| Clone Name | FLbaf2m05 |
|---|---|
| Clone Library Name | barley_pub |
>P19893:VIE2_HCMVA 45 kDa immediate-early protein 2 - Human cytomegalovirus (strain| AD169) (HHV-5) (Human herpesvirus 5) Length = 580 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +3 Query: 9 TFSSTFLRTKCEXXXXXXXXXXXXXPPELAQKVTESIKQAEEFCEDNPETD 161 T ++TFL+T PELA++ ++ +Q E C +NPE D Sbjct: 30 TKATTFLQTMLRKEVNSQLSLGDPLFPELAEESLKTFEQVTEDCNENPEKD 80
>P13202:VIE1_HCMVA 55 kDa immediate-early protein 1 - Human cytomegalovirus (strain| AD169) (HHV-5) (Human herpesvirus 5) Length = 491 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +3 Query: 9 TFSSTFLRTKCEXXXXXXXXXXXXXPPELAQKVTESIKQAEEFCEDNPETD 161 T ++TFL+T PELA++ ++ +Q E C +NPE D Sbjct: 30 TKATTFLQTMLRKEVNSQLSLGDPLFPELAEESLKTFEQVTEDCNENPEKD 80
>P12860:G3PB_SPIOL Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 451 Score = 30.0 bits (66), Expect = 2.6 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +3 Query: 129 EEFCEDNPETDECRTYD 179 E+FC+DNP +EC+ Y+ Sbjct: 435 EDFCKDNPADEECKLYE 451
>P03169:VIE1_HCMVT 55 kDa immediate-early protein 1 - Human cytomegalovirus (strain| Towne) (HHV-5) (Human herpesvirus 5) Length = 491 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +3 Query: 9 TFSSTFLRTKCEXXXXXXXXXXXXXPPELAQKVTESIKQAEEFCEDNPETD 161 T ++TFL+T PELA++ ++ ++ E C +NPE D Sbjct: 30 TKATTFLQTMLRKEVNSQLSLGDPLFPELAEESLKTFERVTEDCNENPEKD 80
>Q136R8:KUP1_RHOPS Probable potassium transport system protein kup 1 -| Rhodopseudomonas palustris (strain BisB5) Length = 634 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = +1 Query: 205 LLPLPAVIMSGSFELSFRGTLASWACKFGLLLYLAWLTI 321 +LPL I+ G F + FRGT A+ A FG ++ L W T+ Sbjct: 154 ILPLSMAILIGLFVVQFRGT-AAVAAWFGPIM-LLWFTV 190
>P12859:G3PB_PEA Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor -| Pisum sativum (Garden pea) Length = 451 Score = 29.3 bits (64), Expect = 4.4 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +3 Query: 129 EEFCEDNPETDECRTYD 179 E+FCE NP +EC+ Y+ Sbjct: 435 EDFCETNPADEECKVYE 451
>P25857:G3PB_ARATH Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 447 Score = 29.3 bits (64), Expect = 4.4 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +3 Query: 129 EEFCEDNPETDECRTYD 179 E+FC+ NP +EC+ YD Sbjct: 431 EDFCKTNPADEECKVYD 447
>Q06135:GAS2_YEAST Glycolipid-anchored surface protein 2 precursor - Saccharomyces| cerevisiae (Baker's yeast) Length = 555 Score = 28.9 bits (63), Expect = 5.7 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 105 VTESIKQAEEFCEDNPETDECRTYDS*-PCELVPASAIAGRHHE 233 + + +A E + P+ +C D PCE+VP A +G++ E Sbjct: 370 IAVGVWEANEKLPETPDRSKCACLDEILPCEIVPFGAESGKYEE 413
>Q64566:AT2C1_RAT Calcium-transporting ATPase type 2C member 1 - Rattus norvegicus| (Rat) Length = 919 Score = 28.5 bits (62), Expect = 7.4 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = -1 Query: 354 LVILQTNRCSLYCKPSQIKQQTKLTRPRCQCATEAKLEATAHDD 223 L+++ Y +++ +KL P C C E KLE T D Sbjct: 111 LIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARD 154
>P98194:AT2C1_HUMAN Calcium-transporting ATPase type 2C member 1 - Homo sapiens (Human)| Length = 919 Score = 28.5 bits (62), Expect = 7.4 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = -1 Query: 354 LVILQTNRCSLYCKPSQIKQQTKLTRPRCQCATEAKLEATAHDD 223 L+++ Y +++ +KL P C C E KLE T D Sbjct: 111 LIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARD 154
>Q80XR2:AT2C1_MOUSE Calcium-transporting ATPase type 2C member 1 - Mus musculus (Mouse)| Length = 918 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 321 YCKPSQIKQQTKLTRPRCQCATEAKLEATAHDD 223 Y +++ +KL P C C E KLE T D Sbjct: 122 YRSEKSLEELSKLVPPECHCVREGKLEHTLARD 154
>P57709:AT2C1_BOVIN Calcium-transporting ATPase type 2C member 1 - Bos taurus (Bovine)| Length = 953 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = -1 Query: 354 LVILQTNRCSLYCKPSQIKQQTKLTRPRCQCATEAKLEATAHDD 223 L+++ Y +++ +KL P C C E KLE T D Sbjct: 145 LIVVTVAFVQEYRSEKSLEELSKLMPPECHCVREGKLEHTLARD 188 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 47,845,039 Number of extensions: 767152 Number of successful extensions: 1638 Number of sequences better than 10.0: 12 Number of HSP's gapped: 1638 Number of HSP's successfully gapped: 12 Length of query: 132 Length of database: 100,686,439 Length adjustment: 98 Effective length of query: 34 Effective length of database: 73,805,529 Effective search space: 2509387986 Effective search space used: 2509387986 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)