag 1422
| | ||||| || || || || ||||| ||||| ||||||||||||
Sbjct: 31510 gagaattgatcgtattcatgggttggccgatgcccttacttacgag 31465
Score = 44.1 bits (22), Expect = 3.5
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 2554 gctggcacaggctcgttttataatgatggagaagcaga 2591
|||||||||||||| || || ||||| |||||||||||
Sbjct: 29742 gctggcacaggctcattatacaatgaaggagaagcaga 29705
Score = 44.1 bits (22), Expect = 3.5
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 2463 tacttggataactcggtgcccactgcttctacttgatacccgaatgccatatgg 2516
|||||||||||| | ||||||||| |||| ||||| || |||||||||||||
Sbjct: 29833 tacttggataacgcaatgcccactggttctgcttgacacaagaatgccatatgg 29780
>emb|AL954136.13| Zebrafish DNA sequence from clone CH211-220E11, complete sequence
Length = 194869
Score = 44.1 bits (22), Expect = 3.5
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1967 acgattctttagcagcaggcattcgt 1992
||||||||||||||||| ||||||||
Sbjct: 26117 acgattctttagcagcacgcattcgt 26092
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 624,249,103
Number of extensions: 34059054
Number of successful extensions: 173517
Number of sequences better than 10.0: 28
Number of HSP's gapped: 173481
Number of HSP's successfully gapped: 117
Length of query: 3597
Length of database: 18,610,659,111
Length adjustment: 24
Effective length of query: 3573
Effective length of database: 18,499,340,271
Effective search space: 66098142788283
Effective search space used: 66098142788283
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)