ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf10n10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102764:Os08g0206600 | 110 | 4e-25 | 2 | AK064336:Os08g0206600 | 110 | 4e-25 | 3 | AK119803:Os03g0619100 | 28 | 3.4 | 4 | AK066496:Os02g0508500 | 28 | 3.4 | 5 | AK073044:Os03g0633800 | 27 | 5.7 | 6 | Os07g0525500:Os07g0525500 | 27 | 7.5 | 7 | Os05g0214700:Os05g0214700 | 27 | 7.5 | 8 | AK101832:Os03g0594700 | 27 | 7.5 | 9 | Os04g0565300:Os04g0565300 | 26 | 9.8 | 10 | AK062850:Os07g0681400 | 26 | 9.8 |
|---|
>AK102764:Os08g0206600 | Length = 601 Score = 110 bits (275), Expect = 4e-25 Identities = 48/56 (85%), Positives = 52/56 (92%) Frame = +3 Query: 3 DAFFPFAWKDAVEEACENGIGTIAQPGGSIRDKDAVECCNKYGVSLLFTGVRHFRH 170 DAFFPFAW DAVEEAC+NGIG IA+P GS+RD DAV+CCNKYGVSLLFTGVRHFRH Sbjct: 546 DAFFPFAWNDAVEEACQNGIGVIAEPSGSMRDGDAVDCCNKYGVSLLFTGVRHFRH 601
>AK064336:Os08g0206600 | Length = 600 Score = 110 bits (275), Expect = 4e-25 Identities = 48/56 (85%), Positives = 52/56 (92%) Frame = +3 Query: 3 DAFFPFAWKDAVEEACENGIGTIAQPGGSIRDKDAVECCNKYGVSLLFTGVRHFRH 170 DAFFPFAW DAVEEAC+NGIG IA+P GS+RD DAV+CCNKYGVSLLFTGVRHFRH Sbjct: 545 DAFFPFAWNDAVEEACQNGIGVIAEPSGSMRDGDAVDCCNKYGVSLLFTGVRHFRH 600
>AK119803:Os03g0619100 | Length = 202 Score = 27.7 bits (60), Expect = 3.4 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -2 Query: 121 LQHSTASLSLMLPPGCAIVPMPFSHASS 38 L S AS SL+LPP C P+P + A+S Sbjct: 13 LPASMASGSLLLPPACLQHPLPAAAAAS 40
>AK066496:Os02g0508500 | Length = 587 Score = 27.7 bits (60), Expect = 3.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 110 DGILVPDAAAGLRDRTDAVLACLLHGVLPGK 18 D + +P+ LRD T + LLH + PGK Sbjct: 44 DKVSLPEIVGHLRDHTKVLDGTLLHWLFPGK 74
>AK073044:Os03g0633800 | Length = 226 Score = 26.9 bits (58), Expect = 5.7 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Frame = +2 Query: 254 IRQAQVV----LRPTRNNCMTAARAFLPRSRHVVSHC*ASSGWVTKVRKPEPCAS 406 + +AQVV +R R +C A +S+ VS C +TK P P AS Sbjct: 66 VAKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAAS 120
>Os07g0525500:Os07g0525500 | Length = 398 Score = 26.6 bits (57), Expect = 7.5 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%) Frame = -1 Query: 272 PPAPVLLRQTSASFR---GRLTNSRPVI*PYGLRLGS 171 P AP +L Q ++ R G+L SR V+ YG LGS Sbjct: 312 PGAPSILDQIESALRLEPGKLAASRKVLREYGNMLGS 348
>Os05g0214700:Os05g0214700 | Length = 1316 Score = 26.6 bits (57), Expect = 7.5 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -2 Query: 298 TVIPSWTQDHLRLSYCDKHPRVSA 227 TV+PS T+ HL +YCDK V + Sbjct: 369 TVVPS-TRGHLHCTYCDKDGHVES 391
>AK101832:Os03g0594700 | Length = 863 Score = 26.6 bits (57), Expect = 7.5 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 6/47 (12%) Frame = -3 Query: 363 LLAQQCDTT*RDLGKNALAAVIQLFLVG------RKTTCACLIATNI 241 +L + C T R G+++L+ + L G +KTTC C+ A ++ Sbjct: 679 ILLEDCGKTRRPNGRSSLSPTSKGILKGTESPSPQKTTCTCMKAASV 725
>Os04g0565300:Os04g0565300 | Length = 995 Score = 26.2 bits (56), Expect = 9.8 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 19/78 (24%) Frame = +3 Query: 261 RRRWSCVQLGITV*RRREHSCLGRVMLYHI---------------AEPAAAG----*PRS 383 RRR + V + +RR C + +YH AEPA G RS Sbjct: 175 RRRPAAVDENLAEGKRRPRICASKARIYHTKGIKTRSLESHPGPPAEPAKGGLRGLPVRS 234 Query: 384 ENQSHVLVKLSRNCVCKK 437 H+ +LS + VC K Sbjct: 235 PTLRHLARQLSHSFVCAK 252
>AK062850:Os07g0681400 | Length = 197 Score = 26.2 bits (56), Expect = 9.8 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -1 Query: 185 LRLGSVPEVADAGEEEGDTVLVAALDGILVPDAAAGLR 72 + + + + DA E D +AA G VPD AAGLR Sbjct: 55 ITVDELAQALDALGLEADRAGLAATVGAHVPDGAAGLR 92 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,850,800 Number of extensions: 264112 Number of successful extensions: 677 Number of sequences better than 10.0: 10 Number of HSP's gapped: 677 Number of HSP's successfully gapped: 10 Length of query: 148 Length of database: 15,399,855 Length adjustment: 91 Effective length of query: 57 Effective length of database: 11,756,124 Effective search space: 670099068 Effective search space used: 670099068 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
