No.
Definition
Score (bits)
E Value
1 ref|NM_001049962.1| Oryza sativa (japonica cultivar-group) Os01g...
932
0.0
2 dbj|AK067338.1| Oryza sativa (japonica cultivar-group) cDNA clon...
916
0.0
3 dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clon...
904
0.0
4 ref|NM_001063031.1| Oryza sativa (japonica cultivar-group) Os05g...
896
0.0
5 dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clon...
896
0.0
6 gb|AY106902.1| Zea mays PCO068526 mRNA sequence
383
e-102
7 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
218
9e-53
8 dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D...
218
9e-53
9 gb|AY108645.1| Zea mays PCO071128 mRNA sequence
208
9e-50
10 dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D...
165
1e-36
11 gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome...
149
7e-32
12 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
149
7e-32
13 ref|NM_102783.4| Arabidopsis thaliana unknown protein (AT1G30470...
115
1e-21
14 dbj|AK229435.1| Arabidopsis thaliana mRNA for hypothetical prote...
78
2e-10
15 ref|NM_100673.2| Arabidopsis thaliana unknown protein (AT1G07990...
78
2e-10
16 gb|AY127028.1| Arabidopsis thaliana At1g07990/T6D22_5 mRNA, comp...
78
2e-10
17 gb|BT004535.1| Arabidopsis thaliana At1g07990/T6D22_5 gene, comp...
78
2e-10
18 gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana...
78
2e-10
19 gb|AC189342.1| Brassica rapa subsp. pekinensis clone KBrB042D24,...
74
3e-09
20 ref|NM_001060441.1| Oryza sativa (japonica cultivar-group) Os04g...
72
1e-08
21 dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
1e-08
22 gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G1...
72
1e-08
23 emb|CR855160.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
64
3e-06
24 ref|NM_128396.1| Arabidopsis thaliana unknown protein (AT2G28360...
64
3e-06
25 gb|AY136417.1| Arabidopsis thaliana unknown protein (At2g28360) ...
64
3e-06
26 gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map ...
64
3e-06
27 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
64
3e-06
28 emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,...
64
3e-06
29 dbj|AP004505.1| Lotus japonicus genomic DNA, chromosome 3, clone...
60
5e-05
30 gb|BT018856.1| Zea mays clone EL01N0556E05.d mRNA sequence
58
2e-04
31 emb|CT987037.1| partial cDNA sequence from a Lambda ZAP II norma...
54
0.003
32 emb|CT982509.1| partial cDNA sequence from a Lambda ZAP II norma...
52
0.012
33 ref|NM_114388.2| Arabidopsis thaliana unknown protein (AT3G45190...
52
0.012
34 gb|AC189518.1| Brassica rapa subsp. pekinensis clone KBrB090M17,...
50
0.049
35 dbj|D21822.1|LILLIM16 Lilium longiflorum LIM16 mRNA, partial cds...
50
0.049
36 gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, ...
48
0.19
37 emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BA...
46
0.76
38 gb|AC115690.13| Mus musculus chromosome 12, clone RP24-537M9, co...
44
3.0
39 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
44
3.0
40 dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, se...
44
3.0
41 gb|AC153020.5| Mus musculus BAC clone RP23-88P1 from chromosome ...
44
3.0
42 gb|AC154141.7| Mus musculus chromosome 7, clone RP24-343G19, com...
44
3.0
43 gb|AC167668.1| Mus musculus BAC clone RP24-241I19 from chromosom...
44
3.0
44 gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown,...
44
3.0
45 gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G...
44
3.0
46 gb|AF103901.2|AF103901 Perca flavescens lysyl oxidase-like prote...
44
3.0
47 gb|AF143003.2|AF143003 Perca flavescens lysyl oxidase related pr...
44
3.0
48 dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, sectio...
44
3.0
49 emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536...
44
3.0
50 gb|AC139381.4| Mus musculus BAC clone RP23-171D1 from 13, comple...
44
3.0
51 dbj|AP000254.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2...
44
3.0
52 dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2...
44
3.0
>ref|NM_001049962.1 | Oryza sativa (japonica cultivar-group) Os01g0585700 (Os01g0585700)
mRNA, partial cds
Length = 1824
Score = 932 bits (470), Expect = 0.0
Identities = 802/912 (87%), Gaps = 3/912 (0%)
Strand = Plus / Plus
Query: 1126 tgcctacaacttatggatgtttacgcccacctctggggaaacatcgactgaagattgtgg 1185
||||||| || |||||||||||||||||||| || || |||||||| ||||||||||||
Sbjct: 1 tgcctacgacatatggatgtttacgcccaccccttggaaaacatcgtttgaagattgtgg 60
Query: 1186 agttcatctctgttttgctgacagttggtagtgaaactgctgaacaagagctgatcagcc 1245
|||||||||| ||| |||||||| |||| |||||||||||||| ||||||| ||||| |
Sbjct: 61 agttcatctcagttctgctgacaattggcagtgaaactgctgagaaagagcttatcaggc 120
Query: 1246 aatcggcaataaagcgctccattgacctattctttgagtacccgtacaacaactttttgc 1305
|||||||||||||||| || |||| ||||||| |||||||| || ||||| |||||||
Sbjct: 121 aatcggcaataaagcgatctgttgatttattcttcgagtacccatataacaattttttgc 180
Query: 1306 accatcatgtcgagaatataattgtttcttgcctggagggtaaaagaacagaacttgtcg 1365
|||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |
Sbjct: 181 accatcatgttgagaatattattgtctcttgcctggagggtaaaagaactgaacttgttg 240
Query: 1366 agcatgttcttaatgaatgtgacattgttggtaaaattcttgctgccgacaagctttctt 1425
|||||||||||||||| |||||||||||||||||||||||||| || || || |||||||
Sbjct: 241 agcatgttcttaatgactgtgacattgttggtaaaattcttgccgcggaaaaactttctt 300
Query: 1426 ctttgtcaacagagtctaatgggcctactgtgccgtctgaagggaaaaccccttcaaaaa 1485
|||||||||||||||||| |||||||||| | || || || || ||| | | | ||||
Sbjct: 301 ctttgtcaacagagtctactgggcctactataccttcagatggtaaatcgattcccaaaa 360
Query: 1486 ttgggaatgttggtcacatgacaagaatagccaataaactcattcagttgggaaatagta 1545
|||||||| |||||||||||||||||||| |||| || || ||||||||||||| ||||
Sbjct: 361 ttgggaatattggtcacatgacaagaataaccaacaagcttattcagttgggaagcagta 420
Query: 1546 atagcacaatccagactcacctgcagggtaacagtgagtgggttgaatggcagacagatg 1605
| |||||||||||| |||| |||||| || |||||||||||||| ||||| |||||||
Sbjct: 421 acggcacaatccagattcacttgcaggaaaatagtgagtgggttgactggcaaacagatg 480
Query: 1606 ttctggtcaggcgaaatgaggtggagaatgtttatcattgggcttgtggacggccaacct 1665
|||| |||| ||| ||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 481 ttctagtcaagcgtaatgaggtggagaatgtttatcattgggcttgtgggcgcccaacat 540
Query: 1666 cgcttcatgaccgtggtagggatagtgatgatgacgacttccgagacagggattatgatg 1725
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 541 cacttcatgaccgtggtagggatagtgatgatgatgacttccgagacagggattatgatg 600
Query: 1726 ttgcagctctggccaataacttgagccaggcattccgctatgggatatacagcaatgatg 1785
| |||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 601 tggcagctcttgctaataacttgagccaggcattccgatatgggatatatagcaatgatg 660
Query: 1786 acattgaagaggcgcaagggtcacttgaacgggatgatgaggatgtctattttgatgacg 1845
| || |||||| |||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 661 atatggaagagaatcaagggacacttgaacgggatgatgaggatgtctattttgatgatg 720
Query: 1846 aatcagctgaggtggtaatatcttccctgcgtctgggagatgatccggacggttccctct 1905
||||||| ||||| ||||||||||| ||||| ||||||||||||| ||| ||||||||||
Sbjct: 721 aatcagcagaggtcgtaatatcttcactgcgactgggagatgatcaggatggttccctct 780
Query: 1906 ttacaaattcaaattggttcacgtttgatggagagagaggtatcaatgaccgtttagctg 1965
|||||||||| |||||||| || |||||||||||||||||||| | ||||||||| ||||
Sbjct: 781 ttacaaattcgaattggtttacatttgatggagagagaggtattactgaccgtttggctg 840
Query: 1966 cctctgttccttcgtcctcacccaactctgaggaggcttccacagacatcgaggaagttg 2025
| ||||||||||| ||||| || || |||||| |||| |||||| |||||| ||
Sbjct: 841 ---cggttccttcgtcttcacctaattcagaggagatttccccagacactgaggaaactg 897
Query: 2026 atgatggtgaag 2037
||||||||||||
Sbjct: 898 atgatggtgaag 909
Score = 56.0 bits (28), Expect = 8e-04
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 2717 agcaaactgctgtacaataagca-agtgtacta-ttttgccttccattgtggccaatcac 2774
|||||||||||||||||||| | ||||||||| ||||||| |||||||||| | ||| |
Sbjct: 1479 agcaaactgctgtacaataaaaagagtgtactatttttgccatccattgtggtctatccc 1538
Query: 2775 tgtacaaa 2782
||||||||
Sbjct: 1539 tgtacaaa 1546
Score = 52.0 bits (26), Expect = 0.012
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 2584 aagcaaatgagtgaagtggcagcctatctcatggactgaaatggcatagctgac 2637
|||||||||||||||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 1351 aagcaaatgagtgaaggggcaggaaatctcatgggctaaaatggcatagttgac 1404
>dbj|AK067338.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013100L14, full
insert sequence
Length = 1823
Score = 916 bits (462), Expect = 0.0
Identities = 801/912 (87%), Gaps = 4/912 (0%)
Strand = Plus / Plus
Query: 1126 tgcctacaacttatggatgtttacgcccacctctggggaaacatcgactgaagattgtgg 1185
||||||| || |||||||||||||||||||| || || |||||||| ||||||||||||
Sbjct: 1 tgcctacgacatatggatgtttacgcccaccccttggaaaacatcgtttgaagattgtgg 60
Query: 1186 agttcatctctgttttgctgacagttggtagtgaaactgctgaacaagagctgatcagcc 1245
|||||||||| ||| |||||||| |||| |||||||||||||| ||||||| ||||| |
Sbjct: 61 agttcatctcagttctgctgacaattggcagtgaaactgctgagaaagagcttatcaggc 120
Query: 1246 aatcggcaataaagcgctccattgacctattctttgagtacccgtacaacaactttttgc 1305
|||||||||||||||| || |||| ||||||| |||||||| || ||||| |||||||
Sbjct: 121 aatcggcaataaagcgatctgttgatttattcttcgagtacccatataacaattttttgc 180
Query: 1306 accatcatgtcgagaatataattgtttcttgcctggagggtaaaagaacagaacttgtcg 1365
|||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |
Sbjct: 181 accatcatgttgagaatattattgtctcttgcctggagggtaaaagaactgaacttgttg 240
Query: 1366 agcatgttcttaatgaatgtgacattgttggtaaaattcttgctgccgacaagctttctt 1425
|||||||||||||||| |||||||||||||||||||||||||| || || || |||||||
Sbjct: 241 agcatgttcttaatgactgtgacattgttggtaaaattcttgccgcggaaaaactttctt 300
Query: 1426 ctttgtcaacagagtctaatgggcctactgtgccgtctgaagggaaaaccccttcaaaaa 1485
|||||||||||||||||| |||||||||| | || || || || ||| | | | ||||
Sbjct: 301 ctttgtcaacagagtctactgggcctactataccttcagatggtaaatcgattcccaaaa 360
Query: 1486 ttgggaatgttggtcacatgacaagaatagccaataaactcattcagttgggaaatagta 1545
|||||||| |||||||||||||||||||| |||| || || ||||||||||||| ||||
Sbjct: 361 ttgggaatattggtcacatgacaagaataaccaacaagcttattcagttgggaagcagta 420
Query: 1546 atagcacaatccagactcacctgcagggtaacagtgagtgggttgaatggcagacagatg 1605
| |||||||||||| |||| |||||| || |||||||||||||| ||||| |||||||
Sbjct: 421 acggcacaatccagattcacttgcaggaaaatagtgagtgggttgactggcaaacagatg 480
Query: 1606 ttctggtcaggcgaaatgaggtggagaatgtttatcattgggcttgtggacggccaacct 1665
|||| |||| ||| |||||| |||||||||||||||||||||||||||| || ||||| |
Sbjct: 481 ttctagtcaagcgtaatgag-tggagaatgtttatcattgggcttgtgggcgcccaacat 539
Query: 1666 cgcttcatgaccgtggtagggatagtgatgatgacgacttccgagacagggattatgatg 1725
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 540 cacttcatgaccgtggtagggatagtgatgatgatgacttccgagacagggattatgatg 599
Query: 1726 ttgcagctctggccaataacttgagccaggcattccgctatgggatatacagcaatgatg 1785
| |||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 600 tggcagctcttgctaataacttgagccaggcattccgatatgggatatatagcaatgatg 659
Query: 1786 acattgaagaggcgcaagggtcacttgaacgggatgatgaggatgtctattttgatgacg 1845
| || |||||| |||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 660 atatggaagagaatcaagggacacttgaacgggatgatgaggatgtctattttgatgatg 719
Query: 1846 aatcagctgaggtggtaatatcttccctgcgtctgggagatgatccggacggttccctct 1905
||||||| ||||| ||||||||||| ||||| ||||||||||||| ||| ||||||||||
Sbjct: 720 aatcagcagaggtcgtaatatcttcactgcgactgggagatgatcaggatggttccctct 779
Query: 1906 ttacaaattcaaattggttcacgtttgatggagagagaggtatcaatgaccgtttagctg 1965
|||||||||| |||||||| || |||||||||||||||||||| | ||||||||| ||||
Sbjct: 780 ttacaaattcgaattggtttacatttgatggagagagaggtattactgaccgtttggctg 839
Query: 1966 cctctgttccttcgtcctcacccaactctgaggaggcttccacagacatcgaggaagttg 2025
| ||||||||||| ||||| || || |||||| |||| |||||| |||||| ||
Sbjct: 840 ---cggttccttcgtcttcacctaattcagaggagatttccccagacactgaggaaactg 896
Query: 2026 atgatggtgaag 2037
||||||||||||
Sbjct: 897 atgatggtgaag 908
Score = 56.0 bits (28), Expect = 8e-04
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 2717 agcaaactgctgtacaataagca-agtgtacta-ttttgccttccattgtggccaatcac 2774
|||||||||||||||||||| | ||||||||| ||||||| |||||||||| | ||| |
Sbjct: 1478 agcaaactgctgtacaataaaaagagtgtactatttttgccatccattgtggtctatccc 1537
Query: 2775 tgtacaaa 2782
||||||||
Sbjct: 1538 tgtacaaa 1545
Score = 52.0 bits (26), Expect = 0.012
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 2584 aagcaaatgagtgaagtggcagcctatctcatggactgaaatggcatagctgac 2637
|||||||||||||||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 1350 aagcaaatgagtgaaggggcaggaaatctcatgggctaaaatggcatagttgac 1403
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
Length = 43261740
Score = 218 bits (110), Expect = 9e-53
Identities = 152/166 (91%)
Strand = Plus / Plus
Query: 1283 gtacccgtacaacaactttttgcaccatcatgtcgagaatataattgtttcttgcctgga 1342
|||||| || ||||| ||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 22776300 gtacccatataacaattttttgcaccatcatgttgagaatattattgtctcttgcctgga 22776359
Query: 1343 gggtaaaagaacagaacttgtcgagcatgttcttaatgaatgtgacattgttggtaaaat 1402
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 22776360 gggtaaaagaactgaacttgttgagcatgttcttaatgactgtgacattgttggtaaaat 22776419
Query: 1403 tcttgctgccgacaagctttcttctttgtcaacagagtctaatggg 1448
|||||| || || || ||||||||||||||||||||||||| ||||
Sbjct: 22776420 tcttgccgcggaaaaactttcttctttgtcaacagagtctactggg 22776465
Score = 204 bits (103), Expect = 1e-48
Identities = 181/207 (87%)
Strand = Plus / Plus
Query: 876 agttttgttgggaggttgttctgccatgcccttgaaggatcaagacccaagtctgtgctg 935
||||||||||||||| | || | ||||| ||||||| |||||| ||||| || || ||
Sbjct: 22774809 agttttgttgggaggctatttcgtcatgcacttgaagaatcaaggcccaaatccgttcta 22774868
Query: 936 gttcattcattgtcagtgtgcatatctttactggacccaaaaagattggcatcagcttcc 995
||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 22774869 gttcattcattgtcagtgtgcatatctctgttggatccaaaaagattggcatcagcttcc 22774928
Query: 996 tatcaagcattcagaagcaatgtaagtcatggggcattggtcactgccagtcctgagaca 1055
||||||||||| |||||||| ||||||| ||||| ||||||||||||||||| |||||
Sbjct: 22774929 tatcaagcatttagaagcaacttaagtcacggggcgttggtcactgccagtccagagact 22774988
Query: 1056 gttgatggtatgctcgagagtctaggt 1082
|||||||| ||||| ||||| ||||||
Sbjct: 22774989 gttgatggcatgcttgagagcctaggt 22775015
Score = 196 bits (99), Expect = 3e-46
Identities = 129/139 (92%)
Strand = Plus / Plus
Query: 1659 ccaacctcgcttcatgaccgtggtagggatagtgatgatgacgacttccgagacagggat 1718
||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 22776947 ccaacatcacttcatgaccgtggtagggatagtgatgatgatgacttccgagacagggat 22777006
Query: 1719 tatgatgttgcagctctggccaataacttgagccaggcattccgctatgggatatacagc 1778
|||||||| |||||||| || ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 22777007 tatgatgtggcagctcttgctaataacttgagccaggcattccgatatgggatatatagc 22777066
Query: 1779 aatgatgacattgaagagg 1797
|||||||| || |||||||
Sbjct: 22777067 aatgatgatatggaagagg 22777085
Score = 174 bits (88), Expect = 1e-39
Identities = 100/104 (96%)
Strand = Plus / Plus
Query: 211 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 270
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 22772327 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 22772386
Query: 271 attattcaagagtgcaaagcactgaacacccgactcataaattt 314
|||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 22772387 attattcaagagtgcaaagctctgaatacacgactcataaattt 22772430
Score = 165 bits (83), Expect = 1e-36
Identities = 125/139 (89%)
Strand = Plus / Plus
Query: 1659 ccaacctcgcttcatgaccgtggtagggatagtgatgatgacgacttccgagacagggat 1718
||||| || ||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 22789126 ccaacatcacttcatgactgtggtagggatagtgatgatgacgacttccgagacatggat 22789185
Query: 1719 tatgatgttgcagctctggccaataacttgagccaggcattccgctatgggatatacagc 1778
|||||||| | |||||| | |||||||||||||||||||| || ||||||||||| |||
Sbjct: 22789186 tatgatgtggtagctcttactaataacttgagccaggcattgcgatatgggatatatagc 22789245
Query: 1779 aatgatgacattgaagagg 1797
|||||||| || |||||||
Sbjct: 22789246 aatgatgatatggaagagg 22789264
Score = 165 bits (83), Expect = 1e-36
Identities = 125/139 (89%)
Strand = Plus / Minus
Query: 1659 ccaacctcgcttcatgaccgtggtagggatagtgatgatgacgacttccgagacagggat 1718
||||| || |||||||||| ||||||||||||||||||||| || |||||||||||||||
Sbjct: 22800550 ccaacatcacttcatgaccatggtagggatagtgatgatgatgatttccgagacagggat 22800491
Query: 1719 tatgatgttgcagctctggccaataacttgagccaggcattccgctatgggatatacagc 1778
|||||||| |||||||| || ||||||||||||||||||||||| |||| |||||| | |
Sbjct: 22800490 tatgatgtggcagctcttgctaataacttgagccaggcattccgatatgtgatatataac 22800431
Query: 1779 aatgatgacattgaagagg 1797
|||||||| || |||||||
Sbjct: 22800430 aatgatgatatggaagagg 22800412
Score = 145 bits (73), Expect = 1e-30
Identities = 97/105 (92%)
Strand = Plus / Plus
Query: 679 tgattggtgctgatgagaccatatattcaaactatgctgatacaatgcagtggttagaaa 738
||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||
Sbjct: 22774148 tgattggtgctgatgagaccatatactcaaactatggcgatacattgcagtggttagaaa 22774207
Query: 739 atacagatgttcttggaatgatcgcagataagtttagctcatcgg 783
|||||||||| |||| |||||| || |||||||||||||||||||
Sbjct: 22774208 atacagatgtccttgaaatgattgctgataagtttagctcatcgg 22774252
Score = 143 bits (72), Expect = 4e-30
Identities = 90/96 (93%)
Strand = Plus / Plus
Query: 782 ggactctcctgaagtgcatgccaatgctgccgaaattctttgtgctgtgactcgatgtgc 841
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 22774447 ggactcccctgaagtgcatgccaatgctgccgaaattctttgtgccgtgactcgatgtgc 22774506
Query: 842 acctccatctctcgctgcaaaaatatgcagtccaag 877
||||||||||| |||||||| |||||||| |||||
Sbjct: 22774507 tcctccatctcttgctgcaaagatatgcagcccaag 22774542
Score = 113 bits (57), Expect = 4e-21
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1578 agtgagtgggttgaatggcagacagatgttctggtcaggcgaaatgaggtggagaatgtt 1637
|||||||||||||| ||||| ||||||||||| |||| ||| ||||||||||||||||||
Sbjct: 22776769 agtgagtgggttgactggcaaacagatgttctagtcaagcgtaatgaggtggagaatgtt 22776828
Query: 1638 tatcattgggcttgtgg 1654
|||||||||||||||||
Sbjct: 22776829 tatcattgggcttgtgg 22776845
Score = 109 bits (55), Expect = 6e-20
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 476 agttaatggatttgcttttctcatttgtgaaacctgatcatccacacagcacattattat 535
|||||||||| ||||||||||||||||||||| | ||||||||||| |||||||| ||||
Sbjct: 22773391 agttaatggaattgcttttctcatttgtgaaatccgatcatccacatagcacattgttat 22773450
Query: 536 ctggttacttcagtaaggt 554
||||||||||||| |||||
Sbjct: 22773451 ctggttacttcagcaaggt 22773469
Score = 109 bits (55), Expect = 6e-20
Identities = 120/141 (85%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 1897 gttccctctttacaaattcaaattggttcacgtttgatggagagagaggtatcaatgacc 1956
||||||||||||||||||| |||||||| || |||||||||||||||||||| | |||||
Sbjct: 22777741 gttccctctttacaaattcgaattggtttacatttgatggagagagaggtattactgacc 22777800
Query: 1957 gtttagctgcctctgttccttcgtcctcacccaactctgaggaggcttccacagacatcg 2016
|||| |||| | ||||||||||| ||||| || || |||||| |||| |||||| |
Sbjct: 22777801 gtttggctg---cggttccttcgtcttcacctaattcagaggagatttccccagacactg 22777857
Query: 2017 aggaagttgatgatggtgaag 2037
||||| ||||||||||||||
Sbjct: 22777858 aggaaactgatgatggtgaag 22777878
Score = 107 bits (54), Expect = 2e-19
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 409 ttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccctagtagag 468
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 22773219 ttcattgcttgtgagatatttacatgtgaaattgatgtcattttgaggaccctagtcgag 22773278
Query: 469 gatgaa 474
||||||
Sbjct: 22773279 gatgaa 22773284
Score = 107 bits (54), Expect = 2e-19
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 1078 taggtaatttgctgaacttattggacacctctgctgctgaaaatgttttgcctacaactt 1137
|||| ||||||||||| |||||||| || |||| ||||||||||||||||||||| || |
Sbjct: 22775174 taggcaatttgctgaagttattggatacttctgatgctgaaaatgttttgcctacgacat 22775233
Query: 1138 atggatgtttacgcccacctctggggaaacatcg 1171
||||||||||||||||||| || || ||||||||
Sbjct: 22775234 atggatgtttacgcccaccccttggaaaacatcg 22775267
Score = 105 bits (53), Expect = 1e-18
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 1177 agattgtggagttcatctctgttttgctgacagttggtagtgaaactgctgaacaagagc 1236
||||||||||||||||||| ||| |||||||| |||| |||||||||||||| ||||||
Sbjct: 22776114 agattgtggagttcatctcagttctgctgacaattggcagtgaaactgctgagaaagagc 22776173
Query: 1237 tgatcagccaatcggcaataaagcg 1261
| ||||| |||||||||||||||||
Sbjct: 22776174 ttatcaggcaatcggcaataaagcg 22776198
Score = 93.7 bits (47), Expect = 4e-15
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 1482 aaaattgggaatgttggtcacatgacaagaatagccaataaactcattcagttgggaaat 1541
|||||||||||| |||||||||||||||||||| |||| || || |||||||||||||
Sbjct: 22776570 aaaattgggaatattggtcacatgacaagaataaccaacaagcttattcagttgggaagc 22776629
Query: 1542 agtaatagcacaatccagactcacctgcagg 1572
||||| |||||||||||| |||| ||||||
Sbjct: 22776630 agtaacggcacaatccagattcacttgcagg 22776660
Score = 91.7 bits (46), Expect = 1e-14
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1825 aggatgtctattttgatgacgaatcagctgaggtggtaatatcttccctgcgtctgggag 1884
||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 22777585 aggatgtctattttgatgatgaatcagcagaggtcgtaatatcttcactgcgactgggag 22777644
Query: 1885 atgatc 1890
||||||
Sbjct: 22777645 atgatc 22777650
Score = 79.8 bits (40), Expect = 5e-11
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1825 aggatgtctattttgatgacgaatcagctgaggtggtaatatcttccctgcgtctgggag 1884
||||||||||||||||||| |||||||| ||||| ||||||| ||| ||||| |||||||
Sbjct: 22789758 aggatgtctattttgatgatgaatcagcagaggtcgtaatatgttctctgcgactgggag 22789817
Query: 1885 atga 1888
||||
Sbjct: 22789818 atga 22789821
Score = 79.8 bits (40), Expect = 5e-11
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 1825 aggatgtctattttgatgacgaatcagctgaggtggtaatatcttccctgcgtctgggag 1884
||||||||||||||||||| |||||||| ||||| ||||||| ||| ||||| |||||||
Sbjct: 22799909 aggatgtctattttgatgatgaatcagcagaggtcgtaatatgttctctgcgactgggag 22799850
Query: 1885 atga 1888
||||
Sbjct: 22799849 atga 22799846
Score = 75.8 bits (38), Expect = 9e-10
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 317 tgcgtgacaaggcccaggtcgaacaattgcttcgttatgttgttgaagaagttccggatg 376
||||||||| |||||||| || |||||||||||||||||||| |||||||| || ||||
Sbjct: 22773045 tgcgtgacagagcccaggtggagcaattgcttcgttatgttgtggaagaagtaccagatg 22773104
Query: 377 atgctg 382
||||||
Sbjct: 22773105 atgctg 22773110
Score = 71.9 bits (36), Expect = 1e-08
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 158 ccgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcccgtg 213
||||| ||||| ||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 22771414 ccgcctccgccgccatgttctggcgcatgaccggcctgtccgcggcctcgcccgtg 22771469
Score = 60.0 bits (30), Expect = 5e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 551 aggtggtaatttgtttgatgctgcggaagactgc 584
|||||||||| |||||||||||||||||||||||
Sbjct: 22773637 aggtggtaatatgtttgatgctgcggaagactgc 22773670
Score = 58.0 bits (29), Expect = 2e-04
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 610 catccagagatcgttgtccaacttgtcgacctgattgggatcacatctgtaatggag 666
|||||||| || ||||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 22774005 catccagaaatagttgtccaactcgttgacctgattggcatcacatcaataatggag 22774061
Score = 56.0 bits (28), Expect = 8e-04
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 2717 agcaaactgctgtacaataagca-agtgtacta-ttttgccttccattgtggccaatcac 2774
|||||||||||||||||||| | ||||||||| ||||||| |||||||||| | ||| |
Sbjct: 22778448 agcaaactgctgtacaataaaaagagtgtactatttttgccatccattgtggtctatccc 22778507
Query: 2775 tgtacaaa 2782
||||||||
Sbjct: 22778508 tgtacaaa 22778515
Score = 52.0 bits (26), Expect = 0.012
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 2584 aagcaaatgagtgaagtggcagcctatctcatggactgaaatggcatagctgac 2637
|||||||||||||||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 22778320 aagcaaatgagtgaaggggcaggaaatctcatgggctaaaatggcatagttgac 22778373
Score = 48.1 bits (24), Expect = 0.19
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1800 caagggtcacttgaacgggatgatgagg 1827
|||||| |||||||||||||||||||||
Sbjct: 22777337 caagggacacttgaacgggatgatgagg 22777364
Score = 48.1 bits (24), Expect = 0.19
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1800 caagggtcacttgaacgggatgatgagg 1827
|||||| |||||||||||||||||||||
Sbjct: 22800160 caagggacacttgaacgggatgatgagg 22800133
Score = 46.1 bits (23), Expect = 0.76
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1620 aatgaggtggagaatgtttatcattgggcttgtgg 1654
||||||||||||||| |||||||||||||||||
Sbjct: 22788988 aatgaggtggagaattcgtatcattgggcttgtgg 22789022
>dbj|AP003492.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0712E02
Length = 158084
Score = 218 bits (110), Expect = 9e-53
Identities = 152/166 (91%)
Strand = Plus / Plus
Query: 1283 gtacccgtacaacaactttttgcaccatcatgtcgagaatataattgtttcttgcctgga 1342
|||||| || ||||| ||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 93689 gtacccatataacaattttttgcaccatcatgttgagaatattattgtctcttgcctgga 93748
Query: 1343 gggtaaaagaacagaacttgtcgagcatgttcttaatgaatgtgacattgttggtaaaat 1402
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 93749 gggtaaaagaactgaacttgttgagcatgttcttaatgactgtgacattgttggtaaaat 93808
Query: 1403 tcttgctgccgacaagctttcttctttgtcaacagagtctaatggg 1448
|||||| || || || ||||||||||||||||||||||||| ||||
Sbjct: 93809 tcttgccgcggaaaaactttcttctttgtcaacagagtctactggg 93854
Score = 204 bits (103), Expect = 1e-48
Identities = 181/207 (87%)
Strand = Plus / Plus
Query: 876 agttttgttgggaggttgttctgccatgcccttgaaggatcaagacccaagtctgtgctg 935
||||||||||||||| | || | ||||| ||||||| |||||| ||||| || || ||
Sbjct: 92198 agttttgttgggaggctatttcgtcatgcacttgaagaatcaaggcccaaatccgttcta 92257
Query: 936 gttcattcattgtcagtgtgcatatctttactggacccaaaaagattggcatcagcttcc 995
||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 92258 gttcattcattgtcagtgtgcatatctctgttggatccaaaaagattggcatcagcttcc 92317
Query: 996 tatcaagcattcagaagcaatgtaagtcatggggcattggtcactgccagtcctgagaca 1055
||||||||||| |||||||| ||||||| ||||| ||||||||||||||||| |||||
Sbjct: 92318 tatcaagcatttagaagcaacttaagtcacggggcgttggtcactgccagtccagagact 92377
Query: 1056 gttgatggtatgctcgagagtctaggt 1082
|||||||| ||||| ||||| ||||||
Sbjct: 92378 gttgatggcatgcttgagagcctaggt 92404
Score = 196 bits (99), Expect = 3e-46
Identities = 129/139 (92%)
Strand = Plus / Plus
Query: 1659 ccaacctcgcttcatgaccgtggtagggatagtgatgatgacgacttccgagacagggat 1718
||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 94336 ccaacatcacttcatgaccgtggtagggatagtgatgatgatgacttccgagacagggat 94395
Query: 1719 tatgatgttgcagctctggccaataacttgagccaggcattccgctatgggatatacagc 1778
|||||||| |||||||| || ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 94396 tatgatgtggcagctcttgctaataacttgagccaggcattccgatatgggatatatagc 94455
Query: 1779 aatgatgacattgaagagg 1797
|||||||| || |||||||
Sbjct: 94456 aatgatgatatggaagagg 94474
Score = 174 bits (88), Expect = 1e-39
Identities = 100/104 (96%)
Strand = Plus / Plus
Query: 211 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 270
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 89716 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 89775
Query: 271 attattcaagagtgcaaagcactgaacacccgactcataaattt 314
|||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 89776 attattcaagagtgcaaagctctgaatacacgactcataaattt 89819
Score = 165 bits (83), Expect = 1e-36
Identities = 125/139 (89%)
Strand = Plus / Plus
Query: 1659 ccaacctcgcttcatgaccgtggtagggatagtgatgatgacgacttccgagacagggat 1718
||||| || ||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 106515 ccaacatcacttcatgactgtggtagggatagtgatgatgacgacttccgagacatggat 106574
Query: 1719 tatgatgttgcagctctggccaataacttgagccaggcattccgctatgggatatacagc 1778
|||||||| | |||||| | |||||||||||||||||||| || ||||||||||| |||
Sbjct: 106575 tatgatgtggtagctcttactaataacttgagccaggcattgcgatatgggatatatagc 106634
Query: 1779 aatgatgacattgaagagg 1797
|||||||| || |||||||
Sbjct: 106635 aatgatgatatggaagagg 106653
Score = 165 bits (83), Expect = 1e-36
Identities = 125/139 (89%)
Strand = Plus / Minus
Query: 1659 ccaacctcgcttcatgaccgtggtagggatagtgatgatgacgacttccgagacagggat 1718
||||| || |||||||||| ||||||||||||||||||||| || |||||||||||||||
Sbjct: 117939 ccaacatcacttcatgaccatggtagggatagtgatgatgatgatttccgagacagggat 117880
Query: 1719 tatgatgttgcagctctggccaataacttgagccaggcattccgctatgggatatacagc 1778
|||||||| |||||||| || ||||||||||||||||||||||| |||| |||||| | |
Sbjct: 117879 tatgatgtggcagctcttgctaataacttgagccaggcattccgatatgtgatatataac 117820
Query: 1779 aatgatgacattgaagagg 1797
|||||||| || |||||||
Sbjct: 117819 aatgatgatatggaagagg 117801
Score = 145 bits (73), Expect = 1e-30
Identities = 97/105 (92%)
Strand = Plus / Plus
Query: 679 tgattggtgctgatgagaccatatattcaaactatgctgatacaatgcagtggttagaaa 738
||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||
Sbjct: 91537 tgattggtgctgatgagaccatatactcaaactatggcgatacattgcagtggttagaaa 91596
Query: 739 atacagatgttcttggaatgatcgcagataagtttagctcatcgg 783
|||||||||| |||| |||||| || |||||||||||||||||||
Sbjct: 91597 atacagatgtccttgaaatgattgctgataagtttagctcatcgg 91641
Score = 143 bits (72), Expect = 4e-30
Identities = 90/96 (93%)
Strand = Plus / Plus
Query: 782 ggactctcctgaagtgcatgccaatgctgccgaaattctttgtgctgtgactcgatgtgc 841
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 91836 ggactcccctgaagtgcatgccaatgctgccgaaattctttgtgccgtgactcgatgtgc 91895
Query: 842 acctccatctctcgctgcaaaaatatgcagtccaag 877
||||||||||| |||||||| |||||||| |||||
Sbjct: 91896 tcctccatctcttgctgcaaagatatgcagcccaag 91931
Score = 113 bits (57), Expect = 4e-21
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1578 agtgagtgggttgaatggcagacagatgttctggtcaggcgaaatgaggtggagaatgtt 1637
|||||||||||||| ||||| ||||||||||| |||| ||| ||||||||||||||||||
Sbjct: 94158 agtgagtgggttgactggcaaacagatgttctagtcaagcgtaatgaggtggagaatgtt 94217
Query: 1638 tatcattgggcttgtgg 1654
|||||||||||||||||
Sbjct: 94218 tatcattgggcttgtgg 94234
Score = 109 bits (55), Expect = 6e-20
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 476 agttaatggatttgcttttctcatttgtgaaacctgatcatccacacagcacattattat 535
|||||||||| ||||||||||||||||||||| | ||||||||||| |||||||| ||||
Sbjct: 90780 agttaatggaattgcttttctcatttgtgaaatccgatcatccacatagcacattgttat 90839
Query: 536 ctggttacttcagtaaggt 554
||||||||||||| |||||
Sbjct: 90840 ctggttacttcagcaaggt 90858
Score = 109 bits (55), Expect = 6e-20
Identities = 120/141 (85%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 1897 gttccctctttacaaattcaaattggttcacgtttgatggagagagaggtatcaatgacc 1956
||||||||||||||||||| |||||||| || |||||||||||||||||||| | |||||
Sbjct: 95130 gttccctctttacaaattcgaattggtttacatttgatggagagagaggtattactgacc 95189
Query: 1957 gtttagctgcctctgttccttcgtcctcacccaactctgaggaggcttccacagacatcg 2016
|||| |||| | ||||||||||| ||||| || || |||||| |||| |||||| |
Sbjct: 95190 gtttggctg---cggttccttcgtcttcacctaattcagaggagatttccccagacactg 95246
Query: 2017 aggaagttgatgatggtgaag 2037
||||| ||||||||||||||
Sbjct: 95247 aggaaactgatgatggtgaag 95267
Score = 107 bits (54), Expect = 2e-19
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 409 ttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccctagtagag 468
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 90608 ttcattgcttgtgagatatttacatgtgaaattgatgtcattttgaggaccctagtcgag 90667
Query: 469 gatgaa 474
||||||
Sbjct: 90668 gatgaa 90673
Score = 107 bits (54), Expect = 2e-19
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 1078 taggtaatttgctgaacttattggacacctctgctgctgaaaatgttttgcctacaactt 1137
|||| ||||||||||| |||||||| || |||| ||||||||||||||||||||| || |
Sbjct: 92563 taggcaatttgctgaagttattggatacttctgatgctgaaaatgttttgcctacgacat 92622
Query: 1138 atggatgtttacgcccacctctggggaaacatcg 1171
||||||||||||||||||| || || ||||||||
Sbjct: 92623 atggatgtttacgcccaccccttggaaaacatcg 92656
Score = 105 bits (53), Expect = 1e-18
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 1177 agattgtggagttcatctctgttttgctgacagttggtagtgaaactgctgaacaagagc 1236
||||||||||||||||||| ||| |||||||| |||| |||||||||||||| ||||||
Sbjct: 93503 agattgtggagttcatctcagttctgctgacaattggcagtgaaactgctgagaaagagc 93562
Query: 1237 tgatcagccaatcggcaataaagcg 1261
| ||||| |||||||||||||||||
Sbjct: 93563 ttatcaggcaatcggcaataaagcg 93587
Score = 93.7 bits (47), Expect = 4e-15
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 1482 aaaattgggaatgttggtcacatgacaagaatagccaataaactcattcagttgggaaat 1541
|||||||||||| |||||||||||||||||||| |||| || || |||||||||||||
Sbjct: 93959 aaaattgggaatattggtcacatgacaagaataaccaacaagcttattcagttgggaagc 94018
Query: 1542 agtaatagcacaatccagactcacctgcagg 1572
||||| |||||||||||| |||| ||||||
Sbjct: 94019 agtaacggcacaatccagattcacttgcagg 94049
Score = 91.7 bits (46), Expect = 1e-14
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1825 aggatgtctattttgatgacgaatcagctgaggtggtaatatcttccctgcgtctgggag 1884
||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 94974 aggatgtctattttgatgatgaatcagcagaggtcgtaatatcttcactgcgactgggag 95033
Query: 1885 atgatc 1890
||||||
Sbjct: 95034 atgatc 95039
Score = 79.8 bits (40), Expect = 5e-11
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1825 aggatgtctattttgatgacgaatcagctgaggtggtaatatcttccctgcgtctgggag 1884
||||||||||||||||||| |||||||| ||||| ||||||| ||| ||||| |||||||
Sbjct: 107147 aggatgtctattttgatgatgaatcagcagaggtcgtaatatgttctctgcgactgggag 107206
Query: 1885 atga 1888
||||
Sbjct: 107207 atga 107210
Score = 79.8 bits (40), Expect = 5e-11
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 1825 aggatgtctattttgatgacgaatcagctgaggtggtaatatcttccctgcgtctgggag 1884
||||||||||||||||||| |||||||| ||||| ||||||| ||| ||||| |||||||
Sbjct: 117298 aggatgtctattttgatgatgaatcagcagaggtcgtaatatgttctctgcgactgggag 117239
Query: 1885 atga 1888
||||
Sbjct: 117238 atga 117235
Score = 75.8 bits (38), Expect = 9e-10
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 317 tgcgtgacaaggcccaggtcgaacaattgcttcgttatgttgttgaagaagttccggatg 376
||||||||| |||||||| || |||||||||||||||||||| |||||||| || ||||
Sbjct: 90434 tgcgtgacagagcccaggtggagcaattgcttcgttatgttgtggaagaagtaccagatg 90493
Query: 377 atgctg 382
||||||
Sbjct: 90494 atgctg 90499
Score = 71.9 bits (36), Expect = 1e-08
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 158 ccgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcccgtg 213
||||| ||||| ||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 88803 ccgcctccgccgccatgttctggcgcatgaccggcctgtccgcggcctcgcccgtg 88858
Score = 60.0 bits (30), Expect = 5e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 551 aggtggtaatttgtttgatgctgcggaagactgc 584
|||||||||| |||||||||||||||||||||||
Sbjct: 91026 aggtggtaatatgtttgatgctgcggaagactgc 91059
Score = 58.0 bits (29), Expect = 2e-04
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 610 catccagagatcgttgtccaacttgtcgacctgattgggatcacatctgtaatggag 666
|||||||| || ||||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 91394 catccagaaatagttgtccaactcgttgacctgattggcatcacatcaataatggag 91450
Score = 56.0 bits (28), Expect = 8e-04
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 2717 agcaaactgctgtacaataagca-agtgtacta-ttttgccttccattgtggccaatcac 2774
|||||||||||||||||||| | ||||||||| ||||||| |||||||||| | ||| |
Sbjct: 95837 agcaaactgctgtacaataaaaagagtgtactatttttgccatccattgtggtctatccc 95896
Query: 2775 tgtacaaa 2782
||||||||
Sbjct: 95897 tgtacaaa 95904
Score = 52.0 bits (26), Expect = 0.012
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 2584 aagcaaatgagtgaagtggcagcctatctcatggactgaaatggcatagctgac 2637
|||||||||||||||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 95709 aagcaaatgagtgaaggggcaggaaatctcatgggctaaaatggcatagttgac 95762
Score = 48.1 bits (24), Expect = 0.19
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1800 caagggtcacttgaacgggatgatgagg 1827
|||||| |||||||||||||||||||||
Sbjct: 94726 caagggacacttgaacgggatgatgagg 94753
Score = 48.1 bits (24), Expect = 0.19
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1800 caagggtcacttgaacgggatgatgagg 1827
|||||| |||||||||||||||||||||
Sbjct: 117549 caagggacacttgaacgggatgatgagg 117522
Score = 46.1 bits (23), Expect = 0.76
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1620 aatgaggtggagaatgtttatcattgggcttgtgg 1654
||||||||||||||| |||||||||||||||||
Sbjct: 106377 aatgaggtggagaattcgtatcattgggcttgtgg 106411
>gb|AC130728.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
complete sequence
Length = 142196
Score = 149 bits (75), Expect = 7e-32
Identities = 114/127 (89%)
Strand = Plus / Plus
Query: 1671 catgaccgtggtagggatagtgatgatgacgacttccgagacagggattatgatgttgca 1730
||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||| ||
Sbjct: 83890 catgatcgtggtagggatagcgatgatgatgacttccgagacagggactatgatgtggcg 83949
Query: 1731 gctctggccaataacttgagccaggcattccgctatgggatatacagcaatgatgacatt 1790
|| || || |||||| |||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 83950 gcacttgctaataacctgagccaggcattccggtatggaatgtacagcaatgatgacatt 84009
Query: 1791 gaagagg 1797
|||||||
Sbjct: 84010 gaagagg 84016
Score = 125 bits (63), Expect = 1e-24
Identities = 171/207 (82%)
Strand = Plus / Plus
Query: 876 agttttgttgggaggttgttctgccatgcccttgaaggatcaagacccaagtctgtgctg 935
|||||||||||||| || || | ||||| ||| ||| |||| | ||||| ||||| |||
Sbjct: 82135 agttttgttgggagattatttcgtcatgctcttcaagaatcacgccccaaatctgtcctg 82194
Query: 936 gttcattcattgtcagtgtgcatatctttactggacccaaaaagattggcatcagcttcc 995
||||||||||| ||||| || |||||||| |||| ||||||||| | || ||||| ||
Sbjct: 82195 gttcattcattatcagtatgtatatctttgttggatccaaaaagactagcgtcagcctca 82254
Query: 996 tatcaagcattcagaagcaatgtaagtcatggggcattggtcactgccagtcctgagaca 1055
|| |||||||| ||||| || | || |||||| ||||||| ||||| ||||| ||||||
Sbjct: 82255 taccaagcatttagaagtaacttgagccatgggacattggttactgctagtccagagaca 82314
Query: 1056 gttgatggtatgctcgagagtctaggt 1082
|||||||||||||| ||||| ||||||
Sbjct: 82315 gttgatggtatgctggagagcctaggt 82341
Score = 111 bits (56), Expect = 2e-20
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 211 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 270
||||||||||| ||||||||||| || || ||| | ||||||||||||||||||||||||
Sbjct: 79883 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 79942
Query: 271 attattcaagagtgcaaagcactgaacacccgactcataaattt 314
|| ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 79943 ataattcaggagtgcaaagcgctgaatactcgtctcataaattt 79986
Score = 105 bits (53), Expect = 1e-18
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 669 ctgatacgtctgattggtgctgatgagaccatatattcaaactatgctgatacaatgcag 728
||||| || ||||| |||||||||||||||||||| || || |||||||| ||| |||||
Sbjct: 81637 ctgattcgactgataggtgctgatgagaccatatactcgaattatgctgacacattgcag 81696
Query: 729 tggttagaaaatacagatgttcttggaatgatcgcagataagtttagctcatc 781
|||||||||||||||||||| || | |||||| | ||||| |||||||||||
Sbjct: 81697 tggttagaaaatacagatgtactggaaatgattgtggataaatttagctcatc 81749
Score = 101 bits (51), Expect = 1e-17
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 476 agttaatggatttgcttttctcatttgtgaaacctgatcatccacacagcacattattat 535
|||||||||||||||||||||||||||| | ||||| ||||||||| |||||||| |||
Sbjct: 80717 agttaatggatttgcttttctcatttgtaagacctggtcatccacatagcacattgttag 80776
Query: 536 ctggttacttcagtaaggt 554
|||| ||||||||||||||
Sbjct: 80777 ctggatacttcagtaaggt 80795
Score = 101 bits (51), Expect = 1e-17
Identities = 84/95 (88%)
Strand = Plus / Plus
Query: 789 cctgaagtgcatgccaatgctgccgaaattctttgtgctgtgactcgatgtgcacctcca 848
|||||||| || ||||||||||| |||||||||| ||| ||||||||||| || |||||
Sbjct: 81930 cctgaagtacacgccaatgctgcagaaattctttctgcagtgactcgatgcgcccctcct 81989
Query: 849 tctctcgctgcaaaaatatgcagtccaagttttgt 883
|||||||||||||||||||||| ||||| |||||
Sbjct: 81990 gctctcgctgcaaaaatatgcagcccaaggtttgt 82024
Score = 99.6 bits (50), Expect = 6e-17
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 1177 agattgtggagttcatctctgttttgctgacagttggtagtgaaactgctgaacaagagc 1236
|||||||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 83013 agattgtggaattcatctctgttttgctgacgattggtagtgaaactgcggaacaggagc 83072
Query: 1237 tgatcagccaatcggcaataaagcgctccattga 1270
| |||| |||||| ||| |||| || ||||||||
Sbjct: 83073 taatcaaccaatctgcagtaaaacgttccattga 83106
Score = 95.6 bits (48), Expect = 9e-16
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 402 gttccctttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccct 461
|||||| ||||||||||||||||||||||| |||||||| || |||| ||||||||| |
Sbjct: 80528 gttcccattcattgcttgtgagatatttacctgtgaaattgacatcatcttgaggacctt 80587
Query: 462 agtagaggatgaagag 477
||||||||||||||||
Sbjct: 80588 agtagaggatgaagag 80603
Score = 91.7 bits (46), Expect = 1e-14
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 1899 tccctctttacaaattcaaattggttcacgtttgatggagagagaggtatcaatgaccgt 1958
||||||||||| |||||||| ||||| || |||||||| || ||||| || |||||||||
Sbjct: 84591 tccctctttacgaattcaaactggtttacctttgatggtgatagaggaataaatgaccgt 84650
Query: 1959 ttagctgcctctgttccttcgtcctcacccaactctga 1996
|||||||||||||| ||||| || || ||||| |||||
Sbjct: 84651 ttagctgcctctgtcccttcttcatctcccaattctga 84688
Score = 71.9 bits (36), Expect = 1e-08
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 1575 aacagtgagtgggttgaatggcagacagatgttctggtcaggcgaaatgaggtggagaat 1634
||||| ||||||||||||||||||||| || ||||||| || |||||||| |||||
Sbjct: 83707 aacagcgagtgggttgaatggcagacaactgccctggtcaaacgcaatgaggttgagaac 83766
Query: 1635 gtttatcattgggcttgtgg 1654
|||||||||||||| |||||
Sbjct: 83767 gtttatcattgggcctgtgg 83786
Score = 69.9 bits (35), Expect = 5e-08
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 159 cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcc 209
||||| |||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 78773 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgcc 78823
Score = 69.9 bits (35), Expect = 5e-08
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 1825 aggatgtctattttgatgacgaatcagctgaggtggtaatatcttccctgcgtctgggag 1884
|||||||||| |||||||| ||||||||||| || ||||||||||| ||||| |||| |
Sbjct: 84439 aggatgtctactttgatgatgaatcagctgaagtagtaatatcttcgttgcgtttgggtg 84498
Query: 1885 atgatccggac 1895
|||||| ||||
Sbjct: 84499 atgatcaggac 84509
Score = 67.9 bits (34), Expect = 2e-07
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1078 taggtaatttgctgaacttattggacacctctgctgctgaaaatgttttgcctacaactt 1137
||||| |||||||||| || ||||| | ||| |||||||||||||||| |||||||| |
Sbjct: 82533 taggtgatttgctgaagttgttggatatttcttctgctgaaaatgttttacctacaacat 82592
Query: 1138 atggatgttt 1147
||||||||||
Sbjct: 82593 atggatgttt 82602
Score = 58.0 bits (29), Expect = 2e-04
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 1480 caaaaattgggaatgttggtcacatgacaagaatagccaataaactcattcagttgggaa 1539
|||||||||||||| |||| ||||| || ||||||| ||||| || ||||| ||||||
Sbjct: 83491 caaaaattgggaatattgggcacataactcgaatagctaataagcttattcaactgggaa 83550
Query: 1540 atagtaatagcacaatccagactca 1564
|||| || |||| ||||||| ||||
Sbjct: 83551 atagcaacagcataatccagtctca 83575
Score = 56.0 bits (28), Expect = 8e-04
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 1283 gtacccgtacaacaactttttgcaccatcatgtcgagaatataattgtttcttgcctgga 1342
|||||| ||||| |||||| |||||||||||||||||| ||| || ||||||| |||||
Sbjct: 83194 gtacccttacaataactttctgcaccatcatgtcgagagtattatcatttcttgtctgga 83253
Score = 50.1 bits (25), Expect = 0.049
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 551 aggtggtaatttgtttgatgctgcggaagactgccccattaatgaattatgttcagg 607
|||||||||| |||||||||||| | |||||| |||| ||||||| ||||| ||||
Sbjct: 80955 aggtggtaatatgtttgatgctgagaaagacttcccctctaatgaactatgtccagg 81011
>dbj|AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
Length = 29737217
Score = 149 bits (75), Expect = 7e-32
Identities = 114/127 (89%)
Strand = Plus / Plus
Query: 1671 catgaccgtggtagggatagtgatgatgacgacttccgagacagggattatgatgttgca 1730
||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||| ||
Sbjct: 29305233 catgatcgtggtagggatagcgatgatgatgacttccgagacagggactatgatgtggcg 29305292
Query: 1731 gctctggccaataacttgagccaggcattccgctatgggatatacagcaatgatgacatt 1790
|| || || |||||| |||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 29305293 gcacttgctaataacctgagccaggcattccggtatggaatgtacagcaatgatgacatt 29305352
Query: 1791 gaagagg 1797
|||||||
Sbjct: 29305353 gaagagg 29305359
Score = 125 bits (63), Expect = 1e-24
Identities = 171/207 (82%)
Strand = Plus / Plus
Query: 876 agttttgttgggaggttgttctgccatgcccttgaaggatcaagacccaagtctgtgctg 935
|||||||||||||| || || | ||||| ||| ||| |||| | ||||| ||||| |||
Sbjct: 29303478 agttttgttgggagattatttcgtcatgctcttcaagaatcacgccccaaatctgtcctg 29303537
Query: 936 gttcattcattgtcagtgtgcatatctttactggacccaaaaagattggcatcagcttcc 995
||||||||||| ||||| || |||||||| |||| ||||||||| | || ||||| ||
Sbjct: 29303538 gttcattcattatcagtatgtatatctttgttggatccaaaaagactagcgtcagcctca 29303597
Query: 996 tatcaagcattcagaagcaatgtaagtcatggggcattggtcactgccagtcctgagaca 1055
|| |||||||| ||||| || | || |||||| ||||||| ||||| ||||| ||||||
Sbjct: 29303598 taccaagcatttagaagtaacttgagccatgggacattggttactgctagtccagagaca 29303657
Query: 1056 gttgatggtatgctcgagagtctaggt 1082
|||||||||||||| ||||| ||||||
Sbjct: 29303658 gttgatggtatgctggagagcctaggt 29303684
Score = 111 bits (56), Expect = 2e-20
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 211 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 270
||||||||||| ||||||||||| || || ||| | ||||||||||||||||||||||||
Sbjct: 29301226 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 29301285
Query: 271 attattcaagagtgcaaagcactgaacacccgactcataaattt 314
|| ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 29301286 ataattcaggagtgcaaagcgctgaatactcgtctcataaattt 29301329
Score = 105 bits (53), Expect = 1e-18
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 669 ctgatacgtctgattggtgctgatgagaccatatattcaaactatgctgatacaatgcag 728
||||| || ||||| |||||||||||||||||||| || || |||||||| ||| |||||
Sbjct: 29302980 ctgattcgactgataggtgctgatgagaccatatactcgaattatgctgacacattgcag 29303039
Query: 729 tggttagaaaatacagatgttcttggaatgatcgcagataagtttagctcatc 781
|||||||||||||||||||| || | |||||| | ||||| |||||||||||
Sbjct: 29303040 tggttagaaaatacagatgtactggaaatgattgtggataaatttagctcatc 29303092
Score = 101 bits (51), Expect = 1e-17
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 476 agttaatggatttgcttttctcatttgtgaaacctgatcatccacacagcacattattat 535
|||||||||||||||||||||||||||| | ||||| ||||||||| |||||||| |||
Sbjct: 29302060 agttaatggatttgcttttctcatttgtaagacctggtcatccacatagcacattgttag 29302119
Query: 536 ctggttacttcagtaaggt 554
|||| ||||||||||||||
Sbjct: 29302120 ctggatacttcagtaaggt 29302138
Score = 101 bits (51), Expect = 1e-17
Identities = 84/95 (88%)
Strand = Plus / Plus
Query: 789 cctgaagtgcatgccaatgctgccgaaattctttgtgctgtgactcgatgtgcacctcca 848
|||||||| || ||||||||||| |||||||||| ||| ||||||||||| || |||||
Sbjct: 29303273 cctgaagtacacgccaatgctgcagaaattctttctgcagtgactcgatgcgcccctcct 29303332
Query: 849 tctctcgctgcaaaaatatgcagtccaagttttgt 883
|||||||||||||||||||||| ||||| |||||
Sbjct: 29303333 gctctcgctgcaaaaatatgcagcccaaggtttgt 29303367
Score = 99.6 bits (50), Expect = 6e-17
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 1177 agattgtggagttcatctctgttttgctgacagttggtagtgaaactgctgaacaagagc 1236
|||||||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 29304356 agattgtggaattcatctctgttttgctgacgattggtagtgaaactgcggaacaggagc 29304415
Query: 1237 tgatcagccaatcggcaataaagcgctccattga 1270
| |||| |||||| ||| |||| || ||||||||
Sbjct: 29304416 taatcaaccaatctgcagtaaaacgttccattga 29304449
Score = 95.6 bits (48), Expect = 9e-16
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 402 gttccctttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccct 461
|||||| ||||||||||||||||||||||| |||||||| || |||| ||||||||| |
Sbjct: 29301871 gttcccattcattgcttgtgagatatttacctgtgaaattgacatcatcttgaggacctt 29301930
Query: 462 agtagaggatgaagag 477
||||||||||||||||
Sbjct: 29301931 agtagaggatgaagag 29301946
Score = 91.7 bits (46), Expect = 1e-14
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 1899 tccctctttacaaattcaaattggttcacgtttgatggagagagaggtatcaatgaccgt 1958
||||||||||| |||||||| ||||| || |||||||| || ||||| || |||||||||
Sbjct: 29305934 tccctctttacgaattcaaactggtttacctttgatggtgatagaggaataaatgaccgt 29305993
Query: 1959 ttagctgcctctgttccttcgtcctcacccaactctga 1996
|||||||||||||| ||||| || || ||||| |||||
Sbjct: 29305994 ttagctgcctctgtcccttcttcatctcccaattctga 29306031
Score = 71.9 bits (36), Expect = 1e-08
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 1575 aacagtgagtgggttgaatggcagacagatgttctggtcaggcgaaatgaggtggagaat 1634
||||| ||||||||||||||||||||| || ||||||| || |||||||| |||||
Sbjct: 29305050 aacagcgagtgggttgaatggcagacaactgccctggtcaaacgcaatgaggttgagaac 29305109
Query: 1635 gtttatcattgggcttgtgg 1654
|||||||||||||| |||||
Sbjct: 29305110 gtttatcattgggcctgtgg 29305129
Score = 69.9 bits (35), Expect = 5e-08
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 159 cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcc 209
||||| |||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 29300116 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgcc 29300166
Score = 69.9 bits (35), Expect = 5e-08
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 1825 aggatgtctattttgatgacgaatcagctgaggtggtaatatcttccctgcgtctgggag 1884
|||||||||| |||||||| ||||||||||| || ||||||||||| ||||| |||| |
Sbjct: 29305782 aggatgtctactttgatgatgaatcagctgaagtagtaatatcttcgttgcgtttgggtg 29305841
Query: 1885 atgatccggac 1895
|||||| ||||
Sbjct: 29305842 atgatcaggac 29305852
Score = 67.9 bits (34), Expect = 2e-07
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1078 taggtaatttgctgaacttattggacacctctgctgctgaaaatgttttgcctacaactt 1137
||||| |||||||||| || ||||| | ||| |||||||||||||||| |||||||| |
Sbjct: 29303876 taggtgatttgctgaagttgttggatatttcttctgctgaaaatgttttacctacaacat 29303935
Query: 1138 atggatgttt 1147
||||||||||
Sbjct: 29303936 atggatgttt 29303945
Score = 58.0 bits (29), Expect = 2e-04
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 1480 caaaaattgggaatgttggtcacatgacaagaatagccaataaactcattcagttgggaa 1539
|||||||||||||| |||| ||||| || ||||||| ||||| || ||||| ||||||
Sbjct: 29304834 caaaaattgggaatattgggcacataactcgaatagctaataagcttattcaactgggaa 29304893
Query: 1540 atagtaatagcacaatccagactca 1564
|||| || |||| ||||||| ||||
Sbjct: 29304894 atagcaacagcataatccagtctca 29304918
Score = 56.0 bits (28), Expect = 8e-04
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 1283 gtacccgtacaacaactttttgcaccatcatgtcgagaatataattgtttcttgcctgga 1342
|||||| ||||| |||||| |||||||||||||||||| ||| || ||||||| |||||
Sbjct: 29304537 gtacccttacaataactttctgcaccatcatgtcgagagtattatcatttcttgtctgga 29304596
Score = 50.1 bits (25), Expect = 0.049
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 551 aggtggtaatttgtttgatgctgcggaagactgccccattaatgaattatgttcagg 607
|||||||||| |||||||||||| | |||||| |||| ||||||| ||||| ||||
Sbjct: 29302298 aggtggtaatatgtttgatgctgagaaagacttcccctctaatgaactatgtccagg 29302354
>ref|NM_001060441.1 | Oryza sativa (japonica cultivar-group) Os04g0620400 (Os04g0620400)
mRNA, partial cds
Length = 2331
Score = 71.9 bits (36), Expect = 1e-08
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 211 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 270
|||||||| || |||||||||||||||| | | || || |||||||| |||||||||
Sbjct: 387 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 446
Query: 271 attattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaa 326
|| || || |||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 447 ataatccaggagtgcaaagcactaaacacccgcctaatcaattttctgcgggacaa 502
Score = 67.9 bits (34), Expect = 2e-07
Identities = 253/326 (77%)
Strand = Plus / Plus
Query: 768 aagtttagctcatcggactctcctgaagtgcatgccaatgctgccgaaattctttgtgct 827
||||| || ||||| || |||||||| || ||||| || ||||| ||||| ||||||||
Sbjct: 945 aagttcagttcatctgattctcctgaggttcatgcaaacgctgctgaaatcctttgtgcg 1004
Query: 828 gtgactcgatgtgcacctccatctctcgctgcaaaaatatgcagtccaagttttgttggg 887
| ||| ||| ||| || ||| | || ||| ||||||||| |||| |||||||||| | |
Sbjct: 1005 ataactagatatgccccaccagcgcttgctacaaaaatatccagtgcaagttttgtggcg 1064
Query: 888 aggttgttctgccatgcccttgaaggatcaagacccaagtctgtgctggttcattcattg 947
|| | || |||||| |||||| ||||| || || || ||| |||| || ||||||
Sbjct: 1065 agactatttcaccatgcttttgaagattcaaggcctaaatcggtgttggtccactcattg 1124
Query: 948 tcagtgtgcatatctttactggacccaaaaagattggcatcagcttcctatcaagcattc 1007
||||||||||||||||| |||| || || ||| | | || ||||||||| |||| |||
Sbjct: 1125 tcagtgtgcatatctttgttggatcctaagagacttgtattagcttcctaccaagttttc 1184
Query: 1008 agaagcaatgtaagtcatggggcattggtcactgccagtcctgagacagttgatggtatg 1067
| || | |||| |||| ||||||||||||| ||||| |||||||||| ||| |||
Sbjct: 1185 cgtagtcaactaagccatgcaacattggtcactgcaagtccagagacagttggtggcatg 1244
Query: 1068 ctcgagagtctaggtaatttgctgaa 1093
|| || || |||||| ||||| ||||
Sbjct: 1245 ctggatagcctaggtgatttgttgaa 1270
Score = 60.0 bits (30), Expect = 5e-05
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 1632 aatgtttatcattgggcttgtggacggccaacctcgcttcatgaccgtggtagggatagt 1691
|||||||| || ||||||||||| |||||||| | || || || || |||||||| |||
Sbjct: 1809 aatgtttaccagtgggcttgtggccggccaacaacactgcaggatcgaggtagggacagt 1868
Query: 1692 gatgatgacgacttccgagacagggattatgatgttgc 1729
||||| || ||||| ||||| ||||| || ||||||||
Sbjct: 1869 gatgaagaagactttcgagatagggactacgatgttgc 1906
Score = 50.1 bits (25), Expect = 0.049
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1272 ctattctttgagtacccgtacaacaactttttgcaccatcatgtcgaga 1320
||||| ||||||||||| | ||||||||||||||||| ||||| ||||
Sbjct: 1449 ctattttttgagtacccttttaacaactttttgcaccaccatgtggaga 1497
Score = 46.1 bits (23), Expect = 0.76
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 415 gcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccctagtagaggatgaa 474
|||||||| |||||||| |||||| | |||||||| ||| ||| |||| ||| |||||
Sbjct: 591 gcttgtgaaatatttacatgtgaagtggatgtcataatgaagacattagtggagaatgaa 650
Query: 475 gagttaatggatttgcttttctc 497
|| | ||||| |||||||||||
Sbjct: 651 gatctcatggacttgcttttctc 673
>dbj|AK066330.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013061K16, full
insert sequence
Length = 2332
Score = 71.9 bits (36), Expect = 1e-08
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 211 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 270
|||||||| || |||||||||||||||| | | || || |||||||| |||||||||
Sbjct: 388 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 447
Query: 271 attattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaa 326
|| || || |||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 448 ataatccaggagtgcaaagcactaaacacccgcctaatcaattttctgcgggacaa 503
Score = 67.9 bits (34), Expect = 2e-07
Identities = 253/326 (77%)
Strand = Plus / Plus
Query: 768 aagtttagctcatcggactctcctgaagtgcatgccaatgctgccgaaattctttgtgct 827
||||| || ||||| || |||||||| || ||||| || ||||| ||||| ||||||||
Sbjct: 946 aagttcagttcatctgattctcctgaggttcatgcaaacgctgctgaaatcctttgtgcg 1005
Query: 828 gtgactcgatgtgcacctccatctctcgctgcaaaaatatgcagtccaagttttgttggg 887
| ||| ||| ||| || ||| | || ||| ||||||||| |||| |||||||||| | |
Sbjct: 1006 ataactagatatgccccaccagcgcttgctacaaaaatatccagtgcaagttttgtggcg 1065
Query: 888 aggttgttctgccatgcccttgaaggatcaagacccaagtctgtgctggttcattcattg 947
|| | || |||||| |||||| ||||| || || || ||| |||| || ||||||
Sbjct: 1066 agactatttcaccatgcttttgaagattcaaggcctaaatcggtgttggtccactcattg 1125
Query: 948 tcagtgtgcatatctttactggacccaaaaagattggcatcagcttcctatcaagcattc 1007
||||||||||||||||| |||| || || ||| | | || ||||||||| |||| |||
Sbjct: 1126 tcagtgtgcatatctttgttggatcctaagagacttgtattagcttcctaccaagttttc 1185
Query: 1008 agaagcaatgtaagtcatggggcattggtcactgccagtcctgagacagttgatggtatg 1067
| || | |||| |||| ||||||||||||| ||||| |||||||||| ||| |||
Sbjct: 1186 cgtagtcaactaagccatgcaacattggtcactgcaagtccagagacagttggtggcatg 1245
Query: 1068 ctcgagagtctaggtaatttgctgaa 1093
|| || || |||||| ||||| ||||
Sbjct: 1246 ctggatagcctaggtgatttgttgaa 1271
Score = 60.0 bits (30), Expect = 5e-05
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 1632 aatgtttatcattgggcttgtggacggccaacctcgcttcatgaccgtggtagggatagt 1691
|||||||| || ||||||||||| |||||||| | || || || || |||||||| |||
Sbjct: 1810 aatgtttaccagtgggcttgtggccggccaacaacactgcaggatcgaggtagggacagt 1869
Query: 1692 gatgatgacgacttccgagacagggattatgatgttgc 1729
||||| || ||||| ||||| ||||| || ||||||||
Sbjct: 1870 gatgaagaagactttcgagatagggactacgatgttgc 1907
Score = 50.1 bits (25), Expect = 0.049
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1272 ctattctttgagtacccgtacaacaactttttgcaccatcatgtcgaga 1320
||||| ||||||||||| | ||||||||||||||||| ||||| ||||
Sbjct: 1450 ctattttttgagtacccttttaacaactttttgcaccaccatgtggaga 1498
Score = 46.1 bits (23), Expect = 0.76
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 415 gcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccctagtagaggatgaa 474
|||||||| |||||||| |||||| | |||||||| ||| ||| |||| ||| |||||
Sbjct: 592 gcttgtgaaatatttacatgtgaagtggatgtcataatgaagacattagtggagaatgaa 651
Query: 475 gagttaatggatttgcttttctc 497
|| | ||||| |||||||||||
Sbjct: 652 gatctcatggacttgcttttctc 674
>dbj|AP004505.1 | Lotus japonicus genomic DNA, chromosome 3, clone:LjT10E18, TM0035,
complete sequence
Length = 106041
Score = 60.0 bits (30), Expect = 5e-05
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1683 agggatagtgatgatgacgacttccgagacagggattatgatgttgcagctctggccaat 1742
||||| ||||||||||| ||| | | |||||||| ||||||||||||||| | ||||||
Sbjct: 40071 agggacagtgatgatgatgaccttcatgacagggactatgatgttgcagctttagccaat 40130
Query: 1743 aacttgagccaggc 1756
|| ||||| |||||
Sbjct: 40131 aatttgagtcaggc 40144
Score = 56.0 bits (28), Expect = 8e-04
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 412 attgcttgtgagatatttacttgtgaaatcgatgtcattttgaggacc 459
|||||||||||||| || || |||||||| ||||||||||||| ||||
Sbjct: 34496 attgcttgtgagattttcacatgtgaaattgatgtcattttgaagacc 34543
>gb|U63815.1 |ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, AT.I.24-3, AT.I.24-4,
AT.I.24-5, AT.I.24-6, AT.I.24-9 and AT.I.24-14 genes,
partial cds, AT.I.24-7, ascorbate peroxidase (ATHAPX1),
EF-1alpha-A1, -A2 and -A3 (EF-1alpha) and AT.I.24-13
genes, complete cds
Length = 63093
Score = 48.1 bits (24), Expect = 0.19
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 224 tagacaaggaaaattttacacttgaagaacttcttgacgaggatgaaattattcaagagt 283
||||||| |||||||| || | ||||| |||||||| ||||| || ||||||||||| |
Sbjct: 62156 tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 62215
Query: 284 gcaa 287
||||
Sbjct: 62216 gcaa 62219
>dbj|AP000213.1 | Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
f43D11-119B8, segment 11/12, complete sequence
Length = 100000
Score = 44.1 bits (22), Expect = 3.0
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 486 tttgcttttctcatttgtgaaa 507
||||||||||||||||||||||
Sbjct: 44714 tttgcttttctcatttgtgaaa 44693
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 572,801,752
Number of extensions: 30157627
Number of successful extensions: 177829
Number of sequences better than 10.0: 52
Number of HSP's gapped: 177812
Number of HSP's successfully gapped: 184
Length of query: 3097
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 3074
Effective length of database: 18,503,978,556
Effective search space: 56881230081144
Effective search space used: 56881230081144
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)