ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5e23 |
|---|---|
| Clone Library Name | barley_pub |
>P53173:ERV14_YEAST ER-derived vesicles protein ERV14 - Saccharomyces cerevisiae| (Baker's yeast) Length = 138 Score = 87.8 bits (216), Expect = 5e-17 Identities = 41/106 (38%), Positives = 63/106 (59%) Frame = +3 Query: 162 ADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYTLYQR 341 ADLE DYINP + S++NK++ PE LS LFLL G+W +FL++ P++ YN Sbjct: 28 ADLEADYINPIELCSKVNKLITPEAALHGALSLLFLLNGYWFVFLLNLPVLAYNLNKIYN 87 Query: 342 RQHLVDVTEIFNHLSREKKRRLFKIAALTILLFLSLFWMIWSVLEE 479 + L+D TEIF L + K+ K+ ++ F L+ MI +++ E Sbjct: 88 KVQLLDATEIFRTLGKHKRESFLKLGFHLLMFFFYLYRMIMALIAE 133
>P38312:ERV15_YEAST ER-derived vesicles protein ERV15 - Saccharomyces cerevisiae| (Baker's yeast) Length = 142 Score = 87.0 bits (214), Expect = 8e-17 Identities = 40/106 (37%), Positives = 65/106 (61%) Frame = +3 Query: 165 DLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYTLYQRR 344 DLE DYIN + R+N++ +PE I QA +SALFL G+W +FL++ P++ YN + ++ Sbjct: 32 DLEADYINSIELCKRVNRLSVPEAILQAFISALFLFNGYWFVFLLNVPVLAYNASKVYKK 91 Query: 345 QHLVDVTEIFNHLSREKKRRLFKIAALTILLFLSLFWMIWSVLEEE 482 HL+D T+IF L R K K+ ++ F + M+ ++LE + Sbjct: 92 THLLDATDIFRKLGRCKIECFLKLGFYLLIFFFYFYRMVTALLEND 137
>O14038:YEY5_SCHPO Uncharacterized protein C2C4.05 - Schizosaccharomyces pombe| (Fission yeast) Length = 134 Score = 81.6 bits (200), Expect = 3e-15 Identities = 39/106 (36%), Positives = 62/106 (58%) Frame = +3 Query: 162 ADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYTLYQR 341 +DL+ D+INP D S ++N V+PE QA + L LL+G W FL++ PM+ +N + Sbjct: 29 SDLKDDFINPIDLSRKLNWYVLPEMGFQAFSALLLLLSGAWITFLLNVPMLAWNAKMIMS 88 Query: 342 RQHLVDVTEIFNHLSREKKRRLFKIAALTILLFLSLFWMIWSVLEE 479 H+ D T IF +S +KR FK+A + F+ LF + +++E Sbjct: 89 NTHMHDSTTIFKDVSSRQKRSFFKLACFAVFFFVYLFLFVSRLVDE 134
>Q3T126:CNIH4_BOVIN Cornichon homolog 4 - Bos taurus (Bovine)| Length = 139 Score = 64.7 bits (156), Expect = 4e-10 Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 6/116 (5%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++ L+DLE DYIN S++NK V+PE + L++ L L++ HW +FL++ P+ +N Sbjct: 24 IITLSDLECDYINARSCCSKLNKWVIPELVGHTLVTVLMLISLHWFIFLLNLPVAAWNIY 83 Query: 330 LY----QRRQHLVDVTEIFN--HLSREKKRRLFKIAALTILLFLSLFWMIWSVLEE 479 Y + D TEI N L K + K+ + F+ L+ MI +++ + Sbjct: 84 RYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIKLGFHLLCFFMYLYSMILALIND 139
>Q5R9M4:CNIH4_PONPY Cornichon homolog 4 - Pongo pygmaeus (Orangutan)| Length = 139 Score = 64.3 bits (155), Expect = 5e-10 Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 6/116 (5%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++ L+DLE DYIN S++NK V+PE I +++ L L++ HW +FL++ P+ +N Sbjct: 24 IITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIY 83 Query: 330 LY----QRRQHLVDVTEIFN--HLSREKKRRLFKIAALTILLFLSLFWMIWSVLEE 479 Y + D TEI N L K + K+ + F+ L+ MI +++ + Sbjct: 84 RYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIKLGFHLLCFFMYLYSMILALIND 139
>Q9P003:CNIH4_HUMAN Cornichon homolog 4 - Homo sapiens (Human)| Length = 139 Score = 64.3 bits (155), Expect = 5e-10 Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 6/116 (5%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++ L+DLE DYIN S++NK V+PE I +++ L L++ HW +FL++ P+ +N Sbjct: 24 IITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIY 83 Query: 330 LY----QRRQHLVDVTEIFN--HLSREKKRRLFKIAALTILLFLSLFWMIWSVLEE 479 Y + D TEI N L K + K+ + F+ L+ MI +++ + Sbjct: 84 RYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIKLGFHLLCFFMYLYSMILALIND 139
>Q9CX13:CNIH4_MOUSE Cornichon homolog 4 - Mus musculus (Mouse)| Length = 139 Score = 62.8 bits (151), Expect = 2e-09 Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 6/116 (5%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++ L+DLE DYIN S++NK V+PE + +++ L L++ HW +FL++ P+ +N Sbjct: 24 IITLSDLECDYINARSCCSKLNKWVIPELVGHTIVTVLMLVSLHWFIFLLNLPVATWNIY 83 Query: 330 LY----QRRQHLVDVTEIFN--HLSREKKRRLFKIAALTILLFLSLFWMIWSVLEE 479 + + D TEI N L K + K+ + F+ L+ MI +++ + Sbjct: 84 RFIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIKLGFYLLCFFMYLYSMILALIND 139
>Q6P3N5:CNIH4_XENTR Cornichon homolog 4 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 139 Score = 61.2 bits (147), Expect = 5e-09 Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 6/116 (5%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++ L+DLE DYIN S++NK V+PE + ++S L L++ HW +F+++ P+ +N Sbjct: 24 IITLSDLECDYINARSCCSKLNKWVVPELVGHTVVSVLMLVSLHWFIFILNLPVAAWNIY 83 Query: 330 LY----QRRQHLVDVTEIFN--HLSREKKRRLFKIAALTILLFLSLFWMIWSVLEE 479 + + D TEI N L K + K+ + F+ L+ MI +++ + Sbjct: 84 RFIMVPSGNLGVFDPTEIHNRGQLKSHMKEAMIKLGFHLLCFFIYLYSMILALIND 139
>P49858:CNI_DROME Protein cornichon - Drosophila melanogaster (Fruit fly)| Length = 144 Score = 58.9 bits (141), Expect = 2e-08 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 7/110 (6%) Frame = +3 Query: 165 DLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYTLYQRR 344 +L+ DY NP D + +N +V+PE++ L+ LFL G W I+ P++ Y+ Y+ R Sbjct: 33 ELKTDYKNPIDQCNSLNPLVLPEYLLHIFLNLLFLFCGEWFSLCINIPLIAYHIWRYKNR 92 Query: 345 -----QHLVDVTEIF--NHLSREKKRRLFKIAALTILLFLSLFWMIWSVL 473 L D T + + L R + K+A I F ++ M++S++ Sbjct: 93 PVMSGPGLYDPTTVLKTDTLYRNMREGWIKLAVYLISFFYYIYGMVYSLI 142
>P52159:CNI_DROVI Protein cornichon - Drosophila virilis (Fruit fly)| Length = 144 Score = 57.8 bits (138), Expect = 5e-08 Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 7/110 (6%) Frame = +3 Query: 165 DLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYTLYQRR 344 +L+ DY NP D + +N +V+PE++ L+ LFL G W ++ P++ Y+ Y+ R Sbjct: 33 ELKTDYKNPIDQCNSLNPLVLPEYLLHLFLNLLFLFCGEWYSLCLNIPLIAYHIWRYKNR 92 Query: 345 -----QHLVDVTEIF--NHLSREKKRRLFKIAALTILLFLSLFWMIWSVL 473 L D T + + L R + K+A I F ++ M++S++ Sbjct: 93 PLMSGPGLYDPTTVLKTDTLFRNLREGWIKLAVYLISFFYYIYGMVYSLI 142
>Q22361:YFR3_CAEEL Uncharacterized protein T09E8.3 - Caenorhabditis elegans| Length = 145 Score = 53.1 bits (126), Expect = 1e-06 Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 7/115 (6%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++C+ +L DY NP + +N++++PE+I + LF+ + L + P+ +Y+ Sbjct: 28 VICVDELRTDYKNPIEQCRNLNQLILPEYIIHGTFTVLFIFSWQLISILANLPLAFYHIY 87 Query: 330 LYQRR-----QHLVDVTEIFNHLSREKKRRL--FKIAALTILLFLSLFWMIWSVL 473 Y +R + D T I N + R+ K+A + F L+ MI++++ Sbjct: 88 TYAKRPVMSGPGIYDPTTILNRSTLSSTLRISWIKLAFYLVSFFYYLYAMIYTLV 142
>Q5RDB5:CNIH_PONPY Cornichon homolog - Pongo pygmaeus (Orangutan)| Length = 144 Score = 50.8 bits (120), Expect = 6e-06 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++ +L+ DY NP D + +N +V+PE++ A +FL W ++ P++ Y+ Sbjct: 28 IIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIW 87 Query: 330 LYQRR-----QHLVDVTEIFNH--LSREKKRRLFKIAALTILLFLSLFWMIW 464 Y R L D T I N L+ +K K+A + F L+ MI+ Sbjct: 88 RYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKLAFYLLAFFYYLYGMIY 139
>O35372:CNIH_MOUSE Cornichon homolog - Mus musculus (Mouse)| Length = 144 Score = 50.8 bits (120), Expect = 6e-06 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++ +L+ DY NP D + +N +V+PE++ A +FL W ++ P++ Y+ Sbjct: 28 IIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIW 87 Query: 330 LYQRR-----QHLVDVTEIFNH--LSREKKRRLFKIAALTILLFLSLFWMIW 464 Y R L D T I N L+ +K K+A + F L+ MI+ Sbjct: 88 RYMSRPVMSAPGLYDPTTIMNADILAYCQKEGWCKLAFYLLAFFYYLYGMIY 139
>O95406:CNIH_HUMAN Cornichon homolog - Homo sapiens (Human)| Length = 144 Score = 50.8 bits (120), Expect = 6e-06 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++ +L+ DY NP D + +N +V+PE++ A +FL W ++ P++ Y+ Sbjct: 28 IIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIW 87 Query: 330 LYQRR-----QHLVDVTEIFNH--LSREKKRRLFKIAALTILLFLSLFWMIW 464 Y R L D T I N L+ +K K+A + F L+ MI+ Sbjct: 88 RYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKLAFYLLAFFYYLYGMIY 139
>Q5BIN6:CNIH_BOVIN Cornichon homolog - Bos taurus (Bovine)| Length = 144 Score = 50.8 bits (120), Expect = 6e-06 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSRINKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYT 329 ++ +L+ DY NP D + +N +V+PE++ A +FL W ++ P++ Y+ Sbjct: 28 IIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIW 87 Query: 330 LYQRR-----QHLVDVTEIFNH--LSREKKRRLFKIAALTILLFLSLFWMIW 464 Y R L D T I N L+ +K K+A + F L+ MI+ Sbjct: 88 RYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKLAFYLLAFFYYLYGMIY 139
>Q5BJU5:CNIH2_RAT Cornichon homolog 2 - Rattus norvegicus (Rat)| Length = 160 Score = 37.4 bits (85), Expect = 0.070 Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 23/131 (17%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSR----------------INKVVMPEFIAQALLSALFLLTGH 281 ++ +L D+ NP D + + K+V+PE+ L +FL Sbjct: 28 IIAFDELRTDFKNPIDQGNPARARERLKNIERICCLLRKLVVPEYSIHGLFCLMFLCAAE 87 Query: 282 WAMFLISAPMVYYNYTLYQRR-----QHLVDVTEIFNH--LSREKKRRLFKIAALTILLF 440 W ++ P+++Y+ Y R + + D I N L+ +K K+A + F Sbjct: 88 WVTLGLNIPLLFYHLWRYFHRPADGSEVMYDAVSIMNADILNYCQKESWCKLAFYLLSFF 147 Query: 441 LSLFWMIWSVL 473 L+ M+++++ Sbjct: 148 YYLYSMVYTLV 158
>O35089:CNIH2_MOUSE Cornichon homolog 2 - Mus musculus (Mouse)| Length = 160 Score = 37.4 bits (85), Expect = 0.070 Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 23/131 (17%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSR----------------INKVVMPEFIAQALLSALFLLTGH 281 ++ +L D+ NP D + + K+V+PE+ L +FL Sbjct: 28 IIAFDELRTDFKNPIDQGNPARARERLKNIERICCLLRKLVVPEYSIHGLFCLMFLCAAE 87 Query: 282 WAMFLISAPMVYYNYTLYQRR-----QHLVDVTEIFNH--LSREKKRRLFKIAALTILLF 440 W ++ P+++Y+ Y R + + D I N L+ +K K+A + F Sbjct: 88 WVTLGLNIPLLFYHLWRYFHRPADGSEVMYDAVSIMNADILNYCQKESWCKLAFYLLSFF 147 Query: 441 LSLFWMIWSVL 473 L+ M+++++ Sbjct: 148 YYLYSMVYTLV 158
>Q6PI25:CNIH2_HUMAN Cornichon homolog 2 - Homo sapiens (Human)| Length = 160 Score = 37.4 bits (85), Expect = 0.070 Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 23/131 (17%) Frame = +3 Query: 150 LMCLADLEFDYINPFDSSSR----------------INKVVMPEFIAQALLSALFLLTGH 281 ++ +L D+ NP D + + K+V+PE+ L +FL Sbjct: 28 IIAFDELRTDFKNPIDQGNPARARERLKNIERICCLLRKLVVPEYSIHGLFCLMFLCAAE 87 Query: 282 WAMFLISAPMVYYNYTLYQRR-----QHLVDVTEIFNH--LSREKKRRLFKIAALTILLF 440 W ++ P+++Y+ Y R + + D I N L+ +K K+A + F Sbjct: 88 WVTLGLNIPLLFYHLWRYFHRPADGSEVMYDAVSIMNADILNYCQKESWCKLAFYLLSFF 147 Query: 441 LSLFWMIWSVL 473 L+ M+++++ Sbjct: 148 YYLYSMVYTLV 158
>Q6ZWS4:CNIH3_MOUSE Cornichon homolog 3 - Mus musculus (Mouse)| Length = 160 Score = 35.0 bits (79), Expect = 0.35 Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 7/95 (7%) Frame = +3 Query: 210 INKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYTLY-----QRRQHLVDVTEIF 374 + K+V+PE+ +L +FL W ++ P+++Y++ Y + D + Sbjct: 64 LRKLVLPEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDPPVVM 123 Query: 375 N--HLSREKKRRLFKIAALTILLFLSLFWMIWSVL 473 N LS +K K+A + F L+ MI++++ Sbjct: 124 NADTLSYCQKEAWCKLAFYLLSFFYYLYCMIYTLV 158
>Q8TBE1:CNIH3_HUMAN Cornichon homolog 3 - Homo sapiens (Human)| Length = 160 Score = 35.0 bits (79), Expect = 0.35 Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 7/95 (7%) Frame = +3 Query: 210 INKVVMPEFIAQALLSALFLLTGHWAMFLISAPMVYYNYTLY-----QRRQHLVDVTEIF 374 + K+V+PE+ +L +FL W ++ P+++Y++ Y + D + Sbjct: 64 LRKLVLPEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDPPVVM 123 Query: 375 N--HLSREKKRRLFKIAALTILLFLSLFWMIWSVL 473 N LS +K K+A + F L+ MI++++ Sbjct: 124 NADTLSYCQKEAWCKLAFYLLSFFYYLYCMIYTLV 158 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 139,484,739 Number of extensions: 3023284 Number of successful extensions: 7427 Number of sequences better than 10.0: 20 Number of HSP's gapped: 7421 Number of HSP's successfully gapped: 20 Length of query: 270 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 159 Effective length of database: 70,239,694 Effective search space: 11168111346 Effective search space used: 11168111346 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
