ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf10n06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK241128.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 74 1e-09
2ref|NM_001074026.1| Oryza sativa (japonica cultivar-group) Os11g... 74 1e-09
3gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome... 74 1e-09
4gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome... 74 1e-09
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 74 1e-09
6ref|NM_001074025.1| Oryza sativa (japonica cultivar-group) Os11g... 66 3e-07
7dbj|AK111542.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 3e-07
8dbj|AK243142.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 58 8e-05
9ref|NM_001074212.1| Oryza sativa (japonica cultivar-group) Os11g... 58 8e-05
10gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome... 58 8e-05
11gb|AC152495.1| Zea mays BAC clone Z486N13, complete sequence 56 3e-04
12ref|NM_001074024.1| Oryza sativa (japonica cultivar-group) Os11g... 50 0.020
13ref|NM_001073320.1| Oryza sativa (japonica cultivar-group) Os12g... 46 0.31
14dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.31
15dbj|AK109689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.31
16emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.31
17gb|AC164008.2| Mus musculus chromosome 1, clone RP23-311L17, com... 44 1.2
18gb|AC091613.3| Homo sapiens chromosome 1 clone RP1-54E18, comple... 44 1.2
19emb|AL137858.4| Human DNA sequence from clone RP5-1189N14 on chr... 44 1.2
20gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, com... 44 1.2
21gb|AC103805.7| Homo sapiens chromosome 18, clone RP11-1061K3, co... 44 1.2
22gb|AC191850.3| Rhesus Macaque BAC CH250-135L17 () complete sequ... 42 4.8
23gb|AC148830.3| Pan troglodytes BAC clone CH251-76M5 from chromos... 42 4.8
24gb|AC146971.16| Medicago truncatula clone mth2-128d1, complete s... 42 4.8
25gb|AC083884.6| Homo sapiens BAC clone RP11-813J7 from 7, complet... 42 4.8
26gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosom... 42 4.8
27gb|AC127254.3| Mus musculus BAC clone RP24-290D19 from chromosom... 42 4.8
28gb|AC150910.4| Pan troglodytes BAC clone CH251-484K21 from chrom... 42 4.8
29gb|AC106822.3| Homo sapiens chromosome 5 clone RP11-772C9, compl... 42 4.8
30gb|AC004883.3| Homo sapiens PAC clone RP4-771P4 from 7q11.2, com... 42 4.8
31gb|AF411057.1| Homo sapiens clone BAC_22606 CD28 antigen (CD28) ... 42 4.8
32emb|AL158196.24| Human DNA sequence from clone RP11-90M2 on chro... 42 4.8
33gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complet... 42 4.8
34gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, comple... 42 4.8
35dbj|AP004905.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 4.8
36gb|AC025500.8| Mus musculus chromosome 9, clone RP23-47M24, comp... 42 4.8
37emb|AL929390.14| Mouse DNA sequence from clone RP23-107J3 on chr... 42 4.8
38gb|AC006142.1|AC006142 Homo sapiens PAC clone RP4-572A3, complet... 42 4.8
39gb|AF225899.1|AF225899 Homo sapiens PAC clone 219d7, complete se... 42 4.8
40emb|AJ002364.1|MMAJ2364 Mus musculus interleukin-18 gene, promot... 42 4.8
41emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on ch... 42 4.8 
>dbj|AK241128.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065096M08,
           full insert sequence
          Length = 2546
 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                       
Query: 173 gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
           |||||||||||||| |  ||||||||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 657 gacaaaccaaaatctgcaatttttggcaccatgttgttgtctagcaaaatattggcaggc 598

                                
Query: 233 tttaggtctaagtggtgaata 253
           |||||||| || |||| ||||
Sbjct: 597 tttaggtccaaatggtaaata 577
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>ref|NM_001074026.1| Oryza sativa (japonica cultivar-group) Os11g0213000 (Os11g0213000)
           mRNA, complete cds
          Length = 1860

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                       
Query: 173 gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
           |||||||||||||| |  ||||||||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 584 gacaaaccaaaatctgcaatttttggcaccatgttgttgtctagcaaaatattggcaggc 525

                                
Query: 233 tttaggtctaagtggtgaata 253
           |||||||| || |||| ||||
Sbjct: 524 tttaggtccaaatggtaaata 504
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>gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034O04, complete sequence
          Length = 164882

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                         
Query: 173   gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
             |||||||||||||| |  ||||||||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 11453 gacaaaccaaaatctgcaatttttggcaccatgttgttgtctagcaaaatattggcaggc 11512

                                  
Query: 233   tttaggtctaagtggtgaata 253
             |||||||| || |||| ||||
Sbjct: 11513 tttaggtccaaatggtaaata 11533
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>gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0033E08,
              complete sequence
          Length = 149241

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                          
Query: 173    gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
              |||||||||||||| |  ||||||||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 137126 gacaaaccaaaatctgcaatttttggcaccatgttgttgtctagcaaaatattggcaggc 137185

                                   
Query: 233    tttaggtctaagtggtgaata 253
              |||||||| || |||| ||||
Sbjct: 137186 tttaggtccaaatggtaaata 137206



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                          
Query: 173    gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
              |||||||||||||| |  ||||| ||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 123755 gacaaaccaaaatctgcaattttcggcaccatgttgttgtctagcaaaatattggcaggc 123814

                                   
Query: 233    tttaggtctaagtggtgaata 253
              |||||||| || |||| ||||
Sbjct: 123815 tttaggtccaaatggtaaata 123835



 Score = 50.1 bits (25), Expect = 0.020
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 173   gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatt 225
             ||||| ||||||||||  | ||||||||||||||| | ||| |||||||||||
Sbjct: 97589 gacaatccaaaatccgcaagttttggcaccatgttcttgtccagcaatatatt 97641
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                           
Query: 173     gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
               |||||||||||||| |  ||||||||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 5801569 gacaaaccaaaatctgcaatttttggcaccatgttgttgtctagcaaaatattggcaggc 5801628

                                    
Query: 233     tttaggtctaagtggtgaata 253
               |||||||| || |||| ||||
Sbjct: 5801629 tttaggtccaaatggtaaata 5801649



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                           
Query: 173     gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
               |||||||||||||| |  ||||| ||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 5788198 gacaaaccaaaatctgcaattttcggcaccatgttgttgtctagcaaaatattggcaggc 5788257

                                    
Query: 233     tttaggtctaagtggtgaata 253
               |||||||| || |||| ||||
Sbjct: 5788258 tttaggtccaaatggtaaata 5788278



 Score = 58.0 bits (29), Expect = 8e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                        
Query: 191     atttttggcaccatgttttcgtctagcaatatatttgcaggttttaggtctaagtgg 247
               ||||||||| ||||||| || || ||||||| ||| |||||||| ||||||||||||
Sbjct: 9626447 atttttggctccatgttctcatcaagcaatacattggcaggtttcaggtctaagtgg 9626503



 Score = 50.1 bits (25), Expect = 0.020
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 173     gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatt 225
               ||||| ||||||||||  | ||||||||||||||| | ||| |||||||||||
Sbjct: 5762032 gacaatccaaaatccgcaagttttggcaccatgttcttgtccagcaatatatt 5762084
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>ref|NM_001074025.1| Oryza sativa (japonica cultivar-group) Os11g0212900 (Os11g0212900)
           mRNA, partial cds
          Length = 2740

 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 173 gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
           |||||||||||||| |  ||||| ||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 795 gacaaaccaaaatctgcaattttcggcaccatgttgttgtctagcaaaatattggcaggc 736

                                
Query: 233 tttaggtctaagtggtgaata 253
           |||||||| || |||| ||||
Sbjct: 735 tttaggtccaaatggtaaata 715
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>dbj|AK111542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037N20, full
           insert sequence
          Length = 2741

 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 173 gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
           |||||||||||||| |  ||||| ||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 795 gacaaaccaaaatctgcaattttcggcaccatgttgttgtctagcaaaatattggcaggc 736

                                
Query: 233 tttaggtctaagtggtgaata 253
           |||||||| || |||| ||||
Sbjct: 735 tttaggtccaaatggtaaata 715
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>dbj|AK243142.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100031J10, full
            insert sequence
          Length = 2008

 Score = 58.0 bits (29), Expect = 8e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 191  atttttggcaccatgttttcgtctagcaatatatttgcaggttttaggtctaagtgg 247
            ||||||||| ||||||| || || ||||||| ||| |||||||| ||||||||||||
Sbjct: 1430 atttttggctccatgttctcatcaagcaatacattggcaggtttcaggtctaagtgg 1374
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>ref|NM_001074212.1| Oryza sativa (japonica cultivar-group) Os11g0274700 (Os11g0274700)
            mRNA, complete cds
          Length = 3108

 Score = 58.0 bits (29), Expect = 8e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 191  atttttggcaccatgttttcgtctagcaatatatttgcaggttttaggtctaagtgg 247
            ||||||||| ||||||| || || ||||||| ||| |||||||| ||||||||||||
Sbjct: 1328 atttttggctccatgttctcatcaagcaatacattggcaggtttcaggtctaagtgg 1272
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>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06,
              complete sequence
          Length = 172126

 Score = 58.0 bits (29), Expect = 8e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                       
Query: 191    atttttggcaccatgttttcgtctagcaatatatttgcaggttttaggtctaagtgg 247
              ||||||||| ||||||| || || ||||||| ||| |||||||| ||||||||||||
Sbjct: 123230 atttttggctccatgttctcatcaagcaatacattggcaggtttcaggtctaagtgg 123174
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>gb|AC152495.1| Zea mays BAC clone Z486N13, complete sequence
          Length = 169348

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 173 gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatttgcaggt 232
           |||| |||||||||||  ||||||||||||||||| ||||| || | |||||||  ||||
Sbjct: 422 gacagaccaaaatccgcgatttttggcaccatgttatcgtcaagaagtatattttgaggt 363

                   
Query: 233 tttaggtc 240
           || |||||
Sbjct: 362 ttgaggtc 355
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>ref|NM_001074024.1| Oryza sativa (japonica cultivar-group) Os11g0212300 (Os11g0212300)
           mRNA, complete cds
          Length = 2109

 Score = 50.1 bits (25), Expect = 0.020
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 173 gacaaaccaaaatccgtcatttttggcaccatgttttcgtctagcaatatatt 225
           ||||| ||||||||||  | ||||||||||||||| | ||| |||||||||||
Sbjct: 539 gacaatccaaaatccgcaagttttggcaccatgttcttgtccagcaatatatt 487
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>ref|NM_001073320.1| Oryza sativa (japonica cultivar-group) Os12g0486900 (Os12g0486900)
           mRNA, complete cds
          Length = 1483

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 170 cttgacaaaccaaaatccgtcatttttggcaccat 204
           |||||||||||||||||||  ||||| ||||||||
Sbjct: 271 cttgacaaaccaaaatccgcaattttaggcaccat 237
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 170      cttgacaaaccaaaatccgtcatttttggcaccat 204
                |||||||||||||||||||  ||||| ||||||||
Sbjct: 18157520 cttgacaaaccaaaatccgcaattttaggcaccat 18157486
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>dbj|AK109689.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-E02, full
           insert sequence
          Length = 1483

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 170 cttgacaaaccaaaatccgtcatttttggcaccat 204
           |||||||||||||||||||  ||||| ||||||||
Sbjct: 271 cttgacaaaccaaaatccgcaattttaggcaccat 237
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>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 155927

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 170    cttgacaaaccaaaatccgtcatttttggcaccat 204
              |||||||||||||||||||  ||||| ||||||||
Sbjct: 111198 cttgacaaaccaaaatccgcaattttaggcaccat 111164
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>gb|AC164008.2| Mus musculus chromosome 1, clone RP23-311L17, complete sequence
          Length = 171582

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1194   taaatggcaatattctgtacag 1215
              ||||||||||||||||||||||
Sbjct: 114304 taaatggcaatattctgtacag 114283
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>gb|AC091613.3| Homo sapiens chromosome 1 clone RP1-54E18, complete sequence
          Length = 144302

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1190 ataataaatggcaatattctgt 1211
            ||||||||||||||||||||||
Sbjct: 1611 ataataaatggcaatattctgt 1590
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>emb|AL137858.4| Human DNA sequence from clone RP5-1189N14 on chromosome 1p21.3-22.3
             Contains an STS and GSSs, complete sequence
          Length = 99358

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1190  ataataaatggcaatattctgt 1211
             ||||||||||||||||||||||
Sbjct: 46360 ataataaatggcaatattctgt 46339
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>gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, complete sequence
          Length = 197439

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1194   taaatggcaatattctgtacag 1215
              ||||||||||||||||||||||
Sbjct: 190650 taaatggcaatattctgtacag 190671
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>gb|AC103805.7| Homo sapiens chromosome 18, clone RP11-1061K3, complete sequence
          Length = 184147

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 613   caaagccaggctattgcttcaa 634
             ||||||||||||||||||||||
Sbjct: 48876 caaagccaggctattgcttcaa 48897
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>gb|AC191850.3| Rhesus Macaque  BAC CH250-135L17 () complete sequence
          Length = 165078

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 421   atgaatgctttgattatgcat 441
             |||||||||||||||||||||
Sbjct: 78890 atgaatgctttgattatgcat 78870
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>gb|AC148830.3| Pan troglodytes BAC clone CH251-76M5 from chromosome 7, complete
             sequence
          Length = 162770

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 622   gctattgcttcaaaacagttt 642
             |||||||||||||||||||||
Sbjct: 39656 gctattgcttcaaaacagttt 39676
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>gb|AC146971.16| Medicago truncatula clone mth2-128d1, complete sequence
          Length = 125569

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   tggcttgactttgcttttctt 161
             |||||||||||||||||||||
Sbjct: 51437 tggcttgactttgcttttctt 51417
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>gb|AC083884.6| Homo sapiens BAC clone RP11-813J7 from 7, complete sequence
          Length = 169604

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 622   gctattgcttcaaaacagttt 642
             |||||||||||||||||||||
Sbjct: 42034 gctattgcttcaaaacagttt 42014
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>gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosome 7, complete sequence
          Length = 186032

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 479   aatttgtaaggtttttattat 499
             |||||||||||||||||||||
Sbjct: 83344 aatttgtaaggtttttattat 83324
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>gb|AC127254.3| Mus musculus BAC clone RP24-290D19 from chromosome 9, complete sequence
          Length = 187995

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 149    ctttgcttttcttcaaagcat 169
              |||||||||||||||||||||
Sbjct: 171875 ctttgcttttcttcaaagcat 171855
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>gb|AC150910.4| Pan troglodytes BAC clone CH251-484K21 from chromosome 7, complete
             sequence
          Length = 164629

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 622   gctattgcttcaaaacagttt 642
             |||||||||||||||||||||
Sbjct: 24563 gctattgcttcaaaacagttt 24543
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>gb|AC106822.3| Homo sapiens chromosome 5 clone RP11-772C9, complete sequence
          Length = 115988

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 414    aaggaagatgaatgctttgat 434
              |||||||||||||||||||||
Sbjct: 107310 aaggaagatgaatgctttgat 107330
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>gb|AC004883.3| Homo sapiens PAC clone RP4-771P4 from 7q11.2, complete sequence
          Length = 131359

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 622   gctattgcttcaaaacagttt 642
             |||||||||||||||||||||
Sbjct: 92443 gctattgcttcaaaacagttt 92463
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>gb|AF411057.1| Homo sapiens clone BAC_22606 CD28 antigen (CD28) gene, exons 1, 2 and
             3, and partial cds
          Length = 66887

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   atatttctaggagaaagcaca 564
             |||||||||||||||||||||
Sbjct: 27598 atatttctaggagaaagcaca 27618
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>emb|AL158196.24| Human DNA sequence from clone RP11-90M2 on chromosome 13 Contains gene
             FLJ10956, the gene for HSPC126 protein (DRIP36), a novel
             gene similar to polymerase (RNA) II (DNA directed)
             polypeptide K, 7.0kDa (POLR2K), a novel gene and two CpG
             islands, complete sequence
          Length = 152594

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1107  aggaatcctttatagtttatt 1127
             |||||||||||||||||||||
Sbjct: 90675 aggaatcctttatagtttatt 90695
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>gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complete sequence
          Length = 167011

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 279   ttcacaaatttgctgattattttgt 303
             |||||||||||||| ||||||||||
Sbjct: 94329 ttcacaaatttgctaattattttgt 94305
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>gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, complete sequence
          Length = 196622

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   atatttctaggagaaagcaca 564
             |||||||||||||||||||||
Sbjct: 84132 atatttctaggagaaagcaca 84152
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>dbj|AP004905.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06B17, TM0064a,
            complete sequence
          Length = 14870

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 386  agatggaaaagtttaacaaaa 406
            |||||||||||||||||||||
Sbjct: 1708 agatggaaaagtttaacaaaa 1728
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>gb|AC025500.8| Mus musculus chromosome 9, clone RP23-47M24, complete sequence
          Length = 112924

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   ctttgcttttcttcaaagcat 169
             |||||||||||||||||||||
Sbjct: 16934 ctttgcttttcttcaaagcat 16914
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>emb|AL929390.14| Mouse DNA sequence from clone RP23-107J3 on chromosome 4, complete
             sequence
          Length = 146977

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 704   acaaggtatgtatatatcata 724
             |||||||||||||||||||||
Sbjct: 84824 acaaggtatgtatatatcata 84844
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>gb|AC006142.1|AC006142 Homo sapiens PAC clone RP4-572A3, complete sequence
          Length = 143623

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 414   aaggaagatgaatgctttgat 434
             |||||||||||||||||||||
Sbjct: 60306 aaggaagatgaatgctttgat 60326
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>gb|AF225899.1|AF225899 Homo sapiens PAC clone 219d7, complete sequence
          Length = 106539

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   atatttctaggagaaagcaca 564
             |||||||||||||||||||||
Sbjct: 26767 atatttctaggagaaagcaca 26787
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>emb|AJ002364.1|MMAJ2364 Mus musculus interleukin-18 gene, promoter region and exon 1
          Length = 2806

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 149 ctttgcttttcttcaaagcat 169
           |||||||||||||||||||||
Sbjct: 431 ctttgcttttcttcaaagcat 411
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>emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on chromosome 4, complete
            sequence
          Length = 208663

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1185 ctgagataataaatggcaatattct 1209
            |||||| ||||||||||||||||||
Sbjct: 3851 ctgagaaaataaatggcaatattct 3875


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 256,315,501
Number of extensions: 13916079
Number of successful extensions: 296793
Number of sequences better than 10.0: 41
Number of HSP's gapped: 296793
Number of HSP's successfully gapped: 46
Length of query: 1275
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1252
Effective length of database: 18,503,978,556
Effective search space: 23166981152112
Effective search space used: 23166981152112
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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