| Clone Name | FLbaf10m16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106382.1| Zea mays PCO146928 mRNA sequence Length = 1474 Score = 710 bits (358), Expect = 0.0 Identities = 676/782 (86%) Strand = Plus / Plus Query: 378 gtagcttcagctcctcatctgatggtaatggatacatggctagaaacttcaatgaaaatg 437 ||||||||||||| || |||||||| ||||||||||||||| ||||||| | || | || Sbjct: 426 gtagcttcagctcgtcttctgatggcaatggatacatggctggaaactttagcgacagtg 485 Query: 438 atgaagattatgttaattccactgtgcttgaagctgttgaggtcagaagtggatcagaag 497 ||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 486 atgaagattatgttaattctactgtgctagaagcagttgaggtgagaagtggatcggaag 545 Query: 498 gatatatagtaaagatgcgagatgggaaaaacctgctgtgtgtgcataataattctcaag 557 ||||| | ||||||||||||||||||||||| ||| ||||| ||||| |||||||||| Sbjct: 546 gatatgtgataaagatgcgagatgggaaaaacttgcgttgtgtccataacaattctcaag 605 Query: 558 ggagagagattccagagagtgcaccacaacctgctatcgttttaagaatcgaagatggaa 617 ||||| | ||||||||||||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 606 ggagaaatattccagagagtgcaccccaacctgctattgttttgaggattgaagatggaa 665 Query: 618 gtggaactttacttccaatcattgttttggagatgccaagtgtacttctgatggctgcta 677 | | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 666 gcgaaactttacttccaatcattgttttggagatgccaagtgtacttctgatggcggcta 725 Query: 678 ttcgtcatgttcatattgcaagacctaccatatatcaagttgttaaggaactgattgata 737 ||||| |||| || |||||| |||| ||||||||||||||||| |||||| ||||||||| Sbjct: 726 ttcgtaatgtccacattgcacgaccaaccatatatcaagttgtcaaggaaatgattgata 785 Query: 738 agatgggctatgaggtaaaacttgttcgagtaaacaaaagaattcaagaagcatactgtg 797 | |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 786 aaatgggctatgaggtaaaacttgttcgggtaaacaaaagaattcaagaagcgtactgtg 845 Query: 798 ccgagctctatctaacaaagactggagatcaaacagagtgtataacatttgatcttcgac 857 | || || | ||||||||||| || ||| ||||| | || || || |||||||| | Sbjct: 846 ctgaactttgtctaacaaagattgatgattctacagacagcatcaccttcgatcttcggc 905 Query: 858 cttcggatgctatcaatattgctgttcgctgcaaggttcctatacaagtacataggagtc 917 |||| ||||| || || ||||||||||| |||||||||||| ||||||| ||||| |||| Sbjct: 906 cttcagatgccataaacattgctgttcgttgcaaggttcctgtacaagtccatagaagtc 965 Query: 918 ttgcatacagcgacggcataagatcagtcgagccagcaaaatttgtggcctcagctggcc 977 |||||||||| |||||||| ||| ||||||||||||||| | | | | ||||||||| Sbjct: 966 ttgcatacagtgacggcatcagaccagtcgagccagcaagaatggcagtagcagctggcc 1025 Query: 978 tatcagatggtttgttgtttactgaacttgacagacctgatggacagccctgcgttgagg 1037 |||||||||| ||||| ||||| || ||||||||||| ||||||||| | | ||||||| Sbjct: 1026 tatcagatgggttgttatttacagagcttgacagacccgatggacaggcatctgttgagg 1085 Query: 1038 ctcaagagtttagtttggtgcgaaacatgttcattgcagttgttgaagagagatacaaag 1097 ||||||||||| | |||||| |||||| ||||||||| || |||||||||||||| | Sbjct: 1086 ctcaagagtttggattggtgaagaacatgctcattgcagccgtagaagagagatacaagg 1145 Query: 1098 atgcagcaacatggaaggacaaactaatgaagctgaggtccaagcggaagaactgggcct 1157 |||| ||| |||||||||||||||| || ||| ||||| |||||| |||||||||||| Sbjct: 1146 atgctgcatcatggaaggacaaactgattcggctcaggtctaagcgggagaactgggcct 1205 Query: 1158 ga 1159 || Sbjct: 1206 ga 1207
>ref|NM_001068159.1| Oryza sativa (japonica cultivar-group) Os08g0357000 (Os08g0357000) mRNA, complete cds Length = 1524 Score = 692 bits (349), Expect = 0.0 Identities = 676/785 (86%) Strand = Plus / Plus Query: 378 gtagcttcagctcctcatctgatggtaatggatacatggctagaaacttcaatgaaaatg 437 ||||||||||||| || || |||||||||||||| |||||| ||||||| | ||| | || Sbjct: 438 gtagcttcagctcgtcgtccgatggtaatggatatatggctggaaactttagtgagagtg 497 Query: 438 atgaagattatgttaattccactgtgcttgaagctgttgaggtcagaagtggatcagaag 497 ||||||||||||||||||| |||||||| ||||| |||||||| |||||||| |||| | Sbjct: 498 atgaagattatgttaattctactgtgctagaagcagttgaggtgagaagtggggcagagg 557 Query: 498 gatatatagtaaagatgcgagatgggaaaaacctgctgtgtgtgcataataattctcaag 557 ||||| || | ||||||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 558 gatatgtaatcaagatgcgagatgggaaaaacttgagatgtgtgcacaataattctcaag 617 Query: 558 ggagagagattccagagagtgcaccacaacctgctatcgttttaagaatcgaagatggaa 617 ||||| | |||||||| || ||||||||||||||||| ||||| || || |||||||||| Sbjct: 618 ggagaaatattccagaaagcgcaccacaacctgctattgttttgaggattgaagatggaa 677 Query: 618 gtggaactttacttccaatcattgttttggagatgccaagtgtacttctgatggctgcta 677 ||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 678 gtgaaactttacttccaatcattgttttggaaatgccaagcgtacttctgatggctgcta 737 Query: 678 ttcgtcatgttcatattgcaagacctaccatatatcaagttgttaaggaactgattgata 737 |||| |||| || ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 738 ttcggaatgtccacattgcaagaccaaccatatatcaagttgtgaaggagatgattgata 797 Query: 738 agatgggctatgaggtaaaacttgttcgagtaaacaaaagaattcaagaagcatactgtg 797 ||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||| Sbjct: 798 agatgggttatgaggtaaaactggttcggataaataaaagaattcaagaagcatactgtg 857 Query: 798 ccgagctctatctaacaaagactggagatcaaacagagtgtataacatttgatcttcgac 857 | || || | ||| || ||| || || || ||||| |||| || |||||||| ||| Sbjct: 858 ctgaactgtttctgacgaaggtaggtgaccatacagaaagtatcacctttgatctaagac 917 Query: 858 cttcggatgctatcaatattgctgttcgctgcaaggttcctatacaagtacataggagtc 917 |||| ||||| || || |||||||||||||||||||||||||||||||| ||||| || | Sbjct: 918 cttcagatgccataaacattgctgttcgctgcaaggttcctatacaagtccatagaagcc 977 Query: 918 ttgcatacagcgacggcataagatcagtcgagccagcaaaatttgtggcctcagctggcc 977 |||||||||| || ||||||||||||||||||||||||| | | | | |||| ||| Sbjct: 978 ttgcatacagtgatggcataagatcagtcgagccagcaagaatggcgatagcagccggca 1037 Query: 978 tatcagatggtttgttgtttactgaacttgacagacctgatggacagccctgcgttgagg 1037 | || || || ||||||||||| |||||||||||||||||||| ||||| || || |||| Sbjct: 1038 tgtctgacgggttgttgtttacagaacttgacagacctgatgggcagccatgtgtcgagg 1097 Query: 1038 ctcaagagtttagtttggtgcgaaacatgttcattgcagttgttgaagagagatacaaag 1097 ||||||||||| | ||| | || |||||| ||||||||| |||||||||||||||||||| Sbjct: 1098 ctcaagagtttggattgatccggaacatgctcattgcagctgttgaagagagatacaaag 1157 Query: 1098 atgcagcaacatggaaggacaaactaatgaagctgaggtccaagcggaagaactgggcct 1157 |||| ||||| |||| ||||||||| ||| ||||||||| |||||||| |||||||||| Sbjct: 1158 atgctgcaacgtggagggacaaactgatgctgctgaggtctaagcggaaaaactgggcct 1217 Query: 1158 gaaag 1162 ||||| Sbjct: 1218 gaaag 1222
>dbj|AK105899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F07, full insert sequence Length = 1460 Score = 692 bits (349), Expect = 0.0 Identities = 676/785 (86%) Strand = Plus / Plus Query: 378 gtagcttcagctcctcatctgatggtaatggatacatggctagaaacttcaatgaaaatg 437 ||||||||||||| || || |||||||||||||| |||||| ||||||| | ||| | || Sbjct: 459 gtagcttcagctcgtcgtccgatggtaatggatatatggctggaaactttagtgagagtg 518 Query: 438 atgaagattatgttaattccactgtgcttgaagctgttgaggtcagaagtggatcagaag 497 ||||||||||||||||||| |||||||| ||||| |||||||| |||||||| |||| | Sbjct: 519 atgaagattatgttaattctactgtgctagaagcagttgaggtgagaagtggggcagagg 578 Query: 498 gatatatagtaaagatgcgagatgggaaaaacctgctgtgtgtgcataataattctcaag 557 ||||| || | ||||||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 579 gatatgtaatcaagatgcgagatgggaaaaacttgagatgtgtgcacaataattctcaag 638 Query: 558 ggagagagattccagagagtgcaccacaacctgctatcgttttaagaatcgaagatggaa 617 ||||| | |||||||| || ||||||||||||||||| ||||| || || |||||||||| Sbjct: 639 ggagaaatattccagaaagcgcaccacaacctgctattgttttgaggattgaagatggaa 698 Query: 618 gtggaactttacttccaatcattgttttggagatgccaagtgtacttctgatggctgcta 677 ||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 699 gtgaaactttacttccaatcattgttttggaaatgccaagcgtacttctgatggctgcta 758 Query: 678 ttcgtcatgttcatattgcaagacctaccatatatcaagttgttaaggaactgattgata 737 |||| |||| || ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 759 ttcggaatgtccacattgcaagaccaaccatatatcaagttgtgaaggagatgattgata 818 Query: 738 agatgggctatgaggtaaaacttgttcgagtaaacaaaagaattcaagaagcatactgtg 797 ||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||| Sbjct: 819 agatgggttatgaggtaaaactggttcggataaataaaagaattcaagaagcatactgtg 878 Query: 798 ccgagctctatctaacaaagactggagatcaaacagagtgtataacatttgatcttcgac 857 | || || | ||| || ||| || || || ||||| |||| || |||||||| ||| Sbjct: 879 ctgaactgtttctgacgaaggtaggtgaccatacagaaagtatcacctttgatctaagac 938 Query: 858 cttcggatgctatcaatattgctgttcgctgcaaggttcctatacaagtacataggagtc 917 |||| ||||| || || |||||||||||||||||||||||||||||||| ||||| || | Sbjct: 939 cttcagatgccataaacattgctgttcgctgcaaggttcctatacaagtccatagaagcc 998 Query: 918 ttgcatacagcgacggcataagatcagtcgagccagcaaaatttgtggcctcagctggcc 977 |||||||||| || ||||||||||||||||||||||||| | | | | |||| ||| Sbjct: 999 ttgcatacagtgatggcataagatcagtcgagccagcaagaatggcgatagcagccggca 1058 Query: 978 tatcagatggtttgttgtttactgaacttgacagacctgatggacagccctgcgttgagg 1037 | || || || ||||||||||| |||||||||||||||||||| ||||| || || |||| Sbjct: 1059 tgtctgacgggttgttgtttacagaacttgacagacctgatgggcagccatgtgtcgagg 1118 Query: 1038 ctcaagagtttagtttggtgcgaaacatgttcattgcagttgttgaagagagatacaaag 1097 ||||||||||| | ||| | || |||||| ||||||||| |||||||||||||||||||| Sbjct: 1119 ctcaagagtttggattgatccggaacatgctcattgcagctgttgaagagagatacaaag 1178 Query: 1098 atgcagcaacatggaaggacaaactaatgaagctgaggtccaagcggaagaactgggcct 1157 |||| ||||| |||| ||||||||| ||| ||||||||| |||||||| |||||||||| Sbjct: 1179 atgctgcaacgtggagggacaaactgatgctgctgaggtctaagcggaaaaactgggcct 1238 Query: 1158 gaaag 1162 ||||| Sbjct: 1239 gaaag 1243
>dbj|AK070322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052C20, full insert sequence Length = 1525 Score = 684 bits (345), Expect = 0.0 Identities = 675/785 (85%) Strand = Plus / Plus Query: 378 gtagcttcagctcctcatctgatggtaatggatacatggctagaaacttcaatgaaaatg 437 ||||||||||||| || || |||||||||||||| |||||| ||||||| | ||| | || Sbjct: 439 gtagcttcagctcgtcgtccgatggtaatggatatatggctggaaactttagtgagagtg 498 Query: 438 atgaagattatgttaattccactgtgcttgaagctgttgaggtcagaagtggatcagaag 497 ||||||||||||||||||| |||||||| ||||| |||||||| |||||||| |||| | Sbjct: 499 atgaagattatgttaattctactgtgctagaagcagttgaggtgagaagtggggcagagg 558 Query: 498 gatatatagtaaagatgcgagatgggaaaaacctgctgtgtgtgcataataattctcaag 557 ||||| || | ||||||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 559 gatatgtaatcaagatgcgagatgggaaaaacttgagatgtgtgcacaataattctcaag 618 Query: 558 ggagagagattccagagagtgcaccacaacctgctatcgttttaagaatcgaagatggaa 617 ||||| | |||||||| || ||||||||||||||||| ||||| || || |||||||||| Sbjct: 619 ggagaaatattccagaaagcgcaccacaacctgctattgttttgaggattgaagatggaa 678 Query: 618 gtggaactttacttccaatcattgttttggagatgccaagtgtacttctgatggctgcta 677 ||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 679 gtgaaactttacttccaatcattgttttggaaatgccaagcgtacttctgatggctgcta 738 Query: 678 ttcgtcatgttcatattgcaagacctaccatatatcaagttgttaaggaactgattgata 737 |||| |||| || ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 739 ttcggaatgtccacattgcaagaccaaccatatatcaagttgtgaaggagatgattgata 798 Query: 738 agatgggctatgaggtaaaacttgttcgagtaaacaaaagaattcaagaagcatactgtg 797 ||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||| Sbjct: 799 agatgggttatgaggtaaaactggttcggataaataaaagaattcaagaagcatactgtg 858 Query: 798 ccgagctctatctaacaaagactggagatcaaacagagtgtataacatttgatcttcgac 857 | || || | ||| || ||| || || || ||||| |||| || |||||||| ||| Sbjct: 859 ctgaactgtttctgacgaaggtaggtgaccatacagaaagtatcacctttgatctaagac 918 Query: 858 cttcggatgctatcaatattgctgttcgctgcaaggttcctatacaagtacataggagtc 917 |||| ||||| || || |||||||||||||||||||||||||||||||| ||||| || | Sbjct: 919 cttcagatgccataaacattgctgttcgctgcaaggttcctatacaagtccatagaagcc 978 Query: 918 ttgcatacagcgacggcataagatcagtcgagccagcaaaatttgtggcctcagctggcc 977 |||||||||| || ||||||||||||||||||||||||| | | | | |||| ||| Sbjct: 979 ttgcatacagtgatggcataagatcagtcgagccagcaagaatggcgatagcagccggca 1038 Query: 978 tatcagatggtttgttgtttactgaacttgacagacctgatggacagccctgcgttgagg 1037 | || || || ||||||||||| ||||||||||||||||||| ||||| || || |||| Sbjct: 1039 tgtctgacgggttgttgtttacaaaacttgacagacctgatgggcagccatgtgtcgagg 1098 Query: 1038 ctcaagagtttagtttggtgcgaaacatgttcattgcagttgttgaagagagatacaaag 1097 ||||||||||| | ||| | || |||||| ||||||||| |||||||||||||||||||| Sbjct: 1099 ctcaagagtttggattgatccggaacatgctcattgcagctgttgaagagagatacaaag 1158 Query: 1098 atgcagcaacatggaaggacaaactaatgaagctgaggtccaagcggaagaactgggcct 1157 |||| ||||| |||| ||||||||| ||| ||||||||| |||||||| |||||||||| Sbjct: 1159 atgctgcaacgtggagggacaaactgatgctgctgaggtctaagcggaaaaactgggcct 1218 Query: 1158 gaaag 1162 ||||| Sbjct: 1219 gaaag 1223
>dbj|AK112035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G04, full insert sequence Length = 1119 Score = 599 bits (302), Expect = e-167 Identities = 593/690 (85%) Strand = Plus / Plus Query: 473 gttgaggtcagaagtggatcagaaggatatatagtaaagatgcgagatgggaaaaacctg 532 |||||||| |||||||| |||| |||||| || | ||||||||||||||||||||| || Sbjct: 259 gttgaggtgagaagtggggcagagggatatgtaatcaagatgcgagatgggaaaaacttg 318 Query: 533 ctgtgtgtgcataataattctcaagggagagagattccagagagtgcaccacaacctgct 592 |||||||| |||||||||||||||||| | |||||||| || ||||||||||||||| Sbjct: 319 agatgtgtgcacaataattctcaagggagaaatattccagaaagcgcaccacaacctgct 378 Query: 593 atcgttttaagaatcgaagatggaagtggaactttacttccaatcattgttttggagatg 652 || ||||| || || ||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 379 attgttttgaggattgaagatggaagtgaaactttacttccaatcattgttttggaaatg 438 Query: 653 ccaagtgtacttctgatggctgctattcgtcatgttcatattgcaagacctaccatatat 712 ||||| ||||||||||||||||||||||| |||| || ||||||||||| ||||||||| Sbjct: 439 ccaagcgtacttctgatggctgctattcggaatgtccacattgcaagaccaaccatatat 498 Query: 713 caagttgttaaggaactgattgataagatgggctatgaggtaaaacttgttcgagtaaac 772 |||||||| ||||| |||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 499 caagttgtgaaggagatgattgataagatgggttatgaggtaaaactggttcggataaat 558 Query: 773 aaaagaattcaagaagcatactgtgccgagctctatctaacaaagactggagatcaaaca 832 |||||||||||||||||||||||||| || || | ||| || ||| || || || ||| Sbjct: 559 aaaagaattcaagaagcatactgtgctgaactgtttctgacgaaggtaggtgaccataca 618 Query: 833 gagtgtataacatttgatcttcgaccttcggatgctatcaatattgctgttcgctgcaag 892 || |||| || |||||||| ||||||| ||||| || || |||||||||||||||||| Sbjct: 619 gaaagtatcacctttgatctaagaccttcagatgccataaacattgctgttcgctgcaag 678 Query: 893 gttcctatacaagtacataggagtcttgcatacagcgacggcataagatcagtcgagcca 952 |||||||||||||| ||||| || ||||||||||| || ||||||||||||||||||||| Sbjct: 679 gttcctatacaagtccatagaagccttgcatacagtgatggcataagatcagtcgagcca 738 Query: 953 gcaaaatttgtggcctcagctggcctatcagatggtttgttgtttactgaacttgacaga 1012 |||| | | | | |||| ||| | || || || ||||||||||| |||||||||||| Sbjct: 739 gcaagaatggcgatagcagccggcatgtctgacgggttgttgtttacagaacttgacaga 798 Query: 1013 cctgatggacagccctgcgttgaggctcaagagtttagtttggtgcgaaacatgttcatt 1072 |||||||| ||||| || || ||||||||||||||| | ||| | || |||||| ||||| Sbjct: 799 cctgatgggcagccatgtgtcgaggctcaagagtttggattgatccggaacatgctcatt 858 Query: 1073 gcagttgttgaagagagatacaaagatgcagcaacatggaaggacaaactaatgaagctg 1132 |||| |||||||||||||||||||||||| ||||| |||| ||||||||| ||| |||| Sbjct: 859 gcagctgttgaagagagatacaaagatgctgcaacgtggagggacaaactgatgctgctg 918 Query: 1133 aggtccaagcggaagaactgggcctgaaag 1162 ||||| |||||||| ||||||||||||||| Sbjct: 919 aggtctaagcggaaaaactgggcctgaaag 948
>gb|DQ167205.1| Zea mays putative wound responsive protein mRNA, complete cds Length = 717 Score = 525 bits (265), Expect = e-145 Identities = 457/521 (87%) Strand = Plus / Plus Query: 378 gtagcttcagctcctcatctgatggtaatggatacatggctagaaacttcaatgaaaatg 437 ||||||||||||| || |||||||| ||||||||||||||| ||||||| | || | || Sbjct: 182 gtagcttcagctcgtcttctgatggcaatggatacatggctggaaactttagcgacagtg 241 Query: 438 atgaagattatgttaattccactgtgcttgaagctgttgaggtcagaagtggatcagaag 497 ||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 242 atgaagattatgttaattctactgtgctagaagcagttgaggtgagaagtggatcggaag 301 Query: 498 gatatatagtaaagatgcgagatgggaaaaacctgctgtgtgtgcataataattctcaag 557 ||||| | ||||||||||||||||||||||| ||| ||||| ||||| |||||||||| Sbjct: 302 gatatgtgataaagatgcgagatgggaaaaacttgcgttgtgtccataacaattctcaag 361 Query: 558 ggagagagattccagagagtgcaccacaacctgctatcgttttaagaatcgaagatggaa 617 ||||| | ||||||||||||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 362 ggagaaatattccagagagtgcaccccaacctgctattgttttgaggattgaagatggaa 421 Query: 618 gtggaactttacttccaatcattgttttggagatgccaagtgtacttctgatggctgcta 677 | | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 422 gcgaaactttacttccaatcattgttttggagatgccaagtgtacttctgatggcggcta 481 Query: 678 ttcgtcatgttcatattgcaagacctaccatatatcaagttgttaaggaactgattgata 737 ||||| |||| || |||||| |||| ||||||||||||||||| |||||| ||||||||| Sbjct: 482 ttcgtaatgtccacattgcacgaccaaccatatatcaagttgtcaaggaaatgattgata 541 Query: 738 agatgggctatgaggtaaaacttgttcgagtaaacaaaagaattcaagaagcatactgtg 797 | |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 542 aaatgggctatgaggtaaaacttgttcgggtaaacaaaagaattcaagaagcgtactgtg 601 Query: 798 ccgagctctatctaacaaagactggagatcaaacagagtgtataacatttgatcttcgac 857 | || || | ||||||||||| || ||| ||||| | || || || |||||||| | Sbjct: 602 ctgaactttgtctaacaaagattgatgattctacagacagcatcaccttcgatcttcggc 661 Query: 858 cttcggatgctatcaatattgctgttcgctgcaaggttcct 898 |||| ||||| || || ||||||||||| |||||||||||| Sbjct: 662 cttcagatgccataaacattgctgttcgttgcaaggttcct 702
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 174 bits (88), Expect = 6e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 473 gttgaggtcagaagtggatcagaaggatatatagtaaagatgcgagatgggaaaaacctg 532 |||||||| |||||||| |||| |||||| || | ||||||||||||||||||||| || Sbjct: 16335945 gttgaggtgagaagtggggcagagggatatgtaatcaagatgcgagatgggaaaaacttg 16335886 Query: 533 ctgtgtgtgcataataattctcaagggagagagattccagagagtgcaccacaacctgct 592 |||||||| |||||||||||||||||| | |||||||| || ||||||||||||||| Sbjct: 16335885 agatgtgtgcacaataattctcaagggagaaatattccagaaagcgcaccacaacctgct 16335826 Query: 593 atcgttttaagaatcgaagatggaagtggaactttacttccaatcattgttt 644 || ||||| || || ||||||||||||| ||||||||||||||||||||||| Sbjct: 16335825 attgttttgaggattgaagatggaagtgaaactttacttccaatcattgttt 16335774 Score = 99.6 bits (50), Expect = 3e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 378 gtagcttcagctcctcatctgatggtaatggatacatggctagaaacttcaatgaaaatg 437 ||||||||||||| || || |||||||||||||| |||||| ||||||| | ||| | || Sbjct: 16337152 gtagcttcagctcgtcgtccgatggtaatggatatatggctggaaactttagtgagagtg 16337093 Query: 438 atgaagattatgttaattccactgtgcttgaagc 471 ||||||||||||||||||| |||||||| ||||| Sbjct: 16337092 atgaagattatgttaattctactgtgctagaagc 16337059 Score = 97.6 bits (49), Expect = 1e-16 Identities = 82/93 (88%) Strand = Plus / Minus Query: 1009 cagacctgatggacagccctgcgttgaggctcaagagtttagtttggtgcgaaacatgtt 1068 |||||||||||| ||||| || || ||||||||||||||| | ||| | || |||||| | Sbjct: 16333915 cagacctgatgggcagccatgtgtcgaggctcaagagtttggattgatccggaacatgct 16333856 Query: 1069 cattgcagttgttgaagagagatacaaagatgc 1101 |||||||| |||||||||||||||||||||||| Sbjct: 16333855 cattgcagctgttgaagagagatacaaagatgc 16333823 Score = 91.7 bits (46), Expect = 7e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 891 aggttcctatacaagtacataggagtcttgcatacagcgacggcataagatcagtcgagc 950 |||||||||||||||| ||||| || ||||||||||| || ||||||||||||||||||| Sbjct: 16334673 aggttcctatacaagtccatagaagccttgcatacagtgatggcataagatcagtcgagc 16334614 Query: 951 cagcaa 956 |||||| Sbjct: 16334613 cagcaa 16334608 Score = 81.8 bits (41), Expect = 7e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 695 gcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgaggta 754 |||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 16335563 gcaagaccaaccatatatcaagttgtgaaggagatgattgataagatgggttatgaggta 16335504 Query: 755 a 755 | Sbjct: 16335503 a 16335503 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Minus Query: 1101 cagcaacatggaaggacaaactaatgaagctgaggtccaagcggaagaactgggcctgaa 1160 ||||||| |||| ||||||||| ||| ||||||||| |||||||| ||||||||||||| Sbjct: 16333529 cagcaacgtggagggacaaactgatgctgctgaggtctaagcggaaaaactgggcctgaa 16333470 Query: 1161 aggtt 1165 ||||| Sbjct: 16333469 aggtt 16333465 Score = 65.9 bits (33), Expect = 4e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 750 aggtaaaacttgttcgagtaaacaaaagaattcaagaagcatactgtgc 798 |||||||||| ||||| |||| |||||||||||||||||||||||||| Sbjct: 16335395 aggtaaaactggttcggataaataaaagaattcaagaagcatactgtgc 16335347 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 645 tggagatgccaagtgtacttctgatggctgctattcg 681 |||| |||||||| ||||||||||||||||||||||| Sbjct: 16335689 tggaaatgccaagcgtacttctgatggctgctattcg 16335653 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Minus Query: 845 tttgatcttcgaccttcggatgctatcaatattgctgttcgctgcaaggt 894 |||||||| ||||||| ||||| || || |||||||||||||||||||| Sbjct: 16335199 tttgatctaagaccttcagatgccataaacattgctgttcgctgcaaggt 16335150
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 174 bits (88), Expect = 6e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 473 gttgaggtcagaagtggatcagaaggatatatagtaaagatgcgagatgggaaaaacctg 532 |||||||| |||||||| |||| |||||| || | ||||||||||||||||||||| || Sbjct: 41797 gttgaggtgagaagtggggcagagggatatgtaatcaagatgcgagatgggaaaaacttg 41738 Query: 533 ctgtgtgtgcataataattctcaagggagagagattccagagagtgcaccacaacctgct 592 |||||||| |||||||||||||||||| | |||||||| || ||||||||||||||| Sbjct: 41737 agatgtgtgcacaataattctcaagggagaaatattccagaaagcgcaccacaacctgct 41678 Query: 593 atcgttttaagaatcgaagatggaagtggaactttacttccaatcattgttt 644 || ||||| || || ||||||||||||| ||||||||||||||||||||||| Sbjct: 41677 attgttttgaggattgaagatggaagtgaaactttacttccaatcattgttt 41626 Score = 99.6 bits (50), Expect = 3e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 378 gtagcttcagctcctcatctgatggtaatggatacatggctagaaacttcaatgaaaatg 437 ||||||||||||| || || |||||||||||||| |||||| ||||||| | ||| | || Sbjct: 43004 gtagcttcagctcgtcgtccgatggtaatggatatatggctggaaactttagtgagagtg 42945 Query: 438 atgaagattatgttaattccactgtgcttgaagc 471 ||||||||||||||||||| |||||||| ||||| Sbjct: 42944 atgaagattatgttaattctactgtgctagaagc 42911 Score = 97.6 bits (49), Expect = 1e-16 Identities = 82/93 (88%) Strand = Plus / Minus Query: 1009 cagacctgatggacagccctgcgttgaggctcaagagtttagtttggtgcgaaacatgtt 1068 |||||||||||| ||||| || || ||||||||||||||| | ||| | || |||||| | Sbjct: 39767 cagacctgatgggcagccatgtgtcgaggctcaagagtttggattgatccggaacatgct 39708 Query: 1069 cattgcagttgttgaagagagatacaaagatgc 1101 |||||||| |||||||||||||||||||||||| Sbjct: 39707 cattgcagctgttgaagagagatacaaagatgc 39675 Score = 91.7 bits (46), Expect = 7e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 891 aggttcctatacaagtacataggagtcttgcatacagcgacggcataagatcagtcgagc 950 |||||||||||||||| ||||| || ||||||||||| || ||||||||||||||||||| Sbjct: 40525 aggttcctatacaagtccatagaagccttgcatacagtgatggcataagatcagtcgagc 40466 Query: 951 cagcaa 956 |||||| Sbjct: 40465 cagcaa 40460 Score = 81.8 bits (41), Expect = 7e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 695 gcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgaggta 754 |||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 41415 gcaagaccaaccatatatcaagttgtgaaggagatgattgataagatgggttatgaggta 41356 Query: 755 a 755 | Sbjct: 41355 a 41355 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Minus Query: 1101 cagcaacatggaaggacaaactaatgaagctgaggtccaagcggaagaactgggcctgaa 1160 ||||||| |||| ||||||||| ||| ||||||||| |||||||| ||||||||||||| Sbjct: 39381 cagcaacgtggagggacaaactgatgctgctgaggtctaagcggaaaaactgggcctgaa 39322 Query: 1161 aggtt 1165 ||||| Sbjct: 39321 aggtt 39317 Score = 65.9 bits (33), Expect = 4e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 750 aggtaaaacttgttcgagtaaacaaaagaattcaagaagcatactgtgc 798 |||||||||| ||||| |||| |||||||||||||||||||||||||| Sbjct: 41247 aggtaaaactggttcggataaataaaagaattcaagaagcatactgtgc 41199 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 645 tggagatgccaagtgtacttctgatggctgctattcg 681 |||| |||||||| ||||||||||||||||||||||| Sbjct: 41541 tggaaatgccaagcgtacttctgatggctgctattcg 41505 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Minus Query: 845 tttgatcttcgaccttcggatgctatcaatattgctgttcgctgcaaggt 894 |||||||| ||||||| ||||| || || |||||||||||||||||||| Sbjct: 41051 tttgatctaagaccttcagatgccataaacattgctgttcgctgcaaggt 41002
>emb|CT029826.1| Poplar cDNA sequences Length = 426 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 425 ttcaatgaaaatgatgaagattatgttaattccactgtgcttgaagctgttgaggt 480 |||||||||||||||||||||||||| || |||| ||| |||||||||||||||| Sbjct: 30 ttcaatgaaaatgatgaagattatgtcaactccagtgtcgttgaagctgttgaggt 85 Score = 58.0 bits (29), Expect = 1e-04 Identities = 110/137 (80%) Strand = Plus / Plus Query: 632 ccaatcattgttttggagatgccaagtgtacttctgatggctgctattcgtcatgttcat 691 ||||| ||||||||||||||||||||||| | || ||||| || | || |||| || Sbjct: 237 ccaataattgttttggagatgccaagtgtgttgctcatggcagcagtgcgcaatgtccaa 296 Query: 692 attgcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgag 751 ||||||||||| || || |||||||| || ||||| || |||| |||||||| | ||| Sbjct: 297 attgcaagaccaactatgtatcaagtggtgaaggacatggttgaaaagatgggttttgaa 356 Query: 752 gtaaaacttgttcgagt 768 || ||||||||| |||| Sbjct: 357 gtcaaacttgttagagt 373
>emb|CT029825.1| Poplar cDNA sequences Length = 426 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 425 ttcaatgaaaatgatgaagattatgttaattccactgtgcttgaagctgttgaggt 480 |||||||||||||||||||||||||| || |||| ||| |||||||||||||||| Sbjct: 397 ttcaatgaaaatgatgaagattatgtcaactccagtgtcgttgaagctgttgaggt 342 Score = 58.0 bits (29), Expect = 1e-04 Identities = 110/137 (80%) Strand = Plus / Minus Query: 632 ccaatcattgttttggagatgccaagtgtacttctgatggctgctattcgtcatgttcat 691 ||||| ||||||||||||||||||||||| | || ||||| || | || |||| || Sbjct: 190 ccaataattgttttggagatgccaagtgtgttgctcatggcagcagtgcgcaatgtccaa 131 Query: 692 attgcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgag 751 ||||||||||| || || |||||||| || ||||| || |||| |||||||| | ||| Sbjct: 130 attgcaagaccaactatgtatcaagtggtgaaggacatggttgaaaagatgggttttgaa 71 Query: 752 gtaaaacttgttcgagt 768 || ||||||||| |||| Sbjct: 70 gtcaaacttgttagagt 54
>gb|BT012880.1| Lycopersicon esculentum clone 113981F, mRNA sequence Length = 1413 Score = 54.0 bits (27), Expect = 0.001 Identities = 105/131 (80%) Strand = Plus / Plus Query: 638 attgttttggagatgccaagtgtacttctgatggctgctattcgtcatgttcatattgca 697 |||||||||||||||||||||| | | || ||||| ||| | ||| |||| || ||||| Sbjct: 640 attgttttggagatgccaagtgcattgctcatggcagctgtgcgtaatgtccaaattgcc 699 Query: 698 agacctaccatatatcaagttgttaaggaactgattgataagatgggctatgaggtaaaa 757 |||| || || ||||||||||| || || || |||| |||||||| || ||| ||| Sbjct: 700 cgaccaacaatgtatcaagttgtgaatgacatggttgagaagatgggttacacggttaaa 759 Query: 758 cttgttcgagt 768 ||||||||||| Sbjct: 760 cttgttcgagt 770
>dbj|AB009885.1| Nicotiana tabacum wound inducive mRNA , complete cds Length = 1525 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 845 tttgatcttcgaccttcggatgctatcaatattgctgttcgctgcaaggttcctatacaa 904 ||||||||||| ||||| ||||| ||||| |||||||| | |||||||| || |||||| Sbjct: 892 tttgatcttcgtccttctgatgcgatcaacattgctgtgcaatgcaaggtgccaatacaa 951 Query: 905 gt 906 || Sbjct: 952 gt 953 Score = 48.1 bits (24), Expect = 0.092 Identities = 30/32 (93%) Strand = Plus / Plus Query: 629 cttccaatcattgttttggagatgccaagtgt 660 ||||| || ||||||||||||||||||||||| Sbjct: 676 cttcctataattgttttggagatgccaagtgt 707
>ref|NM_179560.2| Arabidopsis thaliana unknown protein (AT1G75380) mRNA, complete cds Length = 1459 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 395 tctgatggtaatggatacatggctagaaacttcaatgaaaatgatgaagattatgttaat 454 ||||||||||||||| || ||| ||| ||||||||||||||||| || |||||||| Sbjct: 364 tctgatggtaatggaagcactgctgaaaatttcaatgaaaatgatgaggaatatgttaac 423 Query: 455 tccactgtgcttgaagctgttgaggtcagaagtggatcaga 495 || | ||| | ||||||||||| || | ||||||| |||| Sbjct: 424 tctagtgtagtggaagctgttgaagtaaaaagtggagcaga 464 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 692 attgcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgag 751 ||||||||||| ||||| |||||||| || |||||| || | || |||||||| || || Sbjct: 661 attgcaagaccaaccatgtatcaagtggtgaaggaaatggtggacaagatgggttacgaa 720 Query: 752 gtaaaacttgttcgagtaaacaaaagaattcaagaagcata 792 || | ||||||| |||| | ||||||| |||| || ||||| Sbjct: 721 gttagacttgttagagtcaccaaaagagttcacgaggcata 761
>ref|NM_179559.1| Arabidopsis thaliana unknown protein (AT1G75380) mRNA, complete cds Length = 1467 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 395 tctgatggtaatggatacatggctagaaacttcaatgaaaatgatgaagattatgttaat 454 ||||||||||||||| || ||| ||| ||||||||||||||||| || |||||||| Sbjct: 372 tctgatggtaatggaagcactgctgaaaatttcaatgaaaatgatgaggaatatgttaac 431 Query: 455 tccactgtgcttgaagctgttgaggtcagaagtggatcaga 495 || | ||| | ||||||||||| || | ||||||| |||| Sbjct: 432 tctagtgtagtggaagctgttgaagtaaaaagtggagcaga 472 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 692 attgcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgag 751 ||||||||||| ||||| |||||||| || |||||| || | || |||||||| || || Sbjct: 669 attgcaagaccaaccatgtatcaagtggtgaaggaaatggtggacaagatgggttacgaa 728 Query: 752 gtaaaacttgttcgagtaaacaaaagaattcaagaagcata 792 || | ||||||| |||| | ||||||| |||| || ||||| Sbjct: 729 gttagacttgttagagtcaccaaaagagttcacgaggcata 769
>ref|NM_106192.2| Arabidopsis thaliana unknown protein (AT1G75380) mRNA, complete cds Length = 1547 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 395 tctgatggtaatggatacatggctagaaacttcaatgaaaatgatgaagattatgttaat 454 ||||||||||||||| || ||| ||| ||||||||||||||||| || |||||||| Sbjct: 377 tctgatggtaatggaagcactgctgaaaatttcaatgaaaatgatgaggaatatgttaac 436 Query: 455 tccactgtgcttgaagctgttgaggtcagaagtggatcaga 495 || | ||| | ||||||||||| || | ||||||| |||| Sbjct: 437 tctagtgtagtggaagctgttgaagtaaaaagtggagcaga 477 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 692 attgcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgag 751 ||||||||||| ||||| |||||||| || |||||| || | || |||||||| || || Sbjct: 674 attgcaagaccaaccatgtatcaagtggtgaaggaaatggtggacaagatgggttacgaa 733 Query: 752 gtaaaacttgttcgagtaaacaaaagaattcaagaagcata 792 || | ||||||| |||| | ||||||| |||| || ||||| Sbjct: 734 gttagacttgttagagtcaccaaaagagttcacgaggcata 774
>gb|AY066045.1| Arabidopsis thaliana At1g75380/F1B16_15 mRNA, complete cds Length = 978 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 395 tctgatggtaatggatacatggctagaaacttcaatgaaaatgatgaagattatgttaat 454 ||||||||||||||| || ||| ||| ||||||||||||||||| || |||||||| Sbjct: 208 tctgatggtaatggaagcactgctgaaaatttcaatgaaaatgatgaggaatatgttaac 267 Query: 455 tccactgtgcttgaagctgttgaggtcagaagtggatcaga 495 || | ||| | ||||||||||| || | ||||||| |||| Sbjct: 268 tctagtgtagtggaagctgttgaagtaaaaagtggagcaga 308 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 692 attgcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgag 751 ||||||||||| ||||| |||||||| || |||||| || | || |||||||| || || Sbjct: 505 attgcaagaccaaccatgtatcaagtggtgaaggaaatggtggacaagatgggttacgaa 564 Query: 752 gtaaaacttgttcgagtaaacaaaagaattcaagaagcata 792 || | ||||||| |||| | ||||||| |||| || ||||| Sbjct: 565 gttagacttgttagagtcaccaaaagagttcacgaggcata 605
>gb|AY054232.1| Arabidopsis thaliana At1g75380/F1B16_15 mRNA, complete cds Length = 1374 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 395 tctgatggtaatggatacatggctagaaacttcaatgaaaatgatgaagattatgttaat 454 ||||||||||||||| || ||| ||| ||||||||||||||||| || |||||||| Sbjct: 372 tctgatggtaatggaagcactgctgaaaatttcaatgaaaatgatgaggaatatgttaac 431 Query: 455 tccactgtgcttgaagctgttgaggtcagaagtggatcaga 495 || | ||| | ||||||||||| || | ||||||| |||| Sbjct: 432 tctagtgtagtggaagctgttgaagtaaaaagtggagcaga 472 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 692 attgcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgag 751 ||||||||||| ||||| |||||||| || |||||| || | || |||||||| || || Sbjct: 669 attgcaagaccaaccatgtatcaagtggtgaaggaaatggtggacaagatgggttacgaa 728 Query: 752 gtaaaacttgttcgagtaaacaaaagaattcaagaagcata 792 || | ||||||| |||| | ||||||| |||| || ||||| Sbjct: 729 gttagacttgttagagtcaccaaaagagttcacgaggcata 769
>gb|AY087417.1| Arabidopsis thaliana clone 35182 mRNA, complete sequence Length = 1449 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 395 tctgatggtaatggatacatggctagaaacttcaatgaaaatgatgaagattatgttaat 454 ||||||||||||||| || ||| ||| ||||||||||||||||| || |||||||| Sbjct: 377 tctgatggtaatggaagcactgctgaaaatttcaatgaaaatgatgaggaatatgttaac 436 Query: 455 tccactgtgcttgaagctgttgaggtcagaagtggatcaga 495 || | ||| | ||||||||||| || | ||||||| |||| Sbjct: 437 tctagtgtagtggaagctgttgaagtaaaaagtggagcaga 477 Score = 50.1 bits (25), Expect = 0.023 Identities = 82/101 (81%) Strand = Plus / Plus Query: 692 attgcaagacctaccatatatcaagttgttaaggaactgattgataagatgggctatgag 751 ||||||||||| ||||| |||||||| || |||||| || | || |||||||| || || Sbjct: 674 attgcaagaccaaccatgtatcaagtggtgaaggaaatggtggacaagatgggttacgaa 733 Query: 752 gtaaaacttgttcgagtaaacaaaagaattcaagaagcata 792 || | ||||||| |||| | ||||||| |||| || ||||| Sbjct: 734 gttagacttgttagagtcaccaaaagagttcacgaggcata 774
>gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 182933 Score = 48.1 bits (24), Expect = 0.092 Identities = 24/24 (100%) Strand = Plus / Minus Query: 555 aagggagagagattccagagagtg 578 |||||||||||||||||||||||| Sbjct: 112164 aagggagagagattccagagagtg 112141
>gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201259 Score = 48.1 bits (24), Expect = 0.092 Identities = 24/24 (100%) Strand = Plus / Minus Query: 555 aagggagagagattccagagagtg 578 |||||||||||||||||||||||| Sbjct: 2025 aagggagagagattccagagagtg 2002
>gb|AC023754.3|AC023754 Arabidopsis thaliana chromosome I BAC F1B16 genomic sequence, complete sequence Length = 100685 Score = 46.1 bits (23), Expect = 0.36 Identities = 50/59 (84%) Strand = Plus / Plus Query: 395 tctgatggtaatggatacatggctagaaacttcaatgaaaatgatgaagattatgttaa 453 ||||||||||||||| || ||| ||| ||||||||||||||||| || |||||||| Sbjct: 78384 tctgatggtaatggaagcactgctgaaaatttcaatgaaaatgatgaggaatatgttaa 78442
>gb|AC189558.1| Brassica rapa subsp. pekinensis clone KBrH006P24, complete sequence Length = 153065 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Minus Query: 845 tttgatcttcgaccttcggatgctatcaatattgctgt 882 ||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 26110 tttgatcttcgtccttcagatgctattaatatagctgt 26073 Score = 42.1 bits (21), Expect = 5.7 Identities = 42/49 (85%) Strand = Plus / Minus Query: 425 ttcaatgaaaatgatgaagattatgttaattccactgtgcttgaagctg 473 ||||| || ||||||||||||||||| || || | ||| |||||||||| Sbjct: 26955 ttcaacgagaatgatgaagattatgtcaagtctagtgtacttgaagctg 26907
>ref|NM_100239.3| Arabidopsis thaliana catalytic/ protein phosphatase type 2C (AT1G03590) mRNA, complete cds Length = 1797 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 493 agaaggatatatagtaaagatg 514 |||||||||||||||||||||| Sbjct: 1790 agaaggatatatagtaaagatg 1769
>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of 11 of the complete sequence Length = 613322 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 555 aagggagagagattccagagag 576 |||||||||||||||||||||| Sbjct: 257775 aagggagagagattccagagag 257754
>emb|AL162717.10| Human DNA sequence from clone RP11-123H22 on chromosome 13q14.2-21.2 Contains a novel gene, complete sequence Length = 153859 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 555 aagggagagagattccagagag 576 |||||||||||||||||||||| Sbjct: 137305 aagggagagagattccagagag 137284
>gb|AC002560.2|AC002560 Genomic sequence for Arabidopsis thaliana BAC F21B7 from chromosome I, complete sequence Length = 101176 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 493 agaaggatatatagtaaagatg 514 |||||||||||||||||||||| Sbjct: 58075 agaaggatatatagtaaagatg 58096
>gb|AF107885.2|DJ270M14 Homo sapiens chromosome 14q24.3 clone BAC270M14 transforming growth factor-beta 3 (TGF-beta 3) gene, complete cds; and unknown genes Length = 192126 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 428 aatgaaaatgatgaagattatg 449 |||||||||||||||||||||| Sbjct: 72482 aatgaaaatgatgaagattatg 72461
>emb|AL929165.9| Mouse DNA sequence from clone RP23-446D4 on chromosome 2, complete sequence Length = 181326 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1369 tgtaaattcagactaatattca 1390 |||||||||||||||||||||| Sbjct: 171910 tgtaaattcagactaatattca 171889
>dbj|AB079670.1| Arabidopsis thaliana AtPPC6;6 mRNA for protein phosphatase 2C, partial cds Length = 1491 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 493 agaaggatatatagtaaagatg 514 |||||||||||||||||||||| Sbjct: 1482 agaaggatatatagtaaagatg 1461
>gb|AC183360.4| Spermophilus tridecemlineatus clone VMRC20-708M24, complete sequence Length = 153227 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 ctccattggtcacatactata 78 ||||||||||||||||||||| Sbjct: 145136 ctccattggtcacatactata 145116
>gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, complete sequence Length = 176410 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 418 tagaaacttcaatgaaaatga 438 ||||||||||||||||||||| Sbjct: 115159 tagaaacttcaatgaaaatga 115139
>gb|AC164562.4| Mus musculus BAC clone RP23-148G12 from chromosome 3, complete sequence Length = 202591 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 gagagtgcaccacaacctgct 592 ||||||||||||||||||||| Sbjct: 4463 gagagtgcaccacaacctgct 4443
>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence Length = 174764 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 815 aagactggagatcaaacagag 835 ||||||||||||||||||||| Sbjct: 51627 aagactggagatcaaacagag 51647
>gb|AC124186.3| Mus musculus BAC clone RP23-232B20 from chromosome 3, complete sequence Length = 195957 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 gagagtgcaccacaacctgct 592 ||||||||||||||||||||| Sbjct: 122310 gagagtgcaccacaacctgct 122290
>gb|AC118595.6| Mus musculus chromosome 3, clone RP24-481I21, complete sequence Length = 248188 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 caatgaaaatgatgaagattatgtt 451 |||| |||||||||||||||||||| Sbjct: 115230 caattaaaatgatgaagattatgtt 115206
>dbj|AK123218.1| Homo sapiens cDNA FLJ41224 fis, clone BRAMY2030098 Length = 2861 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 agcagggcttcctgctgccct 243 ||||||||||||||||||||| Sbjct: 408 agcagggcttcctgctgccct 428
>emb|AL663123.1| Human DNA sequence from clone RP11-4K3 on chromosome 1 Contains the 3' end of a novel gene (KIAA1037), a novel gene, a SMT3 suppressor of mif two 3 homolog 2 (yeast) (SMT3H2) pseudogene, a novel gene (DKFZP564D0478), an actin, beta (ACTB) pseudogene, the gene for NADPH oxidase-related, C2 domain-containing protein (JFC1), the MAP3K6 gene for mitogen-activated protein kinase kinase kinase 6, the FCN3 gene for ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) and a CpG island, complete sequence Length = 81740 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 agcagggcttcctgctgccct 243 ||||||||||||||||||||| Sbjct: 45492 agcagggcttcctgctgccct 45472
>gb|AC155839.4| Mus musculus 6 BAC RP24-96J4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173368 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 caagcagggcttcctgctgcc 241 ||||||||||||||||||||| Sbjct: 137490 caagcagggcttcctgctgcc 137510
>gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosome 13, complete sequence Length = 196991 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 633 caatcattgttttggagatgc 653 ||||||||||||||||||||| Sbjct: 133983 caatcattgttttggagatgc 134003
>gb|AC069160.7|AC069160 Arabidopsis thaliana chromosome 1 BAC T9I1 genomic sequence, complete sequence Length = 99241 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 tatttgtcgtagcttcagctc 390 ||||||||||||||||||||| Sbjct: 49147 tatttgtcgtagcttcagctc 49127
>ref|XM_724949.1| Plasmodium yoelii yoelii str. 17XNL CCAAT-box DNA binding protein subunit B (PY02177) partial mRNA Length = 1479 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 aatgaaaatgatgaagattat 448 ||||||||||||||||||||| Sbjct: 940 aatgaaaatgatgaagattat 960 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 278,349,241 Number of extensions: 15615099 Number of successful extensions: 286690 Number of sequences better than 10.0: 41 Number of HSP's gapped: 286683 Number of HSP's successfully gapped: 80 Length of query: 1485 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1462 Effective length of database: 18,503,978,556 Effective search space: 27052816648872 Effective search space used: 27052816648872 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)