ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf5c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os09g34000:12009.t02976:unspliced-genomic expressed protein 82 2e-45
2LOC_Os01g66980:12001.t06056:unspliced-genomic expressed protein 45 3e-09
3LOC_Os12g19960:12012.t01839:unspliced-genomic retrotransposo... 36 0.43
4LOC_Os11g34050:12011.t02958:unspliced-genomic retrotransposo... 35 0.60
5LOC_Os04g05430:12004.t00424:unspliced-genomic retrotransposo... 35 0.60
6LOC_Os02g12320:12002.t01030:unspliced-genomic retrotransposo... 35 0.60
7LOC_Os03g17410:12003.t01516:unspliced-genomic expressed protein 35 0.82
8LOC_Os10g21350:12010.t01624:unspliced-genomic retrotransposo... 35 0.82
9LOC_Os11g22880:12011.t01958:unspliced-genomic retrotransposo... 35 1.1
10LOC_Os03g07430:12003.t00606:unspliced-genomic serine/threoni... 30 1.2
11LOC_Os09g04410:12009.t00337:unspliced-genomic retrotransposo... 34 1.5
12LOC_Os01g54990:12001.t04912:unspliced-genomic auxin response... 34 2.1
13LOC_Os07g42810:12007.t03930:unspliced-genomic AP-4 complex s... 34 2.1
14LOC_Os01g58444:12001.t006874:unspliced-genomic expressed pro... 33 2.9
15LOC_Os06g13180:12006.t01193:unspliced-genomic metalloendopro... 33 2.9
16LOC_Os04g47560:12004.t04281:unspliced-genomic retrotransposo... 33 4.0
17LOC_Os08g21330:12008.t01929:unspliced-genomic formamidopyrim... 32 5.5
18LOC_Os04g04530:12004.t00339:unspliced-genomic retrotransposo... 32 5.5
19LOC_Os02g38710:12002.t03509:unspliced-genomic protein phosph... 32 5.5
20LOC_Os11g45908:12011.t04116:unspliced-genomic retrotransposo... 32 5.5
21LOC_Os01g03180:12001.t00210:unspliced-genomic pr5, putative,... 32 5.5
22LOC_Os05g13390:12005.t01117:unspliced-genomic expressed protein 29 5.6
23LOC_Os11g18194:12011.t01589:unspliced-genomic cycloartenol s... 32 7.5
24LOC_Os07g30310:12007.t02720:unspliced-genomic retrotransposo... 32 7.5
25LOC_Os07g28740:12007.t02564:unspliced-genomic retrotransposo... 32 7.5
26LOC_Os01g60860:12001.t05467:unspliced-genomic spotted leaf p... 32 7.6
27LOC_Os10g40324:12010.t03275:unspliced-genomic conserved hypo... 24 8.3

>LOC_Os09g34000:12009.t02976:unspliced-genomic expressed protein|
          Length = 2993
 Score = 82.2 bits (173), Expect(5) = 2e-45
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +2 / +1

                                                    
Query: 554  YVEKENLDASKNLKVLQSYEELEAAFEPGKEFCFDAAVHL 673
            +V +E+LDASKNLKVLQ+YEELEAAFEPGKEFCFDA  HL
Sbjct: 2440 FVLQEDLDASKNLKVLQTYEELEAAFEPGKEFCFDATFHL 2559



 Score = 71.6 bits (150), Expect(5) = 2e-45
 Identities = 26/39 (66%), Positives = 36/39 (92%)
 Frame = +2 / +2

                                                   
Query: 335  IEIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGG 451
            +++RVT++  MT+S+FEKV SK++AAAQPLPGFRR+KGG
Sbjct: 1406 MQLRVTVADTMTESIFEKVFSKNVAAAQPLPGFRRMKGG 1522



 Score = 47.8 bits (98), Expect(5) = 2e-45
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +3 / +3

                                           
Query: 465  YQKKSLCT*LDHQK*RKQPSRKSSMAQSLNM 557
            YQK+ LCT*L HQ+*RK+PSR SS +Q  NM
Sbjct: 2205 YQKRLLCT*LGHQR*RKKPSRISSASQLPNM 2297



 Score = 41.4 bits (84), Expect(5) = 2e-45
 Identities = 16/28 (57%), Positives = 23/28 (82%)
 Frame = +2 / +3

                                        
Query: 260  TENPTQAPIAFKDFHVSVLTEEDGVIEI 343
            TE  T++ ++FKDF VSV TEEDG+I++
Sbjct: 1182 TETSTESLVSFKDFLVSVQTEEDGLIKV 1265



 Score = 27.2 bits (53), Expect(5) = 2e-45
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +1 / +2

                              
Query: 208  NQP*SLQSASGIISSTMY 261
            N P*SLQ + G IS TMY
Sbjct: 1046 NHP*SLQCSWGSISDTMY 1099



 Score = 64.8 bits (135), Expect(5) = 2e-38
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = -1 / -3

                                             
Query: 558  TYSATAPLMIFLMAAFFTFDGPIKCRATSFGTF 460
            TYSA   LMIFLM +FFTFDGPIKCRA SFG F
Sbjct: 2298 TYSAIVRLMIFLMVSFFTFDGPIKCRAISFGIF 2200



 Score = 60.6 bits (126), Expect(5) = 2e-38
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = -1 / -3

                                                
Query: 450  PPFSRRNPGSGCAAAICFDKTFSKTESVILLLIVTR 343
            PPF RR PGSGCAAA  F+KTFSK +SVI+   VTR
Sbjct: 1521 PPFIRRKPGSGCAAATFFEKTFSKIDSVIVSATVTR 1414



 Score = 44.1 bits (90), Expect(5) = 2e-38
 Identities = 20/37 (54%), Positives = 26/37 (70%)
 Frame = -3 / -3

                                                 
Query: 673  *MDSSVKAEFFSRLERGLELLVALQNLQVLRCVEVLL 563
            *M S +KA+ FSR E   +LL+ L NLQ+  C+EVLL
Sbjct: 2559 *MKSCIKAKLFSRFECCFKLLIGL*NLQIF*CIEVLL 2449



 Score = 42.3 bits (86), Expect(5) = 2e-38
 Identities = 18/28 (64%), Positives = 19/28 (67%)
 Frame = -3 / -1

                                        
Query: 340  LYHSIFFSKHRHMKIFKGYWRLRGIFCT 257
            LY SI FS HRH KIF+ Y RL   FCT
Sbjct: 1262 LYQSILFSLHRHKKIFERY*RLCAGFCT 1179



 Score = 34.1 bits (68), Expect(5) = 2e-38
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -2 / -3

                               
Query: 263  LYIVLEIIPEALCKLYG*F 207
            +YIV EI+P+  CKLYG*F
Sbjct: 1101 VYIVSEILPQEHCKLYG*F 1045



 Score = 61.6 bits (128), Expect(5) = 3e-22
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -3 / -2

                                                  
Query: 574  EVLLLNIFSDCAIDDFLDGCFLHF*WSNQVQSDFFWYI 461
            ++ LL+IF +C  DD LDG FLH *W N VQS+ FWY+
Sbjct: 2314 QIYLLDIFGNCEADDILDGFFLHL*WPN*VQSNLFWYL 2201



 Score = 47.3 bits (97), Expect(5) = 3e-22
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = -3 / -2

                                                  
Query: 448  SFQSPKSWKWLCCGNML**DFLKDRIRHFTANSYSYLY 335
            SF S K+ KWLC  N+L* +FLKDR  H  + SYS L+
Sbjct: 1519 SFHSSKARKWLCSSNIL*ENFLKDRFCHCISYSYS*LH 1406



 Score = 29.0 bits (57), Expect(5) = 3e-22
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1 / -2

                            
Query: 336  ITPSSSVSTDT*KSLK 289
            I+PSSSV TDT KSLK
Sbjct: 1258 ISPSSSVCTDTRKSLK 1211



 Score = 27.2 bits (53), Expect(5) = 3e-22
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3 / -1

                                    
Query: 277  LRGIFCTLYWR*FLKRSANFMADS 206
            +RG  CTLY R   K +A+F  DS
Sbjct: 1115 IRG*MCTLYRRYCPKNTASFTGDS 1044



 Score = 24.4 bits (47), Expect(5) = 3e-22
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1 / -1

                     
Query: 660  ASKQNSFPG 634
            ASKQNSFPG
Sbjct: 2546 ASKQNSFPG 2520



 Score = 41.4 bits (84), Expect(5) = 3e-16
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1 / +1

                                    
Query: 466  TKRSRSALDWTIKSEESSHQENHQ 537
            TKR  SAL+W IK EE +HQE HQ
Sbjct: 2206 TKRDCSALNWAIKGEERNHQEYHQ 2277



 Score = 39.1 bits (79), Expect(5) = 3e-16
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = +3 / +3

                                                
Query: 342  YE*LLAVK*RILSLRKSYQSILPQHNHFQDFGD*KE 449
            YE*L  ++*+ LSLRK  Q +L  HNHF  F +*KE
Sbjct: 1413 YE*L*LIQ*QNLSLRKFSQRMLLLHNHFLAFDE*KE 1520



 Score = 32.7 bits (65), Expect(5) = 3e-16
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +3 / +1

                             
Query: 294  KIFMCLCLLKKME**RY 344
            KIF+CLC LK+M+**R+
Sbjct: 1216 KIFLCLCKLKRMD**RF 1266



 Score = 29.9 bits (59), Expect(5) = 3e-16
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2 / +3

                                              
Query: 206  RISHKVCRALQELSPVQCTENPTQAPIAFKDFHV 307
            RI+ K C  L  +SP+QCT   +   I     H+
Sbjct: 1044 RITRKACSVLGAVSPIQCTHLSSYYSIKICSEHI 1145



 Score = 25.4 bits (49), Expect(5) = 3e-16
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1 / +3

                                
Query: 598  SAKLRGARGRVRAWKRILL* 657
            S  L GA   +R WKR+LL*
Sbjct: 2484 STDL*GA*SSIRTWKRVLL* 2543



 Score = 36.8 bits (74), Expect(3) = 2e-08
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1 / +2

                                          
Query: 250  STMYRKSHAGANSL*RFSCVCAY*RRWSDR 339
            S  YR  H   +   RFSCVCA *R W+D+
Sbjct: 1172 SIRYRNQHRVFSIFQRFSCVCAN*RGWTDK 1261



 Score = 34.5 bits (69), Expect(3) = 2e-08
 Identities = 19/36 (52%), Positives = 21/36 (58%)
 Frame = +1 / +1

                                                
Query: 343  TSNY*Q*NDGFCL*ESLIKAYCRSTTTSRISATERR 450
            TSN    ND   L*ES +K  C  TTTS +S  ERR
Sbjct: 1414 TSNCS*YNDRIYL*ESFLKECCCCTTTSWLSTNERR 1521



 Score = 32.2 bits (64), Expect(3) = 2e-08
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +2 / +2

                         
Query: 464  VPKEVALHLIGPS 502
            +PKE+ALHLIGPS
Sbjct: 2204 IPKEIALHLIGPS 2242



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>LOC_Os01g66980:12001.t06056:unspliced-genomic expressed protein|
          Length = 2176

 Score = 44.6 bits (91), Expect(2) = 3e-09
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +2 / +2

                                                      
Query: 326  DGVIEIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGG 451
            D  +++RV +  K T  VF++ L+     A P+PGFR+ KGG
Sbjct: 971  DAHLQVRVDLPGKATQKVFDEALTSLARDAPPVPGFRKSKGG 1096



 Score = 40.9 bits (83), Expect(2) = 3e-09
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2 / +3

                                                 
Query: 563  KENLDASKNLKVLQSYEELEAAFEPGKEFCFDAAVHL 673
            +ENL  +  +K  QS EELE++F PG  F F   + L
Sbjct: 1800 QENLKVNPEIKTTQSEEELESSFTPGSSFSFSVVLQL 1910



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>LOC_Os12g19960:12012.t01839:unspliced-genomic retrotransposon, putative, centromere-specific|
          Length = 880

 Score = 35.9 bits (72), Expect = 0.43
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -2 / -1

                                                     
Query: 182 SSGTPKKVRHAKTEVDVQGPWCICDSPS*DSRGSFLRQSLPW 57
           S G+P  +R A   V +  PWCI  S S DS  S LR    W
Sbjct: 172 SQGSPALLRGAAPTVQLPLPWCILPSGSIDSLVSALR*GYKW 47



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>LOC_Os11g34050:12011.t02958:unspliced-genomic retrotransposon, putative, centromere-specific|
          Length = 3258

 Score = 35.4 bits (71), Expect = 0.60
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1 / +1

                                              
Query: 34   DSNGVIHFHGRLCRRNEPRESQDGESQMHQGPWT 135
            DS+G + FHGRLC   + +  ++   + H+ P+T
Sbjct: 2146 DSSGAVRFHGRLCVPQKAKVKEEILREAHRTPYT 2247



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>LOC_Os04g05430:12004.t00424:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed|
          Length = 11727

 Score = 35.4 bits (71), Expect = 0.60
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1 / +3

                                              
Query: 34   DSNGVIHFHGRLCRRNEPRESQDGESQMHQGPWT 135
            DS+G + FHGRLC   + +  ++   + H+ P+T
Sbjct: 6906 DSSGAVRFHGRLCVPQKAKVKEEILREAHRTPYT 7007



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>LOC_Os02g12320:12002.t01030:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed|
          Length = 8540

 Score = 35.4 bits (71), Expect = 0.60
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1 / +1

                                              
Query: 34   DSNGVIHFHGRLCRRNEPRESQDGESQMHQGPWT 135
            DS+G + FHGRLC   + +  ++   + H+ P+T
Sbjct: 5758 DSSGAVRFHGRLCVPQKAKVKEEILREAHRTPYT 5859



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>LOC_Os03g17410:12003.t01516:unspliced-genomic expressed protein|
          Length = 4976

 Score = 35.0 bits (70), Expect = 0.82
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3 / +1

                             
Query: 460  WSFPSFQSPKSWKWLCC 410
            W FPSF S +S KW CC
Sbjct: 3145 WCFPSFMSEQSSKWQCC 3195



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>LOC_Os10g21350:12010.t01624:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4570

 Score = 35.0 bits (70), Expect = 0.82
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1 / +2

                                              
Query: 34   DSNGVIHFHGRLCRRNEPRESQDGESQMHQGPWT 135
            D NG I F  RLC  N+P   Q    + H  P+T
Sbjct: 3188 DHNGAIRFKDRLCVPNDPELKQKILEEAHSSPYT 3289



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>LOC_Os11g22880:12011.t01958:unspliced-genomic retrotransposon, putative, centromere-specific|
          Length = 880

 Score = 34.5 bits (69), Expect = 1.1
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -2 / -1

                                                       
Query: 182 SSGTPKKVRHAKTEVDVQGPWCICDSPS*DSRGSFLRQSLPWKW 51
           S G+P   + A   V    PWC     S DS  S LRQ   W W
Sbjct: 172 SQGSPTLSQGAAPTVHSPLPWCSVPPGSIDSPMSALRQGCMWSW 41



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>LOC_Os03g07430:12003.t00606:unspliced-genomic serine/threonine-protein kinase NAK, putative, expressed|
          Length = 4118

 Score = 29.9 bits (59), Expect(2) = 1.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3 / -3

                                      
Query: 487  VQSDFFWYIWSFPSFQSPKSWKWLCC 410
            VQ    +Y+     F SP SW+W CC
Sbjct: 3672 VQIKDLFYVALLVHFGSPISWQWGCC 3595



 Score = 26.7 bits (52), Expect(2) = 1.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2 / -1

                        
Query: 137 DVQGPWCICDSPS 99
           D   PWC C+SPS
Sbjct: 851 DPPAPWCPCNSPS 813



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>LOC_Os09g04410:12009.t00337:unspliced-genomic retrotransposon, putative, centromere-specific|
          Length = 2546

 Score = 34.1 bits (68), Expect = 1.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1 / +3

                                              
Query: 34   DSNGVIHFHGRLCRRNEPRESQDGESQMHQGPWT 135
            DS G + FHGRLC + +    ++   + H+ P+T
Sbjct: 1227 DSLGAVRFHGRLCVQQKAEVKEEILREAHRTPYT 1328



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>LOC_Os01g54990:12001.t04912:unspliced-genomic auxin response factor 4, putative, expressed|
          Length = 6039

 Score = 33.6 bits (67), Expect = 2.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3 / +3

                                        
Query: 508  HF*WSNQVQSDFFWYIWSFPSFQSPKSW 425
            HF WSN +Q  F W  W+   F     W
Sbjct: 2640 HFVWSNSIQCHFLWGSWTIYPFTYCNHW 2723



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>LOC_Os07g42810:12007.t03930:unspliced-genomic AP-4 complex subunit mu-1, putative, expressed|
          Length = 5016

 Score = 33.6 bits (67), Expect = 2.1
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -1 / +3

                                                         
Query: 441  SRRNPGSGCAAAICFDKTFSKTESVILLLIVTRISITPSSSVSTD 307
            ++R PG+    ++   +   K    I + I+ RIS+T SSSVS D
Sbjct: 1824 TKRMPGTAVTKSVVATEPGGKKREEIFVDIIERISVTFSSSVSAD 1958



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>LOC_Os01g58444:12001.t006874:unspliced-genomic expressed protein|
          Length = 3811

 Score = 33.1 bits (66), Expect = 2.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3 / +2

                                        
Query: 184 YHQAHRRRYVMQKLKLTSKAPGAFVIHHL 98
           Y  A +RR+V+ +L     +PGA V+HHL
Sbjct: 398 YLPATQRRFVVVELAAPQLSPGAIVLHHL 484



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>LOC_Os06g13180:12006.t01193:unspliced-genomic metalloendoproteinase 1 precursor, putative, expressed|
          Length = 1476

 Score = 33.1 bits (66), Expect = 2.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1 / +2

                                      
Query: 406 CRSTTTSRISATERRENSKCTKRSRSA 486
           C  + TS  SAT RR    C++RSR A
Sbjct: 872 CTRSATSSASATRRRRTPSCSRRSRRA 952



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>LOC_Os04g47560:12004.t04281:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 6388

 Score = 32.7 bits (65), Expect = 4.0
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +2 / -1

                                                          
Query: 134  RQLQFLHDVPSSVCLMILHNKCSKRISHKVCRALQELSPVQCTENP 271
            ++++  HD P S+ +M+ H +   +  H + R L+ +   QC  +P
Sbjct: 4291 QEIKIPHDAPCSLDMMLTHGRQFIKELHLLLRCLRPIDISQCPHSP 4154



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>LOC_Os08g21330:12008.t01929:unspliced-genomic formamidopyrimidine-DNA glycosylase, putative, expressed|
          Length = 8599

 Score = 32.2 bits (64), Expect = 5.5
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -3 / +2

                                                          
Query: 328  IFFSKHRHMKIFKGYWRLRGIFCTLYWR*FLKRSANFMADSF*TFV 191
            +F  KHRH+  F    R +G       R*FL+R+A     + *  V
Sbjct: 6080 LFIKKHRHVSSFACLMRRQGFIQCKQHR*FLRRNARHSISAL*RLV 6217



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>LOC_Os04g04530:12004.t00339:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 3295

 Score = 32.2 bits (64), Expect = 5.5
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3 / -2

                                                      
Query: 331  SIFFSKHRHMKIFKGYWRLRGIFCTLYWR*FLKRSANFMADS 206
            SI  S H H  IFKGY +  G  C+   R*    +A + A S
Sbjct: 2364 SIPISSHFHSGIFKGYSKSAGF*CSALTR*QTSHTATYSAIS 2239



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>LOC_Os02g38710:12002.t03509:unspliced-genomic protein phosphatase 2C containing protein, expressed|
          Length = 6322

 Score = 32.2 bits (64), Expect = 5.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3 / +3

                                            
Query: 6   TWKRKLSWTG*QWSYPFPWEALPQERAS*ISRW 104
           +W R+L+  G  W  P P+ +LP E     S W
Sbjct: 588 SWMRRLTSNGTSWWSPTPFASLPSEHVDVDSSW 686



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>LOC_Os11g45908:12011.t04116:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3891

 Score = 32.2 bits (64), Expect = 5.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1 / +3

                                        
Query: 58   HGRLCRRNEPRESQDGESQMHQGPWTST 141
            HG  CRRN+  E + G+    +GPW+S+
Sbjct: 2991 HG**CRRNQVSEGEIGKGI*GEGPWSSS 3074



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>LOC_Os01g03180:12001.t00210:unspliced-genomic pr5, putative, expressed|
          Length = 1568

 Score = 32.2 bits (64), Expect = 5.5
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1 / +3

                                             
Query: 391 LIKAYCRSTTTSRISATERRENSKCTKRSRSALD 492
           LI  +C +TTT+  S+ E  E ++  KRS SA +
Sbjct: 138 LITTFCSTTTTTTTSSPETAEMAEQNKRSSSAAE 239



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>LOC_Os05g13390:12005.t01117:unspliced-genomic expressed protein|
          Length = 5980

 Score = 29.0 bits (57), Expect(2) = 5.6
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +1 / +1

                                                             
Query: 403  YCRSTTTSRISATERRENSKCTKRSRSALDWTIKSEESSHQENHQWRSR 549
            Y + + TSR+   +R E+ +   RS +   W+I+++  S    H +  R
Sbjct: 3232 YHKLSITSRVFFAKRPESMRPLARSWNLAAWSIEADVDSTGNGHAYAKR 3378



 Score = 25.8 bits (50), Expect(2) = 5.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2 / +2

                                           
Query: 35   IAMELSISMGGSAAGTSLVNLKMVNHKCTRG 127
            + MELS+ +G        +NL   + +C+ G
Sbjct: 2939 VVMELSVVLGAVVTLLGPINLSSTSERCSAG 3031



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>LOC_Os11g18194:12011.t01589:unspliced-genomic cycloartenol synthase, putative, expressed|
          Length = 31548

 Score = 31.8 bits (63), Expect = 7.5
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2 / +1

                                                      
Query: 14    AEALLDWIAMELSISMGGSAAGTSLVNLKMVNHKCTRGLGR 136
             A+ LL  +++  ++S+ G+ A T +     V H  T+GLGR
Sbjct: 19402 AQCLLSSLSLVFNLSVNGNQAKTLIFITHFVFHNQTKGLGR 19524



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>LOC_Os07g30310:12007.t02720:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 10368

 Score = 31.8 bits (63), Expect = 7.5
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3 / -1

                                                      
Query: 331  SIFFSKHRHMKIFKGYWRLRGIFCTLYWR*FLKRSANFMADS 206
            SI  S H H  IFKGY +  G  C+   R*    +A + A S
Sbjct: 8013 SIPISSHFHSGIFKGYSKPAGF*CSALTR*QTSHTATYSAIS 7888



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>LOC_Os07g28740:12007.t02564:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2057

 Score = 31.8 bits (63), Expect = 7.5
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3 / -2

                                                     
Query: 331 SIFFSKHRHMKIFKGYWRLRGIFCTLYWR*FLKRSANFMADS 206
           SI  S H H  IFKGY +  G  C+   R*    +A + A S
Sbjct: 988 SIPISSHFHSGIFKGYSKPAGF*CSALTR*QTSHTATYSAIS 863



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>LOC_Os01g60860:12001.t05467:unspliced-genomic spotted leaf protein 11, putative, expressed|
          Length = 2493

 Score = 31.8 bits (63), Expect = 7.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1 / -1

                                         
Query: 519  AAFFTFDGPIKCRATSFGTFGVFPPFSRR 433
            A+FF   GP++ R T+F T   F P  RR
Sbjct: 1734 ASFFVLVGPVRTRCTNFSTTDWFLPSLRR 1648



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>LOC_Os10g40324:12010.t03275:unspliced-genomic conserved hypothetical protein|
          Length = 11389

 Score = 24.4 bits (47), Expect(2) = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3 / +3

                         
Query: 559  NIFSDCAIDDFLD 521
            N+  DCA DDFL+
Sbjct: 6348 NLLKDCAGDDFLE 6386



 Score = 24.0 bits (46), Expect(2) = 8.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2 / +1

                        
Query: 698  LFHCVSFLLDGQ 663
            +FHCVSFL++ Q
Sbjct: 6286 VFHCVSFLMNIQ 6321


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 352,099,134
Number of extensions: 5326321
Number of successful extensions: 19379
Number of sequences better than 10.0: 27
Length of query: 311
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 262
Effective length of database: 52,856,264
Effective search space: 13848341168
Effective search space used: 13848341168
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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