ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf7p01 |
|---|---|
| Clone Library Name | barley_pub |
>Os01g0108400:Os01g0108400 | Length = 234 Score = 148 bits (373), Expect = 8e-36 Identities = 92/184 (50%), Positives = 114/184 (61%), Gaps = 12/184 (6%) Frame = +3 Query: 228 MKALCEKLASLIPREHCCST---TDTMTQLGSLDVGASYIKKLKERVDELQ-RRMTSAQT 395 MK LC KLASLIP+EHC + + TQLGSLD A+YIKKLKERVDEL +R + T Sbjct: 47 MKGLCVKLASLIPKEHCSMSKMQAASRTQLGSLDEAAAYIKKLKERVDELHHKRSMMSIT 106 Query: 396 LDTFRGDTSIXXXXXXXXXKSAVGSLEEEKA----REASAPVLQVRQHDDS----SMEVR 551 R S G EEE+ A+A V++VRQH S++V Sbjct: 107 SSRCRSGGGGGPAAAAGQSTSGGGGGEEEEEDMTRTTAAAAVVEVRQHVQEGSLISLDVV 166 Query: 552 LICCMKRPIKLHEVITIHEEEGAEIINANHSVAGQKMFYTIHSRASSSRIGIDVPRVSER 731 LIC RP+K H+VIT+ EEEGA+II+AN S+A +YTI+SRA SSRIGI+ R+SER Sbjct: 167 LICSAARPVKFHDVITVLEEEGADIISANFSLAAHNFYYTIYSRAFSSRIGIEASRISER 226 Query: 732 LRAL 743 LRAL Sbjct: 227 LRAL 230
>AK109432:Os01g0108600 | Length = 224 Score = 109 bits (273), Expect = 3e-24 Identities = 76/196 (38%), Positives = 101/196 (51%), Gaps = 20/196 (10%) Frame = +3 Query: 228 MKALCEKLASLIP-----REHC-----------CSTTDTMTQLGSLDVGASYIKKLKERV 359 MK LC KL+SLIP R H ST + +TQL L+ A+YIK+LK R+ Sbjct: 52 MKGLCLKLSSLIPAAAPRRHHHHYSTSSSSSPPSSTKEAVTQLDHLEQAAAYIKQLKGRI 111 Query: 360 DELQRRMTSAQTLDTFRGDTSIXXXXXXXXXKSAVGSLEEEKAREASAPVLQVRQHDDSS 539 DEL++R A L T PV++VR D + Sbjct: 112 DELKKRKQQAAALTT-----------------------STSNGGGGGMPVVEVRCQDGTL 148 Query: 540 MEVRLICCMK----RPIKLHEVITIHEEEGAEIINANHSVAGQKMFYTIHSRASSSRIGI 707 V + ++ R ++LHEVI + EEEGAE++NA+ SV G K+FYT+HS+A SRIG+ Sbjct: 149 DVVVVSEAIREERERAVRLHEVIGVLEEEGAEVVNASFSVVGDKIFYTLHSQALCSRIGL 208 Query: 708 DVPRVSERLRALLQLY 755 D RVS RLR LL Y Sbjct: 209 DASRVSHRLRNLLLQY 224
>AK070332:Os01g0108600 | Length = 216 Score = 46.6 bits (109), Expect = 3e-05 Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 16/70 (22%) Frame = +3 Query: 228 MKALCEKLASLIP-----REHC-----------CSTTDTMTQLGSLDVGASYIKKLKERV 359 MK LC KL+SLIP R H ST + +TQL L+ A+YIK+LK R+ Sbjct: 52 MKGLCLKLSSLIPAAAPRRHHHHYSTSSSSSPPSSTKEAVTQLDHLEQAAAYIKQLKGRI 111 Query: 360 DELQRRMTSA 389 DEL++R A Sbjct: 112 DELKKRKQQA 121
>AK073385:Os01g0952800 | Length = 247 Score = 38.9 bits (89), Expect = 0.007 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 4/143 (2%) Frame = +3 Query: 333 YIKKLKERVDELQRRMTSAQTLDTFRGDTSIXXXXXXXXXKSAVGSLEEEKAREASAPVL 512 YI +L+++V+ L+R+ T T G L + E AP++ Sbjct: 115 YIPELQKQVENLERKKKELTTTST---------------TNCKPGVLGSQLMSEGMAPIV 159 Query: 513 QVRQHDDSSMEVRLICCMK---RPIKLHEVITIHEEEGAEIINANHSVA-GQKMFYTIHS 680 +D + V++ + L + I + E EG I+++ S G + FY+IH Sbjct: 160 SATCINDMEIMVQVSLLSNVAGSVLPLSKCIKVLENEGLHFISSSTSSGFGNRTFYSIHL 219 Query: 681 RASSSRIGIDVPRVSERLRALLQ 749 + S I + P ERL +++ Sbjct: 220 QRSEGTINEECPAFCERLEKVVR 242
>Os05g0222100:Os05g0222100 | Length = 1431 Score = 28.9 bits (63), Expect(2) = 0.091 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 1021 MFSSHHVIGKSEEECLSVSDYFNKVKELVDTMAMLVSPLAEKK 1149 MFS G + +S+S+Y K++ L D MA PL E++ Sbjct: 121 MFSCKSKAGTINKGPMSMSEYIAKMRSLADKMAATGKPLDEEE 163 Score = 25.0 bits (53), Expect(2) = 0.091 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +3 Query: 879 VANHECESWVEQDQVMWSSLLASISPELLE 968 + N E ++W QDQ + + +S+S E+L+ Sbjct: 74 IPNPEYKTWFVQDQQVLGFIFSSLSREVLQ 103
>Os12g0132600:Os12g0132600 | Length = 358 Score = 32.7 bits (73), Expect = 0.50 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +3 Query: 768 QAPSCMHNNQVLRYNDGANATPPKELVGNNDIGGTN-KVANHECESWVEQDQVMWSSLLA 944 Q + + Q+ + D + P K +V + G T KV N WV Q+Q + S LL Sbjct: 32 QVLAALRGAQLAGFLDNSIKPPSKMVVLQDKDGNTGEKVVNAAYTQWVAQEQQVLSYLLM 91 Query: 945 SISPELL 965 S+S E+L Sbjct: 92 SLSREVL 98
>AK068842:Os04g0448200 | Length = 635 Score = 32.7 bits (73), Expect = 0.50 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Frame = +1 Query: 928 GVPCLRQYHQSC--SSRCEMCQPWLSTCLHLWCMFSSHHVIGKSEEECLSVSDYFNKVKE 1101 GV C+ SC ++ CE Q LS + + H V + +E LS + FN E Sbjct: 460 GVKCMEHGSSSCEEANSCEGSQQHLSDNEEINPPWEPHDVFDEGMQEVLSDNRDFNSSSE 519 Query: 1102 LVDTMAMLVSP 1134 + DT + + P Sbjct: 520 IADTQDVYMKP 530
>AK060713:Os04g0448200 | Length = 319 Score = 32.7 bits (73), Expect = 0.50 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Frame = +1 Query: 928 GVPCLRQYHQSC--SSRCEMCQPWLSTCLHLWCMFSSHHVIGKSEEECLSVSDYFNKVKE 1101 GV C+ SC ++ CE Q LS + + H V + +E LS + FN E Sbjct: 152 GVKCMEHGSSSCEEANSCEGSQQHLSDNEEINPPWEPHDVFDEGMQEVLSDNRDFNSSSE 211 Query: 1102 LVDTMAMLVSP 1134 + DT + + P Sbjct: 212 IADTQDVYMKP 222
>AK107580:Os02g0671800 | Length = 572 Score = 32.3 bits (72), Expect = 0.65 Identities = 21/63 (33%), Positives = 30/63 (47%) Frame = +3 Query: 807 YNDGANATPPKELVGNNDIGGTNKVANHECESWVEQDQVMWSSLLASISPELLE*V*DVS 986 Y DG PP ++ D +V N WV Q+Q + S LL S+S ++L V + Sbjct: 4 YIDGTKEEPPATIITKKDDKDV-RVTNPAHTEWVAQEQQVLSYLLLSLSRDVLIQVVSIP 62 Query: 987 TMV 995 T V Sbjct: 63 TAV 65
>AK100914:Os07g0252400 | Length = 1092 Score = 32.0 bits (71), Expect = 0.85 Identities = 21/55 (38%), Positives = 30/55 (54%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 VDTS T +S +GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 962 VDTSFTVTSKAGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 1006
>AK059649:Os07g0252400 | Length = 226 Score = 32.0 bits (71), Expect = 0.85 Identities = 21/55 (38%), Positives = 30/55 (54%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 VDTS T +S +GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 96 VDTSFTVTSKAGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 140
>Os01g0903400:Os01g0903400 | Length = 1537 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +3 Query: 768 QAPSCMHNNQVLRYNDGANATPPKELVGNNDIGGTNKVANHECESWVEQDQVMWSSLLAS 947 Q + +H ++L Y +G P E+ D G T N E W DQ++ LL+S Sbjct: 240 QVSAAVHGARLLGYLNGDIKAPNAEISVTID-GKTTTKPNPAFEDWEANDQLVLGYLLSS 298 Query: 948 ISPELL 965 +S ++L Sbjct: 299 LSRDVL 304
>AK121193:Os07g0424400 | Length = 1093 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 +DTS T +S GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 963 IDTSFTVTSKGGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 1007
>AK101178:Os03g0837100 | Length = 690 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 +DTS T +S GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 560 IDTSFTVTSKGGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 604
>AK100877:Os03g0837100 | Length = 1092 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 +DTS T +S GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 962 IDTSFTVTSKGGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 1006
>AK073561:Os07g0424400 | Length = 1093 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 +DTS T +S GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 963 IDTSFTVTSKGGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 1007
>AK071976:Os07g0424400 | Length = 446 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 +DTS T +S GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 316 IDTSFTVTSKGGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 360
>AK067386:Os07g0424400 | Length = 837 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 +DTS T +S GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 707 IDTSFTVTSKGGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 751
>AK062154:Os07g0424400 | Length = 411 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 +DTS T +S GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 281 IDTSFTVTSKGGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 325
>AK060814:Os03g0837100 | Length = 194 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVA 824 +DTS T +S GD + EL+ + W TLL+PP +LL + +G VA Sbjct: 64 IDTSFTVTSKGGDDEEFSELY---------TFKW-TTLLIPPTTLLLLNFIGVVA 108
>Os07g0659400:Os07g0659400 | Length = 304 Score = 30.0 bits (66), Expect = 3.2 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 Query: 452 RGSGGSGRWDASVSSESIQGLRRGHP 375 RG GG GRW + ++E+ G+ R P Sbjct: 25 RGGGGEGRWMGTATAEAAAGIARWEP 50
>AK099014:Os08g0152500 | Length = 268 Score = 30.0 bits (66), Expect = 3.2 Identities = 23/66 (34%), Positives = 34/66 (51%) Frame = +3 Query: 453 KSAVGSLEEEKAREASAPVLQVRQHDDSSMEVRLICCMKRPIKLHEVITIHEEEGAEIIN 632 K V + + A E S + V+QH +SM + L K K+HEV T+H E+ + I Sbjct: 28 KDGVDEMIKYVANEPSVGLYFVQQHAQASMPLLLDVKGKVAEKIHEV-TLHTEDIEDSIC 86 Query: 633 ANHSVA 650 A S+A Sbjct: 87 AVRSMA 92
>AK060448:Os08g0152500 | Length = 268 Score = 30.0 bits (66), Expect = 3.2 Identities = 23/66 (34%), Positives = 34/66 (51%) Frame = +3 Query: 453 KSAVGSLEEEKAREASAPVLQVRQHDDSSMEVRLICCMKRPIKLHEVITIHEEEGAEIIN 632 K V + + A E S + V+QH +SM + L K K+HEV T+H E+ + I Sbjct: 28 KDGVDEMIKYVANEPSVGLYFVQQHAQASMPLLLDVKGKVAEKIHEV-TLHTEDIEDSIC 86 Query: 633 ANHSVA 650 A S+A Sbjct: 87 AVRSMA 92
>AK065447: | Length = 879 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = +3 Query: 711 VPRVSERLRALLQLYSHENQAPSCMHNNQVLRYNDGA--NAT--PPKELVGNN 857 +PRVSE LRA L ++ H N + Y N T KE+VG N Sbjct: 120 IPRVSEELRAALSVFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRN 172
>AJ252142:Os11g0102200 | Length = 921 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = +3 Query: 711 VPRVSERLRALLQLYSHENQAPSCMHNNQVLRYNDGA--NAT--PPKELVGNN 857 +PRVSE LRA L ++ H N + Y N T KE+VG N Sbjct: 120 IPRVSEELRAALSVFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRN 172
>AK106806:Os01g0123000 | Length = 360 Score = 28.9 bits (63), Expect = 7.2 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Frame = +3 Query: 684 ASSSRIGIDVPRVSERLRALLQLYSH---ENQAPSCMHNNQVLRYNDGANATPPKELV-- 848 +SSS I P V ++ L ++ Q + + ++ + G PP E+ Sbjct: 3 SSSSSIAATNPLVGIQVSEKLTKQNYALWSAQVLTALRGARLEGFISGKTTPPPAEIEKK 62 Query: 849 -GNNDIGG-TNKVANHECESWVEQDQVMWSSLLASISPELLE*V*DVSTMVE 998 G+ G T K+AN + W DQ + L +S+S E+L V +T + Sbjct: 63 EGDKKEGEKTIKIANPAVDEWFATDQQVLGFLFSSLSREILSQVAGATTAAQ 114
>AK101423:Os02g0760200 | Length = 1037 Score = 28.9 bits (63), Expect = 7.2 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -2 Query: 845 ELLGRSRVGPIIVPEDL--IVVHARRCLIFMRIKLEQCSQSFRNPWNIYANSRARGPRVY 672 +L R+ VGP VPEDL ++ +R L +R ++E +S+ + NS A G R+ Sbjct: 815 KLTKRNSVGPYTVPEDLGILLNTMKRLLDVLRPRIESHLKSWSSCMPNGGNSAAIGERLS 874 Query: 671 SV 666 V Sbjct: 875 EV 876
>AK065596:Os12g0101800 | Length = 921 Score = 28.9 bits (63), Expect = 7.2 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Frame = +3 Query: 711 VPRVSERLRALLQLYSHENQAPSCMHNNQVLRYNDGA--NAT--PPKELVGNN 857 +PRVSE LRA L + H N + Y N T KE+VG N Sbjct: 120 IPRVSEELRAALSAFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRN 172
>AK064266:Os05g0450600 | Length = 471 Score = 28.9 bits (63), Expect = 7.2 Identities = 10/35 (28%), Positives = 20/35 (57%) Frame = -3 Query: 1027 RTCTTNVDKCSTMVDTSHTYSSNSGDIDASRELHI 923 R C + +C++ ++SSNSG + +SR ++ Sbjct: 364 RGCNARMQRCNSNASARSSFSSNSGGLGSSRRSYV 398
>AK063964:Os02g0760200 | Length = 356 Score = 28.9 bits (63), Expect = 7.2 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -2 Query: 845 ELLGRSRVGPIIVPEDL--IVVHARRCLIFMRIKLEQCSQSFRNPWNIYANSRARGPRVY 672 +L R+ VGP VPEDL ++ +R L +R ++E +S+ + NS A G R+ Sbjct: 134 KLTKRNSVGPYTVPEDLGILLNTMKRLLDVLRPRIESHLKSWSSCMPNGGNSAAIGERLS 193 Query: 671 SV 666 V Sbjct: 194 EV 195
>AB018444:Os12g0101800 | Length = 921 Score = 28.9 bits (63), Expect = 7.2 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Frame = +3 Query: 711 VPRVSERLRALLQLYSHENQAPSCMHNNQVLRYNDGA--NAT--PPKELVGNN 857 +PRVSE LRA L + H N + Y N T KE+VG N Sbjct: 120 IPRVSEELRAALSAFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRN 172
>AK068416:Os03g0223700 | Length = 711 Score = 28.5 bits (62), Expect = 9.4 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = -3 Query: 1063 ILPQICQLHDERRTCT--TNVDKCSTMVDTSHTYSSNSGDIDASRELHITWSCSTQDSHS 890 ILP I ++ R TN + C+ D + + + A REL+ + +S Sbjct: 302 ILPCISDQEEKIRVVARETNEELCAIKADPTEGFDIGAILSIAKRELNSEHEATRIESLH 361 Query: 889 WFATLLV 869 WF+TLLV Sbjct: 362 WFSTLLV 368 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,708,354 Number of extensions: 724949 Number of successful extensions: 2167 Number of sequences better than 10.0: 32 Number of HSP's gapped: 2152 Number of HSP's successfully gapped: 33 Length of query: 385 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 283 Effective length of database: 11,315,673 Effective search space: 3202335459 Effective search space used: 3202335459 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
