ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5e12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059939:Os07g0512200 | 224 | 4e-59 | 2 | AK121268:Os04g0624000 | 209 | 2e-54 | 3 | AK121169:Os08g0191600 | 208 | 3e-54 | 4 | AK062573:Os08g0191600 | 208 | 3e-54 | 5 | AJ417518:Os07g0512200 | 206 | 2e-53 | 6 | AK065550: | 113 | 1e-25 | 7 | Os11g0100100:Os11g0100100 | 76 | 3e-14 | 8 | AK073993:Os03g0618900 | 35 | 0.067 | 9 | Os02g0713600:Os02g0713600 | 31 | 0.98 | 10 | AK108067:Os02g0740900 | 30 | 1.3 | 11 | AF216531:Os03g0151000 | 29 | 2.9 | 12 | AK119431:Os02g0149600 | 29 | 3.7 | 13 | AK106167:Os01g0897300 | 28 | 4.8 | 14 | AK061032:Os01g0897300 | 28 | 4.8 | 15 | Os08g0242000:Os08g0242000 | 28 | 8.2 | 16 | AK110793:Os07g0136400 | 28 | 8.2 | 17 | AK069299:Os04g0119400 | 28 | 8.2 | 18 | AK067030:Os12g0641400 | 28 | 8.2 | 19 | AK065122:Os07g0634600 | 28 | 8.2 |
|---|
>AK059939:Os07g0512200 | Length = 119 Score = 224 bits (572), Expect = 4e-59 Identities = 112/119 (94%), Positives = 116/119 (97%) Frame = +2 Query: 128 MAKTCFKTEHPLERRQAESARIREKYADRIPVIVEKADKSDVPEIDKKKYLVPADLTVGQ 307 MA+T FK EHPLERRQAESARIREKY+DRIPVIVEKADK+DVPEIDKKKYLVPADLTVGQ Sbjct: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60 Query: 308 FVYVVRKRIKLSPEKAIFVFVNSTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 484 FVYVVRKRIKLSPEKAIFVFV +TLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA Sbjct: 61 FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119
>AK121268:Os04g0624000 | Length = 119 Score = 209 bits (531), Expect = 2e-54 Identities = 101/117 (86%), Positives = 112/117 (95%) Frame = +2 Query: 128 MAKTCFKTEHPLERRQAESARIREKYADRIPVIVEKADKSDVPEIDKKKYLVPADLTVGQ 307 MAK+ FK +H LERRQAE+ RIREKY+DRIPVIVEKA++SD+P+IDKKKYLVPADLTVGQ Sbjct: 1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60 Query: 308 FVYVVRKRIKLSPEKAIFVFVNSTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 478 FVYVVRKRIKLSPEKAIF+FV +TLPPTA+LMSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 61 FVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
>AK121169:Os08g0191600 | Length = 120 Score = 208 bits (529), Expect = 3e-54 Identities = 101/117 (86%), Positives = 111/117 (94%) Frame = +2 Query: 128 MAKTCFKTEHPLERRQAESARIREKYADRIPVIVEKADKSDVPEIDKKKYLVPADLTVGQ 307 MA++ FK EHPLERRQAE+ RIREKY DRIPVIVEKA++SD+P+IDKKKYLVPADLTVGQ Sbjct: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60 Query: 308 FVYVVRKRIKLSPEKAIFVFVNSTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 478 FVYVVRKRIKLS EKAIF+FV +TLPPTA+LMSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 61 FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
>AK062573:Os08g0191600 | Length = 120 Score = 208 bits (529), Expect = 3e-54 Identities = 101/117 (86%), Positives = 111/117 (94%) Frame = +2 Query: 128 MAKTCFKTEHPLERRQAESARIREKYADRIPVIVEKADKSDVPEIDKKKYLVPADLTVGQ 307 MA++ FK EHPLERRQAE+ RIREKY DRIPVIVEKA++SD+P+IDKKKYLVPADLTVGQ Sbjct: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60 Query: 308 FVYVVRKRIKLSPEKAIFVFVNSTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 478 FVYVVRKRIKLS EKAIF+FV +TLPPTA+LMSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 61 FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
>AJ417518:Os07g0512200 | Length = 107 Score = 206 bits (523), Expect = 2e-53 Identities = 103/107 (96%), Positives = 106/107 (99%) Frame = +2 Query: 164 ERRQAESARIREKYADRIPVIVEKADKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 343 ERRQAESARIREKY+DRIPVIVEKADK+DVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS Sbjct: 1 ERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 60 Query: 344 PEKAIFVFVNSTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 484 PEKAIFVFV +TLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA Sbjct: 61 PEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 107
>AK065550: | Length = 89 Score = 113 bits (283), Expect = 1e-25 Identities = 53/89 (59%), Positives = 70/89 (78%), Gaps = 1/89 (1%) Frame = +2 Query: 215 IPVIVEKADKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVNSTLPPTA 394 + VIVE+ +S +PE++K+KYLVP D+ VGQF++++R R+ LSP A+FVFVN+TLP TA Sbjct: 1 LQVIVERFSRSSLPEMEKRKYLVPCDMPVGQFIFILRSRLHLSPGIALFVFVNNTLPQTA 60 Query: 395 SLMSAIYEENKDE-DGFLYMTYSGENTFG 478 LM ++YE KDE DGFLYM YS E TFG Sbjct: 61 QLMGSVYESYKDEDDGFLYMCYSSEKTFG 89
>Os11g0100100:Os11g0100100 | Length = 273 Score = 75.9 bits (185), Expect = 3e-14 Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 1/87 (1%) Frame = +2 Query: 221 VIVEKADKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVNSTLPPTASL 400 VIVEK +S++PE++K+K + LSP A+FVFVN+TLP TA L Sbjct: 206 VIVEKFSRSNLPEMEKRK-------------------LHLSPGTALFVFVNNTLPQTAQL 246 Query: 401 MSAIYEENKDE-DGFLYMTYSGENTFG 478 M ++YE KDE DGFLY+ YS E TFG Sbjct: 247 MGSVYESYKDEGDGFLYLCYSSEKTFG 273
>AK073993:Os03g0618900 | Length = 271 Score = 34.7 bits (78), Expect = 0.067 Identities = 27/62 (43%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = +3 Query: 24 LLPPSDFQSSLP--PRFRHPDRLDQSRPRQRHPIGWRWPRLASRPSTPWRGGKLNLPGSV 197 L PP+ F S P R R P Q RPR+ H I WP PS P R +L PGS Sbjct: 99 LPPPTAFGRSTPCPRRSRRPAPRGQIRPRE-HRI---WPPRCRIPSLPRRRARLPPPGSP 154 Query: 198 RS 203 RS Sbjct: 155 RS 156
>Os02g0713600:Os02g0713600 | Length = 418 Score = 30.8 bits (68), Expect = 0.98 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = -1 Query: 312 TNWPTVRSAGTRYFFLSISGTSDLSAFSTITGILSAYFSRILAD 181 T++PT+R F + +S + SAFST +LS + SR+ ++ Sbjct: 355 TSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLSEHRSRLTSE 398
>AK108067:Os02g0740900 | Length = 407 Score = 30.4 bits (67), Expect = 1.3 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 Query: 176 LASSPGGARS*SKSWPSPTDGMALPGTRLIEAIGVAESRGETGLKVA 36 LA SP GA S SW +LPG R +E+I A L V+ Sbjct: 186 LAVSPDGALLYSASWDRSIKVWSLPGFRCVESIAAAHDDAINALAVS 232
>AF216531:Os03g0151000 | Length = 113 Score = 29.3 bits (64), Expect = 2.9 Identities = 15/58 (25%), Positives = 23/58 (39%) Frame = +1 Query: 4 TPRLPSGCFRRATFNPVSPLDSATPIASINLVPGSAIPSVGDGQDLLQDRAPPGEEAS 177 +P +P C RR P SP+ ++ P P S+ S +PP +S Sbjct: 49 SPPIPHACRRREIERPPSPISASPPAIQHQTPPASSSSSPPSAGGAASSSSPPPSSSS 106
>AK119431:Os02g0149600 | Length = 666 Score = 28.9 bits (63), Expect = 3.7 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 9/69 (13%) Frame = +3 Query: 24 LLPPSDFQSSLPPRFRHPDRLDQSRPRQRHPIGWR---------WPRLASRPSTPWRGGK 176 L PP SS P R DR ++ P G R WPR S S P RGG+ Sbjct: 59 LPPPPPLGSSRPERLAS-DRPEEGASAAAQPCGGRSESPTARSMWPRRLSPASLPPRGGR 117 Query: 177 LNLPGSVRS 203 + + RS Sbjct: 118 RSESPTPRS 126
>AK106167:Os01g0897300 | Length = 278 Score = 28.5 bits (62), Expect = 4.8 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Frame = -2 Query: 509 LQWPGRWIRQTRKCSRHCKS--CTGSHPRPCF 420 LQWPG RQT C C S C SHP F Sbjct: 53 LQWPGTVCRQTSHC---CSSNGCCRSHPLKFF 81
>AK061032:Os01g0897300 | Length = 271 Score = 28.5 bits (62), Expect = 4.8 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Frame = -2 Query: 509 LQWPGRWIRQTRKCSRHCKS--CTGSHPRPCF 420 LQWPG RQT C C S C SHP F Sbjct: 32 LQWPGTVCRQTSHC---CSSNGCCRSHPLKFF 60
>Os08g0242000:Os08g0242000 | Length = 573 Score = 27.7 bits (60), Expect = 8.2 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +3 Query: 102 RQRHPIGWRWPRLASRPSTP 161 R R +G RWP A+RP+ P Sbjct: 509 RPRRAVGVRWPAAAARPAAP 528
>AK110793:Os07g0136400 | Length = 230 Score = 27.7 bits (60), Expect = 8.2 Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 8/61 (13%) Frame = -2 Query: 509 LQWPGRWIRQTRKCSRHCKSCTGSHPRP--------CFLHRSQTSTKQSVARCYSQRRRW 354 L WP W+RQ S + RP C L S +T R Y R W Sbjct: 6 LVWPRSWLRQASSSSAPVAVGCPTRRRPSPAAAAEKCSLPASPPTTAGVARRTYGTRGGW 65 Query: 353 P 351 P Sbjct: 66 P 66
>AK069299:Os04g0119400 | Length = 425 Score = 27.7 bits (60), Expect = 8.2 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +2 Query: 269 KKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVNSTLPPTASLMSAIYEENK 427 KKY++ +L + + K+I E+A+ S LPP + L+ ++ + K Sbjct: 349 KKYIIEQNLATESELKSIEKKIDDVVEEAVEFADASPLPPRSQLLENVFSDPK 401
>AK067030:Os12g0641400 | Length = 489 Score = 27.7 bits (60), Expect = 8.2 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = +3 Query: 87 DQSRPRQRHPIGWRWPRLASRP 152 D RP RHP R PRLA RP Sbjct: 43 DPLRPGARHPARLRQPRLALRP 64
>AK065122:Os07g0634600 | Length = 411 Score = 27.7 bits (60), Expect = 8.2 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -2 Query: 278 DTSSYQFPGHQTYQPSQQSPEFYQRTSHGSWQIQLASSP 162 D +S FP Q P+ Q+P F T++ WQ+Q + +P Sbjct: 260 DKTSCFFP--QNVVPNIQTPTFILNTAYDVWQLQQSVAP 296 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,562,720 Number of extensions: 522236 Number of successful extensions: 1569 Number of sequences better than 10.0: 19 Number of HSP's gapped: 1566 Number of HSP's successfully gapped: 19 Length of query: 242 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 144 Effective length of database: 11,475,837 Effective search space: 1652520528 Effective search space used: 1652520528 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
