| Clone Name | FLbaf5d15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK109704:Os12g0256400 | 30 | 0.44 | 2 | AJ428900:Os02g0551400 | 29 | 1.3 | 3 | AK068448:Os02g0551400 | 29 | 1.3 | 4 | AK110040: | 28 | 2.2 | 5 | Os08g0249400:Os08g0249400 | 27 | 4.9 | 6 | Os06g0239700:Os06g0239700 | 27 | 4.9 | 7 | Os05g0552600:Os05g0552600 | 27 | 6.3 | 8 | AK110427: | 27 | 6.3 | 9 | AK099945:Os01g0889900 | 27 | 6.3 | 10 | AK068204:Os01g0254900 | 27 | 6.3 | 11 | Os07g0695700:Os07g0695700 | 26 | 8.3 | 12 | Os07g0453000:Os07g0453000 | 26 | 8.3 | 13 | AK108523:Os12g0472500 | 26 | 8.3 |
|---|
>AK109704:Os12g0256400 | Length = 272 Score = 30.4 bits (67), Expect = 0.44 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%) Frame = +1 Query: 31 RTQRSHRQTEAMAGAGGSLP---PSEVAPRCWACNW 129 R++ H Q +A LP P + P CWAC W Sbjct: 69 RSRMRHMQQPKVASTAPPLPKPPPRGLRPSCWACRW 104
>AJ428900:Os02g0551400 | Length = 665 Score = 28.9 bits (63), Expect = 1.3 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = +2 Query: 155 SIPRMATCPPPAFSIPCPLSVSPTQVLLPFALSHVLPTLDCTP 283 S+ + P P +P P+ V P QV LP H P P Sbjct: 277 SVTAPSPLPVPVHVVPVPVPVQPVQVQLPPPQLHQAPAQSAPP 319
>AK068448:Os02g0551400 | Length = 719 Score = 28.9 bits (63), Expect = 1.3 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = +2 Query: 155 SIPRMATCPPPAFSIPCPLSVSPTQVLLPFALSHVLPTLDCTP 283 S+ + P P +P P+ V P QV LP H P P Sbjct: 331 SVTAPSPLPVPVHVVPVPVPVQPVQVQLPPPQLHQAPAQSAPP 373
>AK110040: | Length = 1332 Score = 28.1 bits (61), Expect = 2.2 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -3 Query: 393 TAHTPFLFQEIPILSLEPKRERPQSQTYLHAILHMQQGVQS 271 TA P+L +P L+ + R+R +S ++LH + G S Sbjct: 825 TASDPYLDNGMPALTRQHYRDRSRSSSHLHVLTGADTGYDS 865
>Os08g0249400:Os08g0249400 | Length = 315 Score = 26.9 bits (58), Expect = 4.9 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = +2 Query: 161 PRMATCPPP-----AFSIPCPLSVSPTQVLLPFALSHVLPTLDCTPC 286 P PPP A+S+P SP+ V P A + V T D PC Sbjct: 189 PGYIAAPPPYNHYAAYSVPPVAMTSPSPVPGPTAYAPVQNTKDNPPC 235
>Os06g0239700:Os06g0239700 | Length = 247 Score = 26.9 bits (58), Expect = 4.9 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +2 Query: 170 ATCPPPAFSIPCPLSVSPTQVLLPFALSHVLPTLDCTP 283 A+ P PA P P S SP+ +LP L H +P + TP Sbjct: 33 ASAPAPA---PAPGSTSPSPDVLPEILRHAVP-IKATP 66
>Os05g0552600:Os05g0552600 | Length = 510 Score = 26.6 bits (57), Expect = 6.3 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 161 PRMATCPPPAFSIPCPLSVSPTQVLLP 241 PR + PPP +S P P+S P V P Sbjct: 96 PRSSPPPPPVYSPPPPVSSPPPPVPSP 122
>AK110427: | Length = 334 Score = 26.6 bits (57), Expect = 6.3 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -3 Query: 123 ASPAPRRNLGGREGAASAS 67 +SP P +N GGR G+AS+S Sbjct: 180 SSPNPNKNGGGRAGSASSS 198
>AK099945:Os01g0889900 | Length = 826 Score = 26.6 bits (57), Expect = 6.3 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Frame = -2 Query: 85 GSRQRQPWPLSV-CGSSEFVIPITCIL 8 G R+R+PW S CGS ++ I+C+L Sbjct: 6 GGRRRRPWSSSSSCGSPFLMMLISCLL 32
>AK068204:Os01g0254900 | Length = 280 Score = 26.6 bits (57), Expect = 6.3 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -3 Query: 111 PRRNLGGREGAASASHGLCLSVA 43 PRR GGR GAA+A G +VA Sbjct: 15 PRRGGGGRAGAAAAGAGASQAVA 37
>Os07g0695700:Os07g0695700 | Length = 248 Score = 26.2 bits (56), Expect = 8.3 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +2 Query: 158 IPRMATCPPPAFSIPCPLSVSPTQVLLPFALSHVLPTLDCTP 283 +PR+ T PPP P L ++P H P L TP Sbjct: 57 VPRLLTTPPPPSPRPLQLQMAPR--------PHSSPNLTLTP 90
>Os07g0453000:Os07g0453000 | Length = 1079 Score = 26.2 bits (56), Expect = 8.3 Identities = 17/38 (44%), Positives = 19/38 (50%) Frame = +2 Query: 149 SSSIPRMATCPPPAFSIPCPLSVSPTQVLLPFALSHVL 262 SSS P PPPA S P P+ V LP AL +L Sbjct: 108 SSSAPSAPAAPPPASSPPDPV------VSLPPALEAIL 139
>AK108523:Os12g0472500 | Length = 226 Score = 26.2 bits (56), Expect = 8.3 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +2 Query: 179 PPPAFSIPCPLSVSPTQVLLPFALS 253 PPP + P P +VSP P LS Sbjct: 51 PPPPLAAPVPAAVSPAPATPPAVLS 75 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,083,011 Number of extensions: 309787 Number of successful extensions: 1069 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1068 Number of HSP's successfully gapped: 13 Length of query: 138 Length of database: 15,399,855 Length adjustment: 90 Effective length of query: 48 Effective length of database: 11,796,165 Effective search space: 566215920 Effective search space used: 566215920 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)