ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf7p01 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g01840:12001.t00080:unspliced-genomic helix-loop-helix DNA-binding domain containing protein, expressed| Length = 5205 Score = 71.6 bits (150), Expect(4) = 1e-27 Identities = 28/49 (57%), Positives = 38/49 (77%) Frame = +3 / +1 Query: 537 SMEVRLICCMKRPIKLHEVITIHEEEGAEIINANHSVAGQKMFYTIHSR 683 S++V LIC RP+K H+VIT+ EEEGA+II+AN S+A +YTI+SR Sbjct: 1447 SLDVVLICSAARPVKFHDVITVLEEEGADIISANFSLAAHNFYYTIYSR 1593 Score = 47.8 bits (98), Expect(4) = 1e-27 Identities = 20/26 (76%), Positives = 22/26 (84%) Frame = +3 / +1 Query: 300 TQLGSLDVGASYIKKLKERVDELQRR 377 TQLGSLD A+YIKKLKERVDEL + Sbjct: 1183 TQLGSLDEAAAYIKKLKERVDELHHK 1260 Score = 38.2 bits (77), Expect(4) = 1e-27 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +3 / +1 Query: 228 MKALCEKLASLIPREHC 278 MK LC KLASLIP+EHC Sbjct: 334 MKGLCVKLASLIPKEHC 384 Score = 35.9 bits (72), Expect(4) = 1e-27 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = +3 / +3 Query: 663 FYTIHSRASSSRIGIDVPRVSERLRALL 746 F+ +A SSRIGI+ R+SERLRAL+ Sbjct: 1746 FFLNCMQAFSSRIGIEASRISERLRALV 1829 Score = 51.5 bits (106), Expect(4) = 1e-18 Identities = 26/48 (54%), Positives = 30/48 (62%) Frame = -3 / -2 Query: 655 WPATE*LALMISAPSSSWMVITSWSLIGLFMQHINLTSMLESSCCRTC 512 W A E LA M+SAPSSS V+TSW+L GL I+ TS L S TC Sbjct: 1565 WAAREKLAEMMSAPSSSRTVMTSWNLTGLAALQISTTSKLISDPSCTC 1422 Score = 45.1 bits (92), Expect(4) = 1e-18 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = -3 / -2 Query: 382 VILRCSSSTLSFSFLIYDAPTSRLPSWVI 296 ++L CSSSTLS SFL+ A +SRLPSWV+ Sbjct: 1265 LLLWCSSSTLSLSFLM*AAASSRLPSWVL 1179 Score = 33.1 bits (66), Expect(4) = 1e-18 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 / -3 Query: 745 SNARSRSETLGTSMPILELEA 683 +NARS SE L SMPILEL+A Sbjct: 1828 TNARSLSEILEASMPILELKA 1766 Score = 32.7 bits (65), Expect(4) = 1e-18 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = -3 / -2 Query: 280 QQCSLGMRDASFSQSAFM 227 +QCSLGMR+AS +Q FM Sbjct: 386 EQCSLGMREASLTQRPFM 333 Score = 39.1 bits (79), Expect(3) = 3e-07 Identities = 20/49 (40%), Positives = 25/49 (51%) Frame = +2 / +3 Query: 542 GGEIDMLHEEADQAP*GDHHP*GRRC*DHQRQSLCCWPKNVLHYTLSGL 688 G D+ EA Q P H P GRR H RQ L P+ +LH+ L G+ Sbjct: 1452 GRGADLQRSEAGQVPRRHHRPRGRRRRHHLRQLLPRRPQFLLHHLLQGM 1598 Score = 32.2 bits (64), Expect(3) = 3e-07 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +2 / +3 Query: 299 DPARQPGCGGIVYQEAEGEG 358 DPA QPG G ++QEA+G+G Sbjct: 1182 DPAGQPGRSGGLHQEAQGKG 1241 Score = 30.4 bits (60), Expect(3) = 3e-07 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +2 / +2 Query: 680 SGL*LENWHRCSKGF*TTASIAPT 751 +GL*L+NWHR + F* T I T Sbjct: 1763 AGL*LKNWHRGFEDF*ETTGIGMT 1834 Score = 52.8 bits (109), Expect(2) = 4e-07 Identities = 25/60 (41%), Positives = 32/60 (53%) Frame = -2 / -1 Query: 716 WNIYANSRARGPRVYSVEHFLASNRVIGVDDLSTFFLMDGDHLMELDRPLHAAYQSHLHA 537 W IY + P V V + +G DD+ FFL DGD ++ELDRP AA Q H+ A Sbjct: 1626 WRIYRWWWSTYPGVDGVVEIVGGEGEVGGDDVGAFFLEDGDDVVELDRPRCAADQHHVQA 1447 Score = 27.6 bits (54), Expect(2) = 4e-07 Identities = 15/28 (53%), Positives = 15/28 (53%) Frame = -1 / -3 Query: 381 SSYVVAHRPSPSAS*YTMPPHPGCLAGS 298 SS A P P AS* P PGC AGS Sbjct: 1264 SSCGAARPPFP*AS*CRPPLRPGCPAGS 1181
>LOC_Os01g01870:12001.t00083:unspliced-genomic helix-loop-helix DNA-binding domain containing protein, expressed| Length = 2826 Score = 92.3 bits (195), Expect(3) = 8e-25 Identities = 38/63 (60%), Positives = 49/63 (77%) Frame = +3 / +2 Query: 567 KRPIKLHEVITIHEEEGAEIINANHSVAGQKMFYTIHSRASSSRIGIDVPRVSERLRALL 746 +R ++LHEVI + EEEGAE++NA+ SV G K+FYT+HS+A SRIG+D RVS RLR LL Sbjct: 2192 ERAVRLHEVIGVLEEEGAEVVNASFSVVGDKIFYTLHSQALCSRIGLDASRVSHRLRNLL 2371 Query: 747 QLY 755 Y Sbjct: 2372 LQY 2380 Score = 43.2 bits (88), Expect(3) = 8e-25 Identities = 18/38 (47%), Positives = 26/38 (68%) Frame = +3 / +2 Query: 291 DTMTQLGSLDVGASYIKKLKERVDELQRRMTSAQTLDT 404 + +TQL L+ A+YIK+LK R+DEL++R A L T Sbjct: 1973 EAVTQLDHLEQAAAYIKQLKGRIDELKKRKQQAAALTT 2086 Score = 25.4 bits (49), Expect(3) = 8e-25 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +3 / +1 Query: 228 MKALCEKLASLIP 266 MK LC KL+SLIP Sbjct: 367 MKGLCLKLSSLIP 405 Score = 49.2 bits (101), Expect = 6e-05 Identities = 31/61 (50%), Positives = 33/61 (54%) Frame = -3 / -1 Query: 736 RSRSETLGTSMPILELEARECIV*NIFWPATE*LALMISAPSSSWMVITSWSLIGLFMQH 557 RS ETL S PILE A E V* I P TE LA SAPSSS ITS S L + Sbjct: 2361 RSLWETLEASRPILEQSAWEWRV*KILSPTTEKLAFTTSAPSSSSTPITSCSRTALSLSS 2182 Query: 556 I 554 + Sbjct: 2181 L 2179 Score = 43.2 bits (88), Expect = 0.003 Identities = 22/60 (36%), Positives = 31/60 (51%) Frame = -2 / -3 Query: 746 EQCSQSFRNPWNIYANSRARGPRVYSVEHFLASNRVIGVDDLSTFFLMDGDHLMELDRPL 567 E+ +Q +P + A+ A V SVE +A + GV L FFL DHL++ RPL Sbjct: 2371 EEVAQPVGDPGGVEADPGAERLGVESVEDLVADDGEAGVHHLRAFFLQHADHLVQPHRPL 2192 Score = 29.9 bits (59), Expect(2) = 8.2 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +2 / +1 Query: 299 DPARQPGCGGIVYQEAEGEGR 361 D A PG GG V+Q A+GE R Sbjct: 1981 DAAGSPGAGGGVHQAAQGEDR 2043 Score = 24.0 bits (46), Expect(2) = 8.2 Identities = 19/62 (30%), Positives = 27/62 (43%) Frame = +2 / +1 Query: 569 EADQAP*GDHHP*GRRC*DHQRQSLCCWPKNVLHYTLSGL*LENWHRCSKGF*TTASIAP 748 E A GD GRR +RQ L +++LH L G L++ R +G A P Sbjct: 2194 EGGAAARGDRRAGGRRRGGGERQLLRRRRQDLLHSPLPGALLQDRPRRLQGLPQAAQPPP 2373 Query: 749 TL 754 + Sbjct: 2374 PI 2379
>LOC_Os05g16370:12005.t01407:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 3917 Score = 36.8 bits (74), Expect(2) = 3e-05 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +3 / +1 Query: 870 TNKVANHECESWVEQDQVMWSSLLASISPELLE*V*DVST 989 T KV+N E+W+ DQ + LL+SIS E+L V +V T Sbjct: 202 TKKVSNPAYEAWIAADQQVLGFLLSSISKEILIQVANVDT 321 Score = 31.3 bits (62), Expect(2) = 3e-05 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 / +1 Query: 1069 SVSDYFNKVKELVDTMAMLVSPLAEKK 1149 SVSDY +K+K L D MA PL +++ Sbjct: 427 SVSDYISKMKTLADEMASAGKPLDDEE 507
>LOC_Os02g13670:12002.t01163:unspliced-genomic helix-loop-helix DNA-binding domain containing protein| Length = 949 Score = 38.6 bits (78), Expect(2) = 0.002 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 / +3 Query: 585 HEVITIHEEEGAEIINANHSVAGQKMFYTIHSRAS 689 H + E+ G ++ NA+ SVAG K YTIH+ S Sbjct: 675 HRAVRAVEDAGGQVQNAHFSVAGAKAVYTIHAMVS 779 Score = 26.3 bits (51), Expect(2) = 0.002 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +3 / +3 Query: 300 TQLGSLDVGASYIKKLKERVDELQRR 377 T+ L V A YI++ +ERVD L+ + Sbjct: 438 TRPDRLGVAAEYIRQTQERVDMLREK 515
>LOC_Os11g46020:12011.t04127:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2553 Score = 32.2 bits (64), Expect(2) = 0.007 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +3 / +1 Query: 876 KVANHECESWVEQDQVMWSSLLASISPELLE*V*DVSTMVE 998 KVAN E + W DQ + + +S+S E+L *+ D + ++ Sbjct: 202 KVANPEYQKWFAADQQLLGYIFSSLSREILG*IADCRSALQ 324 Score = 27.6 bits (54), Expect(2) = 0.007 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 / +1 Query: 1066 LSVSDYFNKVKELVDTMAMLVSPLAEK 1146 +SVS+YF K+K L D +A L E+ Sbjct: 418 MSVSEYFGKMKALADEVAATGKRLDEE 498
>LOC_Os05g39920:12005.t03532:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4350 Score = 40.5 bits (82), Expect = 0.023 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = +3 / +1 Query: 876 KVANHECESWVEQDQVMWSSLLASISPELLE*V*DVSTMVE 998 KV+N E+WV +DQ + S +LAS+S E+L V ++ T E Sbjct: 202 KVSNPAYETWVAEDQQVLSYMLASVSKEILTQVVNIETTAE 324
>LOC_Os02g40250:12002.t03661:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8551 Score = 40.5 bits (82), Expect = 0.023 Identities = 21/66 (31%), Positives = 32/66 (48%) Frame = +3 / +1 Query: 768 QAPSCMHNNQVLRYNDGANATPPKELVGNNDIGGTNKVANHECESWVEQDQVMWSSLLAS 947 Q + + ++ Y G A P ELV + G T AN ESW+ DQ + L +S Sbjct: 97 QVLATLRGARLEHYITGEAAPPVAELVTTDKDGKTKTTANPAYESWLATDQQVLGYLFSS 276 Query: 948 ISPELL 965 +S E++ Sbjct: 277 LSKEVM 294 Score = 35.4 bits (71), Expect = 0.76 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = -3 / -3 Query: 952 DIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVALAP 815 D + +R WS ++QDS++ FA + V P + TSS G A +P Sbjct: 281 DKEENRYPRTCWSVASQDSYAGFAVVFVLPSLSVVTSSATGGAASP 144
>LOC_Os08g12230:12008.t01103:unspliced-genomic expressed protein| Length = 2297 Score = 32.2 bits (64), Expect(2) = 0.26 Identities = 13/30 (43%), Positives = 22/30 (73%) Frame = -3 / -3 Query: 370 CSSSTLSFSFLIYDAPTSRLPSWVIVSVVE 281 CSSST SF ++IY +P+ L ++VS+++ Sbjct: 93 CSSSTCSFLYIIYLSPSLSLSLSLLVSLLQ 4 Score = 26.7 bits (52), Expect(2) = 0.26 Identities = 7/12 (58%), Positives = 7/12 (58%) Frame = -1 / -1 Query: 846 RAPWEESRWPHH 811 R PW RW HH Sbjct: 218 RLPWRRRRWQHH 183
>LOC_Os10g13690:12010.t01096:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7044 Score = 35.9 bits (72), Expect = 0.55 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +3 / +1 Query: 831 PPKELVGNNDIGGTNKVANHECESWVEQDQVMWSSLLASISPELLE*V*DVSTMVE 998 PP L+ + K N E WV DQ + S LL+S++ E+L V + T E Sbjct: 142 PPARLIDVKEGEKVVKATNPEYTKWVVADQQVLSYLLSSLAREILTQVVSIETAAE 309
>LOC_Os10g04640:12010.t00348:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4343 Score = 35.9 bits (72), Expect = 0.55 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +3 / +1 Query: 843 LVGNNDIGGTNKVANHECESWVEQDQVMWSSLLASISPELL 965 ++ +D T KVAN WV Q+Q + S LL+S+S E+L Sbjct: 172 VITKDDGKTTEKVANPALPQWVAQEQQVLSYLLSSLSHEVL 294
>LOC_Os04g45720:12004.t04104:unspliced-genomic aldehyde dehydrogenase 3B1, putative, expressed| Length = 4939 Score = 27.6 bits (54), Expect(2) = 0.59 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -3 / +1 Query: 1102 VPLLC*SSHLPIDILP 1055 VPLLC H P D+LP Sbjct: 2440 VPLLCSPQHKPSDVLP 2487 Score = 25.4 bits (49), Expect(2) = 0.59 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = -1 / +2 Query: 1155 FFFFFGKRRY*H 1120 FFFFF K Y*H Sbjct: 2402 FFFFFAKTAY*H 2437
>LOC_Os12g24710:12012.t02195:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4729 Score = 35.4 bits (71), Expect = 0.76 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +3 / +1 Query: 831 PPKELVGNNDIGGTNKVANHECESWVEQDQVMWSSLLASISPELLE*V*DVSTMVE 998 PP L+ + K N E WV DQ + S LL+S++ E+L V + T E Sbjct: 142 PPARLIDVKEGEKVVKATNLEYTKWVVADQQVLSYLLSSLTREILTQVVSIETAAE 309
>LOC_Os06g05240:12006.t00413:unspliced-genomic carboxypeptidase D precursor, putative, expressed| Length = 7233 Score = 35.0 bits (70), Expect = 1.0 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = +1 / +2 Query: 964 SSRCEMCQPWLSTCLHLWCMFSSHHVIGKSEEE 1062 ++ C MC+ S+C++L+C SSH + E++ Sbjct: 6950 TTSCFMCRELASSCIYLFCSLSSHCMFSSREKQ 7048
>LOC_Os08g17990:12008.t01669:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6087 Score = 34.5 bits (69), Expect = 1.4 Identities = 15/32 (46%), Positives = 22/32 (68%) Frame = +3 / +1 Query: 870 TNKVANHECESWVEQDQVMWSSLLASISPELL 965 T KVAN +WV Q+Q + S LL+S+S ++L Sbjct: 208 TEKVANPAYATWVAQEQQVLSYLLSSLSRDIL 303
>LOC_Os01g11140:12001.t00987:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4047 Score = 34.5 bits (69), Expect = 1.4 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +3 / +1 Query: 843 LVGNNDIGGTNKVANHECESWVEQDQVMWSSLLASISPELL 965 ++ +D T KVAN WV Q+Q + S LL+S+S ++L Sbjct: 172 VITKDDGKTTEKVANPALAQWVAQEQQVLSYLLSSLSRDVL 294
>LOC_Os12g16650:12012.t01518:unspliced-genomic cyclopropane fatty acid synthase, putative, expressed| Length = 9184 Score = 34.5 bits (69), Expect = 1.4 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +1 / +2 Query: 961 CSSRCEMCQPWLSTCLHLWCM 1023 C S C +PW S CLH W + Sbjct: 5942 CFSGCNRSRPWFSRCLHKWLL 6004
>LOC_Os04g52390:12004.t04714:unspliced-genomic potassium transporter 11, putative, expressed| Length = 5143 Score = 34.5 bits (69), Expect = 1.4 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +1 / -1 Query: 466 GRWKKRKLGRHRHPYCRCG 522 GRW R GRHRHPY G Sbjct: 4750 GRWCSRGCGRHRHPYTGSG 4694
>LOC_Os02g50960:12002.t04680:unspliced-genomic auxin efflux carrier component 1, putative, expressed| Length = 3160 Score = 34.5 bits (69), Expect = 1.4 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +1 / -1 Query: 961 CSSRCEMCQPWLSTCLHLWCMFSSHH 1038 C +C P L TC WC F +HH Sbjct: 2974 CDLNWILCPPKLCTCTCFWCSFVTHH 2897
>LOC_Os01g18660:12001.t01658:unspliced-genomic isopenicillin N epimerase, putative, expressed| Length = 4367 Score = 26.7 bits (52), Expect(2) = 1.9 Identities = 13/51 (25%), Positives = 22/51 (43%) Frame = -3 / +3 Query: 1063 ILPQICQLHDERRTCTTNVDKCSTMVDTSHTYSSNSGDIDASRELHITWSC 911 IL + QL ++ TC + + S + S N I+A + + W C Sbjct: 3717 ILLSLLQLQ*QKTTCLSTLFLSSCKISNSRELGKNFACINAVYFVSLWWHC 3869 Score = 24.4 bits (47), Expect(2) = 1.9 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -1 / +2 Query: 1155 FFFFFGKRRY*H 1120 FFFFFGK + H Sbjct: 3683 FFFFFGKNSFIH 3718
>LOC_Os12g33390:12012.t03030:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 495 Score = 34.1 bits (68), Expect = 2.0 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +3 / +1 Query: 876 KVANHECESWVEQDQVMWSSLLASISPELLE*V*DVSTMVE 998 KV N E+WV +DQ + +LA +S E+L V + T E Sbjct: 199 KVTNPAYETWVAEDQQVLGYILALVSKEILTQVVNTETAAE 321
>LOC_Os04g56740:12004.t05142:unspliced-genomic IQ calmodulin-binding motif family protein, expressed| Length = 5928 Score = 34.1 bits (68), Expect = 2.0 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -3 / -3 Query: 400 SKVCAEVILRCSSSTLSFSFLIYDAPTSRLPSWVIVSV 287 +K+ + V+ CSS++LSF F I + T + SW+ SV Sbjct: 2326 TKILSSVLSVCSSTSLSFGFTIGVSVTLSVGSWIGTSV 2213
>LOC_Os06g10520:12006.t00930:unspliced-genomic pantothenate kinase family protein, expressed| Length = 6347 Score = 34.1 bits (68), Expect = 2.0 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = -1 / +2 Query: 912 AQPKTHTRGLPPCWFHLYHCCRRAPWEESRWPHHCT*GLDCCACTTVPDFH 760 A+ K H + W H H W + W H +*G C A T+ FH Sbjct: 5351 AKFKQHFCAMRGSWEH*VHFGAMRTWVLTAWQHMKS*GRSCLALLTLGSFH 5503
>LOC_Os05g48810:12005.t04315:unspliced-genomic dnaJ homolog subfamily B member 5, putative, expressed| Length = 2315 Score = 34.1 bits (68), Expect = 2.0 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = -1 / -1 Query: 894 TRGLPPCWFHLYHCCRRAPWEESRWPHHC 808 +R LPPC + CRR W R P C Sbjct: 701 SRALPPCRRPCHRPCRRTGWTSRRTPRRC 615
>LOC_Os04g52310:12004.t04706:unspliced-genomic zinc transporter 1 precursor, putative, expressed| Length = 2340 Score = 34.1 bits (68), Expect = 2.0 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -1 / -3 Query: 837 WEESRWPHHCT*G 799 W +SRWPH CT*G Sbjct: 1261 WPDSRWPHRCT*G 1223
>LOC_Os02g32430:12002.t02886:unspliced-genomic WD40 repeat protein, putative, expressed| Length = 2754 Score = 33.6 bits (67), Expect = 2.7 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 / -3 Query: 885 LPPCWFHLYHCCRRAPW 835 L C FH +HCC + PW Sbjct: 1093 LQHCHFHCHHCCSQCPW 1043
>LOC_Os02g19820:12002.t01774:unspliced-genomic expressed protein| Length = 4232 Score = 33.6 bits (67), Expect = 2.7 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -1 / +1 Query: 879 PCWFHLYHCCRRAPWEESRW 820 PC+F + CR PW SRW Sbjct: 4105 PCFFLPFCTCRNVPWRPSRW 4164
>LOC_Os01g02139:12001.t006895:unspliced-genomic expressed protein| Length = 527 Score = 33.6 bits (67), Expect = 2.7 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -1 / +2 Query: 327 PPHPGCLAGSLYQWWSSSV 271 PP P CL G L WW +S+ Sbjct: 86 PPSPSCLCGRLPAWWPTSI 142
>LOC_Os08g37390:12008.t03476:unspliced-genomic cyclin delta-2, putative, expressed| Length = 3065 Score = 33.1 bits (66), Expect(2) = 2.7 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 / +2 Query: 75 YISYSMNACALNSMEPVKAKPARGGKRSRESGGTAVVL 188 Y+S S++ L+S+ + +P RGG+ R G VVL Sbjct: 32 YLSLSLSLSVLDSLAQEEDQPERGGEGRRRDGSELVVL 145 Score = 22.6 bits (43), Expect(2) = 2.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 / +2 Query: 1008 TFVVHVLLSSCNWQI*GRMSIGK* 1079 TFV H S C +I GR+S G * Sbjct: 2069 TFVEHSTGSECVKRIYGRVSSGS* 2140
>LOC_Os03g01090:12003.t00009:unspliced-genomic expressed protein| Length = 2778 Score = 26.3 bits (51), Expect(2) = 3.6 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -1 / +1 Query: 381 SSYVVAHRPSPSAS*YTMPPHPGC 310 +S+ A PSP PPHPGC Sbjct: 100 ASFRRALLPSPIRRSTRRPPHPGC 171 Score = 24.0 bits (46), Expect(2) = 3.6 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -1 / +2 Query: 531 RRVAAPAIRVPMPP 490 RR AAPA R MPP Sbjct: 65 RRRAAPARRTAMPP 106
>LOC_Os12g32590:12012.t02954:unspliced-genomic disease resistance protein RPM1, putative, expressed| Length = 4651 Score = 33.1 bits (66), Expect = 3.7 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -3 / -3 Query: 628 MISAPSSSWMVITSWSLIGLFMQHINLTSMLESSCCRTC 512 M S ++SW+ WSL + N TS++E+ C+ C Sbjct: 2246 MTSFAAASWICCFGWSLARPSVPFFNSTSLVENKRCKGC 2130
>LOC_Os03g44240:12003.t03812:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4361 Score = 33.1 bits (66), Expect = 3.7 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1066 LSVSDYFNKVKELVDTMAMLVSPLAEKK 1149 LSVSDY +K+K L D MA PL +++ Sbjct: 415 LSVSDYISKMKVLADEMAFAGKPLDDEE 498
>LOC_Os01g01295:12001.t06777:unspliced-genomic expressed protein| Length = 2619 Score = 33.1 bits (66), Expect = 3.7 Identities = 20/69 (28%), Positives = 28/69 (40%) Frame = -1 / +3 Query: 975 TPTRATLVILTQAGNSTSLGLAQPKTHTRGLPPCWFHLYHCCRRAPWEESRWPHHCT*GL 796 +PTRAT + A + TS +P T T + PC R A S C+ Sbjct: 459 SPTRATSGTASSAASPTSTPPPKPPTETPSMRPCATSTRRISRPAGASTSCRSSSCSRPR 638 Query: 795 DCCACTTVP 769 C +T+P Sbjct: 639 PCATTSTLP 665
>LOC_Os08g41640:12008.t03893:unspliced-genomic ubiquitin carboxyl-terminal hydrolase family protein, expressed| Length = 5834 Score = 28.1 bits (55), Expect(2) = 4.7 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +2 / -2 Query: 305 ARQPGCGGIVYQEAEGEG 358 ARQP CGG V AE G Sbjct: 232 ARQPACGGEVRSSAEAAG 179 Score = 27.6 bits (54), Expect(2) = 4.7 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +2 / -3 Query: 254 IPHPKGTLLLHH*YN 298 IPHP+ LL+HH +N Sbjct: 1431 IPHPRPLLLVHHTWN 1387
>LOC_Os07g27480:12007.t02442:unspliced-genomic ubiquinone biosynthesis protein ubiB, putative, expressed| Length = 9548 Score = 32.7 bits (65), Expect = 5.1 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 / +2 Query: 841 SSSATMI*VEPTRWQTTSVSLGLS 912 SS TM+ V P WQ TS+ LGLS Sbjct: 6266 SSLCTMLTVTPWAWQMTSIHLGLS 6337
>LOC_Os06g08830:12006.t00762:unspliced-genomic flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative,| expressed Length = 1674 Score = 32.7 bits (65), Expect = 5.1 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +1 / +1 Query: 769 RHRRACTTIKSSGTMMGPTRLLPRSSSATMI*VEPTRWQTTSVS 900 R RR+C+++ SS +R P S+++ P+ W++ S S Sbjct: 436 RRRRSCSSLTSSSGSRSESRTTPASAASRSTACRPSPWRSASPS 567
>LOC_Os02g24660:12002.t02163:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1129 Score = 32.7 bits (65), Expect = 5.1 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +1 / +3 Query: 472 WKKRKLGRHRHPYCRCGNTTIQ 537 W+K K+GR R+P+CR IQ Sbjct: 369 WEKGKVGRERNPFCRPRGRAIQ 434
>LOC_Os11g09940:12011.t00886:unspliced-genomic expressed protein| Length = 3005 Score = 30.9 bits (61), Expect(2) = 6.5 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = -2 / -1 Query: 479 FFQRPYSAFRGSGGSGRW 426 FF P S RG GGSGRW Sbjct: 677 FFILPPSGRRGDGGSGRW 624 Score = 23.5 bits (45), Expect(2) = 6.5 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = -3 / -1 Query: 637 LALMISAPSSSWMVITSWSLIGLFMQHINLTSMLESSCCR 518 L L I S SW++ S S L + + M S CCR Sbjct: 1769 LFLPIIVVSCSWIIALSCSQSALEITQPEPSLMDLSKCCR 1650
>LOC_Os11g36270:12011.t03174:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2101 Score = 32.2 bits (64), Expect = 7.0 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1066 LSVSDYFNKVKELVDTMAMLVSPLAEKK 1149 LSVSDY NK+K L D M P+ +++ Sbjct: 112 LSVSDYINKMKMLADEMTAAGKPMDDEE 195
>LOC_Os05g29790:12005.t02579:unspliced-genomic papillar cell-specific pectin methylesterase-like protein,| putative, expressed Length = 3340 Score = 27.2 bits (53), Expect(2) = 7.1 Identities = 9/17 (52%), Positives = 9/17 (52%) Frame = -1 / +2 Query: 855 CCRRAPWEESRWPHHCT 805 CC R W SRWP T Sbjct: 101 CCSR*SWWRSRWPPPAT 151 Score = 27.2 bits (53), Expect(2) = 7.1 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +2 Query: 531 RRVAAPAIRVPMPPELSLLPATLQR 457 RR P +R+P+PP S AT R Sbjct: 2438 RRCRLPVLRLPLPPPASPASATPSR 2512
>LOC_Os06g28290:12006.t02533:unspliced-genomic conserved hypothetical protein| Length = 684 Score = 26.3 bits (51), Expect(2) = 7.6 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -1 / -1 Query: 501 PMPPELSLLPATLQ 460 P PP LS +PATLQ Sbjct: 501 PPPPSLSSVPATLQ 460 Score = 25.8 bits (50), Expect(2) = 7.6 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -1 / -1 Query: 882 PPCWFHLYHCCRRAPWEESRWPHH 811 P W L R +P+ S WPHH Sbjct: 579 PIKWNPLAPFYRFSPFSSSPWPHH 508
>LOC_Os10g34020:12010.t02704:unspliced-genomic glutathione S-transferase GSTU6, putative, expressed| Length = 3804 Score = 24.4 bits (47), Expect(2) = 8.5 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -2 / +3 Query: 452 RGSGGSGRWDASVSSES 402 R S GSGRW S +S S Sbjct: 3381 RTSDGSGRWRGSPASSS 3431 Score = 24.4 bits (47), Expect(2) = 8.5 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = -1 / +1 Query: 324 PHPGCLAGSL 295 P PGCL GSL Sbjct: 3448 PQPGCLGGSL 3477
>LOC_Os05g06780:12005.t00568:unspliced-genomic lipid binding protein, putative, expressed| Length = 1403 Score = 25.8 bits (50), Expect(2) = 9.2 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -1 / -1 Query: 396 RSAQRSSYVVAHRPSPSAS 340 RSA RS+ + H P+PSA+ Sbjct: 221 RSATRSADALPHSPAPSAA 165 Score = 23.1 bits (44), Expect(2) = 9.2 Identities = 11/25 (44%), Positives = 11/25 (44%) Frame = -2 / -2 Query: 449 GSGGSGRWDASVSSESIQGLRRGHP 375 GS GS RW A SS G P Sbjct: 319 GSWGSARWCAPPSSSCSTAPTAGRP 245
>LOC_Os11g07650:12011.t00656:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4908 Score = 31.8 bits (63), Expect = 9.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +3 / +1 Query: 864 GGTNKVANHECESWVEQDQVMWSSLLASISPELLE*V*DVSTMVE 998 G TNK AN + W DQ + LL+S++ ++L V T E Sbjct: 190 GATNKTANPVYDDWEATDQQVLGFLLSSLTRDVLMQVSTCETAAE 324
>LOC_Os07g23720:12007.t02069:unspliced-genomic protein binding protein, putative, expressed| Length = 1604 Score = 31.8 bits (63), Expect = 9.6 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = -3 / -3 Query: 931 LHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVALAPSLYLRT 797 LH + S + W +PP LLPTS L L P L L T Sbjct: 1326 LHTLVATSACNHKGWSIPHPIPPHQLLPTSFLSQFHLCPHLNLST 1192
>LOC_Os07g09990:12007.t00873:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4867 Score = 31.8 bits (63), Expect = 9.6 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +3 / -3 Query: 48 LIIFLACEVYISYSMNACALNSMEPVKAKPARGGKRSRESGGTA 179 L++F++ + +S + +L S++PV+ GGK R G TA Sbjct: 824 LLLFISLSLSLSSLSPSLSLFSLQPVERWGRSGGKAGRSRGATA 693
>LOC_Os04g38026:12004.t03373:unspliced-genomic sugar transport protein 5, putative, expressed| Length = 6078 Score = 31.8 bits (63), Expect = 9.6 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = -3 / +3 Query: 916 SCSTQDSHSWFATLLVPPISLLPTSSLGGVALA 818 SC + + SW A PP S LP SS GG LA Sbjct: 3621 SC*SGAACSWSARS*TPPRSTLPCSSSGGCCLA 3719
>LOC_Os03g24300:12003.t02125:unspliced-genomic AAA ATPase containing von Willebrand factor type A, putative,| expressed Length = 1112 Score = 31.8 bits (63), Expect = 9.6 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -3 / -3 Query: 988 VDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPIS 857 +DTS ++ S +S +WSCS S SW+++ PP S Sbjct: 717 LDTSCSHRQQSRYALSSSSWCSSWSCSWSSSSSWWSSSSPPPPS 586
>LOC_Os07g22440:12007.t01948:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1695 Score = 31.8 bits (63), Expect = 9.7 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -1 / +3 Query: 987 LTHLTPTRATLVILTQAGNSTSLGLAQPKTHTRGLPPCW 871 LT PTR ++ LTQ N G R LP CW Sbjct: 798 LTTQRPTRTHILSLTQGDNGGESGSIDSGGFLRVLPTCW 914
>LOC_Os02g42710:12002.t03856:unspliced-genomic elicitor-responsive protein 3, putative, expressed| Length = 3106 Score = 31.8 bits (63), Expect = 9.7 Identities = 14/25 (56%), Positives = 14/25 (56%) Frame = -1 / -3 Query: 531 RRVAAPAIRVPMPPELSLLPATLQR 457 RR A PA R P PP LPA L R Sbjct: 128 RRAAPPASRAPSPPPPFFLPAALLR 54
>LOC_Os02g02460:12002.t00145:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 3286 Score = 31.8 bits (63), Expect = 9.7 Identities = 9/27 (33%), Positives = 16/27 (59%) Frame = +1 / +3 Query: 973 CEMCQPWLSTCLHLWCMFSSHHVIGKS 1053 C +C + TC+ LWC+ S +++ S Sbjct: 2025 CFLCVDRIKTCMFLWCLILS*YILSNS 2105
>LOC_Os02g01840:12002.t00084:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4118 Score = 31.8 bits (63), Expect = 9.7 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1066 LSVSDYFNKVKELVDTMAMLVSPLAEKK 1149 LSVSDY NK+K L D M P+ +++ Sbjct: 415 LSVSDYINKMKILADEMTSAGKPMDDEE 498 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 454,568,780 Number of extensions: 7737426 Number of successful extensions: 33277 Number of sequences better than 10.0: 51 Length of query: 385 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 335 Effective length of database: 52,799,986 Effective search space: 17687995310 Effective search space used: 17687995310 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
