ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5e23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK060944:Os12g0506400 | 120 | 1e-27 | 2 | AK068303:Os06g0136500 | 118 | 4e-27 | 3 | AK109356: | 29 | 3.4 | 4 | AK106919:Os01g0819700 | 29 | 3.4 | 5 | AK059227:Os01g0819700 | 29 | 3.4 | 6 | AK106487:Os03g0786500 | 28 | 7.5 | 7 | AK102055:Os02g0708100 | 28 | 7.5 | 8 | AK059653:Os02g0708100 | 28 | 7.5 | 9 | AK059630:Os02g0708100 | 28 | 7.5 | 10 | AK120609:Os07g0520600 | 28 | 9.8 | 11 | AK072131:Os07g0520600 | 28 | 9.8 |
|---|
>AK060944:Os12g0506400 | Length = 149 Score = 120 bits (300), Expect = 1e-27 Identities = 58/109 (53%), Positives = 78/109 (71%) Frame = +3 Query: 147 QLMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNY 326 QL+CL+DLEFDYINP+DSSSRIN VV+ E+ Q L A FLLT HW FL+ AP+ YY+ Sbjct: 25 QLICLSDLEFDYINPYDSSSRINSVVLIEYALQGALCASFLLTLHWFPFLVMAPVAYYHG 84 Query: 327 TLYQRRQHLVDVTEIFNHLSREKKRRLFKIAALTILLFLSLFWMIWSVL 473 LY R+HLVDVTEIF L+ EKK R+ K+A L ++++ ++ + + Sbjct: 85 KLYMDRKHLVDVTEIFRQLNWEKKYRMIKLAFYFSLFIITIYRLVMTAV 133
>AK068303:Os06g0136500 | Length = 83 Score = 118 bits (296), Expect = 4e-27 Identities = 55/62 (88%), Positives = 59/62 (95%) Frame = +3 Query: 147 QLMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNY 326 QLMCLADLEFDYINPFDSSSRINKVV+PEF+ QA LS LFLL+GHWAMFL+SAPMVYYNY Sbjct: 22 QLMCLADLEFDYINPFDSSSRINKVVIPEFVLQAALSVLFLLSGHWAMFLLSAPMVYYNY 81 Query: 327 TL 332 TL Sbjct: 82 TL 83
>AK109356: | Length = 382 Score = 29.3 bits (64), Expect = 3.4 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 9/69 (13%) Frame = +1 Query: 571 PAEHLLRCRYYSYQSLLDKFRVSGDTTQAEGRRQHVRG-------AVC--CLLLVKSPTV 723 P + L R R S S R GD +A GR+ H R VC C +++ P Sbjct: 304 PRDGLRRDRSTSSSSSASSSRPGGDRARAAGRKHHCRAVLGGTPFVVCDKCSEILQLPAA 363 Query: 724 VACNITCKL 750 V+ N +L Sbjct: 364 VSANRAARL 372
>AK106919:Os01g0819700 | Length = 467 Score = 29.3 bits (64), Expect = 3.4 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 9/69 (13%) Frame = +1 Query: 571 PAEHLLRCRYYSYQSLLDKFRVSGDTTQAEGRRQHVRG-------AVC--CLLLVKSPTV 723 P + L R R S S R GD +A GR+ H R VC C +++ P Sbjct: 304 PRDGLRRDRSTSSSSSASSSRPGGDRARAAGRKHHCRAVLGGTPFVVCDKCSEILQLPAA 363 Query: 724 VACNITCKL 750 V+ N +L Sbjct: 364 VSANRAARL 372
>AK059227:Os01g0819700 | Length = 375 Score = 29.3 bits (64), Expect = 3.4 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 9/69 (13%) Frame = +1 Query: 571 PAEHLLRCRYYSYQSLLDKFRVSGDTTQAEGRRQHVRG-------AVC--CLLLVKSPTV 723 P + L R R S S R GD +A GR+ H R VC C +++ P Sbjct: 304 PRDGLRRDRSTSSSSSASSSRPGGDRARAAGRKHHCRAVLGGTPFVVCDKCSEILQLPAA 363 Query: 724 VACNITCKL 750 V+ N +L Sbjct: 364 VSANRAARL 372
>AK106487:Os03g0786500 | Length = 384 Score = 28.1 bits (61), Expect = 7.5 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -1 Query: 148 WKMTR-TMSVTTRKKAASQTKTISLSLAPPGCGSGVGPSRAAAAGE-VSCG 2 WK + T+S ++ SQT LA PG GSG G ++ A G CG Sbjct: 72 WKQQQETLSQARKRPGGSQT------LATPGSGSGSGGAQVARGGACFKCG 116
>AK102055:Os02g0708100 | Length = 410 Score = 28.1 bits (61), Expect = 7.5 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +2 Query: 230 RIYSAGTSKCIIPLNWALGDVLDFCPNGV 316 R+ S G ++P NW +VL+ P+GV Sbjct: 276 RLTSYGCKITVVPANWPASEVLNLKPDGV 304
>AK059653:Os02g0708100 | Length = 216 Score = 28.1 bits (61), Expect = 7.5 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +2 Query: 230 RIYSAGTSKCIIPLNWALGDVLDFCPNGV 316 R+ S G ++P NW +VL+ P+GV Sbjct: 46 RLTSYGCKITVVPANWPASEVLNLKPDGV 74
>AK059630:Os02g0708100 | Length = 473 Score = 28.1 bits (61), Expect = 7.5 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +2 Query: 230 RIYSAGTSKCIIPLNWALGDVLDFCPNGV 316 R+ S G ++P NW +VL+ P+GV Sbjct: 276 RLTSYGCKITVVPANWPASEVLNLKPDGV 304
>AK120609:Os07g0520600 | Length = 183 Score = 27.7 bits (60), Expect = 9.8 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Frame = -1 Query: 259 ALRSACAINSGIT----TLLIREDESNGLI*SNSRSAKHINWKMTRTMS-------VTTR 113 A +ACA+ G T +L+ RE E+ ++ +A ++ R S + R Sbjct: 14 AAAAACAVKVGTTGTIGSLMTRELEAIKAAPPHATAAATTPRRLRRQSSPVSVPCGASPR 73 Query: 112 KKAASQTKTISLSLAPPGCGSGVGPSRAAAAGEVSC 5 K AA + + SLS G GSG R +A +C Sbjct: 74 KIAALRKSSSSLSTTSSGGGSGRRTDRVSAEESSAC 109
>AK072131:Os07g0520600 | Length = 183 Score = 27.7 bits (60), Expect = 9.8 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Frame = -1 Query: 259 ALRSACAINSGIT----TLLIREDESNGLI*SNSRSAKHINWKMTRTMS-------VTTR 113 A +ACA+ G T +L+ RE E+ ++ +A ++ R S + R Sbjct: 14 AAAAACAVKVGTTGTIGSLMTRELEAIKAAPPHATAAATTPRRLRRQSSPVSVPCGASPR 73 Query: 112 KKAASQTKTISLSLAPPGCGSGVGPSRAAAAGEVSC 5 K AA + + SLS G GSG R +A +C Sbjct: 74 KIAALRKSSSSLSTTSSGGGSGRRTDRVSAEESSAC 109 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,651,069 Number of extensions: 560040 Number of successful extensions: 1534 Number of sequences better than 10.0: 11 Number of HSP's gapped: 1531 Number of HSP's successfully gapped: 11 Length of query: 270 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 171 Effective length of database: 11,435,796 Effective search space: 1955521116 Effective search space used: 1955521116 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
