ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf5e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0501000:Os04g0501000 207 6e-54
2AK120842:Os01g0348700 206 2e-53
3AK061319: 30 1.3

>Os04g0501000:Os04g0501000 |
          Length = 192
 Score =  207 bits (527), Expect = 6e-54
 Identities = 112/171 (65%), Positives = 116/171 (67%)
 Frame = +1

Query: 19  RLAPAPQEGKFKRLS*EAQMXXXXXXXXXXXXXXXXXXXXXXXXSGSIKKTAKKIRTSVT 198
           R +P      FKR   EA M                        SG+ KKT KKIRTSVT
Sbjct: 22  RRSPEGASPPFKRQPCEAPMAPKAAPAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVT 81

Query: 199 FHRPKTLSKARDPKYPRISTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFXXXXXXX 378
           FHRPKTL K+RDPKYPR+STPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVF       
Sbjct: 82  FHRPKTLKKSRDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKAD 141

Query: 379 XXXXXXXXXXMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 531
                     MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 142 KKKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 192



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>AK120842:Os01g0348700 |
          Length = 152

 Score =  206 bits (523), Expect = 2e-53
 Identities = 104/127 (81%), Positives = 107/127 (84%)
 Frame = +1

Query: 151 SGSIKKTAKKIRTSVTFHRPKTLSKARDPKYPRISTPGRNKLDQYQILKYPLTTESAMKK 330
           SGSIK+ +KKIRTSVTFHRPKTL KARDPKYPR+S PGRNKLDQYQILKYPLTTESAMKK
Sbjct: 26  SGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVSAPGRNKLDQYQILKYPLTTESAMKK 85

Query: 331 IEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDV 510
           IEDNNTLVF                 MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDV
Sbjct: 86  IEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDV 145

Query: 511 ANKIGII 531
           ANKIGII
Sbjct: 146 ANKIGII 152



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>AK061319: |
          Length = 364

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 12/92 (13%)
 Frame = -2

Query: 526 CRSCWPRQEHHSLVSA------------SHRPSSCRPA*SGC*PSWPGYRTSFLPQPXXX 383
           C SCW      SL SA              + ++C P  SGC   WP +  S++      
Sbjct: 171 CGSCWAFSAIGSLESAYCLKYGSLTLLSEQQVTNCDPQSSGCDGGWPSWALSYIKS---- 226

Query: 382 SCLP*GQR*RQGCCCPRSSSLQTRWSKGT*GS 287
                      G  C  +SS  T  S G  GS
Sbjct: 227 ----------NGGVCTSASSPYTLGSSGVTGS 248


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,560,871
Number of extensions: 396317
Number of successful extensions: 1169
Number of sequences better than 10.0: 3
Number of HSP's gapped: 1163
Number of HSP's successfully gapped: 3
Length of query: 239
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 141
Effective length of database: 11,475,837
Effective search space: 1618093017
Effective search space used: 1618093017
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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