| Clone Name | FLbaf10n10 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os08g10570:12008.t00941:unspliced-genomic bifunctional purine biosynthesis protein purH, putative, expressed| Length = 5368 Score = 115 bits (245), Expect = 2e-25 Identities = 44/52 (84%), Positives = 48/52 (92%) Frame = +3 / +1 Query: 21 AWKDAVEEACENGIGTIAQPGGSIRDKDAVECCNKYGVSLLFTGVRHFRH*A 176 AW DAVEEAC+NGIG IA+P GS+RD DAV+CCNKYGVSLLFTGVRHFRH*A Sbjct: 4960 AWNDAVEEACQNGIGVIAEPSGSMRDGDAVDCCNKYGVSLLFTGVRHFRH*A 5115 Score = 98.7 bits (209), Expect = 2e-20 Identities = 44/52 (84%), Positives = 44/52 (84%) Frame = -2 / -3 Query: 175 AQCLKWRTPVKRRETPYLLQHSTASLSLMLPPGCAIVPMPFSHASSTASFQA 20 AQCLK TPVKRRETPYLLQ STAS SLMLP G AI PMPF HASSTASFQA Sbjct: 5114 AQCLKCLTPVKRRETPYLLQQSTASPSLMLPLGSAITPMPFWHASSTASFQA 4959 Score = 89.5 bits (189), Expect = 1e-17 Identities = 39/50 (78%), Positives = 42/50 (84%) Frame = -1 / -2 Query: 173 SVPEVADAGEEEGDTVLVAALDGILVPDAAAGLRDRTDAVLACLLHGVLP 24 SVPEV DAGEEEGD VLVAA+DG+ VP AAA LRD DAVLA LLHGV+P Sbjct: 5112 SVPEVPDAGEEEGDAVLVAAVDGVAVPHAAARLRDHADAVLARLLHGVVP 4963
>LOC_Os10g39200:12010.t03162:unspliced-genomic expressed protein| Length = 4982 Score = 33.1 bits (66), Expect = 1.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -2 / -2 Query: 325 RQECSRRRHTVIPSWTQDHLRLSYCDKHPRVSAA 224 RQ+CS+ RH + W Q HL + D++ + AA Sbjct: 4408 RQQCSQCRHLELVFWPQHHLHPNLVDQYMLLHAA 4307
>LOC_Os03g62410:12003.t05466:unspliced-genomic phospholipase D gamma 3, putative, expressed| Length = 4702 Score = 33.1 bits (66), Expect = 1.1 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = -1 / -1 Query: 194 PYGLRLGSVPEVADAGEEEGDTVLVAALDGILVPDAAAG 78 P L +G P + D G E D + A D +L PDAAAG Sbjct: 433 PGVLGVGDDPRLRDGGAGEADGDVGVAGDDLLGPDAAAG 317
>LOC_Os03g04169:12003.t00297:unspliced-genomic ATP phosphoribosyltransferase, putative, expressed| Length = 10339 Score = 27.6 bits (54), Expect(2) = 1.5 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = -2 / -2 Query: 343 YNMTRPRQECSRRRHTVIPSW 281 Y TRP C R R +PSW Sbjct: 3123 YACTRPSTACGRHRGRGMPSW 3061 Score = 27.2 bits (53), Expect(2) = 1.5 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -2 / -1 Query: 142 RRETPYLLQHSTASLSLMLPPGCAIVPMPFSHASSTASFQANGKK 8 RR + LL + SLSL L P A + PF+ A G++ Sbjct: 139 RRHSRLLLSALSLSLSLSLSPARAPLSPPFAAAKRQGGGSGGGER 5
>LOC_Os08g45080:12008.t04229:unspliced-genomic expressed protein| Length = 10271 Score = 32.2 bits (64), Expect = 2.1 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 / -1 Query: 316 CSRRRHTVIPSWTQDHLRLSYCDKHPRV 233 CSRRR +IPS TQ+ L Y H V Sbjct: 3464 CSRRRINIIPSITQNSQLLFYLSSHTSV 3381
>LOC_Os04g44460:12004.t03986:unspliced-genomic flavonol sulfotransferase-like, putative, expressed| Length = 1041 Score = 32.2 bits (64), Expect = 2.1 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -2 / +2 Query: 145 KRRETPYLLQHSTASLSLMLPPGCAIVPMPFSHASST 35 + + TP L ++ST+S PPG A P P S +++T Sbjct: 38 RMKSTPKLTRNSTSSSPTRCPPGRAQNPCPSSRSTAT 148
>LOC_Os06g09290:12006.t00808:unspliced-genomic 26S protease regulatory subunit 7, putative, expressed| Length = 3495 Score = 31.8 bits (63), Expect = 2.9 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = -1 / -2 Query: 149 GEEEGDTVLVAALDGILVPDAAAGLRDRTDAVLACLL 39 G EEGD VLV +LV D GLR +L LL Sbjct: 203 GLEEGDVVLVERARVLLVHDVVLGLRRHGSPLLLLLL 93
>LOC_Os01g16840:12001.t01533:unspliced-genomic microneme protein Sm70, putative| Length = 1041 Score = 28.1 bits (55), Expect(2) = 2.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 / +2 Query: 257 RQAQVVLRPTRNNCMTAARAFLPRSRHVVS 346 R+ +VV+ PT + TAA + +PR R V + Sbjct: 686 RRRRVVVTPTPSCLPTAASSLIPRRRRVAA 775 Score = 22.6 bits (43), Expect(2) = 2.9 Identities = 9/30 (30%), Positives = 13/30 (43%) Frame = +3 / +1 Query: 30 DAVEEACENGIGTIAQPGGSIRDKDAVECC 119 D+ EEAC G+ + P + E C Sbjct: 541 DSEEEACGGGLDSELPPDSCVVPDSEEEAC 630 Score = 30.9 bits (61), Expect = 5.5 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 / +2 Query: 218 SVCRGNSRMFVAIRQAQVVLRPTRNNCMTAARAFLPRSRHV 340 S C + + + +R +V + PT + TAA + PR RHV Sbjct: 440 SSCLPAAALSLTLRTRRVAVTPTPSCLPTAASSLTPRRRHV 562
>LOC_Os08g44620:12008.t04186:unspliced-genomic expressed protein| Length = 1854 Score = 31.3 bits (62), Expect = 4.0 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -2 / -1 Query: 157 RTPVKRRETPYLLQHSTASLSLMLPPGCAIVPMPFSHASSTASFQA 20 R P R LL + A+ SL+ PGC + P P S++ + QA Sbjct: 990 RLPCGRAPPFLLLPPAAAASSLVASPGCTVAPRPPVLVSTSCTPQA 853
>LOC_Os04g43350:12004.t03879:unspliced-genomic expressed protein| Length = 2170 Score = 31.3 bits (62), Expect = 4.0 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 / -3 Query: 378 RSENQSHVLVKLSRNCVCKKKKK 446 R+E +LS NC+CKKKKK Sbjct: 1565 RTEPDRE*TYRLSYNCICKKKKK 1497
>LOC_Os03g62460:12003.t05471:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3039 Score = 31.3 bits (62), Expect = 4.0 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -2 / -1 Query: 109 TASLSLMLPPGCAIVPMPFSHASSTASFQAN 17 T+ L L + PGC++VP F SS+ F A+ Sbjct: 1164 TSLLILRVRPGCSLVPSAFVRMSSSRLFDAD 1072
>LOC_Os01g39560:12001.t03483:unspliced-genomic anthocyanin regulatory Lc protein, putative| Length = 6622 Score = 31.3 bits (62), Expect = 4.0 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -2 / +2 Query: 160 WRTPVKRRETPYLLQHSTASLSLMLPPGCAIVPMP 56 W ++ R+ PY + SL+LP G ++ PMP Sbjct: 2 WHLLLQLRKNPYSQGRCNSGSSLLLP*GASVGPMP 106
>LOC_Os11g36930:12011.t03237:unspliced-genomic expressed protein| Length = 5370 Score = 30.9 bits (61), Expect = 5.5 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +2 / -3 Query: 269 VVLRPTRNNCMTAARAFLPRSRHVVSHC 352 +++RP RN+ +TA +A P + VSHC Sbjct: 3241 LLIRPHRNSRVTAPKAQEPEICYAVSHC 3158
>LOC_Os08g29020:12008.t02657:unspliced-genomic wall-associated kinase-like 2, putative, expressed| Length = 4903 Score = 30.9 bits (61), Expect = 5.5 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 / -3 Query: 12 FPFAWKDAVEEACENGIGTIAQP 80 F WK+AVEEA G +AQP Sbjct: 3527 FTSLWKEAVEEAASRGWAGLAQP 3459
>LOC_Os04g58010:12004.t05264:unspliced-genomic B3 DNA binding domain containing protein| Length = 6711 Score = 30.9 bits (61), Expect = 5.5 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -2 / +3 Query: 175 AQCLKWRTPVKRRETPYLLQHSTASLSLM 89 A+C+ W+ PV+ Y L S L+LM Sbjct: 4227 AECMSWKAPVRLNTEAYTLDFSKLVLNLM 4313
>LOC_Os02g29950:12002.t02688:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3482 Score = 30.9 bits (61), Expect = 5.5 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -2 / -3 Query: 91 MLPPGCAIVPMPFSHASSTASFQAN 17 ++ PGC++VP PF SS+ F A+ Sbjct: 900 LVRPGCSLVPSPFVRMSSSRLFGAD 826
>LOC_Os01g66379:12001.t05998:unspliced-genomic expressed protein| Length = 12803 Score = 27.2 bits (53), Expect(2) = 5.9 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = -2 / -3 Query: 343 YNMTRPRQECSRRRHTVIPSWTQDHLRLS 257 Y + P+++ RRH ++P W Q LS Sbjct: 6015 YY*SHPKEKRHSRRHILLPFWHQTQKELS 5929 Score = 25.8 bits (50), Expect(2) = 5.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -2 / -2 Query: 115 HSTASLSLMLPPGCAIVPMPFSHASST 35 HST S+S M GC++ P S T Sbjct: 3067 HSTCSISHMRSQGCSLYQTPLGSKS*T 2987
>LOC_Os10g25487:12010.t01965:unspliced-genomic NBS-LRR disease resistance protein, putative, expressed| Length = 12351 Score = 30.4 bits (60), Expect = 7.6 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 / +1 Query: 361 AGSAM*YNMTRPRQECSRRRHTVIPSW 281 A AM Y TRP C R R +PSW Sbjct: 7114 ARRAMCYACTRPSTACGRHRGRGMPSW 7194
>LOC_Os08g36260:12008.t03366:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3039 Score = 30.4 bits (60), Expect = 7.6 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -2 / -1 Query: 82 PGCAIVPMPFSHASSTASFQAN 17 PGC++VP PF SS+ F A+ Sbjct: 1137 PGCSLVPSPFVRMSSSRLFGAD 1072
>LOC_Os02g30530:12002.t02746:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 3898 Score = 30.4 bits (60), Expect = 7.6 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 / +3 Query: 110 DGILVPDAAAGLRDRTDAVLACLLHGVLPGK 18 D + +P+ LRD T + LLH + PGK Sbjct: 528 DKVSLPEIVGHLRDHTKVLDGTLLHWLFPGK 620
>LOC_Os01g65790:12001.t05940:unspliced-genomic pectinesterase PPE8B precursor, putative, expressed| Length = 4916 Score = 25.8 bits (50), Expect(2) = 8.4 Identities = 17/53 (32%), Positives = 22/53 (41%) Frame = -1 / -1 Query: 227 GRLTNSRPVI*PYGLRLGSVPEVADAGEEEGDTVLVAALDGILVPDAAAGLRD 69 G RPV GLR G V + G+ V A+DG V + G+ D Sbjct: 800 GPRRRGRPVAVALGLRRGPPEGVVAVALQRGEHGDVVAVDGDGVVEVGHGVGD 642 Score = 25.4 bits (49), Expect(2) = 8.4 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -3 / -2 Query: 441 FFFYKRSFCLV*LAHGSGFLTL 376 FFFYK++ * H GF T+ Sbjct: 3211 FFFYKKNINTN*TQHNQGFQTV 3146 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 165,264,639 Number of extensions: 2616907 Number of successful extensions: 9402 Number of sequences better than 10.0: 21 Length of query: 148 Length of database: 55,613,886 Length adjustment: 47 Effective length of query: 101 Effective length of database: 52,968,820 Effective search space: 5349850820 Effective search space used: 5349850820 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)