ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf2l06 |
|---|---|
| Clone Library Name | barley_pub |
>Q6NRQ1:B3GL2_XENLA UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Xenopus| laevis (African clawed frog) Length = 486 Score = 51.6 bits (122), Expect = 9e-06 Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 15/190 (7%) Frame = +3 Query: 567 LQKEVDMYHDFLFIDA-DEGTKPPEKMLAYFKAAYDMFHAEFYVKADDTIYXXXXXXXXX 743 LQ+E + D +F++ D P K+L +++ + EF +K DD + Sbjct: 296 LQEESTTFQDIVFVNVVDTYRNVPSKLLNFYRWTVQLTRFEFLLKTDDDCFIDIDNVLKM 355 Query: 744 XXXXXXH-HRTYIGCMKKGPVVSDPNMEWYESSYGLLGNEYFMHASGSLYALSSEVVGAI 920 + G + V D +W E Y L Y A GS Y +S+++V + Sbjct: 356 VAQKELQKENAWWGNFRLNWAV-DRTGKWQELEY--LSPAYPAFACGSGYIISNDIVQWL 412 Query: 921 ATTYNESLRMFDYEDVTVGSWMLAMNVN-HEDNCAMCDSTC----------TPNSI-AVW 1064 A ++ L+ + EDV++G WM A+ + ++D+ +C+ C TP + +W Sbjct: 413 AVN-SQRLKTYQGEDVSMGIWMSAIGPSRYQDSRWLCEKKCEAGMLSSPQYTPQELMEIW 471 Query: 1065 DSK-ACSGSC 1091 K C C Sbjct: 472 QQKERCGNPC 481
>Q5M900:B3GL2_XENTR UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Xenopus| tropicalis (Western clawed frog) (Silurana tropicalis) Length = 488 Score = 51.2 bits (121), Expect = 1e-05 Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 15/190 (7%) Frame = +3 Query: 567 LQKEVDMYHDFLFIDA-DEGTKPPEKMLAYFKAAYDMFHAEFYVKADDTIYXXXXXXXXX 743 LQ+E + D +F+ D P K+L +++ + EF +K DD + Sbjct: 298 LQEESTTFQDIVFVHVVDTYRNVPSKLLNFYQWTAEFTSFEFLLKTDDDCFIDIENVLEK 357 Query: 744 XXXXXXH-HRTYIGCMKKGPVVSDPNMEWYESSYGLLGNEYFMHASGSLYALSSEVVGAI 920 T+ G + V D +W E Y L Y A GS Y +S ++V + Sbjct: 358 IAHKQLQKENTWWGNFRLNWAV-DRTGKWQELEY--LSPAYPAFACGSGYVISQDIVQWL 414 Query: 921 ATTYNESLRMFDYEDVTVGSWMLAMNVN-HEDNCAMCDSTC----------TPNS-IAVW 1064 A+ ++ L+ + EDV++G WM A+ + ++D+ +C+ C TP + +W Sbjct: 415 ASN-SQRLKTYQGEDVSMGIWMSAIGPSRYQDSHWLCEKKCEAGMLSSPQYTPQELLELW 473 Query: 1065 DSK-ACSGSC 1091 K C C Sbjct: 474 QQKERCGNPC 483
>Q8BG28:B3GL2_MOUSE UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Mus| musculus (Mouse) Length = 504 Score = 51.2 bits (121), Expect = 1e-05 Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 14/196 (7%) Frame = +3 Query: 567 LQKEVDMYHDFLFIDA-DEGTKPPEKMLAYFKAAYDMFHAEFYVKADDTIYXXXXXXXXX 743 LQ+E ++ D +F+D D P K+L +++ + + +K DD Y Sbjct: 312 LQEESSVHDDIVFVDVVDTYRNVPAKLLNFYRWTVESTSFDLLLKTDDDCYIDLEAVFNR 371 Query: 744 XXXXXXHHRTYIGCMKKGPVVSDPNMEWYESSYGLLGNEYFMHASGSLYALSSEVVGAIA 923 + + D +W E Y Y A GS Y +S ++V +A Sbjct: 372 IAQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYP--SPAYPAFACGSGYVISKDIVDWLA 429 Query: 924 TTYNESLRMFDYEDVTVGSWMLAMN-VNHEDNCAMCDSTCTPNSIA-----------VWD 1067 + L+ + EDV++G WM A+ H+D+ +C+ TC ++ +W+ Sbjct: 430 GN-SRRLKTYQGEDVSMGIWMAAIGPKRHQDSLWLCEKTCETGMLSSPQYSPEELSKLWE 488 Query: 1068 SK-ACSGSCNPIEKIK 1112 K C C K++ Sbjct: 489 LKELCGDPCQCEAKVR 504
>Q8NCR0:B3GL2_HUMAN UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Homo| sapiens (Human) Length = 500 Score = 49.3 bits (116), Expect = 5e-05 Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 2/165 (1%) Frame = +3 Query: 552 EKMADLQKEVDMYHDFLFIDA-DEGTKPPEKMLAYFKAAYDMFHAEFYVKADDTIYXXXX 728 E+ A L++E +Y D +F+D D P K+L +++ + +K DD Y Sbjct: 305 EEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDLE 364 Query: 729 XXXXXXXXXXXHHRTYIGCMKKGPVVSDPNMEWYESSYGLLGNEYFMHASGSLYALSSEV 908 + + D +W E Y Y A GS Y +S ++ Sbjct: 365 AVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYP--SPAYPAFACGSGYVISKDI 422 Query: 909 VGAIATTYNESLRMFDYEDVTVGSWMLAMN-VNHEDNCAMCDSTC 1040 V +A+ L+ + EDV++G WM A+ ++D+ +C+ TC Sbjct: 423 VKWLASNSGR-LKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTC 466
>Q502B3:B3GL2_DANRE UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 491 Score = 43.9 bits (102), Expect = 0.002 Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 4/181 (2%) Frame = +3 Query: 510 GLSFRFVIGRTKDKEKMADLQKEVDMYHDFLFIDADEGT--KPPEKMLAYFKAAYDMFHA 683 G S R I + K + LQ+E + D +F+D GT P K+L ++K + + Sbjct: 284 GRSGRQKIREAQLKGEDEALQEESLRHGDMVFVDV-VGTYRNVPSKLLQFYKWSVENADF 342 Query: 684 EFYVKADDTIYXXXXXXXXXXXXXXXHHRT-YIGCMKKGPVVSDPNMEWYESSYGLLGNE 860 +K DD + H + + G ++ V D +W E Y Sbjct: 343 SLLLKTDDDCFIDVDAVLMKMQRRRLTHTSLWWGNFRQNWAV-DRVGKWQELEYA--SPA 399 Query: 861 YFMHASGSLYALSSEVVGAIATTYNESLRMFDYEDVTVGSWMLAMNV-NHEDNCAMCDST 1037 Y A GS Y +S ++V +A+ + L+ + EDV++G WM A+ ++D+ +C+ Sbjct: 400 YPAFACGSGYVVSRDLVQWLASNA-QHLKAYQGEDVSMGIWMAAVGPRKYQDSGWLCEKE 458 Query: 1038 C 1040 C Sbjct: 459 C 459
>Q91Z92:B3GT6_MOUSE Beta-1,3-galactosyltransferase 6 - Mus musculus (Mouse)| Length = 325 Score = 41.2 bits (95), Expect = 0.012 Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 6/223 (2%) Frame = +3 Query: 360 SGNHSAGDREKVLAVVGVHTELGSXXXXXXXXXTWFPPNPEGVVSLEHGFGLSFRFVIGR 539 S + +A R K V V + + TW P G + RF +G Sbjct: 40 SASGAARPRAKAFLAVLVASAPRAVERRTAVRSTWLAPERRGGPE-----DVWARFAVGT 94 Query: 540 TK-DKEKMADLQKEVDMYHDFLFIDA--DEGTKPPEKMLAYFKAAYDMFHAEFYVKADDT 710 E+ L+ E + D L + A D K+LA + EF +KADD Sbjct: 95 GGLGSEERRALELEQAQHGDLLLLPALRDAYENLTAKVLAMLTWLDERVDFEFVLKADDD 154 Query: 711 IYXXXXXXXXXXXXXXX--HHRTYIGCMK-KGPVVSDPNMEWYESSYGLLGNEYFMHASG 881 + R Y G +G V P W E+++ L + Y +A G Sbjct: 155 SFARLDAILVDLRAREPARRRRLYWGFFSGRGRV--KPGGRWREAAWQLC-DYYLPYALG 211 Query: 882 SLYALSSEVVGAIATTYNESLRMFDYEDVTVGSWMLAMNVNHE 1010 Y LS+++V + + E LR + EDV++G+W+ ++V E Sbjct: 212 GGYVLSADLVHYLRLS-REYLRAWHSEDVSLGTWLAPVDVQRE 253
>Q96L58:B3GT6_HUMAN Beta-1,3-galactosyltransferase 6 - Homo sapiens (Human)| Length = 329 Score = 40.0 bits (92), Expect = 0.028 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 6/169 (3%) Frame = +3 Query: 522 RFVIGRTK-DKEKMADLQKEVDMYHDFLFIDA--DEGTKPPEKMLAYFKAAYDMFHAEFY 692 RF +G E+ L++E + D L + A D K+LA + EF Sbjct: 93 RFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLTAKVLAMLAWLDEHVAFEFV 152 Query: 693 VKADDTIYXXXXXXXXXXXXXXX--HHRTYIGCMK-KGPVVSDPNMEWYESSYGLLGNEY 863 +KADD + R Y G +G V P W E+++ L + Y Sbjct: 153 LKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRV--KPGGRWREAAWQLC-DYY 209 Query: 864 FMHASGSLYALSSEVVGAIATTYNESLRMFDYEDVTVGSWMLAMNVNHE 1010 +A G Y LS+++V + + + LR + EDV++G+W+ ++V E Sbjct: 210 LPYALGGGYVLSADLVHYLRLS-RDYLRAWHSEDVSLGAWLAPVDVQRE 257
>Q9N491:SQV2_CAEEL Beta-1,3-galactosyltransferase sqv-2 - Caenorhabditis elegans| Length = 330 Score = 34.3 bits (77), Expect = 1.5 Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 2/174 (1%) Frame = +3 Query: 567 LQKEVDMYHDFLFIDADEGT--KPPEKMLAYFKAAYDMFHAEFYVKADDTIYXXXXXXXX 740 L +E + + D +D E + + +K LA F A+ F +F++K D + Sbjct: 111 LAEENEKFGDLALLDRHEESYERLAKKTLACFVHAFANFKFKFFLKTDIDSFVRITPLII 170 Query: 741 XXXXXXXHHRTYIGCMKKGPVVSDPNMEWYESSYGLLGNEYFMHASGSLYALSSEVVGAI 920 Y G + G +W E + L + Y + G Y LS E++ + Sbjct: 171 NLKQIQDP-MLYWGFLD-GRAKPFRKGKWKEPEWNLC-DRYLPYQLGGGYVLSYELIRFL 227 Query: 921 ATTYNESLRMFDYEDVTVGSWMLAMNVNHEDNCAMCDSTCTPNSIAVWDSKACS 1082 A + R + EDV+VG+W+ ++V + + P W S+ C+ Sbjct: 228 AINA-QLFRHYRNEDVSVGAWIGGLDVKYVHD---------PRFDTEWRSRGCN 271
>P97793:ALK_MOUSE ALK tyrosine kinase receptor precursor - Mus musculus (Mouse)| Length = 1621 Score = 33.5 bits (75), Expect = 2.6 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = -1 Query: 427 PSSVWTPTTASTFSLSPAEWFPXXXXXXXXXXXXRPQRKATESGGGWSGTG 275 P+S+W PT S F+ PA+ PQ +A + GGW+G G Sbjct: 1508 PTSLWNPTYGSWFTAKPAK-------KTHPPPGAEPQARAGAAEGGWTGPG 1551
>Q9LK86:FBK71_ARATH Putative F-box/Kelch-repeat protein At3g27910 - Arabidopsis thaliana| (Mouse-ear cress) Length = 312 Score = 32.0 bits (71), Expect = 7.6 Identities = 29/94 (30%), Positives = 44/94 (46%) Frame = -2 Query: 1587 DICAHCIVYIPSTPLE*FSVVNIQALL*FTTSLQLDWVYPTINIQSYTNIVLYIALRFVH 1408 +I +C YIP S+V+ + TS++L+ V ++ T VLY+ALRF H Sbjct: 36 EIIVNCFAYIPRCDYPSLSLVS-KTFNRLITSIELNIVR---SLFQRTENVLYVALRFSH 91 Query: 1407 IVPKHSNF*VAPNKICAYSGIVCRYPPAVRGYNK 1306 + + + CA GIV + GYNK Sbjct: 92 ---EEDPICMRVPRGCAAFGIVDGKIYVIGGYNK 122
>Q6DKN2:OTX2B_XENLA Homeobox protein OTX2-B - Xenopus laevis (African clawed frog)| Length = 289 Score = 31.6 bits (70), Expect = 9.9 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +3 Query: 855 NEYFMHASGSLYALSSEVVGAIATTYNESLRMFDYEDVTVGSWMLAMNVN 1004 N H + S ALSS+ GA + +N + DY+D T SW L N + Sbjct: 225 NAVTSHLNQSQAALSSQAYGASSLGFNSTADCLDYKDQT-ASWKLNFNAD 273 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 263,541,480 Number of extensions: 5822858 Number of successful extensions: 14768 Number of sequences better than 10.0: 11 Number of HSP's gapped: 14758 Number of HSP's successfully gapped: 11 Length of query: 535 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 417 Effective length of database: 68,319,629 Effective search space: 28489285293 Effective search space used: 28489285293 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
