ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5c11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103734:Os09g0515400 | 229 | 3e-60 | 2 | AK104876:Os01g0894700 | 94 | 1e-19 | 3 | AK067623:Os01g0894700 | 94 | 1e-19 | 4 | Os03g0604600:Os03g0604600 | 28 | 7.1 | 5 | AK102243:Os04g0521600 | 28 | 9.2 | 6 | Os04g0645900:Os04g0645900 | 28 | 9.3 | 7 | Os01g0679500:Os01g0679500 | 28 | 9.3 | 8 | AK119518:Os07g0620300 | 28 | 9.3 | 9 | AK099150:Os07g0620300 | 28 | 9.3 | 10 | AK099000:Os07g0620300 | 28 | 9.3 | 11 | AK059588:Os07g0620300 | 28 | 9.3 |
|---|
>AK103734:Os09g0515400 | Length = 209 Score = 229 bits (583), Expect = 3e-60 Identities = 118/213 (55%), Positives = 151/213 (70%), Gaps = 2/213 (0%) Frame = +2 Query: 41 MELSISMGGSAAGTSLV--NLKMVNHKCTRGLGRQLQFLHDVPSSVCLMILHNKCSKRIS 214 MELSI+ A L+ N KM+NH+ +Q H + S C ++ + +CS RI+ Sbjct: 1 MELSIAPAAMAMAMGLLAKNPKMINHR----YASDMQLQHRL-SPACSVMFNKQCSYRIT 55 Query: 215 HKVCRALQELSPVQCTENPTQAPIAFKDFHVSVLTEEDGVIEIRVTISSKMTDSVFEKVL 394 K C L +SP+QCTE T++ ++FKDF VSV TEEDG+I++RVT++ MT+S+FEKV Sbjct: 56 RKACSVLGAVSPIQCTETSTESLVSFKDFLVSVQTEEDGLIKLRVTVADTMTESIFEKVF 115 Query: 395 SKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSXXXXXXXXXXXXXXXXEYVEKENL 574 SK++AAAQPLPGFRR+KGGKT ++PKE+ALHLIGPS EYV+KE+L Sbjct: 116 SKNVAAAQPLPGFRRMKGGKTRDIPKEIALHLIGPSKVKKETIKNIISLTIAEYVQKEDL 175 Query: 575 DASKNLKVLQSYEELEAAFEPGKEFCFDAAVHL 673 DASKNLKVLQ+YEELEAAFEPGKEFCFDA HL Sbjct: 176 DASKNLKVLQTYEELEAAFEPGKEFCFDATFHL 208
>AK104876:Os01g0894700 | Length = 229 Score = 94.0 bits (232), Expect = 1e-19 Identities = 45/137 (32%), Positives = 75/137 (54%) Frame = +2 Query: 263 ENPTQAPIAFKDFHVSVLTEEDGVIEIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRL 442 E+ ++ ++ ++ SV++ +D I +RV + K T VF++ L+ A P+PGFR+ Sbjct: 71 EDERKSGLSLQNAKTSVVSRDDETINVRVDLPGKATQKVFDEALTSLARDAPPVPGFRKS 130 Query: 443 KGGKTPNVPKEVALHLIGPSXXXXXXXXXXXXXXXXEYVEKENLDASKNLKVLQSYEELE 622 KGG+T N+P + L ++G S ++V+KENL + +K QS EELE Sbjct: 131 KGGRTSNIPSSILLQMLGKSRVTKFVLQEILSITVGDFVKKENLKVNPEIKTTQSEEELE 190 Query: 623 AAFEPGKEFCFDAAVHL 673 ++F PG F F + L Sbjct: 191 SSFTPGSSFSFSVVLQL 207
>AK067623:Os01g0894700 | Length = 229 Score = 94.0 bits (232), Expect = 1e-19 Identities = 45/137 (32%), Positives = 75/137 (54%) Frame = +2 Query: 263 ENPTQAPIAFKDFHVSVLTEEDGVIEIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRL 442 E+ ++ ++ ++ SV++ +D I +RV + K T VF++ L+ A P+PGFR+ Sbjct: 71 EDERKSGLSLQNAKTSVVSRDDETINVRVDLPGKATQKVFDEALTSLARDAPPVPGFRKS 130 Query: 443 KGGKTPNVPKEVALHLIGPSXXXXXXXXXXXXXXXXEYVEKENLDASKNLKVLQSYEELE 622 KGG+T N+P + L ++G S ++V+KENL + +K QS EELE Sbjct: 131 KGGRTSNIPSSILLQMLGKSRVTKFVLQEILSITVGDFVKKENLKVNPEIKTTQSEEELE 190 Query: 623 AAFEPGKEFCFDAAVHL 673 ++F PG F F + L Sbjct: 191 SSFTPGSSFSFSVVLQL 207
>Os03g0604600:Os03g0604600 | Length = 931 Score = 28.5 bits (62), Expect = 7.1 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 16/53 (30%) Frame = -3 Query: 178 QAHRRRY---------VMQKLKLTSKAPGA--FVIHHL-----EIHEARSCGR 68 +AH RRY + K ++TS+ P F++ HL E+HEAR GR Sbjct: 370 RAHSRRYSTAASFVDVLQPKKEVTSELPSLDKFLVKHLSKLEKEVHEAREAGR 422
>AK102243:Os04g0521600 | Length = 771 Score = 28.1 bits (61), Expect = 9.2 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = +2 Query: 182 ILHNKCSKRISHKVCRALQ-ELSPVQCTENPTQAPIAFKDFHVSVLTEEDGVIEIRVTIS 358 I H + + I K+ ++ EL V +E V LTEE+G + IRV + Sbjct: 355 ICHEEVERLIEEKIDSEIRCELQHVLHSEIFRDLVRKLAVLDVQKLTEENGELNIRVELL 414 Query: 359 SKMTDSVFEKVLSK 400 ++ +VF+ ++SK Sbjct: 415 CEIYTTVFKDLVSK 428
>Os04g0645900:Os04g0645900 | Length = 520 Score = 28.1 bits (61), Expect = 9.3 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -1 Query: 912 NIKYNSDMSTTSQQNLLSASTKKQTSSSIHDHQDN 808 +IK SD S + L++ +SSS HDH DN Sbjct: 175 DIKAPSDGSPSMSDATLNSKVSDWSSSSFHDHGDN 209
>Os01g0679500:Os01g0679500 | Length = 484 Score = 28.1 bits (61), Expect = 9.3 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -1 Query: 480 ATSFGTFGVFPPFSRRNPGSGCAA 409 ATS+ TFG P FS R P G A+ Sbjct: 272 ATSYLTFGPNPAFSSRRPSEGTAS 295
>AK119518:Os07g0620300 | Length = 451 Score = 28.1 bits (61), Expect = 9.3 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = -1 Query: 510 FTFDGPIKC---RATSFGTFGVFPPFSRRNPGSGCAAAICFDKTFSKTESVILLLIVTRI 340 + F+ PI R G +F ++R PG+ ++ + K I + I+ RI Sbjct: 135 YIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTAVTKSVVATEPGGKKREEIFVDIIERI 194 Query: 339 SITPSSS 319 S+T SSS Sbjct: 195 SVTFSSS 201
>AK099150:Os07g0620300 | Length = 451 Score = 28.1 bits (61), Expect = 9.3 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = -1 Query: 510 FTFDGPIKC---RATSFGTFGVFPPFSRRNPGSGCAAAICFDKTFSKTESVILLLIVTRI 340 + F+ PI R G +F ++R PG+ ++ + K I + I+ RI Sbjct: 135 YIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTAVTKSVVATEPGGKKREEIFVDIIERI 194 Query: 339 SITPSSS 319 S+T SSS Sbjct: 195 SVTFSSS 201
>AK099000:Os07g0620300 | Length = 451 Score = 28.1 bits (61), Expect = 9.3 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = -1 Query: 510 FTFDGPIKC---RATSFGTFGVFPPFSRRNPGSGCAAAICFDKTFSKTESVILLLIVTRI 340 + F+ PI R G +F ++R PG+ ++ + K I + I+ RI Sbjct: 135 YIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTAVTKSVVATEPGGKKREEIFVDIIERI 194 Query: 339 SITPSSS 319 S+T SSS Sbjct: 195 SVTFSSS 201
>AK059588:Os07g0620300 | Length = 451 Score = 28.1 bits (61), Expect = 9.3 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = -1 Query: 510 FTFDGPIKC---RATSFGTFGVFPPFSRRNPGSGCAAAICFDKTFSKTESVILLLIVTRI 340 + F+ PI R G +F ++R PG+ ++ + K I + I+ RI Sbjct: 135 YIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTAVTKSVVATEPGGKKREEIFVDIIERI 194 Query: 339 SITPSSS 319 S+T SSS Sbjct: 195 SVTFSSS 201 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,206,815 Number of extensions: 504081 Number of successful extensions: 1311 Number of sequences better than 10.0: 11 Number of HSP's gapped: 1308 Number of HSP's successfully gapped: 11 Length of query: 311 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 211 Effective length of database: 11,395,755 Effective search space: 2404504305 Effective search space used: 2404504305 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
