ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf2l21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK241286.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 317 4e-83
2ref|NM_001060104.1| Oryza sativa (japonica cultivar-group) Os04g... 287 4e-74
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 121 5e-24
4emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4,... 121 5e-24
5gb|AY112005.1| Zea mays CL26244_1 mRNA sequence 105 3e-19
6emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome 48 0.064
7emb|Z48053.1|BHV130KB Bovine herpesvirus type 1 (Cooper) DNA (30... 48 0.064
8gb|AC192624.2| Gallus gallus BAC clone CH261-104D15 from chromos... 42 4.0
9ref|NM_001055793.1| Oryza sativa (japonica cultivar-group) Os03g... 42 4.0
10gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete s... 42 4.0
11ref|XR_007356.1| PREDICTED: Rattus norvegicus similar to Cofilin... 42 4.0
12ref|XR_005490.1| PREDICTED: Rattus norvegicus similar to Cofilin... 42 4.0
13gb|BT025098.1| Drosophila melanogaster IP12358 full insert cDNA 42 4.0
14gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete... 42 4.0
15gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 42 4.0
16ref|NM_136670.2| Drosophila melanogaster CG1776-RA (CG1776), mRNA 42 4.0
17gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, compl... 42 4.0
18gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 4.0
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.0
20gb|AY060726.1| Drosophila melanogaster GH17420 full length cDNA 42 4.0
21emb|BX649503.3| Zebrafish DNA sequence from clone DKEYP-90A8 in ... 42 4.0
22emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 42 4.0
23ref|NM_001031442.1| Gallus gallus DTW domain containing 2 (DTWD2... 42 4.0
24gb|AC154764.2| Mus musculus BAC clone RP24-423N7 from chromosome... 42 4.0
25dbj|AK111395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.0
26gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, r... 42 4.0
27emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chr... 42 4.0

>dbj|AK241286.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065137C21,
           full insert sequence
          Length = 1329
 Score =  317 bits (160), Expect = 4e-83
 Identities = 454/552 (82%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagcttggcgggggcacgtggctggggtgcacgaagggagggaaactggccttcctgacc 298
           ||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||
Sbjct: 286 gagctcggcggcggcacgtggctggggtgcacgagggacgggaagctggccttcctgacc 345

                                                                       
Query: 299 aacgtccgggaggccagcccccgggtcgaggcgaggtccagaggggagcttcccgtaagg 358
           |||||||||||| || || | | |||||  || | ||||||||||||||| ||||| |||
Sbjct: 346 aacgtccgggagcccggcacgctggtcggagccaagtccagaggggagctccccgtcagg 405

                                                                       
Query: 359 tttctccagggcaggcagggtccattggagtatgcaactgaaattgcaaaggaagcagat 418
           || |||||||| |  ||  |||| |||||||||||    ||||| || ||||||||||||
Sbjct: 406 ttcctccagggaaaccaatgtccgttggagtatgcggaagaaatagccaaggaagcagat 465

                                                                       
Query: 419 cagtacaatggttttaatcttgtattggccgatgtgcattcaggaaccatggtgtacatc 478
           ||||||||||| ||||| ||||||||||| |||||||| || ||||  ||||  ||||| 
Sbjct: 466 cagtacaatggctttaaccttgtattggctgatgtgcagtcgggaaatatggcttacata 525

                                                                       
Query: 479 tctaataaaccaggtgacgctcctgtggttcaaacagtttctcctgggtgtcatgtgctt 538
           ||||||| ||| |  |  | ||| |||||||| | ||||   |||||||  |||||||||
Sbjct: 526 tctaatagacctgagggtgatccagtggttcagaaagttctccctgggttccatgtgctt 585

                                                                       
Query: 539 tctaatgctgctattgactccccttggccaaaggtattgcgcttaggacagaacttcaac 598
           || |||||||| ||||||| ||||||||| ||| | |||||||||||||| |  ||||||
Sbjct: 586 tccaatgctgcaattgactgcccttggcctaagatgttgcgcttaggacaaagtttcaac 645

                                                                       
Query: 599 agttttcttgccgcacatgacgatgcagaagtctctttgaagcagatggttgaagaactg 658
           || ||||||||  |||| || | ||| |||||||||||  | ||||||||||||||  ||
Sbjct: 646 agatttcttgcaacacaggatggtgcggaagtctctttacaacagatggttgaagagttg 705

                                                                       
Query: 659 atgacggatacggtcaaggctgacagatctgcggtgcctgacactggcgtggatcctgac 718
           |||| |||| | ||||||||||| | |||||| ||||| || ||||| || || ||||||
Sbjct: 706 atgatggatcctgtcaaggctgataaatctgcagtgccagatactggtgtcgaccctgac 765

                                                                       
Query: 719 tgggaataccagttgagttctatattcatcgacacggaaaagggacaggcaagatacggg 778
           |||||||||||| | || ||||||||||| ||||| || || ||||||||| |||| || 
Sbjct: 766 tgggaataccagctaagctctatattcattgacactgagaaaggacaggcacgatatgga 825

                       
Query: 779 acacggagcatg 790
           ||||| ||||||
Sbjct: 826 acacgaagcatg 837



 Score = 97.6 bits (49), Expect = 8e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                       
Query: 81  cggccatgtgcatcgcggcgtggacatggcaggctcacccggcgtacggcctgctcctcc 140
           |||| |||||||||||||||||| |||||||| | || || ||| || ||||||||||||
Sbjct: 44  cggcgatgtgcatcgcggcgtgggcatggcagtcccaacctgcgcaccgcctgctcctcc 103

                                    
Query: 141 tcttcaaccgcgacgagtatcactc 165
           ||||||||||||||||||| |||||
Sbjct: 104 tcttcaaccgcgacgagtaccactc 128



to top

>ref|NM_001060104.1| Oryza sativa (japonica cultivar-group) Os04g0564500 (Os04g0564500)
           mRNA, complete cds
          Length = 945

 Score =  287 bits (145), Expect = 4e-74
 Identities = 453/553 (81%), Gaps = 2/553 (0%)
 Strand = Plus / Plus

                                                                       
Query: 239 gagcttggcgggggcacgtggctggggtgcacgaagggagggaaactggccttcctgacc 298
           ||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||
Sbjct: 238 gagctcggcggcggcacgtggctggggtgcacgagggacgggaagctggccttcctgacc 297

                                                                       
Query: 299 aacgtccgggaggccagcccccgggtcg-aggcgaggtccagaggggagcttcccgtaag 357
           |||||||||||| || || | | ||||| |  | | ||| ||||||||||| ||||| ||
Sbjct: 298 aacgtccgggagcccggcacgctggtcggacccaacgtc-agaggggagctccccgtcag 356

                                                                       
Query: 358 gtttctccagggcaggcagggtccattggagtatgcaactgaaattgcaaaggaagcaga 417
           ||| |||||||| |  ||  |||| |||||||||||    ||||| || |||||||||||
Sbjct: 357 gttcctccagggaaaccaatgtccgttggagtatgcggaagaaatagccaaggaagcaga 416

                                                                       
Query: 418 tcagtacaatggttttaatcttgtattggccgatgtgcattcaggaaccatggtgtacat 477
           |||||||||||| ||||| ||||||||||| |||||||| || ||||  ||||  |||||
Sbjct: 417 tcagtacaatggctttaaccttgtattggctgatgtgcagtcgggaaatatggcttacat 476

                                                                       
Query: 478 ctctaataaaccaggtgacgctcctgtggttcaaacagtttctcctgggtgtcatgtgct 537
            ||||||| ||| |  |  | ||| |||||||| | ||||   |||||||  ||||||||
Sbjct: 477 atctaatagacctgagggtgatccagtggttcagaaagttctccctgggttccatgtgct 536

                                                                       
Query: 538 ttctaatgctgctattgactccccttggccaaaggtattgcgcttaggacagaacttcaa 597
           ||| |||||||| ||||||| ||||||||| ||| | |||||||||||||| |  |||||
Sbjct: 537 ttccaatgctgcaattgactgcccttggcctaagatgttgcgcttaggacaaagtttcaa 596

                                                                       
Query: 598 cagttttcttgccgcacatgacgatgcagaagtctctttgaagcagatggttgaagaact 657
           ||| ||||||||  |||| || | ||| |||||||||||  | ||||||||||||||  |
Sbjct: 597 cagatttcttgcaacacaggatggtgcggaagtctctttacaacagatggttgaagagtt 656

                                                                       
Query: 658 gatgacggatacggtcaaggctgacagatctgcggtgcctgacactggcgtggatcctga 717
           ||||| |||| | ||||||||||| | |||||| ||||| || ||||| || || |||||
Sbjct: 657 gatgatggatcctgtcaaggctgataaatctgcagtgccagatactggtgtcgaccctga 716

                                                                       
Query: 718 ctgggaataccagttgagttctatattcatcgacacggaaaagggacaggcaagatacgg 777
           ||||||||||||| | || ||||||||||| ||||| || || ||||||||| |||| ||
Sbjct: 717 ctgggaataccagctaagctctatattcattgacactgagaaaggacaggcacgatatgg 776

                        
Query: 778 gacacggagcatg 790
            ||||| ||||||
Sbjct: 777 aacacgaagcatg 789



 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 86  atgtgcatcgcggcgtggacatggcaggctcacccggcgtacggcctgctcctcctcttc 145
           |||||||||||||||||| |||||||| | || || ||| || |||||||||||||||||
Sbjct: 1   atgtgcatcgcggcgtgggcatggcagtcccaacctgcgcaccgcctgctcctcctcttc 60

                               
Query: 146 aaccgcgacgagtatcactc 165
           |||||||||||||| |||||
Sbjct: 61  aaccgcgacgagtaccactc 80



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  121 bits (61), Expect = 5e-24
 Identities = 160/193 (82%)
 Strand = Plus / Plus

                                                                            
Query: 575      ttgcgcttaggacagaacttcaacagttttcttgccgcacatgacgatgcagaagtctct 634
                |||||||||||||| |  |||||||| ||||||||  |||| || | ||| |||||||||
Sbjct: 28264750 ttgcgcttaggacaaagtttcaacagatttcttgcaacacaggatggtgcggaagtctct 28264809

                                                                            
Query: 635      ttgaagcagatggttgaagaactgatgacggatacggtcaaggctgacagatctgcggtg 694
                ||  | ||||||||||||||  |||||| |||| | ||||||||||| | |||||| |||
Sbjct: 28264810 ttacaacagatggttgaagagttgatgatggatcctgtcaaggctgataaatctgcagtg 28264869

                                                                            
Query: 695      cctgacactggcgtggatcctgactgggaataccagttgagttctatattcatcgacacg 754
                || || ||||| || || |||||||||||||||||| | || ||||||||||| ||||| 
Sbjct: 28264870 ccagatactggtgtcgaccctgactgggaataccagctaagctctatattcattgacact 28264929

                             
Query: 755      gaaaagggacagg 767
                || || |||||||
Sbjct: 28264930 gagaaaggacagg 28264942



 Score =  105 bits (53), Expect = 3e-19
 Identities = 146/177 (82%)
 Strand = Plus / Plus

                                                                            
Query: 398      gaaattgcaaaggaagcagatcagtacaatggttttaatcttgtattggccgatgtgcat 457
                ||||| || ||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 28264293 gaaatagccaaggaagcagatcagtacaatggctttaaccttgtattggctgatgtgcag 28264352

                                                                            
Query: 458      tcaggaaccatggtgtacatctctaataaaccaggtgacgctcctgtggttcaaacagtt 517
                || ||||  ||||  ||||| ||||||| ||| |  |  | ||| |||||||| | ||||
Sbjct: 28264353 tcgggaaatatggcttacatatctaatagacctgagggtgatccagtggttcagaaagtt 28264412

                                                                         
Query: 518      tctcctgggtgtcatgtgctttctaatgctgctattgactccccttggccaaaggta 574
                   |||||||  ||||||||||| |||||||| ||||||| ||||||||| ||||||
Sbjct: 28264413 ctccctgggttccatgtgctttccaatgctgcaattgactgcccttggcctaaggta 28264469



 Score = 97.6 bits (49), Expect = 8e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                            
Query: 81       cggccatgtgcatcgcggcgtggacatggcaggctcacccggcgtacggcctgctcctcc 140
                |||| |||||||||||||||||| |||||||| | || || ||| || ||||||||||||
Sbjct: 28263424 cggcgatgtgcatcgcggcgtgggcatggcagtcccaacctgcgcaccgcctgctcctcc 28263483

                                         
Query: 141      tcttcaaccgcgacgagtatcactc 165
                ||||||||||||||||||| |||||
Sbjct: 28263484 tcttcaaccgcgacgagtaccactc 28263508



 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                            
Query: 239      gagcttggcgggggcacgtggctggggtgcacgaagggagggaaactggccttcctgacc 298
                ||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||
Sbjct: 28263666 gagctcggcggcggcacgtggctggggtgcacgagggacgggaagctggccttcctgacc 28263725

                            
Query: 299      aacgtccgggag 310
                ||||||||||||
Sbjct: 28263726 aacgtccgggag 28263737



to top

>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10,
             complete sequence
          Length = 150957

 Score =  121 bits (61), Expect = 5e-24
 Identities = 160/193 (82%)
 Strand = Plus / Plus

                                                                         
Query: 575   ttgcgcttaggacagaacttcaacagttttcttgccgcacatgacgatgcagaagtctct 634
             |||||||||||||| |  |||||||| ||||||||  |||| || | ||| |||||||||
Sbjct: 57058 ttgcgcttaggacaaagtttcaacagatttcttgcaacacaggatggtgcggaagtctct 57117

                                                                         
Query: 635   ttgaagcagatggttgaagaactgatgacggatacggtcaaggctgacagatctgcggtg 694
             ||  | ||||||||||||||  |||||| |||| | ||||||||||| | |||||| |||
Sbjct: 57118 ttacaacagatggttgaagagttgatgatggatcctgtcaaggctgataaatctgcagtg 57177

                                                                         
Query: 695   cctgacactggcgtggatcctgactgggaataccagttgagttctatattcatcgacacg 754
             || || ||||| || || |||||||||||||||||| | || ||||||||||| ||||| 
Sbjct: 57178 ccagatactggtgtcgaccctgactgggaataccagctaagctctatattcattgacact 57237

                          
Query: 755   gaaaagggacagg 767
             || || |||||||
Sbjct: 57238 gagaaaggacagg 57250



 Score =  105 bits (53), Expect = 3e-19
 Identities = 146/177 (82%)
 Strand = Plus / Plus

                                                                         
Query: 398   gaaattgcaaaggaagcagatcagtacaatggttttaatcttgtattggccgatgtgcat 457
             ||||| || ||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 56601 gaaatagccaaggaagcagatcagtacaatggctttaaccttgtattggctgatgtgcag 56660

                                                                         
Query: 458   tcaggaaccatggtgtacatctctaataaaccaggtgacgctcctgtggttcaaacagtt 517
             || ||||  ||||  ||||| ||||||| ||| |  |  | ||| |||||||| | ||||
Sbjct: 56661 tcgggaaatatggcttacatatctaatagacctgagggtgatccagtggttcagaaagtt 56720

                                                                      
Query: 518   tctcctgggtgtcatgtgctttctaatgctgctattgactccccttggccaaaggta 574
                |||||||  ||||||||||| |||||||| ||||||| ||||||||| ||||||
Sbjct: 56721 ctccctgggttccatgtgctttccaatgctgcaattgactgcccttggcctaaggta 56777



 Score = 97.6 bits (49), Expect = 8e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                         
Query: 81    cggccatgtgcatcgcggcgtggacatggcaggctcacccggcgtacggcctgctcctcc 140
             |||| |||||||||||||||||| |||||||| | || || ||| || ||||||||||||
Sbjct: 55732 cggcgatgtgcatcgcggcgtgggcatggcagtcccaacctgcgcaccgcctgctcctcc 55791

                                      
Query: 141   tcttcaaccgcgacgagtatcactc 165
             ||||||||||||||||||| |||||
Sbjct: 55792 tcttcaaccgcgacgagtaccactc 55816



 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                         
Query: 239   gagcttggcgggggcacgtggctggggtgcacgaagggagggaaactggccttcctgacc 298
             ||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||
Sbjct: 55974 gagctcggcggcggcacgtggctggggtgcacgagggacgggaagctggccttcctgacc 56033

                         
Query: 299   aacgtccgggag 310
             ||||||||||||
Sbjct: 56034 aacgtccgggag 56045



to top

>gb|AY112005.1| Zea mays CL26244_1 mRNA sequence
          Length = 618

 Score =  105 bits (53), Expect = 3e-19
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                       
Query: 473 tacatctctaataaaccaggtgacgctcctgtggttcaaacagtttctcctgggtgtcat 532
           ||||||||||||| ||| || | || ||||||| ||||||||||| ||||||||  ||||
Sbjct: 614 tacatctctaatagacccggaggcgatcctgtgattcaaacagttgctcctgggcttcat 555

                                                                
Query: 533 gtgctttctaatgctgctattgactccccttggccaaaggtattgcgcttagg 585
           |||||||| |||||||| ||| | |||||||||||||||| | ||||||||||
Sbjct: 554 gtgctttcgaatgctgcaattaattccccttggccaaaggcaatgcgcttagg 502



 Score = 50.1 bits (25), Expect = 0.016
 Identities = 217/281 (77%)
 Strand = Plus / Minus

                                                                       
Query: 620 gatgcagaagtctctttgaagcagatggttgaagaactgatgacggatacggtcaaggct 679
           |||||||||| |||||| || || ||||| |||||  |||||| |||||| | ||   ||
Sbjct: 467 gatgcagaagcctctttaaaacaaatggtagaagagttgatgatggatactgccagacct 408

                                                                       
Query: 680 gacagatctgcggtgcctgacactggcgtggatcctgactgggaataccagttgagttct 739
           || ||||||  |||||||||||| ||||  || ||||| ||||| | | || | || || 
Sbjct: 407 gatagatctatggtgcctgacaccggcgccgaccctgagtgggagtccaagctaagctca 348

                                                                       
Query: 740 atattcatcgacacggaaaagggacaggcaagatacgggacacggagcatggccgccatc 799
           |||||||| ||| | | ||||| ||||||  |||| || ||||| |||||||  ||  | 
Sbjct: 347 atattcattgaccctgcaaaggaacaggcccgatatggaacacgaagcatggtggcgcta 288

                                                                       
Query: 800 ggggtgaaactggatggtgaggtaactttctacgagaggtccttggccagcagcttgtgg 859
           |  | |||| |||| ||||||||||| ||||| || |||| |||||  | ||| ||||||
Sbjct: 287 gcagcgaaattggaaggtgaggtaacattctatgaaaggtacttggagaacagtttgtgg 228

                                                    
Query: 860 aatgagaatctagtacagtttcgaatggagatggcacaata 900
           || ||||||||  ||||||| |  ||||||| ||| |||||
Sbjct: 227 aaggagaatctcatacagttccagatggagaaggcccaata 187



to top

>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 48.1 bits (24), Expect = 0.064
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 192   gggccgccgcgggggaggagggcg 215
             ||||||||||||||||||||||||
Sbjct: 84321 gggccgccgcgggggaggagggcg 84344



to top

>emb|Z48053.1|BHV130KB Bovine herpesvirus type 1 (Cooper) DNA (30 kb)
          Length = 30000

 Score = 48.1 bits (24), Expect = 0.064
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 192   gggccgccgcgggggaggagggcg 215
             ||||||||||||||||||||||||
Sbjct: 17422 gggccgccgcgggggaggagggcg 17445



to top

>gb|AC192624.2| Gallus gallus BAC clone CH261-104D15 from chromosome z, complete
             sequence
          Length = 224359

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   ccgcgggggaggagggcgagg 218
             |||||||||||||||||||||
Sbjct: 89287 ccgcgggggaggagggcgagg 89267



to top

>ref|NM_001055793.1| Oryza sativa (japonica cultivar-group) Os03g0195500 (Os03g0195500)
           mRNA, complete cds
          Length = 1430

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 120 cggcgtacggcctgctcctcc 140
           |||||||||||||||||||||
Sbjct: 560 cggcgtacggcctgctcctcc 540



to top

>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence
          Length = 21146708

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 836     aggtccttggccagcagcttg 856
               |||||||||||||||||||||
Sbjct: 5607327 aggtccttggccagcagcttg 5607347



to top

>ref|XR_007356.1| PREDICTED: Rattus norvegicus similar to Cofilin-1 (Cofilin,
           non-muscle isoform) (LOC293567), mRNA
          Length = 734

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 205 ggaggagggcgaggagatcct 225
           |||||||||||||||||||||
Sbjct: 228 ggaggagggcgaggagatcct 248



to top

>ref|XR_005490.1| PREDICTED: Rattus norvegicus similar to Cofilin-1 (Cofilin,
           non-muscle isoform) (LOC293567), mRNA
          Length = 734

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 205 ggaggagggcgaggagatcct 225
           |||||||||||||||||||||
Sbjct: 228 ggaggagggcgaggagatcct 248



to top

>gb|BT025098.1| Drosophila melanogaster IP12358 full insert cDNA
          Length = 2067

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 836 aggtccttggccagcagcttg 856
           |||||||||||||||||||||
Sbjct: 656 aggtccttggccagcagcttg 636



to top

>gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete sequence
          Length = 188872

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 836    aggtccttggccagcagcttg 856
              |||||||||||||||||||||
Sbjct: 115312 aggtccttggccagcagcttg 115332



to top

>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0064E16, complete sequence
          Length = 159092

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   cggcgtacggcctgctcctcc 140
             |||||||||||||||||||||
Sbjct: 68375 cggcgtacggcctgctcctcc 68355



to top

>ref|NM_136670.2| Drosophila melanogaster CG1776-RA (CG1776), mRNA
          Length = 2075

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 836  aggtccttggccagcagcttg 856
            |||||||||||||||||||||
Sbjct: 1197 aggtccttggccagcagcttg 1177



to top

>gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, complete sequence
          Length = 188276

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 259    gctggggtgcacgaagggagggaaa 283
              ||||||| |||||||||||||||||
Sbjct: 113438 gctggggagcacgaagggagggaaa 113414



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 164     tccaggccgacgcggccagcg 184
               |||||||||||||||||||||
Sbjct: 2101216 tccaggccgacgcggccagcg 2101236



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 120     cggcgtacggcctgctcctcc 140
               |||||||||||||||||||||
Sbjct: 4926387 cggcgtacggcctgctcctcc 4926407



to top

>gb|AY060726.1| Drosophila melanogaster GH17420 full length cDNA
          Length = 2057

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 836  aggtccttggccagcagcttg 856
            |||||||||||||||||||||
Sbjct: 1179 aggtccttggccagcagcttg 1159



to top

>emb|BX649503.3| Zebrafish DNA sequence from clone DKEYP-90A8 in linkage group 4,
             complete sequence
          Length = 189355

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   tacaatggttttaatcttgta 442
             |||||||||||||||||||||
Sbjct: 92337 tacaatggttttaatcttgta 92317



to top

>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 319   ccgggtcgaggcgaggtccag 339
             |||||||||||||||||||||
Sbjct: 51836 ccgggtcgaggcgaggtccag 51816



to top

>ref|NM_001031442.1| Gallus gallus DTW domain containing 2 (DTWD2), mRNA
 emb|AJ719497.1| Gallus gallus mRNA for hypothetical protein, clone 2n22
          Length = 4179

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 198 ccgcgggggaggagggcgagg 218
           |||||||||||||||||||||
Sbjct: 69  ccgcgggggaggagggcgagg 89



to top

>gb|AC154764.2| Mus musculus BAC clone RP24-423N7 from chromosome 16, complete
            sequence
          Length = 159556

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 401  attgcaaaggaagcagatcagtaca 425
            |||||||||||||||||| ||||||
Sbjct: 2613 attgcaaaggaagcagataagtaca 2637



to top

>dbj|AK111395.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-D04, full
           insert sequence
          Length = 1430

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 120 cggcgtacggcctgctcctcc 140
           |||||||||||||||||||||
Sbjct: 560 cggcgtacggcctgctcctcc 540



to top

>gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, region 46A1-46B2, P1 clones
              DS00050, DS00191, and DS05369, complete sequence
          Length = 196337

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 836    aggtccttggccagcagcttg 856
              |||||||||||||||||||||
Sbjct: 110734 aggtccttggccagcagcttg 110754



to top

>emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chromosome 16, complete
              sequence
          Length = 180784

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 401    attgcaaaggaagcagatcagtaca 425
              |||||||||||||||||| ||||||
Sbjct: 166756 attgcaaaggaagcagataagtaca 166780


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 165,513,669
Number of extensions: 8767326
Number of successful extensions: 164308
Number of sequences better than 10.0: 27
Number of HSP's gapped: 164305
Number of HSP's successfully gapped: 41
Length of query: 1047
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1024
Effective length of database: 18,503,978,556
Effective search space: 18948074041344
Effective search space used: 18948074041344
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top