| Clone Name | FLbaf5e01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0501000:Os04g0501000 | 207 | 6e-54 | 2 | AK120842:Os01g0348700 | 206 | 2e-53 | 3 | AK061319: | 30 | 1.3 |
|---|
>Os04g0501000:Os04g0501000 | Length = 192 Score = 207 bits (527), Expect = 6e-54 Identities = 112/171 (65%), Positives = 116/171 (67%) Frame = +1 Query: 19 RLAPAPQEGKFKRLS*EAQMXXXXXXXXXXXXXXXXXXXXXXXXSGSIKKTAKKIRTSVT 198 R +P FKR EA M SG+ KKT KKIRTSVT Sbjct: 22 RRSPEGASPPFKRQPCEAPMAPKAAPAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVT 81 Query: 199 FHRPKTLSKARDPKYPRISTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFXXXXXXX 378 FHRPKTL K+RDPKYPR+STPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVF Sbjct: 82 FHRPKTLKKSRDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKAD 141 Query: 379 XXXXXXXXXXMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 531 MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII Sbjct: 142 KKKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 192
>AK120842:Os01g0348700 | Length = 152 Score = 206 bits (523), Expect = 2e-53 Identities = 104/127 (81%), Positives = 107/127 (84%) Frame = +1 Query: 151 SGSIKKTAKKIRTSVTFHRPKTLSKARDPKYPRISTPGRNKLDQYQILKYPLTTESAMKK 330 SGSIK+ +KKIRTSVTFHRPKTL KARDPKYPR+S PGRNKLDQYQILKYPLTTESAMKK Sbjct: 26 SGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVSAPGRNKLDQYQILKYPLTTESAMKK 85 Query: 331 IEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDV 510 IEDNNTLVF MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDV Sbjct: 86 IEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDV 145 Query: 511 ANKIGII 531 ANKIGII Sbjct: 146 ANKIGII 152
>AK061319: | Length = 364 Score = 30.4 bits (67), Expect = 1.3 Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 12/92 (13%) Frame = -2 Query: 526 CRSCWPRQEHHSLVSA------------SHRPSSCRPA*SGC*PSWPGYRTSFLPQPXXX 383 C SCW SL SA + ++C P SGC WP + S++ Sbjct: 171 CGSCWAFSAIGSLESAYCLKYGSLTLLSEQQVTNCDPQSSGCDGGWPSWALSYIKS---- 226 Query: 382 SCLP*GQR*RQGCCCPRSSSLQTRWSKGT*GS 287 G C +SS T S G GS Sbjct: 227 ----------NGGVCTSASSPYTLGSSGVTGS 248 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,560,871 Number of extensions: 396317 Number of successful extensions: 1169 Number of sequences better than 10.0: 3 Number of HSP's gapped: 1163 Number of HSP's successfully gapped: 3 Length of query: 239 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 141 Effective length of database: 11,475,837 Effective search space: 1618093017 Effective search space used: 1618093017 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)