ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5f16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AF302906:Os02g0194100 | 875 | 0.0 | 2 | AK072950:Os11g0538900 | 875 | 0.0 | 3 | AK120755:Os02g0232400 | 107 | 3e-23 | 4 | AK058734:Os02g0232400 | 85 | 2e-16 | 5 | AK110061: | 33 | 0.90 | 6 | Os04g0677700:Os04g0677700 | 32 | 1.2 | 7 | AK058301:Os03g0287700 | 32 | 1.5 | 8 | AK072695:Os03g0826000 | 31 | 2.6 | 9 | AK121549:Os12g0124100 | 30 | 4.5 | 10 | AK105509:Os01g0246700 | 30 | 7.6 | 11 | AK106359:Os01g0201900 | 30 | 7.6 | 12 | AK073519:Os01g0815700 | 30 | 7.6 | 13 | Os11g0157000:Os11g0157000 | 29 | 9.9 | 14 | AY676928:Os01g0246700 | 29 | 9.9 | 15 | Os01g0788700:Os01g0788700 | 29 | 10.0 | 16 | AK119496:Os02g0456000 | 29 | 10.0 |
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>AF302906:Os02g0194100 | Length = 472 Score = 875 bits (2261), Expect = 0.0 Identities = 432/472 (91%), Positives = 448/472 (94%) Frame = +3 Query: 144 MAFFRGLAAVSRLRSRMGQDATTLGGVRWLQMQSASDLDLRSQLQEMIPEQQDRLKKLKS 323 MAFFRGL AVSRLRSR+ Q+ATTLGGVRWLQMQSASDLDL+SQLQE+IPEQQDRLKKLKS Sbjct: 1 MAFFRGLTAVSRLRSRVAQEATTLGGVRWLQMQSASDLDLKSQLQELIPEQQDRLKKLKS 60 Query: 324 EHGKVQLGNITVDMVLGGMRGMTGMLWETSLLDPEEGIRFRGLSIPECQKVLPAAVKDXX 503 EHGKVQLGNITVDMVLGGMRGMTGMLWETSLLDP+EGIRFRGLSIPECQKVLP AVKD Sbjct: 61 EHGKVQLGNITVDMVLGGMRGMTGMLWETSLLDPDEGIRFRGLSIPECQKVLPTAVKDGE 120 Query: 504 XXXXXXXXXXXTGKVPTKEQVDALSKELLSRSTVPGYVYKAIDALPVTAHPMTQFTTGVM 683 TGKVPTKEQVDALSKEL SRS+VPG+VY+AIDALPVTAHPMTQFTTGVM Sbjct: 121 PLPEGLLWLLLTGKVPTKEQVDALSKELASRSSVPGHVYEAIDALPVTAHPMTQFTTGVM 180 Query: 684 ALQVDSEFQKAYDKGMPKTKFWEPTYEDCLNLIARLPQVASYVYRRIFKDGKAIAADNTL 863 ALQV+SEFQKAYDKGM K+KFWEPTYEDCLNLIARLP VASYVYRRIFK GK IAADN L Sbjct: 181 ALQVESEFQKAYDKGMSKSKFWEPTYEDCLNLIARLPAVASYVYRRIFKGGKTIAADNAL 240 Query: 864 DYAANFSHMLGFDDPKMLELMRLYITIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALN 1043 DYAANFSHMLGFDDPKMLELMRLYITIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALN Sbjct: 241 DYAANFSHMLGFDDPKMLELMRLYITIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALN 300 Query: 1044 GLAGPLHGLANQEVLLWIKSVMEETGSNITTDQLKEYVWKTLKSGKVVPGYGHGVLRNTD 1223 GLAGPLHGLANQEVLLWIKSV+ ETGS++TTDQLKEYVWKTLKSGKVVPG+GHGVLR TD Sbjct: 301 GLAGPLHGLANQEVLLWIKSVIGETGSDVTTDQLKEYVWKTLKSGKVVPGFGHGVLRKTD 360 Query: 1224 PRYSCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGL 1403 PRY+CQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGL Sbjct: 361 PRYTCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGL 420 Query: 1404 TEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKVAA 1559 +EARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKVAA Sbjct: 421 SEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKVAA 472
>AK072950:Os11g0538900 | Length = 472 Score = 875 bits (2260), Expect = 0.0 Identities = 429/472 (90%), Positives = 447/472 (94%) Frame = +3 Query: 144 MAFFRGLAAVSRLRSRMGQDATTLGGVRWLQMQSASDLDLRSQLQEMIPEQQDRLKKLKS 323 MAFFRGL AVSR+RSRM Q+ATTLGGVRWLQMQS SDLDL+SQLQE+IPEQQDRLKKLKS Sbjct: 1 MAFFRGLTAVSRIRSRMAQEATTLGGVRWLQMQSPSDLDLKSQLQELIPEQQDRLKKLKS 60 Query: 324 EHGKVQLGNITVDMVLGGMRGMTGMLWETSLLDPEEGIRFRGLSIPECQKVLPAAVKDXX 503 EHGKVQLGNITVDMVLGGMRGM GMLWETSLLDPEEGIRFRGLSIPECQKVLP A+K Sbjct: 61 EHGKVQLGNITVDMVLGGMRGMIGMLWETSLLDPEEGIRFRGLSIPECQKVLPTAIKGGE 120 Query: 504 XXXXXXXXXXXTGKVPTKEQVDALSKELLSRSTVPGYVYKAIDALPVTAHPMTQFTTGVM 683 TGKVPTKEQVDALSKEL++RS+VPG+VYKAIDALPVTAHPMTQFTTGVM Sbjct: 121 PLPEGLLWLLLTGKVPTKEQVDALSKELVTRSSVPGHVYKAIDALPVTAHPMTQFTTGVM 180 Query: 684 ALQVDSEFQKAYDKGMPKTKFWEPTYEDCLNLIARLPQVASYVYRRIFKDGKAIAADNTL 863 ALQV+SEFQKAYDKGMPK+KFWEPTYEDCLNLIARLP VASYVYRRIFKDGK IAADN L Sbjct: 181 ALQVESEFQKAYDKGMPKSKFWEPTYEDCLNLIARLPPVASYVYRRIFKDGKTIAADNAL 240 Query: 864 DYAANFSHMLGFDDPKMLELMRLYITIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALN 1043 DYAANFSHMLGFDDPKMLELMRLY+TIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALN Sbjct: 241 DYAANFSHMLGFDDPKMLELMRLYVTIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALN 300 Query: 1044 GLAGPLHGLANQEVLLWIKSVMEETGSNITTDQLKEYVWKTLKSGKVVPGYGHGVLRNTD 1223 GLAGPLHGLANQEVLLWIKSV+ ETGS++TTDQLKEYVWKTLKSGKVVPG+GHGVLR TD Sbjct: 301 GLAGPLHGLANQEVLLWIKSVIGETGSDVTTDQLKEYVWKTLKSGKVVPGFGHGVLRKTD 360 Query: 1224 PRYSCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGL 1403 PRY+CQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGL Sbjct: 361 PRYTCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGL 420 Query: 1404 TEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKVAA 1559 +EARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKK AA Sbjct: 421 SEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKAAA 472
>AK120755:Os02g0232400 | Length = 539 Score = 107 bits (267), Expect = 3e-23 Identities = 97/390 (24%), Positives = 169/390 (43%), Gaps = 15/390 (3%) Frame = +3 Query: 417 LDPEEGI-RFRGLSIPECQKVLPAAVKDXXXXXXXXXXXXXTGKVPTKEQVDALSKELLS 593 +D +EGI R+RG I E + G +PT+ Q+ + Sbjct: 140 IDGDEGILRYRGYPIEELAE---------SSSFVEVAYLLMYGSLPTQSQLAGWEFAISQ 190 Query: 594 RSTVPGYVYKAIDALPVTAHPMTQFTTGVMALQVDSEFQKAYDKGMPKTKFWEPTYEDCL 773 S VP + I A+P AHPM + + L V +G K + + + Sbjct: 191 HSAVPQGLLDIIQAMPHDAHPMGALASAMSTLSVFHPDANPALRGQDLYKSKQVRDKQIV 250 Query: 774 NLIARLPQVASYVYRRIFKDGKAIAADNTLDYAANFSHMLGF-------DDPKMLELMRL 932 ++ + P +A+ Y R+ I N+L Y+ NF +ML +P++ ++ + Sbjct: 251 RVLGKAPTIAAAAYLRL-AGRPPILPTNSLSYSENFLYMLDSLGDKEYKPNPRLARVLDI 309 Query: 933 YITIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVME 1112 +H +HE +A HL S + D + + + A+ L GPLHG AN+ VL ++ Sbjct: 310 LFILHAEHEMNCSTAAARHLASSGV-DVFTALSGAVGALYGPLHGGANEAVL----KMLN 364 Query: 1113 ETGSNITTDQLKEYVWKTLKSGKVVPGYGHGVLRNTDPRYSCQREFA---LKYLPEDPLF 1283 E GS + + +++ + + G+GH V +N DPR R+ A + DPL Sbjct: 365 EIGS---VENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLI 421 Query: 1284 QLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGLTEARYYTVLFGVSRSIGIGS 1463 ++ L + + + + +PNVD +SG++ G ++ VLF + R G + Sbjct: 422 EVAVALEKAA--LSDDYFVKRKLYPNVDFYSGLIYRAMGF-PTEFFPVLFAIPRMAGWLA 478 Query: 1464 QLIWDRALGLP---LERPKSV-TMEWLENH 1541 W +L P + RP+ V T WL ++ Sbjct: 479 H--WKESLDDPDTKIMRPQQVYTGVWLRHY 506
>AK058734:Os02g0232400 | Length = 284 Score = 85.1 bits (209), Expect = 2e-16 Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 14/264 (5%) Frame = +3 Query: 792 PQVASYVYRRIFKDGKAIAADNTLDYAANFSHMLGF-------DDPKMLELMRLYITIHT 950 P +A+ Y R+ I N+L Y+ NF +ML +P++ ++ + +H Sbjct: 2 PTIAAAAYLRL-AGRPPILPTNSLSYSENFLYMLDSLGDKEYKPNPRLARVLDILFILHA 60 Query: 951 DHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVMEETGSNI 1130 +HE +A HL S + D + + + A+ L GPLHG AN+ VL ++ E GS Sbjct: 61 EHEMNCSTAAARHLASSGV-DVFTALSGAVGALYGPLHGGANEAVL----KMLNEIGS-- 113 Query: 1131 TTDQLKEYVWKTLKSGKVVPGYGHGVLRNTDPRYSCQREFA---LKYLPEDPLFQLVSKL 1301 + + +++ + + G+GH V +N DPR R+ A + DPL ++ L Sbjct: 114 -VENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVAL 172 Query: 1302 YEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGLTEARYYTVLFGVSRSIGIGSQLIWDR 1481 + + + + +PNVD +SG++ G ++ VLF + R G + W Sbjct: 173 EKAA--LSDDYFVKRKLYPNVDFYSGLIYRAMGF-PTEFFPVLFAIPRMAGWLAH--WKE 227 Query: 1482 ALGLP---LERPKSV-TMEWLENH 1541 +L P + RP+ V T WL ++ Sbjct: 228 SLDDPDTKIMRPQQVYTGVWLRHY 251
>AK110061: | Length = 1151 Score = 32.7 bits (73), Expect = 0.90 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +3 Query: 1146 KEYVWKTLKSGKVVPGYGHGVLRNTDPRYSCQ--REFALKYLP 1268 +E+V K K++PG GH + ++P Y Q +EF LK P Sbjct: 1001 REFVDSMRKGNKLIPGIGHKIKSVSNPDYRVQVVKEFVLKNFP 1043
>Os04g0677700:Os04g0677700 | Length = 923 Score = 32.3 bits (72), Expect = 1.2 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%) Frame = -1 Query: 643 TGRASIAL*T*PGTVERLSNSFDRASTCSLVGTFPVKRSQRRPSGKGSPSLTAAGSTFWH 464 TGR S++ + ++ + + G PV + +G GS + T STF Sbjct: 377 TGRLSVS--------QNSDSALKETKSTTSSGLVPVTPQR---AGNGSSTKTVGNSTFAS 425 Query: 463 SGIERPLNRIPSSGSSKDVSQS-IPVIPLIPPRTMS 359 SG + S+ SS + S I V+P+I PRT S Sbjct: 426 SGTNLKRGSLKSNNSSSLQNFSKIDVVPVIIPRTSS 461
>AK058301:Os03g0287700 | Length = 131 Score = 32.0 bits (71), Expect = 1.5 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +1 Query: 79 PRPLRSAHLPLPHACASSVLRPWRSSGAWPRSRDCDPVWDRMPPRLVV 222 PRP R L + S +L PW+S SR C PVW P VV Sbjct: 28 PRPERRLLFDLANTVLSEILAPWKS------SRRCCPVWGPEGPVEVV 69
>AK072695:Os03g0826000 | Length = 758 Score = 31.2 bits (69), Expect = 2.6 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +1 Query: 79 PRPLRSAHLPLPHACASSVLRPWRSSGAWPR-SRDCDPVWDRMPPRLVV 222 PRP R L ++ S +L P + W + SR+C PVW P VV Sbjct: 648 PRPQRRLLFDLANSVLSEILAPCIDTHPWAKLSRNCCPVWGPEGPVEVV 696
>AK121549:Os12g0124100 | Length = 848 Score = 30.4 bits (67), Expect = 4.5 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +3 Query: 213 LGGVRWLQMQSASDLDLRSQLQEMIPEQQDRLKKLKSEHGKVQLGNITVDMVLGGMRGMT 392 + G+R L + + +DL+++ P+ ++ LK + G + N+T+D G G + Sbjct: 646 ISGLRNLNLLTDNDLEIKIIKYVEDPDDAEKAS-LKEKSGIL---NLTLDWSSNGAEGCS 701 Query: 393 GMLWETSLLDPEEGIR-FRGLSIPECQKVL 479 L E LLD E+ +R GL P K L Sbjct: 702 DSLEEEPLLDMEKELRVLNGLEPPSQIKKL 731
>AK105509:Os01g0246700 | Length = 413 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = -3 Query: 281 FLQLGPKIEIGSALHLQPSHTTKRGGI---LSHTGSQSRDRGQAPEERHG 141 FL LGP G +PS+++ G S TG++ ++RG +P+ G Sbjct: 212 FLDLGPSSGAGGEAAEEPSNSSTEAGSPRRSSSTGNKDQERGDSPDAPPG 261
>AK106359:Os01g0201900 | Length = 641 Score = 29.6 bits (65), Expect = 7.6 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -1 Query: 505 GSPSLTAAGSTFWHSGIERPLNRIPSSGSSKDVSQSIPVIP 383 GSPSLT+ GS + +R SS S S P++P Sbjct: 460 GSPSLTSHGSAALRQNLPYVWSRYSDPSSSSTASPSAPILP 500
>AK073519:Os01g0815700 | Length = 950 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = -1 Query: 1384 NTPL*ASTLGHGFFTLPNSVRIGGTTSYNLETSWKSGSSGKYFNANSLW 1238 N P S+ T N+ +SYN ++W S SS +N+NS W Sbjct: 766 NNPYYNSSTWSSNSTYSNNAAWSSNSSYNSNSAWSSNSS---YNSNSAW 811
>Os11g0157000:Os11g0157000 | Length = 2340 Score = 29.3 bits (64), Expect = 9.9 Identities = 16/53 (30%), Positives = 31/53 (58%) Frame = +3 Query: 192 MGQDATTLGGVRWLQMQSASDLDLRSQLQEMIPEQQDRLKKLKSEHGKVQLGN 350 M + + T G V Q + + L+LR L++++ +QD +K +H K++LG+ Sbjct: 1851 MVKSSQTDGQVSDEQDITMNTLELRKNLKDILHNKQDLIKTGACKHDKIKLGS 1903
>AY676928:Os01g0246700 | Length = 580 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = -3 Query: 281 FLQLGPKIEIGSALHLQPSHTTKRGGI---LSHTGSQSRDRGQAPE 153 FL LGP G +PS+++ G S TG++ ++RG +P+ Sbjct: 202 FLDLGPSSGAGGEAAEEPSNSSTEAGSPRRSSSTGNKDQERGDSPD 247
>Os01g0788700:Os01g0788700 | Length = 208 Score = 29.3 bits (64), Expect = 10.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 Query: 220 PPSVVASCPIRDRSLETAARPRKNAMAGA 134 PPS + P ++S+ AARPR +AGA Sbjct: 167 PPSGIEISPTPEQSINAAARPRAAGIAGA 195
>AK119496:Os02g0456000 | Length = 229 Score = 29.3 bits (64), Expect = 10.0 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 541 PVKRSQRRPSGKGSPSLTAAGSTFWHS 461 P R+ PS GSP +T + +TFW S Sbjct: 185 PPPRTTSSPSTPGSPPMTTSAATFWTS 211 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 56,851,105 Number of extensions: 1376356 Number of successful extensions: 3772 Number of sequences better than 10.0: 16 Number of HSP's gapped: 3760 Number of HSP's successfully gapped: 16 Length of query: 626 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 519 Effective length of database: 11,115,468 Effective search space: 5768927892 Effective search space used: 5768927892 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
