ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf10n10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os08g10570:12008.t00941:unspliced-genomic bifunctional p... 115 2e-25
2LOC_Os10g39200:12010.t03162:unspliced-genomic expressed protein 33 1.1
3LOC_Os03g62410:12003.t05466:unspliced-genomic phospholipase ... 33 1.1
4LOC_Os03g04169:12003.t00297:unspliced-genomic ATP phosphorib... 28 1.5
5LOC_Os08g45080:12008.t04229:unspliced-genomic expressed protein 32 2.1
6LOC_Os04g44460:12004.t03986:unspliced-genomic flavonol sulfo... 32 2.1
7LOC_Os06g09290:12006.t00808:unspliced-genomic 26S protease r... 32 2.9
8LOC_Os01g16840:12001.t01533:unspliced-genomic microneme prot... 31 2.9
9LOC_Os08g44620:12008.t04186:unspliced-genomic expressed protein 31 4.0
10LOC_Os04g43350:12004.t03879:unspliced-genomic expressed protein 31 4.0
11LOC_Os03g62460:12003.t05471:unspliced-genomic transposon pro... 31 4.0
12LOC_Os01g39560:12001.t03483:unspliced-genomic anthocyanin re... 31 4.0
13LOC_Os11g36930:12011.t03237:unspliced-genomic expressed protein 31 5.5
14LOC_Os08g29020:12008.t02657:unspliced-genomic wall-associate... 31 5.5
15LOC_Os04g58010:12004.t05264:unspliced-genomic B3 DNA binding... 31 5.5
16LOC_Os02g29950:12002.t02688:unspliced-genomic transposon pro... 31 5.5
17LOC_Os01g66379:12001.t05998:unspliced-genomic expressed protein 27 5.9
18LOC_Os10g25487:12010.t01965:unspliced-genomic NBS-LRR diseas... 30 7.6
19LOC_Os08g36260:12008.t03366:unspliced-genomic transposon pro... 30 7.6
20LOC_Os02g30530:12002.t02746:unspliced-genomic transposon pro... 30 7.6
21LOC_Os01g65790:12001.t05940:unspliced-genomic pectinesterase... 26 8.4

>LOC_Os08g10570:12008.t00941:unspliced-genomic bifunctional purine biosynthesis protein purH, putative, expressed|
          Length = 5368
 Score =  115 bits (245), Expect = 2e-25
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = +3 / +1

                                                                
Query: 21   AWKDAVEEACENGIGTIAQPGGSIRDKDAVECCNKYGVSLLFTGVRHFRH*A 176
            AW DAVEEAC+NGIG IA+P GS+RD DAV+CCNKYGVSLLFTGVRHFRH*A
Sbjct: 4960 AWNDAVEEACQNGIGVIAEPSGSMRDGDAVDCCNKYGVSLLFTGVRHFRH*A 5115



 Score = 98.7 bits (209), Expect = 2e-20
 Identities = 44/52 (84%), Positives = 44/52 (84%)
 Frame = -2 / -3

                                                                
Query: 175  AQCLKWRTPVKRRETPYLLQHSTASLSLMLPPGCAIVPMPFSHASSTASFQA 20
            AQCLK  TPVKRRETPYLLQ STAS SLMLP G AI PMPF HASSTASFQA
Sbjct: 5114 AQCLKCLTPVKRRETPYLLQQSTASPSLMLPLGSAITPMPFWHASSTASFQA 4959



 Score = 89.5 bits (189), Expect = 1e-17
 Identities = 39/50 (78%), Positives = 42/50 (84%)
 Frame = -1 / -2

                                                              
Query: 173  SVPEVADAGEEEGDTVLVAALDGILVPDAAAGLRDRTDAVLACLLHGVLP 24
            SVPEV DAGEEEGD VLVAA+DG+ VP AAA LRD  DAVLA LLHGV+P
Sbjct: 5112 SVPEVPDAGEEEGDAVLVAAVDGVAVPHAAARLRDHADAVLARLLHGVVP 4963



to top

>LOC_Os10g39200:12010.t03162:unspliced-genomic expressed protein|
          Length = 4982

 Score = 33.1 bits (66), Expect = 1.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2 / -2

                                              
Query: 325  RQECSRRRHTVIPSWTQDHLRLSYCDKHPRVSAA 224
            RQ+CS+ RH  +  W Q HL  +  D++  + AA
Sbjct: 4408 RQQCSQCRHLELVFWPQHHLHPNLVDQYMLLHAA 4307



to top

>LOC_Os03g62410:12003.t05466:unspliced-genomic phospholipase D gamma 3, putative, expressed|
          Length = 4702

 Score = 33.1 bits (66), Expect = 1.1
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1 / -1

                                                  
Query: 194 PYGLRLGSVPEVADAGEEEGDTVLVAALDGILVPDAAAG 78
           P  L +G  P + D G  E D  +  A D +L PDAAAG
Sbjct: 433 PGVLGVGDDPRLRDGGAGEADGDVGVAGDDLLGPDAAAG 317



to top

>LOC_Os03g04169:12003.t00297:unspliced-genomic ATP phosphoribosyltransferase, putative, expressed|
          Length = 10339

 Score = 27.6 bits (54), Expect(2) = 1.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2 / -2

                                 
Query: 343  YNMTRPRQECSRRRHTVIPSW 281
            Y  TRP   C R R   +PSW
Sbjct: 3123 YACTRPSTACGRHRGRGMPSW 3061



 Score = 27.2 bits (53), Expect(2) = 1.5
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -2 / -1

                                                        
Query: 142 RRETPYLLQHSTASLSLMLPPGCAIVPMPFSHASSTASFQANGKK 8
           RR +  LL   + SLSL L P  A +  PF+ A         G++
Sbjct: 139 RRHSRLLLSALSLSLSLSLSPARAPLSPPFAAAKRQGGGSGGGER 5



to top

>LOC_Os08g45080:12008.t04229:unspliced-genomic expressed protein|
          Length = 10271

 Score = 32.2 bits (64), Expect = 2.1
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2 / -1

                                        
Query: 316  CSRRRHTVIPSWTQDHLRLSYCDKHPRV 233
            CSRRR  +IPS TQ+   L Y   H  V
Sbjct: 3464 CSRRRINIIPSITQNSQLLFYLSSHTSV 3381



to top

>LOC_Os04g44460:12004.t03986:unspliced-genomic flavonol sulfotransferase-like, putative, expressed|
          Length = 1041

 Score = 32.2 bits (64), Expect = 2.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2 / +2

                                                
Query: 145 KRRETPYLLQHSTASLSLMLPPGCAIVPMPFSHASST 35
           + + TP L ++ST+S     PPG A  P P S +++T
Sbjct: 38  RMKSTPKLTRNSTSSSPTRCPPGRAQNPCPSSRSTAT 148



to top

>LOC_Os06g09290:12006.t00808:unspliced-genomic 26S protease regulatory subunit 7, putative, expressed|
          Length = 3495

 Score = 31.8 bits (63), Expect = 2.9
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = -1 / -2

                                                
Query: 149 GEEEGDTVLVAALDGILVPDAAAGLRDRTDAVLACLL 39
           G EEGD VLV     +LV D   GLR     +L  LL
Sbjct: 203 GLEEGDVVLVERARVLLVHDVVLGLRRHGSPLLLLLL 93



to top

>LOC_Os01g16840:12001.t01533:unspliced-genomic microneme protein Sm70, putative|
          Length = 1041

 Score = 28.1 bits (55), Expect(2) = 2.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2 / +2

                                         
Query: 257 RQAQVVLRPTRNNCMTAARAFLPRSRHVVS 346
           R+ +VV+ PT +   TAA + +PR R V +
Sbjct: 686 RRRRVVVTPTPSCLPTAASSLIPRRRRVAA 775



 Score = 22.6 bits (43), Expect(2) = 2.9
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +3 / +1

                                         
Query: 30  DAVEEACENGIGTIAQPGGSIRDKDAVECC 119
           D+ EEAC  G+ +   P   +      E C
Sbjct: 541 DSEEEACGGGLDSELPPDSCVVPDSEEEAC 630



 Score = 30.9 bits (61), Expect = 5.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2 / +2

                                                    
Query: 218 SVCRGNSRMFVAIRQAQVVLRPTRNNCMTAARAFLPRSRHV 340
           S C   + + + +R  +V + PT +   TAA +  PR RHV
Sbjct: 440 SSCLPAAALSLTLRTRRVAVTPTPSCLPTAASSLTPRRRHV 562



to top

>LOC_Os08g44620:12008.t04186:unspliced-genomic expressed protein|
          Length = 1854

 Score = 31.3 bits (62), Expect = 4.0
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -2 / -1

                                                         
Query: 157 RTPVKRRETPYLLQHSTASLSLMLPPGCAIVPMPFSHASSTASFQA 20
           R P  R     LL  + A+ SL+  PGC + P P    S++ + QA
Sbjct: 990 RLPCGRAPPFLLLPPAAAASSLVASPGCTVAPRPPVLVSTSCTPQA 853



to top

>LOC_Os04g43350:12004.t03879:unspliced-genomic expressed protein|
          Length = 2170

 Score = 31.3 bits (62), Expect = 4.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3 / -3

                                   
Query: 378  RSENQSHVLVKLSRNCVCKKKKK 446
            R+E       +LS NC+CKKKKK
Sbjct: 1565 RTEPDRE*TYRLSYNCICKKKKK 1497



to top

>LOC_Os03g62460:12003.t05471:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 3039

 Score = 31.3 bits (62), Expect = 4.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2 / -1

                                           
Query: 109  TASLSLMLPPGCAIVPMPFSHASSTASFQAN 17
            T+ L L + PGC++VP  F   SS+  F A+
Sbjct: 1164 TSLLILRVRPGCSLVPSAFVRMSSSRLFDAD 1072



to top

>LOC_Os01g39560:12001.t03483:unspliced-genomic anthocyanin regulatory Lc protein, putative|
          Length = 6622

 Score = 31.3 bits (62), Expect = 4.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2 / +2

                                              
Query: 160 WRTPVKRRETPYLLQHSTASLSLMLPPGCAIVPMP 56
           W   ++ R+ PY      +  SL+LP G ++ PMP
Sbjct: 2   WHLLLQLRKNPYSQGRCNSGSSLLLP*GASVGPMP 106



to top

>LOC_Os11g36930:12011.t03237:unspliced-genomic expressed protein|
          Length = 5370

 Score = 30.9 bits (61), Expect = 5.5
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2 / -3

                                        
Query: 269  VVLRPTRNNCMTAARAFLPRSRHVVSHC 352
            +++RP RN+ +TA +A  P   + VSHC
Sbjct: 3241 LLIRPHRNSRVTAPKAQEPEICYAVSHC 3158



to top

>LOC_Os08g29020:12008.t02657:unspliced-genomic wall-associated kinase-like 2, putative, expressed|
          Length = 4903

 Score = 30.9 bits (61), Expect = 5.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3 / -3

                                   
Query: 12   FPFAWKDAVEEACENGIGTIAQP 80
            F   WK+AVEEA   G   +AQP
Sbjct: 3527 FTSLWKEAVEEAASRGWAGLAQP 3459



to top

>LOC_Os04g58010:12004.t05264:unspliced-genomic B3 DNA binding domain containing protein|
          Length = 6711

 Score = 30.9 bits (61), Expect = 5.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2 / +3

                                         
Query: 175  AQCLKWRTPVKRRETPYLLQHSTASLSLM 89
            A+C+ W+ PV+     Y L  S   L+LM
Sbjct: 4227 AECMSWKAPVRLNTEAYTLDFSKLVLNLM 4313



to top

>LOC_Os02g29950:12002.t02688:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 3482

 Score = 30.9 bits (61), Expect = 5.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2 / -3

                                    
Query: 91  MLPPGCAIVPMPFSHASSTASFQAN 17
           ++ PGC++VP PF   SS+  F A+
Sbjct: 900 LVRPGCSLVPSPFVRMSSSRLFGAD 826



to top

>LOC_Os01g66379:12001.t05998:unspliced-genomic expressed protein|
          Length = 12803

 Score = 27.2 bits (53), Expect(2) = 5.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2 / -3

                                         
Query: 343  YNMTRPRQECSRRRHTVIPSWTQDHLRLS 257
            Y  + P+++   RRH ++P W Q    LS
Sbjct: 6015 YY*SHPKEKRHSRRHILLPFWHQTQKELS 5929



 Score = 25.8 bits (50), Expect(2) = 5.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2 / -2

                                       
Query: 115  HSTASLSLMLPPGCAIVPMPFSHASST 35
            HST S+S M   GC++   P    S T
Sbjct: 3067 HSTCSISHMRSQGCSLYQTPLGSKS*T 2987



to top

>LOC_Os10g25487:12010.t01965:unspliced-genomic NBS-LRR disease resistance protein, putative, expressed|
          Length = 12351

 Score = 30.4 bits (60), Expect = 7.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -2 / +1

                                       
Query: 361  AGSAM*YNMTRPRQECSRRRHTVIPSW 281
            A  AM Y  TRP   C R R   +PSW
Sbjct: 7114 ARRAMCYACTRPSTACGRHRGRGMPSW 7194



to top

>LOC_Os08g36260:12008.t03366:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 3039

 Score = 30.4 bits (60), Expect = 7.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2 / -1

                                  
Query: 82   PGCAIVPMPFSHASSTASFQAN 17
            PGC++VP PF   SS+  F A+
Sbjct: 1137 PGCSLVPSPFVRMSSSRLFGAD 1072



to top

>LOC_Os02g30530:12002.t02746:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed|
          Length = 3898

 Score = 30.4 bits (60), Expect = 7.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1 / +3

                                          
Query: 110 DGILVPDAAAGLRDRTDAVLACLLHGVLPGK 18
           D + +P+    LRD T  +   LLH + PGK
Sbjct: 528 DKVSLPEIVGHLRDHTKVLDGTLLHWLFPGK 620



to top

>LOC_Os01g65790:12001.t05940:unspliced-genomic pectinesterase PPE8B precursor, putative, expressed|
          Length = 4916

 Score = 25.8 bits (50), Expect(2) = 8.4
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -1 / -1

                                                                
Query: 227 GRLTNSRPVI*PYGLRLGSVPEVADAGEEEGDTVLVAALDGILVPDAAAGLRD 69
           G     RPV    GLR G    V     + G+   V A+DG  V +   G+ D
Sbjct: 800 GPRRRGRPVAVALGLRRGPPEGVVAVALQRGEHGDVVAVDGDGVVEVGHGVGD 642



 Score = 25.4 bits (49), Expect(2) = 8.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3 / -2

                                  
Query: 441  FFFYKRSFCLV*LAHGSGFLTL 376
            FFFYK++    *  H  GF T+
Sbjct: 3211 FFFYKKNINTN*TQHNQGFQTV 3146


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 165,264,639
Number of extensions: 2616907
Number of successful extensions: 9402
Number of sequences better than 10.0: 21
Length of query: 148
Length of database: 55,613,886
Length adjustment: 47
Effective length of query: 101
Effective length of database: 52,968,820
Effective search space: 5349850820
Effective search space used: 5349850820
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
to top