>Q9CSU0:CT077_MOUSE Uncharacterized protein C20orf77 homolog - Mus musculus (Mouse)|
          Length = 326
 Score =  117 bits (293), Expect = 2e-25
 Identities = 90/308 (29%), Positives = 142/308 (46%), Gaps = 23/308 (7%)
 Frame = +1

Query: 208  FSEKGLAEKLTKLNSSAASIQTLSHWCVFHRKRARRIVDTWEKQFNNATKDKKVSFLYLS 387
            FSE  L +KL++L++S  S+QTLS W + HRK A  IV  W ++   A  ++K++FLYL+
Sbjct: 4    FSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLA 63

Query: 388  NDILQNSKRKGGEFVNEFWKVLPGSLKDVHDSGGEHGKKVVARLIGIWDERKVFGTR-IE 564
            ND++QNSKRKG EF  EF  VL  +   V     E  KK + RL+ IW ER V+G   I+
Sbjct: 64   NDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQ 123

Query: 565  SLKVDIL-GENPPTLXXXXXXXXXXXXXXXXXKAVRKDSSTYIKELTVCG--MPEKIVTA 735
             LK+ +   ++PP                   +       +Y  +    G  + E+++ A
Sbjct: 124  QLKLSMEDSKSPPPKAAEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIKA 183

Query: 736  YQSVVDQYFD---------------EDAALNKCKTTVNVLEKMDKDVDNACTHGIPQASS 870
             Q + +                   +D +L +  T     E++ K VD AC         
Sbjct: 184  LQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGR 243

Query: 871  LVSDLQEQEAVLKNCIEQLESVDTARTNLINQLKVALSEQEAKSELLRTQL----QVARA 1038
            L ++L+++  + +  +E  +          NQ K  LSE+E K E  + +L    QV + 
Sbjct: 244  LAAELEDRRQLARMLVEYTQ----------NQ-KEVLSEKEKKLEEYKQKLARVTQVRKE 292

Query: 1039 EAEHAMQL 1062
               H   L
Sbjct: 293  LKSHIQSL 300

>Q9NQG5:CT077_HUMAN Uncharacterized protein C20orf77 - Homo sapiens (Human)|
          Length = 326

 Score =  117 bits (292), Expect = 3e-25
 Identities = 90/308 (29%), Positives = 142/308 (46%), Gaps = 23/308 (7%)
 Frame = +1

Query: 208  FSEKGLAEKLTKLNSSAASIQTLSHWCVFHRKRARRIVDTWEKQFNNATKDKKVSFLYLS 387
            FSE  L +KL++L++S  S+QTLS W + HRK A  IV  W ++   A  ++K++FLYL+
Sbjct: 4    FSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLA 63

Query: 388  NDILQNSKRKGGEFVNEFWKVLPGSLKDVHDSGGEHGKKVVARLIGIWDERKVFGTR-IE 564
            ND++QNSKRKG EF  EF  VL  +   V     E  KK + RL+ IW ER V+G   I+
Sbjct: 64   NDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQ 123

Query: 565  SLKVDIL-GENPPTLXXXXXXXXXXXXXXXXXKAVRKDSSTYIKELTVCG--MPEKIVTA 735
             LK+ +   ++PP                   +       +Y  +    G  + E+++ A
Sbjct: 124  QLKLSMEDSKSPPPKATEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIKA 183

Query: 736  YQSVVDQYFD---------------EDAALNKCKTTVNVLEKMDKDVDNACTHGIPQASS 870
             Q + +                   +D +L +  T     E++ K VD AC         
Sbjct: 184  LQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGR 243

Query: 871  LVSDLQEQEAVLKNCIEQLESVDTARTNLINQLKVALSEQEAKSELLRTQL----QVARA 1038
            L ++L+++  + +  +E  +          NQ K  LSE+E K E  + +L    QV + 
Sbjct: 244  LAAELEDRRQLARMLVEYTQ----------NQ-KDVLSEKEKKLEEYKQKLARVTQVRKE 292

Query: 1039 EAEHAMQL 1062
               H   L
Sbjct: 293  LKSHIQSL 300

>O74814:YJ03_SCHPO UPF0400 protein C337.03 - Schizosaccharomyces pombe (Fission yeast)|
          Length = 387

 Score = 70.1 bits (170), Expect = 4e-11
 Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 2/250 (0%)
 Frame = +1

Query: 223 LAEKLTKLNSSAASIQTLSHWCVFHRKRARRIVDTWEKQFNNATKDKKVSFLYLSNDILQ 402
           ++ KL  LN +  SI  ++HW +FH++ A  IV  W +    ++ +KK+  LYL N+++Q
Sbjct: 8   VSSKLATLNETQESITGIAHWVMFHKRYADEIVQIWLEALYESSSNKKLLLLYLLNEVVQ 67

Query: 403 NSK-RKGGEFVNEFWKVLPGSLKDVHDSGGEHGKKVVARLIGIWDERKVFGTRIESLKVD 579
            S+ +K  E+++     +  S+ D + S     K  +  +  +W +R +F   I    + 
Sbjct: 68  QSRVKKISEYIDAVSPYVVNSVADAYASVPASIKTKIKYVFDVWCQRGIFSKEI----LL 123

Query: 580 ILGENPPTLXXXXXXXXXXXXXXXXXKAVRKDSSTYIKELTVCGMPEKIVTAYQSVVDQY 759
            L E                         R  + T +   +       +   Y+S +++ 
Sbjct: 124 SLQERFNNAENSGHSNYYPVGPPEWAPYTRLMTQTSLYAKSAHSTKTVVDALYKSYLEKQ 183

Query: 760 FDEDAALNKCKTTVNVLEKMDKDVDNACTHG-IPQASSLVSDLQEQEAVLKNCIEQLESV 936
            D    L+  K  +N   +  K    AC        +SL S ++EQ+ +L    E L+SV
Sbjct: 184 SDYSELLDNYKKQLNKASESCKGNYQACIESRSTLITSLESLIEEQKKLLSEEEESLKSV 243

Query: 937 DTARTNLINQ 966
           ++  +NL N+
Sbjct: 244 ESIISNLENK 253

>P34281:YKK4_CAEEL Uncharacterized protein C02F5.4 - Caenorhabditis elegans|
          Length = 315

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 57/270 (21%), Positives = 116/270 (42%), Gaps = 8/270 (2%)
 Frame = +1

Query: 208 FSEKGLAEKLTKLNSSAASIQTLSHWCVFHRKRARRIVDTWEKQFNNATKDKK-VSFLYL 384
           F+E+ L +KLT L++  +SIQT S W + +      I+  W K     T   K V+ LY+
Sbjct: 4   FTEQTLRQKLTNLSNHPSSIQTTSAWLLQNHSNRELIIRVWLKTVKKETHGSKIVNLLYV 63

Query: 385 SNDILQNSKRKGGEFVNEFWKVLPGSLKD-VHDSGGEHGKKVVARLIGIWDERKVFG--- 552
           +ND+ QN+++   +F +EF+  +  S +  +     +  +  + +LI +W +R++F    
Sbjct: 64  ANDVSQNARKTCPQFKDEFFPAIESSFRHAIELKNAKEVEHAIGKLINVWKDRQIFTPSQ 123

Query: 553 -TRIESL--KVDILGENPPTLXXXXXXXXXXXXXXXXXKAVRKDSSTYIKELTVCGMPEK 723
             R+  +  +V + G  P                    +  +K++   +  L     P  
Sbjct: 124 CKRLHEVHQQVKLSGSFPTPAVANKEHGKVAQPSQFVVEEAKKNAQDVLLSLKRLQNPPS 183

Query: 724 IVTAYQSVVDQYFDEDAALNKCKTTVNVLEKMDKDVDNACTHGIPQASSLVSDLQEQEAV 903
                ++ + +Y D  +   K ++  +  E     V N     +P        L+E    
Sbjct: 184 TEREIRTELSKYPDNISCPEKLQSVRSSQEAQSLLVQN--EEALPM-------LEEYVKR 234

Query: 904 LKNCIEQLESVDTARTNLINQLKVALSEQE 993
           LKN   + E++++    LI  +++++   E
Sbjct: 235 LKNETNERETLESNLNMLIENVRMSIEHHE 264

>Q6NXI6:K0460_MOUSE Uncharacterized protein KIAA0460 - Mus musculus (Mouse)|
          Length = 1469

 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
 Frame = +1

Query: 157 GTKADAKADTXXXXXXXFSEKGLAEKLTKLNSSAASIQTLSHWCVFHRKRARRIVDTWEK 336
           G    +KA +         E  L  K   + ++  SIQ LS WC+ ++K    IV  W K
Sbjct: 5   GGGGSSKASSSSASSAGALESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMK 64

Query: 337 QFNNATKDKKVSFLYLSNDILQNSKRKGGEFVNE-FWKVLPGSLKDVHDSGGEHGKKVVA 513
               +T   +++  YL+ND++QN KRK      E F  VLP +   V D       K + 
Sbjct: 65  WLRRSTYPHRLNLFYLANDVIQNCKRKNAIIFRESFADVLPEAAALVKDPS---VSKSIE 121

Query: 514 RLIGIWDERKVF 549
           R+  IW++R V+
Sbjct: 122 RIFKIWEDRNVY 133

>Q5VT52:K0460_HUMAN Uncharacterized protein KIAA0460 - Homo sapiens (Human)|
          Length = 1461

 Score = 65.5 bits (158), Expect = 9e-10
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
 Frame = +1

Query: 157 GTKADAKADTXXXXXXXFSEKGLAEKLTKLNSSAASIQTLSHWCVFHRKRARRIVDTWEK 336
           G    +KA +         E  L  K   + ++  SIQ LS WC+ ++K    IV  W K
Sbjct: 5   GGGGSSKASSSSASSAGALESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMK 64

Query: 337 QFNNATKDKKVSFLYLSNDILQNSKRKGGEFVNE-FWKVLPGSLKDVHDSGGEHGKKVVA 513
               +    +++  YL+ND++QN KRK      E F  VLP +   V D       K V 
Sbjct: 65  WLRRSAYPHRLNLFYLANDVIQNCKRKNAIIFRESFADVLPEAAALVKDPS---VSKSVE 121

Query: 514 RLIGIWDERKVF 549
           R+  IW++R V+
Sbjct: 122 RIFKIWEDRNVY 133

>Q05543:RT103_YEAST Regulator of Ty1 transposition protein 103 - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 409

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 13/262 (4%)
 Frame = +1

Query: 208 FSEKGLAEKLTKLNSSAASIQTLSHWCVFHRKRARRIVDTWEKQF--NNATKDKKVSFLY 381
           FS +    KL  L  S  SI + S W +   + A ++ + W++     +    +K+  LY
Sbjct: 3   FSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRPSVNTRRKLLGLY 62

Query: 382 LSNDILQNSK-RKGGEFVNEFWKVLPGSLKDVHDSGGEHGKKVVARLIGIWDERKVFGTR 558
           L N ++Q +K +K  +F + F KV    L  ++       KK ++R++ I  ER +F  +
Sbjct: 63  LMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPRDLKKKLSRVVNILKERNIFSKQ 122

Query: 559 -IESLKVDILGENPPTLXXXXXXXXXXXXXXXXXKAVRKDSSTYIK-ELTVCGMPEKIVT 732
            +  ++  +  E+ P                   K   KD    +K    VC M  +   
Sbjct: 123 VVNDIERSLKTESSPV---------EALVLPQKLKDFAKDYEKLVKMHHNVCAMKMR--- 170

Query: 733 AYQSVVDQYFDEDAALNKCKTTVNVLEKMDKDVDNAC----THGIPQASSLVSD----LQ 888
            +    D+     +   +   T++ +  M KD+ N        GI +  S + D    L 
Sbjct: 171 -FDKSSDELDPSSSVYEENFKTISKIGNMAKDIINESILKRESGIHKLQSTLDDEKRHLD 229

Query: 889 EQEAVLKNCIEQLESVDTARTN 954
           E++ +L      L + D +R N
Sbjct: 230 EEQNMLSEIEFVLSAKDPSRLN 251

>Q6L8H4:KRA51_HUMAN Keratin-associated protein 5-1 - Homo sapiens (Human)|
          Length = 278

 Score = 39.7 bits (91), Expect = 0.056
 Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
 Frame = -3

Query: 1616 CISCGTIGCNGGGANEPGTWLTCASDCVLP*EVGAAPICCCTCGTW----AKKGGAPVS- 1452
            C SCG  GC GG  +  G+   C S C         P+CCC+C +       KGG   S 
Sbjct: 177  CGSCG--GCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSC 234

Query: 1451 -------PACCSS 1434
                   P CCSS
Sbjct: 235  SQCSCCKPCCCSS 247

>Q9UPN6:RBM16_HUMAN Putative RNA-binding protein 16 - Homo sapiens (Human)|
          Length = 1271

 Score = 36.6 bits (83), Expect = 0.47
 Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
 Frame = +1

Query: 310 RRIVDTWEKQFNNATKDKKVSFLYLSNDILQNSKRKGGE----FVNEFWKVLPGSLKDVH 477
           + +V + EK       + KV  LY+ + I++ S+ + G+    F   F   +  + ++++
Sbjct: 41  KHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLY 100

Query: 478 DSGGEHGKKVVARLIGIWDERKVFGTRIESLKVDILGENPP 600
              G+   K+V R++ +W +  VF + I    +D+    PP
Sbjct: 101 RCPGDDKSKIV-RVLNLWQKNNVFKSEIIQPLLDMAAGIPP 140

>O35550:RABE1_RAT Rab GTPase-binding effector protein 1 - Rattus norvegicus (Rat)|
          Length = 862

 Score = 36.2 bits (82), Expect = 0.62
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
 Frame = +1

Query: 802  NVLEKMDKDVDNACTHGIPQASSLVSDLQ-------EQEAVLKNCIEQLESVDTARTNLI 960
            N+ E +  +++N C   I   SSL ++L+       + E+ L+   +QLES+   + NL 
Sbjct: 722  NLEETLQLEIEN-CKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNLE 780

Query: 961  NQLK----------VALSEQEAKSELLRTQLQVARAEAEHAMQLRQRL 1074
             QLK            + E++ K++ L+T+L V+       ++L Q L
Sbjct: 781  EQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTL 828

>O35551:RABE1_MOUSE Rab GTPase-binding effector protein 1 - Mus musculus (Mouse)|
          Length = 862

 Score = 35.4 bits (80), Expect = 1.1
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
 Frame = +1

Query: 802  NVLEKMDKDVDNACTHGIPQASSLVSDLQ-------EQEAVLKNCIEQLESVDTARTNLI 960
            N+ E +  +++N C   I   SSL ++L+       + E+ L+   +QLES+   + NL 
Sbjct: 722  NLEETLQLEIEN-CKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKVNLE 780

Query: 961  NQLK----------VALSEQEAKSELLRTQLQVARAEAEHAMQLRQRL 1074
             QLK            + E++ K+  L+T+L V+       ++L Q L
Sbjct: 781  EQLKKETAAKATVEQLMFEEKNKARRLQTELDVSEQVQRDFVKLSQTL 828

>Q66GS9:CP135_HUMAN Centrosomal protein of 135 kDa - Homo sapiens (Human)|
          Length = 1140

 Score = 35.4 bits (80), Expect = 1.1
 Identities = 24/101 (23%), Positives = 50/101 (49%)
 Frame = +1

Query: 766  EDAALNKCKTTVNVLEKMDKDVDNACTHGIPQASSLVSDLQEQEAVLKNCIEQLESVDTA 945
            +D   +  K T+ V++K +KD        + + +  +++LQE  A  +  + Q++ + + 
Sbjct: 718  QDEEAHVMKKTIGVIDK-EKDF---LQETVDEKTEKIANLQENLANKEKAVAQMKIMISE 773

Query: 946  RTNLINQLKVALSEQEAKSELLRTQLQVARAEAEHAMQLRQ 1068
              + +NQLK  L  ++ +   LR QL  A  E +   + R+
Sbjct: 774  CESSVNQLKETLVNRDREINSLRRQLDAAHKELDEVGRSRE 814

>P24740:POL_HV1U4 Gag-Pol polyprotein - Human immunodeficiency virus type 1 (isolate|
            U455 group M subtype A) (HIV-1)
          Length = 1428

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
 Frame = +1

Query: 1138 SEQTAAAVQNSEARPI--SPQFQPVHQATSPPTMTS-AMVDEPKITAAAMADKLASLSSG 1308
            ++Q AA   +S+  PI  + Q QPVHQA SP T+ +   V E K  +  +    ++LS G
Sbjct: 115  TQQAAANTGSSQNYPIVQNAQGQPVHQALSPRTLNAWVKVVEDKAFSPEVIPMFSALSEG 174

Query: 1309 --QQVLSSIFSSLAAEQAA 1359
               Q L+ + + +   QAA
Sbjct: 175  ATPQDLNMMLNVVGGHQAA 193

>Q14980:NUMA1_HUMAN Nuclear mitotic apparatus protein 1 - Homo sapiens (Human)|
          Length = 2115

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
 Frame = +1

Query: 772  AALNKCKTTVNV-LEKMDKDVDNACTHGIPQASSLVSDLQEQEAVLKNCIEQLESVDTAR 948
            A+L    TT+N  +++ D+++         + + L   LQ+QE   +    Q+E + ++ 
Sbjct: 501  ASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSL 560

Query: 949  TNLINQLKVALSEQEAKSELLRTQLQVARAEAEHAMQLR 1065
                 QLK    +QEA  +    QL  A  E E +++ R
Sbjct: 561  KQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRER 599



 Score = 32.3 bits (72), Expect = 8.9
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = +1

Query: 886  QEQEAVLKNCIEQLESVDTARTNLINQLKVALSEQEAKSELLRTQLQVARAEAEHAMQLR 1065
            QE+   L   +EQLE     +T  + +L   L++ +  S++ + +L+  +A+   + Q  
Sbjct: 1527 QEERQKLTAQVEQLEVFQREQTKQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEA 1586

Query: 1066 QRL 1074
            QRL
Sbjct: 1587 QRL 1589

>P24736:GAG_HV1U4 Gag polyprotein - Human immunodeficiency virus type 1 (isolate U455|
            group M subtype A) (HIV-1)
          Length = 493

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
 Frame = +1

Query: 1138 SEQTAAAVQNSEARPI--SPQFQPVHQATSPPTMTS-AMVDEPKITAAAMADKLASLSSG 1308
            ++Q AA   +S+  PI  + Q QPVHQA SP T+ +   V E K  +  +    ++LS G
Sbjct: 115  TQQAAANTGSSQNYPIVQNAQGQPVHQALSPRTLNAWVKVVEDKAFSPEVIPMFSALSEG 174

Query: 1309 --QQVLSSIFSSLAAEQAA 1359
               Q L+ + + +   QAA
Sbjct: 175  ATPQDLNMMLNVVGGHQAA 193

>Q24702:DVA1_DICVI DVA-1 polyprotein precursor - Dictyocaulus viviparus (Bovine|
           lungworm)
          Length = 1557

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
 Frame = +1

Query: 217 KGLAEKLTKLNSSAASIQTLSHWCVFHRKRARRIVDTWEKQFNNATKDKKVSFLYLSNDI 396
           KGL+ K    N +    +   +W    +K++   + T  K FN   K+ +  F  L+ D 
Sbjct: 146 KGLSRKRRDSNKN---FEEFIYWMTDEQKQSMNDMKTAGKSFNEIHKEGRKYFKALTIDK 202

Query: 397 LQNSKRKGGEFVNEFWKVLPGS-----LKDVHDSGGEH-GKKVVARLIGIWDERKVFGTR 558
             + K +  +   +++  +  S     +K ++D    H  K  VARL G   E K F  +
Sbjct: 203 QSSLKEQFKDKCKKYFMQIANSDEVEKIKSLNDDEIRHVVKNAVARLNG---EDKEFAVK 259

Query: 559 IESLKVDIL 585
           +E+L  D+L
Sbjct: 260 METLCEDVL 268

>Q15276:RABE1_HUMAN Rab GTPase-binding effector protein 1 - Homo sapiens (Human)|
          Length = 862

 Score = 33.9 bits (76), Expect = 3.1
 Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
 Frame = +1

Query: 802  NVLEKMDKDVDNACTHGIPQASSLVSDLQ-------EQEAVLKNCIEQLESVDTARTNLI 960
            N+ E +  +++N C   I   SSL ++L+       + E+ L+   +QLES+   + +L 
Sbjct: 722  NLEETLQLEIEN-CKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKISLE 780

Query: 961  NQLK----------VALSEQEAKSELLRTQLQVARAEAEHAMQLRQRL 1074
             QLK            + E++ K++ L+T+L V+       ++L Q L
Sbjct: 781  EQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTL 828

>Q9D952:EVPL_MOUSE Envoplakin - Mus musculus (Mouse)|
          Length = 2035

 Score = 33.9 bits (76), Expect = 3.1
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
 Frame = +1

Query: 691  KELTVCGMPEKIVTAYQSVVDQYFDEDAA----LNKCKTTVNVLEKMDKDVDNACTHGIP 858
            KEL V  + E I     ++   Y +  AA    L + +    +L K + D D    H   
Sbjct: 842  KELRVISLQENIQAQENNLAKAYTEVAAAEQQQLRQLEFAKKMLRKKELDEDIQAIHSAR 901

Query: 859  QASSLVSDLQEQEA-VLKNCIEQLESVDTARTNLINQLKVALSEQEAKSELLRTQLQVAR 1035
            Q S   +  +  E+ VLK  +E+           + +++  L EQ  +   LRTQ  VAR
Sbjct: 902  QGSGSPAHARTAESEVLKTQLEE-------ERKRVAEVQRDLEEQRQRLLQLRTQQPVAR 954

Query: 1036 AEAEHAMQ 1059
             E +  ++
Sbjct: 955  LEEKEVVE 962

>P20585:MSH3_HUMAN DNA mismatch repair protein Msh3 - Homo sapiens (Human)|
          Length = 1137

 Score = 33.1 bits (74), Expect = 5.2
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 784 KCKTTVNVLEKMDKDVDNACTHGIPQASSLVSDLQEQEAVLKNCIE 921
           KC  T NV + ++K  +  C   +PQ+      LQE+ AVL  C +
Sbjct: 123 KCLRTRNVSKSLEKLKEFCCDSALPQSRVQTESLQERFAVLPKCTD 168

>Q8ZGC7:FTSK_YERPE DNA translocase ftsK - Yersinia pestis|
          Length = 1305

 Score = 33.1 bits (74), Expect = 5.2
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = -2

Query: 312 SGSLPVKNTP-M*KCLDARRGAVEFS*LLGKPLLAERAATAATGXXXXXXXXXXXHEDSA 136
           S  + V NTP M   LDA+   +  + L  KP+LA     AAT             + S+
Sbjct: 427 SSHISVGNTPYMNPGLDAQIDGLSTTSLTNKPVLASGTVAAATAAAAFMPAFTATSDSSS 486

Query: 135 *PRVRSGPSLTRRNPELRPPELEFAA 58
             +   GP L R NP   P   E A+
Sbjct: 487 QIKQGIGPELPRPNPVRIPTRRELAS 512

>P29555:ABDA_DROME Homeobox protein abdominal-A - Drosophila melanogaster (Fruit fly)|
          Length = 590

 Score = 32.7 bits (73), Expect = 6.8
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = +1

Query: 1180 PISPQFQPV----HQATSPPTMTSAMVDEPKITAAAMADKLASLSSGQQVLSSIFSSLAA 1347
            P  PQFQP     H  T+PP  +SA V      AAA A    S SS     SS  +++A 
Sbjct: 11   PKYPQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSS--NTIAG 68

Query: 1348 EQAASIN 1368
               ++ N
Sbjct: 69   SNTSNTN 75

>P60409:KR107_HUMAN Keratin-associated protein 10-7 - Homo sapiens (Human)|
          Length = 375

 Score = 32.3 bits (72), Expect = 8.9
 Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 2/106 (1%)
 Frame = -3

Query: 1616 CISCGTIGCNGGGANEPG--TWLTCASDCVLP*EVGAAPICCCTCGTWAKKGGAPVSPAC 1443
            CIS  T  C    + +P   T   C   C +P  V   P+CC    T +   G+   PAC
Sbjct: 205  CISSCTPSCCQQSSCQPACCTSSPCQQACCVP--VCCKPVCCVP--TCSDDSGSCCQPAC 260

Query: 1442 CSSLGLFGLSKXXXXXXXXXXXXXPFMEAACSAARDEKMEDSTCWP 1305
            C+S      S+                   CS A     + S+C P
Sbjct: 261  CTS------SQSQQGCCVPVCCKPVCCVPVCSGASSSCCQQSSCQP 300

>Q9UK53:ING1_HUMAN Inhibitor of growth protein 1 - Homo sapiens (Human)|
          Length = 422

 Score = 32.3 bits (72), Expect = 8.9
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3

Query: 18  CSPYPLPRFPSPRRRQIQAQEVVTRGFG 101
           CS   LPR   P RRQ QA  ++TRG+G
Sbjct: 155 CSSDRLPRPAGPARRQFQAASLLTRGWG 182

>Q02224:CENPE_HUMAN Centromeric protein E - Homo sapiens (Human)|
          Length = 2663

 Score = 32.3 bits (72), Expect = 8.9
 Identities = 26/130 (20%), Positives = 62/130 (47%)
 Frame = +1

Query: 670  KDSSTYIKELTVCGMPEKIVTAYQSVVDQYFDEDAALNKCKTTVNVLEKMDKDVDNACTH 849
            KDS+    E+ + G+ +++  ++        DE  ++ K K  +  L+++ +   +    
Sbjct: 1412 KDSALLRIEIEMLGLSKRLQESH--------DEMKSVAKEKDDLQRLQEVLQSESDQLKE 1463

Query: 850  GIPQASSLVSDLQEQEAVLKNCIEQLESVDTARTNLINQLKVALSEQEAKSELLRTQLQV 1029
             I +  +   + +E+  V   C+++ E         IN+L+V LSE+E +   ++ QL+ 
Sbjct: 1464 NIKEIVAKHLETEEELKVAHCCLKEQEET-------INELRVNLSEKETEISTIQKQLEA 1516

Query: 1030 ARAEAEHAMQ 1059
               + ++ +Q
Sbjct: 1517 INDKLQNKIQ 1526


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 370,552,163
Number of extensions: 7746052
Number of successful extensions: 20032
Number of sequences better than 10.0: 24
Number of HSP's gapped: 20013
Number of HSP's successfully gapped: 25
Length of query: 767
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 646
Effective length of database: 67,496,744
Effective search space: 43602896624
Effective search space used: 43602896624
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)