ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf2m20 |
|---|---|
| Clone Library Name | barley_pub |
>Q9FXE5:FUCO3_ARATH Alpha-L-fucosidase 3 precursor - Arabidopsis thaliana (Mouse-ear| cress) Length = 372 Score = 179 bits (453), Expect = 3e-44 Identities = 124/352 (35%), Positives = 176/352 (50%), Gaps = 24/352 (6%) Frame = +2 Query: 116 FTSIISFGDSYADTGNLVLWTDPVLPGLLLKNLPYGETFFGHPTGRATDGRLVLDFIAEA 295 F +I +FGDS +DTG L P P+G +FFG P GR DGRLV+DFIAE+ Sbjct: 28 FPAIFNFGDSNSDTGGLSAAFGQAGP-------PHGSSFFGSPAGRYCDGRLVIDFIAES 80 Query: 296 LGLPSVPPYL-AKGSNFSAGVNFAVAGAP--ALNLTYLQGLNLTVNPPIDGSLHDQLVWF 466 LGLP + +L + GSNFS G NFA AG+P ALN T Q +P SL Q V F Sbjct: 81 LGLPYLSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQS---GFSP---FSLDVQFVQF 134 Query: 467 QNL--KPSLCKGQSG--------SDCFGSSLFVMGEFGGNDYISFLLSNRTVEQARPYVP 616 N + + + G SD F +L+ + G ND + +N+TVEQ VP Sbjct: 135 YNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTF-DIGQNDLTAGYFANKTVEQVETEVP 193 Query: 617 QIVDSISRGVEKLVQHGAKYILVADIFPIGCLPGALTKLASPNTV-EYDRHGCLKSVNRL 793 +I+ ++ + G +Y + + PIGCL + + PN ++D HGC+ +N L Sbjct: 194 EIISQFMNAIKNIYGQGGRYFWIHNTGPIGCLAYVIERF--PNKASDFDSHGCVSPLNHL 251 Query: 794 ARYHNSLLRQQIKTLRHKYPHAKFITAEYYK-PFLAFLDMPGHFGLNSSTTLLTCCGAGG 970 A+ N L+Q + LR A + Y F+ GH G S L++CCG GG Sbjct: 252 AQQFNHALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGH-GFKGS--LVSCCGHGG 308 Query: 971 PPYNYDFNAGCGLPGV---------EACANPSEALQWDGFHLTESAYRVVAD 1099 YNY+ GCG+ + + C P +A+ WDG H T++A + + D Sbjct: 309 -KYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFIFD 359
>Q7Y1X1:EST_HEVBR Esterase precursor - Hevea brasiliensis (Para rubber tree)| Length = 391 Score = 165 bits (417), Expect = 4e-40 Identities = 123/364 (33%), Positives = 170/364 (46%), Gaps = 24/364 (6%) Frame = +2 Query: 116 FTSIISFGDSYADTGNLVLWTDPVLPGLLLKNLPYGETFFGHPTGRATDGRLVLDFIAEA 295 F +I +FGDS +DTG P+ P PYGETFF TGR +DGRL++DFIAE+ Sbjct: 32 FPAIFNFGDSNSDTGGKAAAFYPLNP-------PYGETFFHRSTGRYSDGRLIIDFIAES 84 Query: 296 LGLPSVPPYLAK-GSNFSAGVNFAVAGAPALNLTYLQGLNLTVNPPIDGSLHDQL-VWFQ 469 LP + PYL+ GSNF G +FA AG+ L T+ P G L V + Sbjct: 85 FNLPYLSPYLSSLGSNFKHGADFATAGSTIK-------LPTTIIPAHGGFSPFYLDVQYS 137 Query: 470 NLKPSLCKGQSGSDC-------------FGSSLFVMGEFGGNDYISFLLSNRTVEQARPY 610 + + + Q + F +L+ + G ND L N TVE+ Sbjct: 138 QFRQFIPRSQFIRETGGIFAELVPEEYYFEKALYTF-DIGQNDLTEGFL-NLTVEEVNAT 195 Query: 611 VPQIVDSISRGVEKLVQHGAKYILVADIFPIGCLPGALTKLASPNTVEYDRHGCLKSVNR 790 VP +V+S S V+K+ GA+ + + PIGCL LT E D GC K+ N Sbjct: 196 VPDLVNSFSANVKKIYDLGARTFWIHNTGPIGCLSFILTYFP---WAEKDSAGCAKAYNE 252 Query: 791 LARYHNSLLRQQIKTLRHKYPHAKFITAEYYKPFLAFLDMPGHFGLNSSTTLLTCCGAGG 970 +A++ N L++ + LR P A F+ + Y + P G L+TCCG GG Sbjct: 253 VAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGF--EFPLITCCGYGG 310 Query: 971 PPYNYDFNAGCG---------LPGVEACANPSEALQWDGFHLTESAYRVVADGWLHGPYA 1123 YN+ A CG V +CA PS + WDG H TE+A D G ++ Sbjct: 311 -KYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFS 369 Query: 1124 DPPI 1135 DPP+ Sbjct: 370 DPPV 373
>P40603:APG_BRANA Anther-specific proline-rich protein APG - Brassica napus (Rape)| Length = 449 Score = 81.6 bits (200), Expect = 6e-15 Identities = 91/339 (26%), Positives = 138/339 (40%), Gaps = 16/339 (4%) Frame = +2 Query: 122 SIISFGDSYADTGNLVLWTDPVLPGLLLKNLPYGETF-FGHPTGRATDGRLVLDFIAEAL 298 ++ FGDS DTGN + + L PYG F G TGR ++GR+ D+I++ L Sbjct: 125 AVFFFGDSIFDTGN----NNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYL 180 Query: 299 GLPS-VPPYLAK---------GSNFSAGVNFAVAGAPALNLTYLQGLNLTVNPPIDGSLH 448 G+ VP Y+ K S+ GV+FA GA L T + +T ++ Sbjct: 181 GVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQT-SESWKVT-------TML 232 Query: 449 DQLVWFQNLKPSLCK--GQSGSDCFGSSLFVMGEFGGNDYISFLLSN---RTVEQARPYV 613 DQL +FQ+ K + K G+ + S + G ND I N + Sbjct: 233 DQLTYFQDYKKRMKKLVGKKKTKKIVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDVDSFT 292 Query: 614 PQIVDSISRGVEKLVQHGAKYILVADIFPIGCLPGALTKLASPNTVEYDRHGCLKSVNRL 793 + DS + V +L +GA+ I V PIGC P K + C + +N Sbjct: 293 TMMADSAASFVLQLYGYGARRIGVIGTPPIGCTPSQRVK---------KKKICNEDLNYA 343 Query: 794 ARYHNSLLRQQIKTLRHKYPHAKFITAEYYKPFLAFLDMPGHFGLNSSTTLLTCCGAGGP 973 A+ NS L + L P++ + + Y F L+ P +G CC G Sbjct: 344 AQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKK--PCCKIG-- 399 Query: 974 PYNYDFNAGCGLPGVEACANPSEALQWDGFHLTESAYRV 1090 C ++ +N S L WDG H ++ AY + Sbjct: 400 --LTKGGVFCKERTLKNMSNASSYLFWDGLHPSQRAYEI 436
>P40602:APG_ARATH Anter-specific proline-rich protein APG precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 534 Score = 80.5 bits (197), Expect = 1e-14 Identities = 89/345 (25%), Positives = 139/345 (40%), Gaps = 21/345 (6%) Frame = +2 Query: 122 SIISFGDSYADTGNLVLWTDPVLPGLLLKNLPYGETF-FGHPTGRATDGRLVLDFIAEAL 298 ++ FGDS DTGN + + + PYG F F TGR ++G + D++A+ + Sbjct: 204 AVFFFGDSVFDTGN----NNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYM 259 Query: 299 GLPS-VPPYL---AKGSNFSAGVNFAVAGAPALNLTYLQGLNLTVNPPIDG-SLHDQLVW 463 G+ VP YL + ++ GV+FA GA G N T + + + DQL + Sbjct: 260 GVKEIVPAYLDPKIQPNDLLTGVSFASGGA---------GYNPTTSEAANAIPMLDQLTY 310 Query: 464 FQNLKPSLCK------------GQSGSDCFGSSLFVMGEFGGNDYISFLLSN---RTVEQ 598 FQ+ + + G ++ S + G ND I + R Sbjct: 311 FQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKND 370 Query: 599 ARPYVPQIVDSISRGVEKLVQHGAKYILVADIFPIGCLPGALTKLASPNTVEYDRHGCLK 778 Y I DS + V +L +GA+ I V P+GC+P K + C + Sbjct: 371 IDSYTTIIADSAASFVLQLYGYGARRIGVIGTPPLGCVPSQRLK---------KKKICNE 421 Query: 779 SVNRLARYHNSLLRQQIKTLRHKYPHAKFITAEYYKPFLAFLDMPGHFGLNSSTTLLTCC 958 +N ++ NS L + L P++ F+ + Y L+ P +G T CC Sbjct: 422 ELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEE--TKKPCC 479 Query: 959 GAGGPPYNYDFNAGCGLPGVEACANPSEALQWDGFHLTESAYRVV 1093 G A C + C N S L WDG H T+ AY+ + Sbjct: 480 KTG----LLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAYKTI 520
>Q8MEX8:MATK_LEPPR Maturase K - Lepidozamia peroffskyana (Scaly zamia)| Length = 514 Score = 34.7 bits (78), Expect = 0.85 Identities = 28/116 (24%), Positives = 45/116 (38%) Frame = +2 Query: 521 SSLFVMGEFGGNDYISFLLSNRTVEQARPYVPQIVDSISRGVEKLVQHGAKYILVADIFP 700 SSL MG ND SFL R++ + R IV ++ KLV H + + Sbjct: 41 SSLEPMGNSSSNDRFSFLTVKRSISRIRQQNGSIVPFVNCDQNKLVGHNKSFYSELVLGG 100 Query: 701 IGCLPGALTKLASPNTVEYDRHGCLKSVNRLARYHNSLLRQQIKTLRHKYPHAKFI 868 + +PG + S + +E N + + + + K PH+ FI Sbjct: 101 LTAIPGVPFSIRSKHPLE--------EXNEWTSFRS--IHSIFPLMEDKIPHSNFI 146
>P38739:WSC4_YEAST Cell wall integrity and stress response component 4 precursor -| Saccharomyces cerevisiae (Baker's yeast) Length = 605 Score = 33.5 bits (75), Expect = 1.9 Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 4/147 (2%) Frame = +3 Query: 423 TLRSTAPSTISSCGSRI*SLRSAKDNQVAIALG-APCLSWESSEEMTT*A-SFCPTELLN 596 +++S ST SS S+ S+ + +P L+ S+ +TT + S P+ + Sbjct: 117 SVQSVETSTESSVYVSSSSITSSSSTSIVDTTTISPTLTSTSTTPLTTASTSTTPSTDIT 176 Query: 597 K--PDLTFLKLSTAFPEA*RN*SSMAPSTSLWQTSSRLAAYQERSQSSLAQTRWSMIGTD 770 P T KLST+ P + SS + +TS ++S + + ++ + T ++I T Sbjct: 177 SALPTTTSTKLSTSIPTS--TTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSSTLISTS 234 Query: 771 A*RV*TGWPATTTLSSVNRSRRSGTST 851 + P TT+ + ++ S S TST Sbjct: 235 TSSSSSSTPTTTSSAPISTSTTSSTST 261
>Q8D294:SYV_WIGBR Valyl-tRNA synthetase - Wigglesworthia glossinidia brevipalpis| Length = 881 Score = 32.3 bits (72), Expect = 4.2 Identities = 27/116 (23%), Positives = 50/116 (43%) Frame = +2 Query: 533 VMGEFGGNDYISFLLSNRTVEQARPYVPQIVDSISRGVEKLVQHGAKYILVADIFPIGCL 712 ++ Y F + +++ P++P I + I + + K+V++ K + + FP L Sbjct: 728 IISRLNNTCYTLFFILENSLKMLHPFIPFITEEIWKNLSKMVRNERKNTTILEFFPKKYL 787 Query: 713 PGALTKLASPNTVEYDRHGCLKSVNRLARYHNSLLRQQIKTLRHKYPHAKFITAEY 880 L K S N +E C+K++ R L+ + KT +K FI Y Sbjct: 788 --FLKKDNSFNEIE-----CIKNIITCIR----KLKFEKKTKFNKLVDVCFINNSY 832
>Q8MEX7:MATK_MACCO Maturase K - Macrozamia communis (Burrawang palm)| Length = 499 Score = 32.3 bits (72), Expect = 4.2 Identities = 30/116 (25%), Positives = 46/116 (39%) Frame = +2 Query: 521 SSLFVMGEFGGNDYISFLLSNRTVEQARPYVPQIVDSISRGVEKLVQHGAKYILVADIFP 700 SS MG ND SFL R++ + R IV ++ KLV H F Sbjct: 41 SSFEPMGNSSSNDRFSFLTVKRSISRIRQQNGSIVPFVNCDQNKLVGHNKS-------FY 93 Query: 701 IGCLPGALTKLASPNTVEYDRHGCLKSVNRLARYHNSLLRQQIKTLRHKYPHAKFI 868 + G LT ++ +H L+ +N A + + + + K PH+ FI Sbjct: 94 SELVLGGLTAVSEVPFSIRSKHS-LEGMNEWASFRS--INSIFPLMEDKIPHSNFI 146
>Q89AB3:EX5B_BUCBP Exodeoxyribonuclease V beta chain - Buchnera aphidicola subsp.| Baizongia pistaciae Length = 1180 Score = 32.3 bits (72), Expect = 4.2 Identities = 16/52 (30%), Positives = 30/52 (57%) Frame = +2 Query: 755 YDRHGCLKSVNRLARYHNSLLRQQIKTLRHKYPHAKFITAEYYKPFLAFLDM 910 Y HG + +L ++++ L+ Q K L+H YP I+ +++K + AFL + Sbjct: 128 YTIHGFCYKILKLNKFNSELMLQN-KILKHTYPLYLKISIKFWKYYFAFLSL 178
>Q9QYH6:MAGD1_MOUSE Melanoma-associated antigen D1 - Mus musculus (Mouse)| Length = 775 Score = 32.0 bits (71), Expect = 5.5 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 6/61 (9%) Frame = +3 Query: 207 RTSPTVRPSSATPPGVPPTAAW----CWTSSPRLWVCLLCRHTSQRGATSPPE*TSP--W 368 R++P + PPG PP W W +P W R T SPP +P W Sbjct: 271 RSAPVPVTTQQNPPGAPPNVVWQTPLAW-QNPSGWQNQTARQTPPAARQSPPARQTPSAW 329 Query: 369 Q 371 Q Sbjct: 330 Q 330
>P40601:LIP1_PHOLU Lipase 1 precursor - Photorhabdus luminescens (Xenorhabdus| luminescens) Length = 645 Score = 31.6 bits (70), Expect = 7.2 Identities = 47/200 (23%), Positives = 77/200 (38%) Frame = +2 Query: 116 FTSIISFGDSYADTGNLVLWTDPVLPGLLLKNLPYGETFFGHPTGRATDGRLVLDFIAEA 295 + ++ FGDS +D GN +T + G T+ +L DFIA+ Sbjct: 25 YNNLYVFGDSLSDGGNNGRYTVDGING--------------------TESKLYNDFIAQQ 64 Query: 296 LGLPSVPPYLAKGSNFSAGVNFAVAGAPALNLTYLQGLNLTVNPPIDGSLHDQLVWFQNL 475 LG+ V ++ G N+A GA T + LN N DQ++ + Sbjct: 65 LGIELV-------NSKKGGTNYAAGGA-----TAVADLNNKHN------TQDQVMGY--- 103 Query: 476 KPSLCKGQSGSDCFGSSLFVMGEFGGNDYISFLLSNRTVEQARPYVPQIVDSISRGVEKL 655 L + +D G + GGND + L R A+ + + + S V L Sbjct: 104 ---LASHSNRADHNG---MYVHWIGGNDVDAAL---RNPADAQKIITESAMAASSQVHAL 154 Query: 656 VQHGAKYILVADIFPIGCLP 715 + GA ++V + +G P Sbjct: 155 LNAGAGLVIVPTVPDVGMTP 174
>Q96DU7:IP3KC_HUMAN Inositol-trisphosphate 3-kinase C - Homo sapiens (Human)| Length = 683 Score = 31.6 bits (70), Expect = 7.2 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Frame = -2 Query: 265 AVGGTPGGVAEEGLTVGEVLEQETRKDGISPQDQVTRVGVGVPEADY--GGEAAPAATGV 92 A G P G T G L E + G+ P G P+A++ G+ PAA G+ Sbjct: 48 APAGRPEGGGPWARTEGSSLHSEPERAGLGPAP-----GTESPQAEFWTDGQTEPAAAGL 102 Query: 91 GTAEARQHEE*KEECCMRRSH 29 G R ++ + + R+H Sbjct: 103 GVETERPKQKTEPDRSSLRTH 123
>P98078:DAB2_MOUSE Disabled homolog 2 - Mus musculus (Mouse)| Length = 766 Score = 31.6 bits (70), Expect = 7.2 Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 8/50 (16%) Frame = +3 Query: 174 GLIPSFRVSCS-RTSPTVR-----PSSATPPGVPPTAAWCWTSS--PRLW 299 G PSFR T+P V+ PS ATP PP WC T+S P W Sbjct: 530 GQPPSFRQPLVFGTTPAVQVWNQSPSFATPASPPPPTVWCPTTSVAPNAW 579
>Q8CCG1:CN140_MOUSE Uncharacterized protein C14orf140 homolog - Mus musculus (Mouse)| Length = 527 Score = 31.6 bits (70), Expect = 7.2 Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = -3 Query: 381 AGAPATAKFTPAEKLLPFARYGGTEGRPKASAMKSSTRRPSVARPVGWPKKVSP*GR-FL 205 AG A A F PAE+L + G P +S SST P +A K S GR FL Sbjct: 338 AGPSADAFFQPAEELGSTLQESSRSGTPGSSGSSSSTEEPELA-------KCSHCGRSFL 390 Query: 204 SRRPGRTGSV 175 S R R +V Sbjct: 391 SLRLQRHSTV 400
>Q61079:SIM2_MOUSE Single-minded homolog 2 - Mus musculus (Mouse)| Length = 657 Score = 31.2 bits (69), Expect = 9.4 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +1 Query: 763 ARMPEECEPAGPLPQLSPPSTDQDAPAQVPTCQVHYRRVL 882 AR P EC +PP+ + APAQ+P ++Y RVL Sbjct: 575 ARAPPEC--------CAPPAPEPQAPAQLPFVLLNYHRVL 606
>Q68DV7:RNF43_HUMAN RING finger protein 43 precursor - Homo sapiens (Human)| Length = 783 Score = 31.2 bits (69), Expect = 9.4 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Frame = +3 Query: 168 SCGLIPSFRVSCSRT-SPTVRPSSATPPGV-----PPTAAWCWTSSPRLWVCLLCRHTSQ 329 +C + P + S + SP P PPG+ P T C+++S +W+CL R + Sbjct: 677 ACQIFPHYTPSVAYPWSPEAHPLICGPPGLDKRLLPETPGPCYSNSQPVWLCLTPRQPLE 736 Query: 330 RGATSPPE*TSPW 368 P E S W Sbjct: 737 --PHPPGEGPSEW 747
>P37868:PEFC_SALTY Outer membrane usher protein pefC precursor - Salmonella| typhimurium Length = 802 Score = 31.2 bits (69), Expect = 9.4 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +2 Query: 233 FGHPTGRATDGRLVLDFIAEALGLPSVPPYLAKGSNFSAG 352 F H + +TD L LDF+ G+ ++P L GS+F AG Sbjct: 18 FSHLSFASTDSELNLDFLQ---GMSAIPSVLKSGSDFPAG 54
>P31783:CD8A_BOVIN T-cell surface glycoprotein CD8 alpha chain precursor - Bos taurus| (Bovine) Length = 242 Score = 31.2 bits (69), Expect = 9.4 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 159 VTWSCGLIPSFRVSCSRTSPTVRPSSATPPGVPPTAAWCWTSSPRLWVC 305 + + +P F + T+P +RPSSA P P T + SPR VC Sbjct: 127 ILYFSNFVPVFLPAKPATTPAMRPSSAAPTSAPQTR----SVSPRSEVC 171
>Q9NP78:ABCB9_HUMAN ATP-binding cassette sub-family B member 9 precursor - Homo sapiens| (Human) Length = 766 Score = 31.2 bits (69), Expect = 9.4 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = +2 Query: 221 GETFFGHPTGRATDGRLVLDFIAEALGLPSVPPYLAKGSNFSAGV 355 GETF + TGRA DG ++ + + + LA GS+F+AG+ Sbjct: 201 GETFLPYYTGRAIDGIVIQKSMDQFSTAVVIVCLLAIGSSFAAGI 245 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 241,359,763 Number of extensions: 6002084 Number of successful extensions: 19446 Number of sequences better than 10.0: 19 Number of HSP's gapped: 19375 Number of HSP's successfully gapped: 20 Length of query: 416 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 300 Effective length of database: 68,868,219 Effective search space: 20660465700 Effective search space used: 20660465700 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
