| Clone Name | FLbaf5e23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT829434.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA125P02, full insert sequence Length = 1033 Score = 317 bits (160), Expect = 3e-83 Identities = 357/422 (84%), Gaps = 3/422 (0%) Strand = Plus / Plus Query: 81 gagatggtcttcgtctggctcgccgccttcttcctcgtcgtcacgctcatcgtcctcgtc 140 |||||||| ||||| |||||| |||| ||||||||||||||| |||||||||| |||||| Sbjct: 199 gagatggttttcgtgtggctcaccgcgttcttcctcgtcgtcgcgctcatcgtgctcgtc 258 Query: 141 atcttccagttgatgtgcttggcagacctggagttcgattatatcaacccgtttgattca 200 |||| |||| |||||||||||||||| |||||||| || |||||||| || || |||||| Sbjct: 259 atctaccagctgatgtgcttggcagatctggagtttgactatatcaatccattcgattca 318 Query: 201 tcctctcgaatcaataaagtggttatgccagaatttatagcgcaggcacttctaagtgca 260 ||||| || || |||||||||||||| |||||||| || ||| ||| |||||||| | Sbjct: 319 tcctcccggataaataaagtggttattccagaattcgtattgcaagcagctctaagtgta 378 Query: 261 ttattcctcttaactgggcattgggcgatgttcttgatttctgccccaatggtgtactat 320 ||||||||| || | ||||||||||| |||||||| |||||||||| |||||||||||| Sbjct: 379 ttattcctcctatcggggcattgggcaatgttcttactttctgccccgatggtgtactat 438 Query: 321 aattatacattataccagcggcggcagcatcttgtagatgtgacagagatatttaaccat 380 || ||||| | |||||||| || || |||||||||||||| ||||| |||||||| ||| Sbjct: 439 aactatacgctgtaccagcgacgacaacatcttgtagatgtaacagaaatatttaatcat 498 Query: 381 ctttcacgggagaagaagcgtcgtctttttaagatagctgctcttaccatcctcctattc 440 ||| ||||||||||| || || ||||||||||||| || ||| | || ||||||||| Sbjct: 499 cttggccgggagaagaaacgccgcctttttaagatagttggtctcattattctcctattc 558 Query: 441 ttgtccttattctggatgatttggagtg---tactggaggaggaagagtagaatgagaaa 497 |||||||| || |||||||| |||| || || |||||||||| ||||||||||| ||| Sbjct: 559 ttgtccttgttttggatgatctggactgtattattggaggaggatgagtagaatgaaaaa 618 Query: 498 aa 499 || Sbjct: 619 aa 620
>ref|NM_001063261.1| Oryza sativa (japonica cultivar-group) Os06g0136500 (Os06g0136500) mRNA, complete cds Length = 2981 Score = 214 bits (108), Expect = 4e-52 Identities = 213/248 (85%) Strand = Plus / Plus Query: 81 gagatggtcttcgtctggctcgccgccttcttcctcgtcgtcacgctcatcgtcctcgtc 140 |||||||| ||||| |||||| |||| |||||||||||||| |||||||||| |||||| Sbjct: 208 gagatggttttcgtgtggctcaccgcgttcttcctcgtcgtggcgctcatcgtgctcgtc 267 Query: 141 atcttccagttgatgtgcttggcagacctggagttcgattatatcaacccgtttgattca 200 |||| |||| |||||||||||||||| |||||||| || |||||||| || || |||||| Sbjct: 268 atctaccagctgatgtgcttggcagatctggagtttgactatatcaatccattcgattca 327 Query: 201 tcctctcgaatcaataaagtggttatgccagaatttatagcgcaggcacttctaagtgca 260 ||||| || || |||||||||||||| |||||||| || ||| ||| |||||||| | Sbjct: 328 tcctcccggataaataaagtggttattccagaattcgtattgcaagcagctctaagtgta 387 Query: 261 ttattcctcttaactgggcattgggcgatgttcttgatttctgccccaatggtgtactat 320 ||||||||| || | ||||||||||| |||||||| |||||||||| |||||||||||| Sbjct: 388 ttattcctcctatcggggcattgggcaatgttcttactttctgccccgatggtgtactat 447 Query: 321 aattatac 328 || ||||| Sbjct: 448 aactatac 455 Score = 111 bits (56), Expect = 4e-21 Identities = 142/170 (83%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 333 taccagcggcggcagcatcttgtagatgtgacagagatatttaaccatctttcacgggag 392 |||||||| || || |||||||||||||| ||||| |||||||| |||||| |||||| Sbjct: 2419 taccagcgacgacaacatcttgtagatgtaacagaaatatttaatcatcttggccgggag 2478 Query: 393 aagaagcgtcgtctttttaagatagctgctcttaccatcctcctattcttgtccttattc 452 ||||| || || ||||||||||||| || ||| | || ||||||||||||||||| || Sbjct: 2479 aagaaacgccgcctttttaagatagttggtctcattattctcctattcttgtccttgttt 2538 Query: 453 tggatgatttggagtg---tactggaggaggaagagtagaatgagaaaaa 499 |||||||| |||| || || |||||||||| ||||||||||| ||||| Sbjct: 2539 tggatgatctggactgtattattggaggaggatgagtagaatgaaaaaaa 2588
>dbj|AK068303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146K07, full insert sequence Length = 2983 Score = 214 bits (108), Expect = 4e-52 Identities = 213/248 (85%) Strand = Plus / Plus Query: 81 gagatggtcttcgtctggctcgccgccttcttcctcgtcgtcacgctcatcgtcctcgtc 140 |||||||| ||||| |||||| |||| |||||||||||||| |||||||||| |||||| Sbjct: 210 gagatggttttcgtgtggctcaccgcgttcttcctcgtcgtggcgctcatcgtgctcgtc 269 Query: 141 atcttccagttgatgtgcttggcagacctggagttcgattatatcaacccgtttgattca 200 |||| |||| |||||||||||||||| |||||||| || |||||||| || || |||||| Sbjct: 270 atctaccagctgatgtgcttggcagatctggagtttgactatatcaatccattcgattca 329 Query: 201 tcctctcgaatcaataaagtggttatgccagaatttatagcgcaggcacttctaagtgca 260 ||||| || || |||||||||||||| |||||||| || ||| ||| |||||||| | Sbjct: 330 tcctcccggataaataaagtggttattccagaattcgtattgcaagcagctctaagtgta 389 Query: 261 ttattcctcttaactgggcattgggcgatgttcttgatttctgccccaatggtgtactat 320 ||||||||| || | ||||||||||| |||||||| |||||||||| |||||||||||| Sbjct: 390 ttattcctcctatcggggcattgggcaatgttcttactttctgccccgatggtgtactat 449 Query: 321 aattatac 328 || ||||| Sbjct: 450 aactatac 457 Score = 111 bits (56), Expect = 4e-21 Identities = 142/170 (83%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 333 taccagcggcggcagcatcttgtagatgtgacagagatatttaaccatctttcacgggag 392 |||||||| || || |||||||||||||| ||||| |||||||| |||||| |||||| Sbjct: 2421 taccagcgacgacaacatcttgtagatgtaacagaaatatttaatcatcttggccgggag 2480 Query: 393 aagaagcgtcgtctttttaagatagctgctcttaccatcctcctattcttgtccttattc 452 ||||| || || ||||||||||||| || ||| | || ||||||||||||||||| || Sbjct: 2481 aagaaacgccgcctttttaagatagttggtctcattattctcctattcttgtccttgttt 2540 Query: 453 tggatgatttggagtg---tactggaggaggaagagtagaatgagaaaaa 499 |||||||| |||| || || |||||||||| ||||||||||| ||||| Sbjct: 2541 tggatgatctggactgtattattggaggaggatgagtagaatgaaaaaaa 2590
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 147 bits (74), Expect = 7e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 151 tgatgtgcttggcagacctggagttcgattatatcaacccgtttgattcatcctctcgaa 210 |||||||||||||||| |||||||| || |||||||| || || ||||||||||| || | Sbjct: 1926960 tgatgtgcttggcagatctggagtttgactatatcaatccattcgattcatcctcccgga 1927019 Query: 211 tcaataaagtggttatgccagaatttatagcgcaggcacttctaagtgcattattcctct 270 | |||||||||||||| |||||||| || ||| ||| |||||||| |||||||||| Sbjct: 1927020 taaataaagtggttattccagaattcgtattgcaagcagctctaagtgtattattcctcc 1927079 Query: 271 taactgggcattgggcgatgttcttgatttctgccccaatggtgtactataattatac 328 || | ||||||||||| |||||||| |||||||||| |||||||||||||| ||||| Sbjct: 1927080 tatcggggcattgggcaatgttcttactttctgccccgatggtgtactataactatac 1927137 Score = 87.7 bits (44), Expect = 6e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 333 taccagcggcggcagcatcttgtagatgtgacagagatatttaaccatctttcacgggag 392 |||||||| || || |||||||||||||| ||||| |||||||| |||||| |||||| Sbjct: 1929101 taccagcgacgacaacatcttgtagatgtaacagaaatatttaatcatcttggccgggag 1929160 Query: 393 aagaagcgtcgtctttttaagatagctgctcttaccatcctcctattcttgtcctt 448 ||||| || || ||||||||||||| || ||| | || ||||||||||||||||| Sbjct: 1929161 aagaaacgccgcctttttaagatagttggtctcattattctcctattcttgtcctt 1929216 Score = 73.8 bits (37), Expect = 9e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 81 gagatggtcttcgtctggctcgccgccttcttcctcgtcgtcacgctcatcgtcctcgtc 140 |||||||| ||||| |||||| |||| |||||||||||||| |||||||||| |||||| Sbjct: 1926455 gagatggttttcgtgtggctcaccgcgttcttcctcgtcgtggcgctcatcgtgctcgtc 1926514 Query: 141 atcttccag 149 |||| |||| Sbjct: 1926515 atctaccag 1926523
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 147 bits (74), Expect = 7e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 151 tgatgtgcttggcagacctggagttcgattatatcaacccgtttgattcatcctctcgaa 210 |||||||||||||||| |||||||| || |||||||| || || ||||||||||| || | Sbjct: 127438 tgatgtgcttggcagatctggagtttgactatatcaatccattcgattcatcctcccgga 127497 Query: 211 tcaataaagtggttatgccagaatttatagcgcaggcacttctaagtgcattattcctct 270 | |||||||||||||| |||||||| || ||| ||| |||||||| |||||||||| Sbjct: 127498 taaataaagtggttattccagaattcgtattgcaagcagctctaagtgtattattcctcc 127557 Query: 271 taactgggcattgggcgatgttcttgatttctgccccaatggtgtactataattatac 328 || | ||||||||||| |||||||| |||||||||| |||||||||||||| ||||| Sbjct: 127558 tatcggggcattgggcaatgttcttactttctgccccgatggtgtactataactatac 127615 Score = 87.7 bits (44), Expect = 6e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 333 taccagcggcggcagcatcttgtagatgtgacagagatatttaaccatctttcacgggag 392 |||||||| || || |||||||||||||| ||||| |||||||| |||||| |||||| Sbjct: 129579 taccagcgacgacaacatcttgtagatgtaacagaaatatttaatcatcttggccgggag 129638 Query: 393 aagaagcgtcgtctttttaagatagctgctcttaccatcctcctattcttgtcctt 448 ||||| || || ||||||||||||| || ||| | || ||||||||||||||||| Sbjct: 129639 aagaaacgccgcctttttaagatagttggtctcattattctcctattcttgtcctt 129694 Score = 73.8 bits (37), Expect = 9e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 81 gagatggtcttcgtctggctcgccgccttcttcctcgtcgtcacgctcatcgtcctcgtc 140 |||||||| ||||| |||||| |||| |||||||||||||| |||||||||| |||||| Sbjct: 126933 gagatggttttcgtgtggctcaccgcgttcttcctcgtcgtggcgctcatcgtgctcgtc 126992 Query: 141 atcttccag 149 |||| |||| Sbjct: 126993 atctaccag 127001
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 147 bits (74), Expect = 7e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 151 tgatgtgcttggcagacctggagttcgattatatcaacccgtttgattcatcctctcgaa 210 |||||||||||||||| |||||||| || |||||||| || || ||||||||||| || | Sbjct: 55740 tgatgtgcttggcagatctggagtttgactatatcaatccattcgattcatcctcccgga 55799 Query: 211 tcaataaagtggttatgccagaatttatagcgcaggcacttctaagtgcattattcctct 270 | |||||||||||||| |||||||| || ||| ||| |||||||| |||||||||| Sbjct: 55800 taaataaagtggttattccagaattcgtattgcaagcagctctaagtgtattattcctcc 55859 Query: 271 taactgggcattgggcgatgttcttgatttctgccccaatggtgtactataattatac 328 || | ||||||||||| |||||||| |||||||||| |||||||||||||| ||||| Sbjct: 55860 tatcggggcattgggcaatgttcttactttctgccccgatggtgtactataactatac 55917 Score = 87.7 bits (44), Expect = 6e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 333 taccagcggcggcagcatcttgtagatgtgacagagatatttaaccatctttcacgggag 392 |||||||| || || |||||||||||||| ||||| |||||||| |||||| |||||| Sbjct: 57881 taccagcgacgacaacatcttgtagatgtaacagaaatatttaatcatcttggccgggag 57940 Query: 393 aagaagcgtcgtctttttaagatagctgctcttaccatcctcctattcttgtcctt 448 ||||| || || ||||||||||||| || ||| | || ||||||||||||||||| Sbjct: 57941 aagaaacgccgcctttttaagatagttggtctcattattctcctattcttgtcctt 57996 Score = 73.8 bits (37), Expect = 9e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 81 gagatggtcttcgtctggctcgccgccttcttcctcgtcgtcacgctcatcgtcctcgtc 140 |||||||| ||||| |||||| |||| |||||||||||||| |||||||||| |||||| Sbjct: 55235 gagatggttttcgtgtggctcaccgcgttcttcctcgtcgtggcgctcatcgtgctcgtc 55294 Query: 141 atcttccag 149 |||| |||| Sbjct: 55295 atctaccag 55303
>emb|CT980779.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 841 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 106 ccttcttcctcgtcgtcacgctcatcgtcctcgtcatcttccagttgatgtgcttggcag 165 |||||||| ||||||| | ||||||||| ||||||||| |||| | ||||||||||| | Sbjct: 90 ccttcttcgccgtcgtcgccctcatcgtcgtcgtcatctaccagctcatgtgcttggccg 149 Query: 166 acctggagttcgattatatcaacccgtttgattc 199 | |||||||||||||| || ||||| | |||||| Sbjct: 150 atctggagttcgattacataaacccttatgattc 183
>emb|CT988749.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 730 Score = 48.1 bits (24), Expect = 0.049 Identities = 36/40 (90%) Strand = Plus / Plus Query: 142 tcttccagttgatgtgcttggcagacctggagttcgatta 181 |||||||| | |||||||||||||| |||||||| ||||| Sbjct: 136 tcttccagctcatgtgcttggcagatctggagtttgatta 175
>emb|CT988675.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 730 Score = 48.1 bits (24), Expect = 0.049 Identities = 36/40 (90%) Strand = Plus / Minus Query: 142 tcttccagttgatgtgcttggcagacctggagttcgatta 181 |||||||| | |||||||||||||| |||||||| ||||| Sbjct: 595 tcttccagctcatgtgcttggcagatctggagtttgatta 556
>ref|NM_001070700.1| Oryza sativa (japonica cultivar-group) Os10g0148400 (Os10g0148400) mRNA, complete cds Length = 1662 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 96 tggctcgccgccttcttcctcgtcgtc 122 |||| |||||||||||||||||||||| Sbjct: 88 tggcgcgccgccttcttcctcgtcgtc 114
>ref|XM_001215777.1| Aspergillus terreus NIH2624 FK506-binding protein 1A (ATEG_06599) mRNA, complete cds Length = 1374 Score = 46.1 bits (23), Expect = 0.20 Identities = 32/35 (91%) Strand = Plus / Minus Query: 112 tcctcgtcgtcacgctcatcgtcctcgtcatcttc 146 ||||||||||||| |||||| || ||||||||||| Sbjct: 389 tcctcgtcgtcaccctcatcctcgtcgtcatcttc 355
>gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete sequence Length = 127132 Score = 46.1 bits (23), Expect = 0.20 Identities = 68/83 (81%) Strand = Plus / Minus Query: 147 cagttgatgtgcttggcagacctggagttcgattatatcaacccgtttgattcatcctct 206 ||||| ||||||||||||||||| || || |||||||| || || | |||||| | ||| Sbjct: 42061 cagttaatgtgcttggcagaccttgaatttgattatataaatccttatgattctgcatct 42002 Query: 207 cgaatcaataaagtggttatgcc 229 ||||| || ||| ||||| |||| Sbjct: 42001 cgaataaacaaaatggttttgcc 41979
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 ggccgcgcgcgacggccccaccc 48 ||||||||||||||||||||||| Sbjct: 201244 ggccgcgcgcgacggccccaccc 201222
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 ggccgcgcgcgacggccccaccc 48 ||||||||||||||||||||||| Sbjct: 325289 ggccgcgcgcgacggccccaccc 325267
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 26 ggccgcgcgcgacggccccaccc 48 ||||||||||||||||||||||| Sbjct: 278611 ggccgcgcgcgacggccccaccc 278633
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 gctcgccgccttcttcctcgtc 119 |||||||||||||||||||||| Sbjct: 22151119 gctcgccgccttcttcctcgtc 22151098
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 tggctcgccgccttcttcctcg 117 |||||||||||||||||||||| Sbjct: 23251 tggctcgccgccttcttcctcg 23230
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 gcggcggccgcgcgcgacggcc 42 |||||||||||||||||||||| Sbjct: 650551 gcggcggccgcgcgcgacggcc 650572
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 gctcgccgccttcttcctcgtc 119 |||||||||||||||||||||| Sbjct: 105233 gctcgccgccttcttcctcgtc 105254
>tpg|BK002278.1| TPA_inf: Drosophila melanogaster HDC11480 (HDC11480) gene, complete cds Length = 1005 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 gctcgccgccttcttcctcgtc 119 |||||||||||||||||||||| Sbjct: 935 gctcgccgccttcttcctcgtc 914
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 tggctcgccgccttcttcctcg 117 |||||||||||||||||||||| Sbjct: 15909562 tggctcgccgccttcttcctcg 15909541
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 gcggcggccgcgcgcgacggcc 42 |||||||||||||||||||||| Sbjct: 459165 gcggcggccgcgcgcgacggcc 459186
>gb|AC093478.9| Mus musculus chromosome 10, clone RP23-58C12, complete sequence Length = 242324 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 472 tggaggaggaagagtagaatga 493 |||||||||||||||||||||| Sbjct: 150002 tggaggaggaagagtagaatga 149981
>gb|AY105968.1| Zea mays PCO073110 mRNA sequence Length = 1246 Score = 44.1 bits (22), Expect = 0.77 Identities = 34/38 (89%) Strand = Plus / Plus Query: 177 gattatatcaacccgtttgattcatcctctcgaatcaa 214 |||||||||||||| | ||||||||| ||||| ||||| Sbjct: 376 gattatatcaacccatatgattcatcgtctcgcatcaa 413
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 tcgccggcggcggccgcgcgcgacg 39 |||||||| |||||||||||||||| Sbjct: 2822233 tcgccggccgcggccgcgcgcgacg 2822209
>emb|CR790384.9| Zebrafish DNA sequence from clone DKEY-208I6 in linkage group 24, complete sequence Length = 175922 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 598 tattattcatatcaaagcctt 618 ||||||||||||||||||||| Sbjct: 155964 tattattcatatcaaagcctt 155984
>ref|NM_001071415.1| Oryza sativa (japonica cultivar-group) Os10g0481500 (Os10g0481500) mRNA, complete cds Length = 1458 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 cagcggcggcagcatcttgta 356 ||||||||||||||||||||| Sbjct: 1371 cagcggcggcagcatcttgta 1351
>ref|NM_001066559.1| Oryza sativa (japonica cultivar-group) Os07g0567600 (Os07g0567600) mRNA, complete cds Length = 1232 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 gctcgccgccttcttcctcgtcgtc 122 ||||||||||||| ||||||||||| Sbjct: 1070 gctcgccgccttcctcctcgtcgtc 1094
>ref|NM_001066558.1| Oryza sativa (japonica cultivar-group) Os07g0567700 (Os07g0567700) mRNA, complete cds Length = 1581 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gctcgccgccttcttcctcgtcgtc 122 ||||||||||||| ||||||||||| Sbjct: 152 gctcgccgccttcctcctcgtcgtc 128
>ref|NM_001048956.1| Oryza sativa (japonica cultivar-group) Os01g0219600 (Os01g0219600) mRNA, complete cds Length = 1923 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 gctcacctcgccggcggcggccgcg 32 |||| |||||||||||||||||||| Sbjct: 1522 gctcgcctcgccggcggcggccgcg 1546
>ref|NM_001048955.1| Oryza sativa (japonica cultivar-group) Os01g0219500 (Os01g0219500) mRNA, complete cds Length = 1966 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 gctcacctcgccggcggcggccgcg 32 |||| |||||||||||||||||||| Sbjct: 1262 gctcgcctcgccggcggcggccgcg 1238
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 ctcgccggcggcggccgcgcgcgac 38 |||||||||||| |||||||||||| Sbjct: 3997389 ctcgccggcggccgccgcgcgcgac 3997365
>tpe|BN000514.1| TPA_exp: Zea mays mRNA for putative cystatin (cc10 gene) Length = 751 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 cgccggcggcggccgcgcgcg 36 ||||||||||||||||||||| Sbjct: 90 cgccggcggcggccgcgcgcg 110
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 tcgccggcggcggccgcgcgcgacg 39 |||||||| |||||||||||||||| Sbjct: 2137888 tcgccggccgcggccgcgcgcgacg 2137864
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 ctcatcgtcctcgtcatcttc 146 ||||||||||||||||||||| Sbjct: 1838848 ctcatcgtcctcgtcatcttc 1838868
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tcgccggcggcggccgcgcgc 35 ||||||||||||||||||||| Sbjct: 4249302 tcgccggcggcggccgcgcgc 4249282
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 cggcggcggccgcgcgcgacg 39 ||||||||||||||||||||| Sbjct: 2278285 cggcggcggccgcgcgcgacg 2278265
>ref|XM_382737.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02561.1) partial mRNA Length = 5349 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 ctcatcgtcctcgtcatcttc 146 ||||||||||||||||||||| Sbjct: 4260 ctcatcgtcctcgtcatcttc 4240
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 aacctgtttctgcagccatta 534 ||||||||||||||||||||| Sbjct: 212880 aacctgtttctgcagccatta 212900
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 cagcggcggcagcatcttgta 356 ||||||||||||||||||||| Sbjct: 12170 cagcggcggcagcatcttgta 12150 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 cagcggcggcagcatcttgta 356 ||||||||||||||||||||| Sbjct: 65316 cagcggcggcagcatcttgta 65336
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 cagcggcggcagcatcttgta 356 ||||||||||||||||||||| Sbjct: 17581 cagcggcggcagcatcttgta 17601
>ref|XM_807269.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053506517.14) partial mRNA Length = 1076 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 ctcatcgtcctcgtcatcttc 146 ||||||||||||||||||||| Sbjct: 741 ctcatcgtcctcgtcatcttc 721
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 tggctcgccgccttcttcctcgtcg 120 |||| |||||||||||||||||||| Sbjct: 2893578 tggcgcgccgccttcttcctcgtcg 2893554 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 cagcggcggcagcatcttgta 356 ||||||||||||||||||||| Sbjct: 17657050 cagcggcggcagcatcttgta 17657030 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 cagcggcggcagcatcttgta 356 ||||||||||||||||||||| Sbjct: 17710196 cagcggcggcagcatcttgta 17710216
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gctcgccgccttcttcctcgtcgtc 122 ||||||||||||| ||||||||||| Sbjct: 22754289 gctcgccgccttcctcctcgtcgtc 22754265
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 gctcacctcgccggcggcggccgcg 32 |||| |||||||||||||||||||| Sbjct: 6541372 gctcgcctcgccggcggcggccgcg 6541348
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 tggctcgccgccttcttcctcgtcg 120 |||| |||||||||||||||||||| Sbjct: 74610 tggcgcgccgccttcttcctcgtcg 74586
>emb|AL627310.5| Human DNA sequence from clone RP11-199P24 on chromosome 1, complete sequence Length = 139407 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 433 tcctattcttgtccttattct 453 ||||||||||||||||||||| Sbjct: 136571 tcctattcttgtccttattct 136551
>emb|BX927311.7| Zebrafish DNA sequence from clone CH211-235E15 in linkage group 24, complete sequence Length = 162570 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 726 agcgtgtaacataacatgtaa 746 ||||||||||||||||||||| Sbjct: 128040 agcgtgtaacataacatgtaa 128060
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 acctcgccggcggcggccgcg 32 ||||||||||||||||||||| Sbjct: 4831693 acctcgccggcggcggccgcg 4831713
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 cggcggcggccgcgcgcgacg 39 ||||||||||||||||||||| Sbjct: 1548760 cggcggcggccgcgcgcgacg 1548780
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 cggcggcggccgcgcgcgacg 39 ||||||||||||||||||||| Sbjct: 439696 cggcggcggccgcgcgcgacg 439676
>gb|AC153921.5| Mus musculus 10 BAC RP23-89C21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 212543 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 473 ggaggaggaagagtagaatgagaaa 497 ||||||||||||| ||||||||||| Sbjct: 167235 ggaggaggaagagaagaatgagaaa 167211
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 gctcacctcgccggcggcggccgcg 32 |||| |||||||||||||||||||| Sbjct: 21543 gctcgcctcgccggcggcggccgcg 21519
>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489G09 Length = 148707 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 gctcacctcgccggcggcggccgcg 32 |||| |||||||||||||||||||| Sbjct: 108852 gctcgcctcgccggcggcggccgcg 108828
>emb|CR762496.7| Zebrafish DNA sequence from clone DKEY-212J2 in linkage group 21, complete sequence Length = 239780 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 456 atgatttggagtgtactggaggaggaaga 484 ||||||||||||||| ||||| ||||||| Sbjct: 113754 atgatttggagtgtattggagtaggaaga 113726
>gb|AC012063.7| Homo sapiens BAC clone RP11-116F11 from 2, complete sequence Length = 125055 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ccttattctggatgatttgga 465 ||||||||||||||||||||| Sbjct: 19527 ccttattctggatgatttgga 19507
>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1092_A07 Length = 137081 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gctcgccgccttcttcctcgtcgtc 122 ||||||||||||| ||||||||||| Sbjct: 73631 gctcgccgccttcctcctcgtcgtc 73607
>dbj|AK109524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F10, full insert sequence Length = 1966 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 gctcacctcgccggcggcggccgcg 32 |||| |||||||||||||||||||| Sbjct: 1262 gctcgcctcgccggcggcggccgcg 1238
>dbj|AK120140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027P17, full insert sequence Length = 1583 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gctcgccgccttcttcctcgtcgtc 122 ||||||||||||| ||||||||||| Sbjct: 154 gctcgccgccttcctcctcgtcgtc 130
>ref|XM_953696.1| Neurospora crassa OR74A hypothetical protein (NCU05945.1) partial mRNA Length = 1227 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 ctcatcgtcctcgtcatcttc 146 ||||||||||||||||||||| Sbjct: 1194 ctcatcgtcctcgtcatcttc 1174
>dbj|AK111165.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B06, full insert sequence Length = 3209 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 gctcacctcgccggcggcggccgcg 32 |||| |||||||||||||||||||| Sbjct: 2666 gctcgcctcgccggcggcggccgcg 2690
>dbj|AK061242.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D01, full insert sequence Length = 1233 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 gctcgccgccttcttcctcgtcgtc 122 ||||||||||||| ||||||||||| Sbjct: 163 gctcgccgccttcctcctcgtcgtc 139
>gb|AY943953.1| Streptomyces sp. FQ1 plasmid pFP1, complete sequence Length = 39360 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 ctcgccggcggcggccgcgcg 34 ||||||||||||||||||||| Sbjct: 36732 ctcgccggcggcggccgcgcg 36712
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 cggcggcggccgcgcgcgacg 39 ||||||||||||||||||||| Sbjct: 263089 cggcggcggccgcgcgcgacg 263069
>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete sequence Length = 70311 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 cagcatcttgtagatgtgaca 365 ||||||||||||||||||||| Sbjct: 38517 cagcatcttgtagatgtgaca 38497
>gb|U86688.1|CBU86688 Coxiella burnetii ribosomal protein L7/L12 (rplL) gene, partial cds, RNA polymerase beta-subunit (rpoB) gene, complete cds, and RNA polymerase beta-prime subunit (rpoC) gene, partial cds Length = 4760 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 aacctgtttctgcagccatta 534 ||||||||||||||||||||| Sbjct: 1811 aacctgtttctgcagccatta 1831
>emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chromosome 4, complete sequence Length = 185594 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 737 taacatgtaagttaggagccactcc 761 ||||||||||||||||||| ||||| Sbjct: 165635 taacatgtaagttaggagctactcc 165611 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 144,056,425 Number of extensions: 7884512 Number of successful extensions: 178820 Number of sequences better than 10.0: 67 Number of HSP's gapped: 178811 Number of HSP's successfully gapped: 78 Length of query: 811 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 789 Effective length of database: 18,508,616,841 Effective search space: 14603298687549 Effective search space used: 14603298687549 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)