ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5c11 |
|---|---|
| Clone Library Name | barley_pub |
>Q5N1P5:TIG_SYNP6 Trigger factor - Synechococcus sp. (strain ATCC 27144 / PCC 6301 /| SAUG 1402/1) (Anacystis nidulans) Length = 474 Score = 47.0 bits (110), Expect = 1e-04 Identities = 28/111 (25%), Positives = 55/111 (49%) Frame = +2 Query: 335 IEIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSXXXX 514 + +++ +S + + V+E+ L++ ++ PGFR K VP+ V + +G + Sbjct: 15 VGLQIEVSGEQSRQVYERTLTR-LSREVRFPGFRPGK------VPRPVLIQRLGETALKA 67 Query: 515 XXXXXXXXXXXXEYVEKENLDASKNLKVLQSYEELEAAFEPGKEFCFDAAV 667 + +E++ A N ++ +E L AAF+PGK F F+A+V Sbjct: 68 NAIEDLVQQSLESAIAQESIPAIGNYQLSSDFETLVAAFQPGKSFSFEASV 118
>Q935Z3:TIG_SYNP7 Trigger factor - Synechococcus sp. (strain PCC 7942) (Anacystis| nidulans R2) Length = 474 Score = 45.4 bits (106), Expect = 3e-04 Identities = 27/111 (24%), Positives = 55/111 (49%) Frame = +2 Query: 335 IEIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSXXXX 514 + +++ +S + + V+E+ L++ ++ PGFR K VP+ V + +G + Sbjct: 15 VGLQIEVSGEQSRQVYERTLTR-LSREVRFPGFRPGK------VPRPVLIQRLGETALKA 67 Query: 515 XXXXXXXXXXXXEYVEKENLDASKNLKVLQSYEELEAAFEPGKEFCFDAAV 667 + +E++ A N ++ +E L AAF+PG+ F F+A+V Sbjct: 68 NAIEDLVQQSLESAIAQESIPAIGNYQLSSDFETLVAAFQPGESFSFEASV 118
>Q3M725:TIG_ANAVT Trigger factor - Anabaena variabilis (strain ATCC 29413 / PCC 7937)| Length = 471 Score = 45.1 bits (105), Expect = 4e-04 Identities = 27/111 (24%), Positives = 58/111 (52%) Frame = +2 Query: 335 IEIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSXXXX 514 I + + I+ ++T +E+V+ K+++ +PGFR+ K VP++V L +G + Sbjct: 13 IGLEIEITPEITQKTYEQVI-KNLSRTVNIPGFRKGK------VPRQVLLQRLGKTHIKA 65 Query: 515 XXXXXXXXXXXXEYVEKENLDASKNLKVLQSYEELEAAFEPGKEFCFDAAV 667 + +++E++ A ++ S+++L ++EPG+ F AAV Sbjct: 66 AALEELLQDGIEQAIKQESIAAIGQPRLRSSFDDLINSYEPGQPLTFTAAV 116
>Q8YQX9:TIG_ANASP Trigger factor - Anabaena sp. (strain PCC 7120)| Length = 471 Score = 45.1 bits (105), Expect = 4e-04 Identities = 27/111 (24%), Positives = 58/111 (52%) Frame = +2 Query: 335 IEIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSXXXX 514 I + + I+ ++T +E+V+ K+++ +PGFR+ K VP++V L +G + Sbjct: 13 IGLEIEITPEITQKTYEQVI-KNLSRTVNIPGFRKGK------VPRQVLLQRLGKTHIKA 65 Query: 515 XXXXXXXXXXXXEYVEKENLDASKNLKVLQSYEELEAAFEPGKEFCFDAAV 667 + +++E++ A ++ S+++L ++EPG+ F AAV Sbjct: 66 AALEELLQDGIEQAIKQESIAAIGQPRLRSSFDDLINSYEPGQPLTFTAAV 116
>Q7NDP0:TIG_GLOVI Trigger factor - Gloeobacter violaceus| Length = 461 Score = 43.1 bits (100), Expect = 0.002 Identities = 27/109 (24%), Positives = 51/109 (46%) Frame = +2 Query: 341 IRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSXXXXXX 520 + V + + + +EK++ + A+ +PGFR K P+++ L G Sbjct: 15 LNVEVEGEKSKQAYEKLVRDTMRTAR-IPGFRPGKA------PRQLVLQFYGKERLRAQA 67 Query: 521 XXXXXXXXXXEYVEKENLDASKNLKVLQSYEELEAAFEPGKEFCFDAAV 667 E +E+E++ + NL++ S+EEL ++PG+ F AAV Sbjct: 68 LENLIDSSLKEAIEQESIASLGNLQLRDSFEELLGRYQPGEPLSFKAAV 116
>Q8DLI3:TIG_SYNEL Trigger factor - Synechococcus elongatus (Thermosynechococcus| elongatus) Length = 473 Score = 34.3 bits (77), Expect = 0.74 Identities = 25/103 (24%), Positives = 43/103 (41%) Frame = +2 Query: 347 VTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSXXXXXXXX 526 + +S + V+ +V++ + Q +PGFR+ K P+++ L +G Sbjct: 15 IEVSGTHSQQVYNQVVNDLLRHTQ-VPGFRKGKA------PRQLVLQQLGRERLRYLAME 67 Query: 527 XXXXXXXXEYVEKENLDASKNLKVLQSYEELEAAFEPGKEFCF 655 VEK N+ NL++ EL F PG+ F F Sbjct: 68 KLIEDAVKTAVEKNNIPYLGNLELAGGITELLDQFHPGENFSF 110
>Q3ANI7:TIG_SYNSC Trigger factor - Synechococcus sp. (strain CC9605)| Length = 469 Score = 33.9 bits (76), Expect = 0.96 Identities = 23/107 (21%), Positives = 48/107 (44%) Frame = +2 Query: 335 IEIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSXXXX 514 + + VT+ + + +E ++ ++ + LPGFR+ K VP+ V + +G Sbjct: 18 LAVTVTVPGERCKTSYEDAITS-LSRSINLPGFRKGK------VPRTVLVQQLGGVRIKA 70 Query: 515 XXXXXXXXXXXXEYVEKENLDASKNLKVLQSYEELEAAFEPGKEFCF 655 + +++E+L+ + ++ L +FEPGKE F Sbjct: 71 TALEKLIDNAWRDAIQQESLEPISQPDLSSGFDGLLESFEPGKELTF 117
>P27541:HSP70_BRUMA Heat shock 70 kDa protein - Brugia malayi (Filarial nematode worm)| Length = 644 Score = 32.0 bits (71), Expect = 3.7 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 19/106 (17%) Frame = +2 Query: 152 HDVPSSVCLMILHNKCSKRISHKVCRALQELSPVQCTENPTQAPIAFK------------ 295 H V +V + + S+R + K A+ L+ ++ PT A IA+ Sbjct: 137 HAVKDAVITVPAYFNDSQRQATKDSGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERNVL 196 Query: 296 -------DFHVSVLTEEDGVIEIRVTISSKMTDSVFEKVLSKHIAA 412 F VS+LT EDG+ E++ T F+ + H A Sbjct: 197 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGEDFDNRMVNHFVA 242
>P31117:T2C2_PBCV1 Type II restriction enzyme CviAII - Paramecium bursaria Chlorella| virus 1 (PBCV-1) Length = 342 Score = 27.7 bits (60), Expect(2) = 5.5 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 436 ATERRENSKCTKRSRSALDWTIKSEESSHQENHQ 537 A E RE + TK+ + I+SE +++NHQ Sbjct: 54 AKEERETQQLTKKISKGIFDKIRSENKKYEKNHQ 87 Score = 22.3 bits (46), Expect(2) = 5.5 Identities = 10/48 (20%), Positives = 20/48 (41%) Frame = +2 Query: 266 NPTQAPIAFKDFHVSVLTEEDGVIEIRVTISSKMTDSVFEKVLSKHIA 409 NP D + + ++ +SSK+T +F+K+ +A Sbjct: 7 NPVTGRFVKVDGSTGKKIKTGNIYDVNNILSSKLTKKIFDKIRRNDLA 54
>Q07395:YDL63_YEAST Uncharacterized protein YDL063C - Saccharomyces cerevisiae (Baker's| yeast) Length = 620 Score = 31.2 bits (69), Expect = 6.2 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 13/89 (14%) Frame = +2 Query: 176 LMILHNKCSKRISHKVCRALQELSPVQCT---ENPTQ-APIAFKDFHVSVLTE------- 322 + I +++C+K I H VC ++ + PVQ NP + P KD V+T+ Sbjct: 276 MKITYDQCNKMI-HSVCHSINNIDPVQLVNDINNPVEIGPATSKDESSKVITKIKDYNAK 334 Query: 323 -EDGVIEIR-VTISSKMTDSVFEKVLSKH 403 + +I+++ + I+ + ++ E V SK+ Sbjct: 335 RNESMIKLQSIEIAIDLITAIIEIVASKY 363
>Q3V1F8:ABHD9_MOUSE Abhydrolase domain-containing protein 9 precursor - Mus musculus| (Mouse) Length = 367 Score = 31.2 bits (69), Expect = 6.2 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = +2 Query: 80 TSLVNLKMVNHKCTRGLGRQLQFLHDVPSSV---CLMILHNKCSKRISHKVCRALQELSP 250 T+L+ ++ K R L L +L + ++ C+ + H C R + C Q LSP Sbjct: 7 TALLAPSRLSLKLLRALVMSLVYLAALVAAFVYSCIALTHVMCRPR---RGCCGRQRLSP 63 Query: 251 VQCTENPTQAPIAFKDFHVSV 313 +C +PT F VSV Sbjct: 64 PECLRDPTLGEHCFLTLRVSV 84
>Q9MBF8:DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex -| Chlamydomonas reinhardtii Length = 4513 Score = 30.8 bits (68), Expect = 8.1 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +2 Query: 194 KCSKRISHKVCRALQELSPVQCTENPTQA-PIAFKDFHVSVLTEEDGVIEIRVTISS 361 K + H + ++LQELS + +N T+ PI FHV+++ E +E+R TI + Sbjct: 871 KLEDALRHVIKKSLQELSRLLNGDNKTEVMPI----FHVTMVLERTNRVELRPTIQA 923
>Q9TM41:ATPB_CYACA ATP synthase subunit beta - Cyanidium caldarium| Length = 490 Score = 30.8 bits (68), Expect = 8.1 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Frame = +2 Query: 314 LTEEDGVIEIRVTISSKMTDS------VFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKE 475 L+EED +I R K VF + K+++ + + GF + G+ N+P E Sbjct: 410 LSEEDRLIVSRARKIEKFLSQPFFVAEVFTGISGKYVSLSDSIKGFNMILSGEVDNIP-E 468 Query: 476 VALHLIG 496 A +L+G Sbjct: 469 QAFYLVG 475 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 149,147,695 Number of extensions: 3014484 Number of successful extensions: 7931 Number of sequences better than 10.0: 13 Number of HSP's gapped: 7924 Number of HSP's successfully gapped: 14 Length of query: 311 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 198 Effective length of database: 69,691,104 Effective search space: 13798838592 Effective search space used: 13798838592 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
