ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf2l21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0564500:Os04g0564500 | 353 | 1e-97 | 2 | AK071737:Os09g0323500 | 272 | 2e-73 | 3 | AK122100:Os03g0749300 | 31 | 1.7 | 4 | AK119203:Os03g0749300 | 31 | 1.7 | 5 | AK065044:Os03g0749300 | 31 | 1.7 | 6 | Os12g0524600:Os12g0524600 | 30 | 2.2 | 7 | Os09g0401600:Os09g0401600 | 30 | 2.8 | 8 | Os01g0170300:Os01g0170300 | 28 | 3.4 | 9 | AK110092: | 28 | 8.2 |
|---|
>Os04g0564500:Os04g0564500 | Length = 314 Score = 353 bits (905), Expect = 1e-97 Identities = 190/306 (62%), Positives = 205/306 (66%), Gaps = 28/306 (9%) Frame = +2 Query: 86 MCIAAWTWQAHPAYGLLLLFNRDEYHSR----------------------------PTRP 181 MCIAAW WQ+ PA+ LLLLFNRDEYHSR PT+P Sbjct: 1 MCIAAWAWQSQPAHRLLLLFNRDEYHSRCAPCSVPSIPTPYNSHLLTRARRDFLSRPTQP 60 Query: 182 AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLTNVREASPRVEARSRGELPVRF 361 A AFLTNVRE V RGELPVRF Sbjct: 61 AGWWAAGKAEVKLILGGRDELGGGTWLGCTRDGKLAFLTNVREPGTLVGPNVRGELPVRF 120 Query: 362 LQGRQGPLEYATEIAKEADQYNGFNLVLADVHSGTMVYISNKPGDAPVVQTVSPGCHVLS 541 LQG Q PLEYA EIAKEADQYNGFNLVLADV SG M YISN+P PVVQ V PG HVLS Sbjct: 121 LQGNQCPLEYAEEIAKEADQYNGFNLVLADVQSGNMAYISNRPEGDPVVQKVLPGFHVLS 180 Query: 542 NAAIDSPWPKVLRLGQNFNSFLAAHDDAEVSLKQMVEELMTDTVKADRSAVPDTGVDPDW 721 NAAID PWPK+LRLGQ+FN FLA D AEVSL+QMVEELM D VKAD+SAVPDTGVDPDW Sbjct: 181 NAAIDCPWPKMLRLGQSFNRFLATQDGAEVSLQQMVEELMMDPVKADKSAVPDTGVDPDW 240 Query: 722 EYQLSSIFIDTEKGQARYGTRSMAAIGVKLDGEVTFYERSLASSLWNENLVQFRMEMAQ* 901 EYQLSSIFIDTEKGQARYGTRSM A+ VK +GEVTFYER L S+LW ENL+QF +EM+Q Sbjct: 241 EYQLSSIFIDTEKGQARYGTRSMTALAVKFNGEVTFYERYLESNLWKENLMQFELEMSQW 300 Query: 902 QALRGT 919 + LRGT Sbjct: 301 EDLRGT 306
>AK071737:Os09g0323500 | Length = 266 Score = 272 bits (696), Expect = 2e-73 Identities = 137/269 (50%), Positives = 171/269 (63%), Gaps = 1/269 (0%) Frame = +2 Query: 86 MCIAAWTWQAHPAYGLLLLFNRDEYHSRPTRPAQXXXXXXXXXXXXXXXXXXXXXXXXXX 265 MCIAAW WQAHP + LLLL NRDE+HSRPT+ Sbjct: 1 MCIAAWVWQAHPQHQLLLLLNRDEFHSRPTKAV---GWWGEGSKKILGGRDVLGGGTWMG 57 Query: 266 XXXXXXXAFLTNVREASPRVEARSRGELPVRFLQGRQGPLEYATEIAKEADQYNGFNLVL 445 AFLTNV E AR+RG+LP+RFLQ + PLE ATE+AKEAD+YNGFNLVL Sbjct: 58 CTKDGRLAFLTNVLEPDAMPGARTRGDLPLRFLQSNKSPLEVATEVAKEADEYNGFNLVL 117 Query: 446 ADVHSGTMVYISNKP-GDAPVVQTVSPGCHVLSNAAIDSPWPKVLRLGQNFNSFLAAHDD 622 AD+ + MVY+SN+P G +Q VSPG HVLSNA +DSPW K +RLG+NF L H D Sbjct: 118 ADLTTNVMVYVSNRPKGQPATIQLVSPGLHVLSNARLDSPWQKAIRLGKNFREHLRKHGD 177 Query: 623 AEVSLKQMVEELMTDTVKADRSAVPDTGVDPDWEYQLSSIFIDTEKGQARYGTRSMAAIG 802 EV K +VE LMTDT KAD+ +P+TG DP+WE+ LSSIFI+ + Q YGTRS A + Sbjct: 178 DEVEAKDIVERLMTDTTKADKDRLPNTGCDPNWEHGLSSIFIEVQTDQGLYGTRSTAVLS 237 Query: 803 VKLDGEVTFYERSLASSLWNENLVQFRME 889 V DGE + YE+ L S +W ++ V +++E Sbjct: 238 VNYDGEASLYEKYLESGIWKDHTVHYQIE 266
>AK122100:Os03g0749300 | Length = 625 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 735 LNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASS 616 + W Q G+ +GT LSA+ +V S+T+ + E SS Sbjct: 452 ITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSS 491
>AK119203:Os03g0749300 | Length = 475 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 735 LNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASS 616 + W Q G+ +GT LSA+ +V S+T+ + E SS Sbjct: 302 ITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSS 341
>AK065044:Os03g0749300 | Length = 625 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 735 LNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASS 616 + W Q G+ +GT LSA+ +V S+T+ + E SS Sbjct: 452 ITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSS 491
>Os12g0524600:Os12g0524600 | Length = 1425 Score = 30.4 bits (67), Expect = 2.2 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 11/75 (14%) Frame = -1 Query: 957 SVSLCRHTHHPIYVPRKACYCAISIRNCT-RFSFHKL----------LAKDLS*KVTSPS 811 SVS RH P++ PR++C A CT R H L + S + PS Sbjct: 719 SVSPERHRREPLHPPRRSCSAARPSPPCTGRPHLHHLRHRSGKVVLGIVSPPSKSLRGPS 778 Query: 810 SFTPMAAMLRVPYLA 766 S +P+ ++ VP +A Sbjct: 779 SSSPIVLVVDVPSVA 793
>Os09g0401600:Os09g0401600 | Length = 433 Score = 30.0 bits (66), Expect = 2.8 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 18 STHVFRQSPDPFAFSTGPSPRRPCASRR 101 + HV PDP + + P+P RP A RR Sbjct: 29 TAHVLGSGPDPSSRPSNPTPSRPAAPRR 56
>Os01g0170300:Os01g0170300 | Length = 1117 Score = 27.7 bits (60), Expect(2) = 3.4 Identities = 15/56 (26%), Positives = 22/56 (39%) Frame = -3 Query: 931 PPNICSSQGLLLCHLHSKLY*ILIPQAAGQGPLVESYLTIQFHPDGGHAPCPVSCL 764 PP I + L LH ++P QG YL + ++ GG P + L Sbjct: 507 PPEIAGCRNLTFVDLHGNAIAGVLPPGLFQGTPSLQYLDLSYNAIGGAIPANIGML 562 Score = 20.4 bits (41), Expect(2) = 3.4 Identities = 6/18 (33%), Positives = 11/18 (61%) Frame = -1 Query: 990 STGTIQSCLPPSVSLCRH 937 ST + +PP ++ CR+ Sbjct: 498 STNRLSGAIPPEIAGCRN 515
>AK110092: | Length = 981 Score = 28.5 bits (62), Expect = 8.2 Identities = 23/62 (37%), Positives = 29/62 (46%) Frame = -1 Query: 792 AMLRVPYLACPFSVSMNIELNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASSC 613 AML V A P + W +S TP+ A L AL SS ++CF T A+S Sbjct: 600 AMLPVADQAWPLR-----SVEWVLES-DTPIPPNAALPALDTIPPSSLSLCFTSTPAASG 653 Query: 612 AA 607 AA Sbjct: 654 AA 655 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,372,630 Number of extensions: 752095 Number of successful extensions: 2417 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2413 Number of HSP's successfully gapped: 10 Length of query: 349 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 247 Effective length of database: 11,315,673 Effective search space: 2794971231 Effective search space used: 2794971231 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
