ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf2g03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001072583.1| Oryza sativa (japonica cultivar-group) Os12g0126800 (Os12g0126800) mRNA, complete cds Length = 2506 Score = 628 bits (317), Expect = e-176 Identities = 997/1221 (81%), Gaps = 12/1221 (0%) Strand = Plus / Plus Query: 144 cttcgtgatggcgggcacgaaggcggatgcgaaggcggatacca---gtggcggcggtgg 200 |||||||||||||| ||| |||||||| || |||||||| || | | |||||||| || Sbjct: 262 cttcgtgatggcggacaccaaggcggaggcaaaggcggaaactatcggcggcggcggcgg 321 Query: 201 cggctct------ttcagcgagaaggggcttgccgagaagctaactaaactcaacagctc 254 ||||||| ||||||||| ||| | ||| |||||||| | || ||||||| | | Sbjct: 322 cggctctggctcgttcagcgagcaggcgtttgttgagaagcttaacaagctcaacaacac 381 Query: 255 cgcggcgagcatccagacactttcacattggtgtgtttttcaccggaagagagccagaag 314 ||| | || ||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct: 382 ggcgactaggatccagacactttcaaattggtgcatttttcaccgaaagagagccagaaa 441 Query: 315 aatcgtcgacacatgggagaaacagtttaataatgcaacaaaggataagaaagtgtcatt 374 | || || ||||||||||| |||| ||| | ||||| |||||||||||||| ||||| Sbjct: 442 ggttgttgatacatgggagaagcagtataacagtgcaaataaggataagaaagtatcatt 501 Query: 375 cctgtatctatcaaatgacatcctgcaaaatagcaaacgcaagggtggagaatttgtgaa 434 |||||| || |||||||| |||||||||||||| ||||||||||| || || |||||||| Sbjct: 502 cctgtacctgtcaaatgatatcctgcaaaatagtaaacgcaagggaggggagtttgtgaa 561 Query: 435 tgagttctggaaggttcttcctggatcacttaaagatgttcatgatagcgggggagaaca 494 ||| || |||| |||||||||||||| | | ||||| || ||| | ||||||||| | Sbjct: 562 tgaattttggagggttcttcctggattattgaaagacttttatgtcaatgggggagaaga 621 Query: 495 tggaaagaaagtggtcgcaagattaatagggatttgggatgagcggaaggtttttggaac 554 |||||||||||| || | ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 622 tggaaagaaagtagttggaagattaatagatatttgggatgagcggaaggtctttggaac 681 Query: 555 ccgtattgagagcctaaaagttgacatccttggtgagaaccctcctacattggataacaa 614 ||||||||| || || ||| |||||| ||||||| | | ||| |||| ||| |||||| Sbjct: 682 ccgtattgaaagtctgaaaaatgacattcttggtggtagcactcatacaatgggtaacaa 741 Query: 615 tgataatggttcaaatcctagccctaatccctcttcaaatcccaaagctgttcggaagga 674 || ||| | |||||||| |||||||| ||||||||| | ||||||||| ||||| || Sbjct: 742 tgtcaatagctcaaatccaagccctaacccctcttcagtttccaaagctgcgcggaaaga 801 Query: 675 ttccagtacatatataaaagaactgactgtttgcgggatgcctgaaaagattgtgactgc 734 ||| ||||| | || | |||| |||||| |||||||||| ||||||||||| || || Sbjct: 802 ttctggtacagtaacaagaaaacttactgttggcgggatgccagaaaagattgtaacagc 861 Query: 735 atatcagtctgtagttgatcagtattttgacgaggacgcagctttaaacaaatgtaagac 794 ||||||||| || ||||||| ||||||| || ||| |||||||||||||||| || | Sbjct: 862 atatcagtcagtgcttgatcaacattttgatgaagacacagctttaaacaaatgcaataa 921 Query: 795 tactgttaatgtgttggagaagatggacaaagatgtagataatgcttgtacccatggtat 854 | |||||| ||| ||||| | |||||| |||||||||||| |||||||||| || ||||| Sbjct: 922 tgctgttagtgttttggataggatggataaagatgtagatgatgcttgtactcaaggtat 981 Query: 855 tcctcaagcatcatcattggtttctgaccttcaagaacaggaagcagtcctcaagaactg 914 || |||| |||||| ||| ||||||||||||||| |||||| ||||||| ||| | || Sbjct: 982 tcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaagcagtg 1041 Query: 915 catcgagcaacttgaaagtgtcgatacagctaggacaaatctgattaatcaactaaaagt 974 ||| |||||||||||||||||| | | ||||| | || || || ||| |||||| | Sbjct: 1042 cattgagcaacttgaaagtgtcaacatggctagaataaccctaatcaataaactaagaaa 1101 Query: 975 agctctcagtgaacaggaagcaaagtcggagcttcttcgcactcagttgcaagttgctcg 1034 ||| ||| | ||||||||||||||||| ||||||||||||| |||||||| || ||||| Sbjct: 1102 agccctcggcgaacaggaagcaaagtcagagcttcttcgcaatcagttgcttgtggctcg 1161 Query: 1035 agcagaggctgaacatgccatgcaactcagacaacgacttggtggtgctcctgttacaaa 1094 |||| |||||||||||||||||||||| | ||||||||||||| ||| ||| | | || Sbjct: 1162 agcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtg--cct-tgaacaa 1218 Query: 1095 tggtgcaggctctagttctagtccatccatggttacatttacatcagagcaaacagctgc 1154 ||||||||| ||||||||||||||| ||||||||| || || ||| ||||||||||| Sbjct: 1219 tggtgcaggatctagttctagtccactgatggttacacttccaccaggacaaacagctgc 1278 Query: 1155 tgcggtgcagaattcagaagcaaggccaatatctcctcagtttcagccagtgcatcaagc 1214 | |||||||||||| ||||| ||| |||| ||| |||||||| ||| |||||| ||| Sbjct: 1279 catgatgcagaattcagcagcaatgccgatatttccccagtttcaaccactgcatccagc 1338 Query: 1215 gacctcacctcccaccatgaccagtgctatggttgatgagcccaagataaccgcagcagc 1274 ||||||| ||| ||| |||||||| | | |||||||||||| | ||| |||||||| Sbjct: 1339 aacctcacttcctgccacatccagtgctgttggtgatgagcccaaaaaaactgcagcagc 1398 Query: 1275 tatggcagataagcttgcatctttatcatctggccagcaagtgctgtcctccattttctc 1334 |||||||||||||||||||||||| ||| || || | ||||| |||||||||||||| Sbjct: 1399 tatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctccattttctc 1458 Query: 1335 atctcttgccgctgaacaagc 1355 || ||||| ||||||||||| Sbjct: 1459 ttcccttgctgctgaacaagc 1479 Score = 107 bits (54), Expect = 2e-19 Identities = 164/198 (82%), Gaps = 2/198 (1%) Strand = Plus / Plus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||||||||||||||||||||| || || || |||||||| || | Sbjct: 1900 ccagcagcagcagtctccacaggcaccacagcaatcgccgacctcgactggattttttca 1959 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | ||||||||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 1960 accaccaggtgctgggttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 2019 Query: 1902 gcaatgatg-ttatcttatgaatgtcggggtataaaggcagcagcttgtgctatctttgt 1960 ||||||||| || | | | ||| ||| |||||||| |||| ||||||||| |||||| Sbjct: 2020 gcaatgatgattctacaacaattgttgggctataaaggaagcaccttgtgctaactttgt 2079 Query: 1961 acatt-aacaataatccc 1977 | ||| |||||||||||| Sbjct: 2080 atattaaacaataatccc 2097 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||||||||||||||||||| Sbjct: 2175 ataggcttgcggcttatgtgatgtacaactgttccttttggtctga 2220 Score = 48.1 bits (24), Expect = 0.14 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1643 ctggaggaatgttcggaatgataccctttgggatgatggctggctctttgccacctccac 1702 ||||||||||||| |||||| ||| ||||||||| || ||||||| ||||||||||| Sbjct: 1746 ctggaggaatgtttggaatgggaccttttgggatggtgagtggctctgcgccacctccac 1805
>dbj|AK102595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098H20, full insert sequence Length = 2507 Score = 620 bits (313), Expect = e-174 Identities = 996/1221 (81%), Gaps = 12/1221 (0%) Strand = Plus / Plus Query: 144 cttcgtgatggcgggcacgaaggcggatgcgaaggcggatacca---gtggcggcggtgg 200 |||||||||||||| ||| |||||||| || |||||||| || | | |||||||| || Sbjct: 263 cttcgtgatggcggacaccaaggcggaggcaaaggcggaaactatcggcggcggcggcgg 322 Query: 201 cggctct------ttcagcgagaaggggcttgccgagaagctaactaaactcaacagctc 254 ||||||| ||||||||| ||| | ||| |||||||| | || ||||||| | | Sbjct: 323 cggctctggctcgttcagcgagcaggcgtttgttgagaagcttaacaagctcaacaacac 382 Query: 255 cgcggcgagcatccagacactttcacattggtgtgtttttcaccggaagagagccagaag 314 ||| | || ||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct: 383 ggcgactaggatccagacactttcaaattggtgcatttttcaccgaaagagagccagaaa 442 Query: 315 aatcgtcgacacatgggagaaacagtttaataatgcaacaaaggataagaaagtgtcatt 374 | || || ||||||||||| |||| ||| | ||||| |||||||||||||| ||||| Sbjct: 443 ggttgttgatacatgggagaagcagtataacagtgcaaataaggataagaaagtatcatt 502 Query: 375 cctgtatctatcaaatgacatcctgcaaaatagcaaacgcaagggtggagaatttgtgaa 434 |||||| || |||||||| |||||||||||||| ||||||||||| || || |||||||| Sbjct: 503 cctgtacctgtcaaatgatatcctgcaaaatagtaaacgcaagggaggggagtttgtgaa 562 Query: 435 tgagttctggaaggttcttcctggatcacttaaagatgttcatgatagcgggggagaaca 494 ||| || |||| |||||||||||||| | | ||||| || ||| | ||||||||| | Sbjct: 563 tgaattttggagggttcttcctggattattgaaagacttttatgtcaatgggggagaaga 622 Query: 495 tggaaagaaagtggtcgcaagattaatagggatttgggatgagcggaaggtttttggaac 554 |||||||||||| || | ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 623 tggaaagaaagtagttggaagattaatagatatttgggatgagcggaaggtctttggaac 682 Query: 555 ccgtattgagagcctaaaagttgacatccttggtgagaaccctcctacattggataacaa 614 ||||||||| || || ||| |||||| ||||||| | | ||| |||| ||| |||||| Sbjct: 683 ccgtattgaaagtctgaaaaatgacattcttggtggtagcactcatacaatgggtaacaa 742 Query: 615 tgataatggttcaaatcctagccctaatccctcttcaaatcccaaagctgttcggaagga 674 || ||| | |||||||| |||||||| ||||||||| | ||||||||| ||||| || Sbjct: 743 tgtcaatagctcaaatccaagccctaacccctcttcagtttccaaagctgcgcggaaaga 802 Query: 675 ttccagtacatatataaaagaactgactgtttgcgggatgcctgaaaagattgtgactgc 734 ||| ||||| | || | |||| |||||| |||||||||| ||||||||||| || || Sbjct: 803 ttctggtacagtaacaagaaaacttactgttggcgggatgccagaaaagattgtaacagc 862 Query: 735 atatcagtctgtagttgatcagtattttgacgaggacgcagctttaaacaaatgtaagac 794 | ||||||| || ||||||| ||||||| || ||| |||||||||||||||| || | Sbjct: 863 acatcagtcagtgcttgatcaacattttgatgaagacacagctttaaacaaatgcaataa 922 Query: 795 tactgttaatgtgttggagaagatggacaaagatgtagataatgcttgtacccatggtat 854 | |||||| ||| ||||| | |||||| |||||||||||| |||||||||| || ||||| Sbjct: 923 tgctgttagtgttttggataggatggataaagatgtagatgatgcttgtactcaaggtat 982 Query: 855 tcctcaagcatcatcattggtttctgaccttcaagaacaggaagcagtcctcaagaactg 914 || |||| |||||| ||| ||||||||||||||| |||||| ||||||| ||| | || Sbjct: 983 tcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaagcagtg 1042 Query: 915 catcgagcaacttgaaagtgtcgatacagctaggacaaatctgattaatcaactaaaagt 974 ||| |||||||||||||||||| | | ||||| | || || || ||| |||||| | Sbjct: 1043 cattgagcaacttgaaagtgtcaacatggctagaataaccctaatcaataaactaagaaa 1102 Query: 975 agctctcagtgaacaggaagcaaagtcggagcttcttcgcactcagttgcaagttgctcg 1034 ||| ||| | ||||||||||||||||| ||||||||||||| |||||||| || ||||| Sbjct: 1103 agccctcggcgaacaggaagcaaagtcagagcttcttcgcaatcagttgcttgtggctcg 1162 Query: 1035 agcagaggctgaacatgccatgcaactcagacaacgacttggtggtgctcctgttacaaa 1094 |||| |||||||||||||||||||||| | ||||||||||||| ||| ||| | | || Sbjct: 1163 agcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtg--cct-tgaacaa 1219 Query: 1095 tggtgcaggctctagttctagtccatccatggttacatttacatcagagcaaacagctgc 1154 ||||||||| ||||||||||||||| ||||||||| || || ||| ||||||||||| Sbjct: 1220 tggtgcaggatctagttctagtccactgatggttacacttccaccaggacaaacagctgc 1279 Query: 1155 tgcggtgcagaattcagaagcaaggccaatatctcctcagtttcagccagtgcatcaagc 1214 | |||||||||||| ||||| ||| |||| ||| |||||||| ||| |||||| ||| Sbjct: 1280 catgatgcagaattcagcagcaatgccgatatttccccagtttcaaccactgcatccagc 1339 Query: 1215 gacctcacctcccaccatgaccagtgctatggttgatgagcccaagataaccgcagcagc 1274 ||||||| ||| ||| |||||||| | | |||||||||||| | ||| |||||||| Sbjct: 1340 aacctcacttcctgccacatccagtgctgttggtgatgagcccaaaaaaactgcagcagc 1399 Query: 1275 tatggcagataagcttgcatctttatcatctggccagcaagtgctgtcctccattttctc 1334 |||||||||||||||||||||||| ||| || || | ||||| |||||||||||||| Sbjct: 1400 tatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctccattttctc 1459 Query: 1335 atctcttgccgctgaacaagc 1355 || ||||| ||||||||||| Sbjct: 1460 ttcccttgctgctgaacaagc 1480 Score = 107 bits (54), Expect = 2e-19 Identities = 164/198 (82%), Gaps = 2/198 (1%) Strand = Plus / Plus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||||||||||||||||||||| || || || |||||||| || | Sbjct: 1901 ccagcagcagcagtctccacaggcaccacagcaatcgccgacctcgactggattttttca 1960 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | ||||||||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 1961 accaccaggtgctgggttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 2020 Query: 1902 gcaatgatg-ttatcttatgaatgtcggggtataaaggcagcagcttgtgctatctttgt 1960 ||||||||| || | | | ||| ||| |||||||| |||| ||||||||| |||||| Sbjct: 2021 gcaatgatgattctacaacaattgttgggctataaaggaagcaccttgtgctaactttgt 2080 Query: 1961 acatt-aacaataatccc 1977 | ||| |||||||||||| Sbjct: 2081 atattaaacaataatccc 2098 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||||||||||||||||||| Sbjct: 2176 ataggcttgcggcttatgtgatgtacaactgttccttttggtctga 2221 Score = 48.1 bits (24), Expect = 0.14 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1643 ctggaggaatgttcggaatgataccctttgggatgatggctggctctttgccacctccac 1702 ||||||||||||| |||||| ||| ||||||||| || ||||||| ||||||||||| Sbjct: 1747 ctggaggaatgtttggaatgggaccttttgggatggtgagtggctctgcgccacctccac 1806
>ref|NM_001072180.1| Oryza sativa (japonica cultivar-group) Os11g0130100 (Os11g0130100) mRNA, complete cds Length = 1887 Score = 496 bits (250), Expect = e-136 Identities = 716/869 (82%), Gaps = 3/869 (0%) Strand = Plus / Plus Query: 487 ggagaacatggaaagaaagtggtcgcaagattaatagggatttgggatgagcggaaggtt 546 |||||| ||||||||||||| |||| ||||||||||| ||||||||||| |||||||| Sbjct: 1 ggagaagatggaaagaaagtagtcggaagattaatagatatttgggatgaacggaaggtc 60 Query: 547 tttggaacccgtattgagagcctaaaagttgacatccttggtgagaaccctcctacattg 606 ||||||||||||||||| || || |||| |||||| ||||||| | | ||| |||| || Sbjct: 61 tttggaacccgtattgaaagtctgaaagatgacattcttggtggtagcactcatacaatg 120 Query: 607 gataacaatgataatggttcaaatcctagccctaatccctcttcaaatcccaaagctgtt 666 | |||||||| ||| | |||||||| ||| || | ||||||||| | |||||||||| Sbjct: 121 ggtaacaatggcaatagctcaaatccaagctctcacccctcttcagtttccaaagctgtg 180 Query: 667 cggaaggattccagtacatatataaaagaactgactgtttgcgggatgcctgaaaagatt 726 || || ||||| ||||| | |||| |||| ||| || |||||||||| ||||||||| Sbjct: 181 cgaaaagattctggtacagtaacaaaaaaacttactattggcgggatgccagaaaagatt 240 Query: 727 gtgactgcatatcagtctgtagttgatcagtattttgacgaggacgcagctttaaacaaa 786 || || |||||||||||||| ||||||| |||||||||| ||| |||||||||||||| Sbjct: 241 gtaacagcatatcagtctgtgcttgatcaacattttgacgaagacacagctttaaacaaa 300 Query: 787 tgtaagactactgttaatgtgttggagaagatggacaaagatgtagataatgcttgtacc 846 || || | | |||||| ||| ||||| | |||||| |||||||||||| ||||||||||| Sbjct: 301 tgcaataatgctgttagtgttttggaaaggatggataaagatgtagatgatgcttgtacc 360 Query: 847 catggtattcctcaagcatcatcattggtttctgaccttcaagaacaggaagcagtcctc 906 || ||||||| |||| |||||| ||| ||||||||||||||| |||||| ||||||| Sbjct: 361 caaggtattcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtcctt 420 Query: 907 aagaactgcatcgagcaacttgaaagtgtcgatacagctaggacaaatctgattaatcaa 966 ||| | ||||| |||||||||||||||||| | | ||||| | || || || ||| || Sbjct: 421 aagcagtgcattgagcaacttgaaagtgtcaacatggctagaataaccctaatcaataaa 480 Query: 967 ctaaaagtagctctcagtgaacaggaagcaaagtcggagcttcttcgcactcagttgcaa 1026 |||| || ||| ||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 481 ctaagagaagccctcagcgaacaggaagcaaagtcagagcttcttcgcaatcagttgcat 540 Query: 1027 gttgctcgagcagaggctgaacatgccatgcaactcagacaacgacttggtggtgctcct 1086 || ||||||||| |||||||||||||||||||||| | ||||||||||||| ||| ||| Sbjct: 541 gtagctcgagcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtg--cct 598 Query: 1087 gttacaaatggtgcaggctctagttctagtccatccatggttacatttacatcagagcaa 1146 | | ||||||||||| ||||||||||||||| ||||||||| || || ||| ||| Sbjct: 599 -tgaacaatggtgcaggatctagttctagtccactgatggttacacttccaccaggacaa 657 Query: 1147 acagctgctgcggtgcagaattcagaagcaaggccaatatctcctcagtttcagccagtg 1206 |||||||| | |||||||||||| |||| |||||||| ||| || | ||| ||| || Sbjct: 658 acagctgccatgatgcagaattcagctgcaatgccaatatttccccactatcaaccactg 717 Query: 1207 catcaagcgacctcacctcccaccatgaccagtgctatggttgatgagcccaagataacc 1266 |||| ||| ||||||| ||| ||| | |||||| | | |||||||||||| | ||| Sbjct: 718 catccagcaacctcacttcctgccacatctagtgctgttggtgatgagcccaaaaaaact 777 Query: 1267 gcagcagctatggcagataagcttgcatctttatcatctggccagcaagtgctgtcctcc 1326 |||||||||||||||||||||||||||||||| ||| || || | ||||| |||||| Sbjct: 778 gcagcagctatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctcc 837 Query: 1327 attttctcatctcttgccgctgaacaagc 1355 |||||||| || ||||| ||||||||||| Sbjct: 838 attttctcgtcccttgctgctgaacaagc 866 Score = 81.8 bits (41), Expect = 1e-11 Identities = 107/129 (82%) Strand = Plus / Plus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||| ||||||||||||||||| || || || || ||||| || | Sbjct: 1287 ccagcagcagcagtctccgcaggcaccacagcaatcgccgacctcgacaggattttttca 1346 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | |||| |||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 1347 accaccaggtgctggcttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 1406 Query: 1902 gcaatgatg 1910 ||||||||| Sbjct: 1407 gcaatgatg 1415 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1462 gctccccctttctttgcccaagtaccacaagtgcaacaacagataggagc 1511 |||||||| ||||||| ||||||||||| ||||||| |||||| ||||| Sbjct: 973 gctcccccattctttgggcaagtaccacaggtgcaaccacagattggagc 1022 Score = 52.0 bits (26), Expect = 0.009 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||| ||||||||||||||| Sbjct: 1560 ataggcttgcggcttatgtgatgtacaactattccttttggtctga 1605
>dbj|AK063914.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A12, full insert sequence Length = 1886 Score = 480 bits (242), Expect = e-131 Identities = 715/869 (82%), Gaps = 4/869 (0%) Strand = Plus / Plus Query: 487 ggagaacatggaaagaaagtggtcgcaagattaatagggatttgggatgagcggaaggtt 546 |||||| ||||||||||||| |||| ||||||||||| ||||||||||| |||||||| Sbjct: 1 ggagaagatggaaagaaagtagtcggaagattaatagatatttgggatgaacggaaggtc 60 Query: 547 tttggaacccgtattgagagcctaaaagttgacatccttggtgagaaccctcctacattg 606 ||||||||||||||||| || || |||| |||||| ||||||| | | ||| |||| || Sbjct: 61 tttggaacccgtattgaaagtctgaaagatgacattcttggtggtagcactcatacaatg 120 Query: 607 gataacaatgataatggttcaaatcctagccctaatccctcttcaaatcccaaagctgtt 666 | |||||||| ||| | |||||||| ||| || | ||||||||| | |||||||||| Sbjct: 121 ggtaacaatggcaatagctcaaatccaagctctcacccctcttcagtttccaaagctgtg 180 Query: 667 cggaaggattccagtacatatataaaagaactgactgtttgcgggatgcctgaaaagatt 726 || || ||||| ||||| | |||| |||| ||| || |||||||||| ||||||||| Sbjct: 181 cgaaaagattctggtacagtaacaaaaaaacttactattggcgggatgccagaaaagatt 240 Query: 727 gtgactgcatatcagtctgtagttgatcagtattttgacgaggacgcagctttaaacaaa 786 || || |||||||||||||| ||||||| |||||||||| ||| |||||||||||||| Sbjct: 241 gtaacagcatatcagtctgtgcttgatcaacattttgacgaagacacagctttaaacaaa 300 Query: 787 tgtaagactactgttaatgtgttggagaagatggacaaagatgtagataatgcttgtacc 846 || || | | |||||| ||| ||||| | |||||| |||||||||||| ||||||||||| Sbjct: 301 tgcaataatgctgttagtgttttggaaaggatggataaagatgtagatgatgcttgtacc 360 Query: 847 catggtattcctcaagcatcatcattggtttctgaccttcaagaacaggaagcagtcctc 906 || ||||||| |||| |||||| ||| ||||||||||||||| |||||| ||||||| Sbjct: 361 caaggtattcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtcctt 420 Query: 907 aagaactgcatcgagcaacttgaaagtgtcgatacagctaggacaaatctgattaatcaa 966 ||| | ||||| |||||||||||||||||| | | ||||| | || || || ||| || Sbjct: 421 aagcagtgcattgagcaacttgaaagtgtcaacatggctagaataaccctaatcaataaa 480 Query: 967 ctaaaagtagctctcagtgaacaggaagcaaagtcggagcttcttcgcactcagttgcaa 1026 |||| || ||| ||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 481 ctaagagaagccctcagcgaacaggaagcaaagtcagagcttcttcgcaatcagttgcat 540 Query: 1027 gttgctcgagcagaggctgaacatgccatgcaactcagacaacgacttggtggtgctcct 1086 || ||||||||| |||||||||||||||||||||| | |||||||||| || ||| ||| Sbjct: 541 gtagctcgagcaaaggctgaacatgccatgcaactaaaacaacgactt-gtagtg--cct 597 Query: 1087 gttacaaatggtgcaggctctagttctagtccatccatggttacatttacatcagagcaa 1146 ||| |||||||||| ||||||||||||||| ||||||||| || || ||| ||| Sbjct: 598 tgaaca-atggtgcaggatctagttctagtccactgatggttacacttccaccaggacaa 656 Query: 1147 acagctgctgcggtgcagaattcagaagcaaggccaatatctcctcagtttcagccagtg 1206 |||||||| | |||||||||||| |||| |||||||| ||| || | ||| ||| || Sbjct: 657 acagctgccatgatgcagaattcagctgcaatgccaatatttccccactatcaaccactg 716 Query: 1207 catcaagcgacctcacctcccaccatgaccagtgctatggttgatgagcccaagataacc 1266 |||| ||| ||||||| ||| ||| | |||||| | | |||||||||||| | ||| Sbjct: 717 catccagcaacctcacttcctgccacatctagtgctgttggtgatgagcccaaaaaaact 776 Query: 1267 gcagcagctatggcagataagcttgcatctttatcatctggccagcaagtgctgtcctcc 1326 |||||||||||||||||||||||||||||||| ||| || || | ||||| |||||| Sbjct: 777 gcagcagctatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctcc 836 Query: 1327 attttctcatctcttgccgctgaacaagc 1355 |||||||| || ||||| ||||||||||| Sbjct: 837 attttctcgtcccttgctgctgaacaagc 865 Score = 81.8 bits (41), Expect = 1e-11 Identities = 107/129 (82%) Strand = Plus / Plus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||| ||||||||||||||||| || || || || ||||| || | Sbjct: 1286 ccagcagcagcagtctccgcaggcaccacagcaatcgccgacctcgacaggattttttca 1345 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | |||| |||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 1346 accaccaggtgctggcttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 1405 Query: 1902 gcaatgatg 1910 ||||||||| Sbjct: 1406 gcaatgatg 1414 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1462 gctccccctttctttgcccaagtaccacaagtgcaacaacagataggagc 1511 |||||||| ||||||| ||||||||||| ||||||| |||||| ||||| Sbjct: 972 gctcccccattctttgggcaagtaccacaggtgcaaccacagattggagc 1021 Score = 52.0 bits (26), Expect = 0.009 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||| ||||||||||||||| Sbjct: 1559 ataggcttgcggcttatgtgatgtacaactattccttttggtctga 1604
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 188 bits (95), Expect = 6e-44 Identities = 270/326 (82%), Gaps = 3/326 (0%) Strand = Plus / Minus Query: 1030 gctcgagcagaggctgaacatgccatgcaactcagacaacgacttggtggtgctcctgtt 1089 ||||||||| |||||||||||||||||||||| | ||||||||||||| |||| || Sbjct: 1293033 gctcgagcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtgc--cttga 1292976 Query: 1090 acaaatggtgcaggctctagttctagtccatccatggttacatttacatcagagcaaaca 1149 |||| ||||||||| ||||||||||||||| ||||||||| || || ||| |||||| Sbjct: 1292975 acaa-tggtgcaggatctagttctagtccactgatggttacacttccaccaggacaaaca 1292917 Query: 1150 gctgctgcggtgcagaattcagaagcaaggccaatatctcctcagtttcagccagtgcat 1209 ||||| | |||||||||||| ||||| ||| |||| ||| |||||||| ||| ||||| Sbjct: 1292916 gctgccatgatgcagaattcagcagcaatgccgatatttccccagtttcaaccactgcat 1292857 Query: 1210 caagcgacctcacctcccaccatgaccagtgctatggttgatgagcccaagataaccgca 1269 | ||| ||||||| ||| ||| |||||||| | | |||||||||||| | ||| ||| Sbjct: 1292856 ccagcaacctcacttcctgccacatccagtgctgttggtgatgagcccaaaaaaactgca 1292797 Query: 1270 gcagctatggcagataagcttgcatctttatcatctggccagcaagtgctgtcctccatt 1329 ||||||||||||||||||||||||||||| ||| || || | ||||| ||||||||| Sbjct: 1292796 gcagctatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctccatt 1292737 Query: 1330 ttctcatctcttgccgctgaacaagc 1355 ||||| || ||||| ||||||||||| Sbjct: 1292736 ttctcttcccttgctgctgaacaagc 1292711 Score = 167 bits (84), Expect = 2e-37 Identities = 207/248 (83%) Strand = Plus / Minus Query: 272 cactttcacattggtgtgtttttcaccggaagagagccagaagaatcgtcgacacatggg 331 |||||||| ||||||| |||||||||| ||||||||||||| | || || ||||||| Sbjct: 1296393 cactttcaaattggtgcatttttcaccgaaagagagccagaaaggttgttgatacatggg 1296334 Query: 332 agaaacagtttaataatgcaacaaaggataagaaagtgtcattcctgtatctatcaaatg 391 |||| |||| ||| | ||||| |||||||||||||| ||||||||||| || ||||||| Sbjct: 1296333 agaagcagtataacagtgcaaataaggataagaaagtatcattcctgtacctgtcaaatg 1296274 Query: 392 acatcctgcaaaatagcaaacgcaagggtggagaatttgtgaatgagttctggaaggttc 451 | |||||||||||||| ||||||||||| || || ||||||||||| || |||| ||||| Sbjct: 1296273 atatcctgcaaaatagtaaacgcaagggaggggagtttgtgaatgaattttggagggttc 1296214 Query: 452 ttcctggatcacttaaagatgttcatgatagcgggggagaacatggaaagaaagtggtcg 511 ||||||||| | | ||||| || ||| | ||||||||| ||||||||||||| || | Sbjct: 1296213 ttcctggattattgaaagacttttatgtcaatgggggagaagatggaaagaaagtagttg 1296154 Query: 512 caagatta 519 ||||||| Sbjct: 1296153 gaagatta 1296146 Score = 117 bits (59), Expect = 2e-22 Identities = 128/151 (84%) Strand = Plus / Minus Query: 695 aactgactgtttgcgggatgcctgaaaagattgtgactgcatatcagtctgtagttgatc 754 |||| |||||| |||||||||| ||||||||||| || ||||||||||| || |||||| Sbjct: 1295747 aacttactgttggcgggatgccagaaaagattgtaacagcatatcagtcagtgcttgatc 1295688 Query: 755 agtattttgacgaggacgcagctttaaacaaatgtaagactactgttaatgtgttggaga 814 | ||||||| || ||| |||||||||||||||| || | | |||||| ||| ||||| | Sbjct: 1295687 aacattttgatgaagacacagctttaaacaaatgcaataatgctgttagtgttttggata 1295628 Query: 815 agatggacaaagatgtagataatgcttgtac 845 |||||| |||||||||||| |||||||||| Sbjct: 1295627 ggatggataaagatgtagatgatgcttgtac 1295597 Score = 107 bits (54), Expect = 2e-19 Identities = 164/198 (82%), Gaps = 2/198 (1%) Strand = Plus / Minus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||||||||||||||||||||| || || || |||||||| || | Sbjct: 1292290 ccagcagcagcagtctccacaggcaccacagcaatcgccgacctcgactggattttttca 1292231 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | ||||||||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 1292230 accaccaggtgctgggttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 1292171 Query: 1902 gcaatgatg-ttatcttatgaatgtcggggtataaaggcagcagcttgtgctatctttgt 1960 ||||||||| || | | | ||| ||| |||||||| |||| ||||||||| |||||| Sbjct: 1292170 gcaatgatgattctacaacaattgttgggctataaaggaagcaccttgtgctaactttgt 1292111 Query: 1961 acatt-aacaataatccc 1977 | ||| |||||||||||| Sbjct: 1292110 atattaaacaataatccc 1292093 Score = 95.6 bits (48), Expect = 7e-16 Identities = 126/152 (82%) Strand = Plus / Minus Query: 526 atttgggatgagcggaaggtttttggaacccgtattgagagcctaaaagttgacatcctt 585 |||||||||||||||||||| ||||||||||||||||| || || ||| |||||| ||| Sbjct: 1296029 atttgggatgagcggaaggtctttggaacccgtattgaaagtctgaaaaatgacattctt 1295970 Query: 586 ggtgagaaccctcctacattggataacaatgataatggttcaaatcctagccctaatccc 645 |||| | | ||| |||| ||| |||||||| ||| | |||||||| |||||||| ||| Sbjct: 1295969 ggtggtagcactcatacaatgggtaacaatgtcaatagctcaaatccaagccctaacccc 1295910 Query: 646 tcttcaaatcccaaagctgttcggaaggattc 677 |||||| | ||||||||| ||||| ||||| Sbjct: 1295909 tcttcagtttccaaagctgcgcggaaagattc 1295878 Score = 77.8 bits (39), Expect = 2e-10 Identities = 75/87 (86%) Strand = Plus / Minus Query: 850 ggtattcctcaagcatcatcattggtttctgaccttcaagaacaggaagcagtcctcaag 909 ||||||| |||| |||||| ||| ||||||||||||||| |||||| ||||||| ||| Sbjct: 1294335 ggtattcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaag 1294276 Query: 910 aactgcatcgagcaacttgaaagtgtc 936 | ||||| |||||||||||||||||| Sbjct: 1294275 cagtgcattgagcaacttgaaagtgtc 1294249 Score = 61.9 bits (31), Expect = 9e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 986 aacaggaagcaaagtcggagcttcttcgcactcagttgc 1024 |||||||||||||||| ||||||||||||| |||||||| Sbjct: 1294103 aacaggaagcaaagtcagagcttcttcgcaatcagttgc 1294065 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||||||||||||||||||| Sbjct: 1292015 ataggcttgcggcttatgtgatgtacaactgttccttttggtctga 1291970 Score = 50.1 bits (25), Expect = 0.036 Identities = 52/61 (85%) Strand = Plus / Minus Query: 144 cttcgtgatggcgggcacgaaggcggatgcgaaggcggataccagtggcggcggtggcgg 203 |||||||||||||| ||| |||||||| || |||||||| || | |||||||| ||||| Sbjct: 1299597 cttcgtgatggcggacaccaaggcggaggcaaaggcggaaactatcggcggcggcggcgg 1299538 Query: 204 c 204 | Sbjct: 1299537 c 1299537 Score = 48.1 bits (24), Expect = 0.14 Identities = 51/60 (85%) Strand = Plus / Minus Query: 1643 ctggaggaatgttcggaatgataccctttgggatgatggctggctctttgccacctccac 1702 ||||||||||||| |||||| ||| ||||||||| || ||||||| ||||||||||| Sbjct: 1292444 ctggaggaatgtttggaatgggaccttttgggatggtgagtggctctgcgccacctccac 1292385
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 188 bits (95), Expect = 6e-44 Identities = 270/326 (82%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 1030 gctcgagcagaggctgaacatgccatgcaactcagacaacgacttggtggtgctcctgtt 1089 ||||||||| |||||||||||||||||||||| | ||||||||||||| |||| || Sbjct: 136136 gctcgagcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtgc--cttga 136193 Query: 1090 acaaatggtgcaggctctagttctagtccatccatggttacatttacatcagagcaaaca 1149 |||| ||||||||| ||||||||||||||| ||||||||| || || ||| |||||| Sbjct: 136194 acaa-tggtgcaggatctagttctagtccactgatggttacacttccaccaggacaaaca 136252 Query: 1150 gctgctgcggtgcagaattcagaagcaaggccaatatctcctcagtttcagccagtgcat 1209 ||||| | |||||||||||| ||||| ||| |||| ||| |||||||| ||| ||||| Sbjct: 136253 gctgccatgatgcagaattcagcagcaatgccgatatttccccagtttcaaccactgcat 136312 Query: 1210 caagcgacctcacctcccaccatgaccagtgctatggttgatgagcccaagataaccgca 1269 | ||| ||||||| ||| ||| |||||||| | | |||||||||||| | ||| ||| Sbjct: 136313 ccagcaacctcacttcctgccacatccagtgctgttggtgatgagcccaaaaaaactgca 136372 Query: 1270 gcagctatggcagataagcttgcatctttatcatctggccagcaagtgctgtcctccatt 1329 ||||||||||||||||||||||||||||| ||| || || | ||||| ||||||||| Sbjct: 136373 gcagctatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctccatt 136432 Query: 1330 ttctcatctcttgccgctgaacaagc 1355 ||||| || ||||| ||||||||||| Sbjct: 136433 ttctcttcccttgctgctgaacaagc 136458 Score = 167 bits (84), Expect = 2e-37 Identities = 207/248 (83%) Strand = Plus / Plus Query: 272 cactttcacattggtgtgtttttcaccggaagagagccagaagaatcgtcgacacatggg 331 |||||||| ||||||| |||||||||| ||||||||||||| | || || ||||||| Sbjct: 132776 cactttcaaattggtgcatttttcaccgaaagagagccagaaaggttgttgatacatggg 132835 Query: 332 agaaacagtttaataatgcaacaaaggataagaaagtgtcattcctgtatctatcaaatg 391 |||| |||| ||| | ||||| |||||||||||||| ||||||||||| || ||||||| Sbjct: 132836 agaagcagtataacagtgcaaataaggataagaaagtatcattcctgtacctgtcaaatg 132895 Query: 392 acatcctgcaaaatagcaaacgcaagggtggagaatttgtgaatgagttctggaaggttc 451 | |||||||||||||| ||||||||||| || || ||||||||||| || |||| ||||| Sbjct: 132896 atatcctgcaaaatagtaaacgcaagggaggggagtttgtgaatgaattttggagggttc 132955 Query: 452 ttcctggatcacttaaagatgttcatgatagcgggggagaacatggaaagaaagtggtcg 511 ||||||||| | | ||||| || ||| | ||||||||| ||||||||||||| || | Sbjct: 132956 ttcctggattattgaaagacttttatgtcaatgggggagaagatggaaagaaagtagttg 133015 Query: 512 caagatta 519 ||||||| Sbjct: 133016 gaagatta 133023 Score = 117 bits (59), Expect = 2e-22 Identities = 128/151 (84%) Strand = Plus / Plus Query: 695 aactgactgtttgcgggatgcctgaaaagattgtgactgcatatcagtctgtagttgatc 754 |||| |||||| |||||||||| ||||||||||| || ||||||||||| || |||||| Sbjct: 133422 aacttactgttggcgggatgccagaaaagattgtaacagcatatcagtcagtgcttgatc 133481 Query: 755 agtattttgacgaggacgcagctttaaacaaatgtaagactactgttaatgtgttggaga 814 | ||||||| || ||| |||||||||||||||| || | | |||||| ||| ||||| | Sbjct: 133482 aacattttgatgaagacacagctttaaacaaatgcaataatgctgttagtgttttggata 133541 Query: 815 agatggacaaagatgtagataatgcttgtac 845 |||||| |||||||||||| |||||||||| Sbjct: 133542 ggatggataaagatgtagatgatgcttgtac 133572 Score = 107 bits (54), Expect = 2e-19 Identities = 164/198 (82%), Gaps = 2/198 (1%) Strand = Plus / Plus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||||||||||||||||||||| || || || |||||||| || | Sbjct: 136879 ccagcagcagcagtctccacaggcaccacagcaatcgccgacctcgactggattttttca 136938 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | ||||||||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 136939 accaccaggtgctgggttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 136998 Query: 1902 gcaatgatg-ttatcttatgaatgtcggggtataaaggcagcagcttgtgctatctttgt 1960 ||||||||| || | | | ||| ||| |||||||| |||| ||||||||| |||||| Sbjct: 136999 gcaatgatgattctacaacaattgttgggctataaaggaagcaccttgtgctaactttgt 137058 Query: 1961 acatt-aacaataatccc 1977 | ||| |||||||||||| Sbjct: 137059 atattaaacaataatccc 137076 Score = 95.6 bits (48), Expect = 7e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 526 atttgggatgagcggaaggtttttggaacccgtattgagagcctaaaagttgacatcctt 585 |||||||||||||||||||| ||||||||||||||||| || || ||| |||||| ||| Sbjct: 133140 atttgggatgagcggaaggtctttggaacccgtattgaaagtctgaaaaatgacattctt 133199 Query: 586 ggtgagaaccctcctacattggataacaatgataatggttcaaatcctagccctaatccc 645 |||| | | ||| |||| ||| |||||||| ||| | |||||||| |||||||| ||| Sbjct: 133200 ggtggtagcactcatacaatgggtaacaatgtcaatagctcaaatccaagccctaacccc 133259 Query: 646 tcttcaaatcccaaagctgttcggaaggattc 677 |||||| | ||||||||| ||||| ||||| Sbjct: 133260 tcttcagtttccaaagctgcgcggaaagattc 133291 Score = 77.8 bits (39), Expect = 2e-10 Identities = 75/87 (86%) Strand = Plus / Plus Query: 850 ggtattcctcaagcatcatcattggtttctgaccttcaagaacaggaagcagtcctcaag 909 ||||||| |||| |||||| ||| ||||||||||||||| |||||| ||||||| ||| Sbjct: 134834 ggtattcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaag 134893 Query: 910 aactgcatcgagcaacttgaaagtgtc 936 | ||||| |||||||||||||||||| Sbjct: 134894 cagtgcattgagcaacttgaaagtgtc 134920 Score = 61.9 bits (31), Expect = 9e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 986 aacaggaagcaaagtcggagcttcttcgcactcagttgc 1024 |||||||||||||||| ||||||||||||| |||||||| Sbjct: 135066 aacaggaagcaaagtcagagcttcttcgcaatcagttgc 135104 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||||||||||||||||||| Sbjct: 137154 ataggcttgcggcttatgtgatgtacaactgttccttttggtctga 137199 Score = 50.1 bits (25), Expect = 0.036 Identities = 52/61 (85%) Strand = Plus / Plus Query: 144 cttcgtgatggcgggcacgaaggcggatgcgaaggcggataccagtggcggcggtggcgg 203 |||||||||||||| ||| |||||||| || |||||||| || | |||||||| ||||| Sbjct: 129572 cttcgtgatggcggacaccaaggcggaggcaaaggcggaaactatcggcggcggcggcgg 129631 Query: 204 c 204 | Sbjct: 129632 c 129632 Score = 48.1 bits (24), Expect = 0.14 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1643 ctggaggaatgttcggaatgataccctttgggatgatggctggctctttgccacctccac 1702 ||||||||||||| |||||| ||| ||||||||| || ||||||| ||||||||||| Sbjct: 136725 ctggaggaatgtttggaatgggaccttttgggatggtgagtggctctgcgccacctccac 136784
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 182 bits (92), Expect = 4e-42 Identities = 209/248 (84%) Strand = Plus / Minus Query: 272 cactttcacattggtgtgtttttcaccggaagagagccagaagaatcgtcgacacatggg 331 |||||||| ||||||| |||||||||| ||||||||||||| | || || ||||||| Sbjct: 6582 cactttcaaattggtgcatttttcaccgaaagagagccagaaaggttgttgatacatggg 6523 Query: 332 agaaacagtttaataatgcaacaaaggataagaaagtgtcattcctgtatctatcaaatg 391 |||| |||| ||| | ||||| |||||||||||||| ||||||||||| || ||||||| Sbjct: 6522 agaagcagtataacagtgcaaataaggataagaaagtatcattcctgtacctgtcaaatg 6463 Query: 392 acatcctgcaaaatagcaaacgcaagggtggagaatttgtgaatgagttctggaaggttc 451 | |||||||||||||| ||||||||||| || || ||||||||||| ||||||| ||||| Sbjct: 6462 atatcctgcaaaatagtaaacgcaagggaggggagtttgtgaatgaattctggagggttc 6403 Query: 452 ttcctggatcacttaaagatgttcatgatagcgggggagaacatggaaagaaagtggtcg 511 ||||||||| | | ||||| || ||| | ||||||||| ||||||||||||| |||| Sbjct: 6402 ttcctggattattgaaagacttttatgtcaatgggggagaagatggaaagaaagtagtcg 6343 Query: 512 caagatta 519 ||||||| Sbjct: 6342 gaagatta 6335 Score = 165 bits (83), Expect = 9e-37 Identities = 267/326 (81%), Gaps = 3/326 (0%) Strand = Plus / Minus Query: 1030 gctcgagcagaggctgaacatgccatgcaactcagacaacgacttggtggtgctcctgtt 1089 ||||||||| |||||||||||||||||||||| | ||||||||||||| |||| || Sbjct: 3232 gctcgagcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtgc--cttga 3175 Query: 1090 acaaatggtgcaggctctagttctagtccatccatggttacatttacatcagagcaaaca 1149 |||| ||||||||| ||||||||||||||| ||||||||| || || ||| |||||| Sbjct: 3174 acaa-tggtgcaggatctagttctagtccactgatggttacacttccaccaggacaaaca 3116 Query: 1150 gctgctgcggtgcagaattcagaagcaaggccaatatctcctcagtttcagccagtgcat 1209 ||||| | |||||||||||| |||| |||||||| ||| || | ||| ||| ||||| Sbjct: 3115 gctgccatgatgcagaattcagctgcaatgccaatatttccccactatcaaccactgcat 3056 Query: 1210 caagcgacctcacctcccaccatgaccagtgctatggttgatgagcccaagataaccgca 1269 | ||| ||||||| ||| ||| | |||||| | | |||||||||||| | ||| ||| Sbjct: 3055 ccagcaacctcacttcctgccacatctagtgctgttggtgatgagcccaaaaaaactgca 2996 Query: 1270 gcagctatggcagataagcttgcatctttatcatctggccagcaagtgctgtcctccatt 1329 ||||||||||||||||||||||||||||| ||| || || | ||||| ||||||||| Sbjct: 2995 gcagctatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctccatt 2936 Query: 1330 ttctcatctcttgccgctgaacaagc 1355 ||||| || ||||| ||||||||||| Sbjct: 2935 ttctcgtcccttgctgctgaacaagc 2910 Score = 133 bits (67), Expect = 3e-27 Identities = 127/147 (86%) Strand = Plus / Minus Query: 707 gcgggatgcctgaaaagattgtgactgcatatcagtctgtagttgatcagtattttgacg 766 |||||||||| ||||||||||| || |||||||||||||| ||||||| ||||||||| Sbjct: 5916 gcgggatgccagaaaagattgtaacagcatatcagtctgtgcttgatcaacattttgacg 5857 Query: 767 aggacgcagctttaaacaaatgtaagactactgttaatgtgttggagaagatggacaaag 826 | ||| |||||||||||||||| || | | |||||| ||| ||||| | |||||| |||| Sbjct: 5856 aagacacagctttaaacaaatgcaataatgctgttagtgttttggaaaggatggataaag 5797 Query: 827 atgtagataatgcttgtacccatggta 853 |||||||| ||||||||||||| |||| Sbjct: 5796 atgtagatgatgcttgtacccaaggta 5770 Score = 81.8 bits (41), Expect = 1e-11 Identities = 107/129 (82%) Strand = Plus / Minus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||| ||||||||||||||||| || || || || ||||| || | Sbjct: 2489 ccagcagcagcagtctccgcaggcaccacagcaatcgccgacctcgacaggattttttca 2430 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | |||| |||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 2429 accaccaggtgctggcttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 2370 Query: 1902 gcaatgatg 1910 ||||||||| Sbjct: 2369 gcaatgatg 2361 Score = 79.8 bits (40), Expect = 4e-11 Identities = 115/140 (82%) Strand = Plus / Minus Query: 526 atttgggatgagcggaaggtttttggaacccgtattgagagcctaaaagttgacatcctt 585 ||||||||||| |||||||| ||||||||||||||||| || || |||| |||||| ||| Sbjct: 6207 atttgggatgaacggaaggtctttggaacccgtattgaaagtctgaaagatgacattctt 6148 Query: 586 ggtgagaaccctcctacattggataacaatgataatggttcaaatcctagccctaatccc 645 |||| | | ||| |||| ||| |||||||| ||| | |||||||| ||| || | ||| Sbjct: 6147 ggtggtagcactcatacaatgggtaacaatggcaatagctcaaatccaagctctcacccc 6088 Query: 646 tcttcaaatcccaaagctgt 665 |||||| | |||||||||| Sbjct: 6087 tcttcagtttccaaagctgt 6068 Score = 77.8 bits (39), Expect = 2e-10 Identities = 75/87 (86%) Strand = Plus / Minus Query: 850 ggtattcctcaagcatcatcattggtttctgaccttcaagaacaggaagcagtcctcaag 909 ||||||| |||| |||||| ||| ||||||||||||||| |||||| ||||||| ||| Sbjct: 4539 ggtattcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaag 4480 Query: 910 aactgcatcgagcaacttgaaagtgtc 936 | ||||| |||||||||||||||||| Sbjct: 4479 cagtgcattgagcaacttgaaagtgtc 4453 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 986 aacaggaagcaaagtcggagcttcttcgcactcagttgca 1025 |||||||||||||||| ||||||||||||| ||||||||| Sbjct: 4305 aacaggaagcaaagtcagagcttcttcgcaatcagttgca 4266 Score = 52.0 bits (26), Expect = 0.009 Identities = 41/46 (89%) Strand = Plus / Minus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||| ||||||||||||||| Sbjct: 2216 ataggcttgcggcttatgtgatgtacaactattccttttggtctga 2171 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1462 gctccccctttctttgcccaagtaccacaagtgcaacaacagataggagc 1511 |||||||| ||||||| ||||||||||| ||||||| |||||| ||||| Sbjct: 2803 gctcccccattctttgggcaagtaccacaggtgcaaccacagattggagc 2754 Score = 46.1 bits (23), Expect = 0.56 Identities = 35/39 (89%) Strand = Plus / Minus Query: 144 cttcgtgatggcgggcacgaaggcggatgcgaaggcgga 182 |||||||||||||| ||| |||||||| || |||||||| Sbjct: 9248 cttcgtgatggcggacaccaaggcggacgccaaggcgga 9210
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence Length = 147941 Score = 182 bits (92), Expect = 4e-42 Identities = 209/248 (84%) Strand = Plus / Plus Query: 272 cactttcacattggtgtgtttttcaccggaagagagccagaagaatcgtcgacacatggg 331 |||||||| ||||||| |||||||||| ||||||||||||| | || || ||||||| Sbjct: 2828 cactttcaaattggtgcatttttcaccgaaagagagccagaaaggttgttgatacatggg 2887 Query: 332 agaaacagtttaataatgcaacaaaggataagaaagtgtcattcctgtatctatcaaatg 391 |||| |||| ||| | ||||| |||||||||||||| ||||||||||| || ||||||| Sbjct: 2888 agaagcagtataacagtgcaaataaggataagaaagtatcattcctgtacctgtcaaatg 2947 Query: 392 acatcctgcaaaatagcaaacgcaagggtggagaatttgtgaatgagttctggaaggttc 451 | |||||||||||||| ||||||||||| || || ||||||||||| ||||||| ||||| Sbjct: 2948 atatcctgcaaaatagtaaacgcaagggaggggagtttgtgaatgaattctggagggttc 3007 Query: 452 ttcctggatcacttaaagatgttcatgatagcgggggagaacatggaaagaaagtggtcg 511 ||||||||| | | ||||| || ||| | ||||||||| ||||||||||||| |||| Sbjct: 3008 ttcctggattattgaaagacttttatgtcaatgggggagaagatggaaagaaagtagtcg 3067 Query: 512 caagatta 519 ||||||| Sbjct: 3068 gaagatta 3075 Score = 165 bits (83), Expect = 9e-37 Identities = 267/326 (81%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 1030 gctcgagcagaggctgaacatgccatgcaactcagacaacgacttggtggtgctcctgtt 1089 ||||||||| |||||||||||||||||||||| | ||||||||||||| |||| || Sbjct: 6178 gctcgagcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtgc--cttga 6235 Query: 1090 acaaatggtgcaggctctagttctagtccatccatggttacatttacatcagagcaaaca 1149 |||| ||||||||| ||||||||||||||| ||||||||| || || ||| |||||| Sbjct: 6236 acaa-tggtgcaggatctagttctagtccactgatggttacacttccaccaggacaaaca 6294 Query: 1150 gctgctgcggtgcagaattcagaagcaaggccaatatctcctcagtttcagccagtgcat 1209 ||||| | |||||||||||| |||| |||||||| ||| || | ||| ||| ||||| Sbjct: 6295 gctgccatgatgcagaattcagctgcaatgccaatatttccccactatcaaccactgcat 6354 Query: 1210 caagcgacctcacctcccaccatgaccagtgctatggttgatgagcccaagataaccgca 1269 | ||| ||||||| ||| ||| | |||||| | | |||||||||||| | ||| ||| Sbjct: 6355 ccagcaacctcacttcctgccacatctagtgctgttggtgatgagcccaaaaaaactgca 6414 Query: 1270 gcagctatggcagataagcttgcatctttatcatctggccagcaagtgctgtcctccatt 1329 ||||||||||||||||||||||||||||| ||| || || | ||||| ||||||||| Sbjct: 6415 gcagctatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctccatt 6474 Query: 1330 ttctcatctcttgccgctgaacaagc 1355 ||||| || ||||| ||||||||||| Sbjct: 6475 ttctcgtcccttgctgctgaacaagc 6500 Score = 133 bits (67), Expect = 3e-27 Identities = 127/147 (86%) Strand = Plus / Plus Query: 707 gcgggatgcctgaaaagattgtgactgcatatcagtctgtagttgatcagtattttgacg 766 |||||||||| ||||||||||| || |||||||||||||| ||||||| ||||||||| Sbjct: 3494 gcgggatgccagaaaagattgtaacagcatatcagtctgtgcttgatcaacattttgacg 3553 Query: 767 aggacgcagctttaaacaaatgtaagactactgttaatgtgttggagaagatggacaaag 826 | ||| |||||||||||||||| || | | |||||| ||| ||||| | |||||| |||| Sbjct: 3554 aagacacagctttaaacaaatgcaataatgctgttagtgttttggaaaggatggataaag 3613 Query: 827 atgtagataatgcttgtacccatggta 853 |||||||| ||||||||||||| |||| Sbjct: 3614 atgtagatgatgcttgtacccaaggta 3640 Score = 81.8 bits (41), Expect = 1e-11 Identities = 107/129 (82%) Strand = Plus / Plus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||| ||||||||||||||||| || || || || ||||| || | Sbjct: 6921 ccagcagcagcagtctccgcaggcaccacagcaatcgccgacctcgacaggattttttca 6980 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | |||| |||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 6981 accaccaggtgctggcttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 7040 Query: 1902 gcaatgatg 1910 ||||||||| Sbjct: 7041 gcaatgatg 7049 Score = 79.8 bits (40), Expect = 4e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 526 atttgggatgagcggaaggtttttggaacccgtattgagagcctaaaagttgacatcctt 585 ||||||||||| |||||||| ||||||||||||||||| || || |||| |||||| ||| Sbjct: 3203 atttgggatgaacggaaggtctttggaacccgtattgaaagtctgaaagatgacattctt 3262 Query: 586 ggtgagaaccctcctacattggataacaatgataatggttcaaatcctagccctaatccc 645 |||| | | ||| |||| ||| |||||||| ||| | |||||||| ||| || | ||| Sbjct: 3263 ggtggtagcactcatacaatgggtaacaatggcaatagctcaaatccaagctctcacccc 3322 Query: 646 tcttcaaatcccaaagctgt 665 |||||| | |||||||||| Sbjct: 3323 tcttcagtttccaaagctgt 3342 Score = 77.8 bits (39), Expect = 2e-10 Identities = 75/87 (86%) Strand = Plus / Plus Query: 850 ggtattcctcaagcatcatcattggtttctgaccttcaagaacaggaagcagtcctcaag 909 ||||||| |||| |||||| ||| ||||||||||||||| |||||| ||||||| ||| Sbjct: 4871 ggtattcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaag 4930 Query: 910 aactgcatcgagcaacttgaaagtgtc 936 | ||||| |||||||||||||||||| Sbjct: 4931 cagtgcattgagcaacttgaaagtgtc 4957 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 986 aacaggaagcaaagtcggagcttcttcgcactcagttgca 1025 |||||||||||||||| ||||||||||||| ||||||||| Sbjct: 5105 aacaggaagcaaagtcagagcttcttcgcaatcagttgca 5144 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1462 gctccccctttctttgcccaagtaccacaagtgcaacaacagataggagc 1511 |||||||| ||||||| ||||||||||| ||||||| |||||| ||||| Sbjct: 6607 gctcccccattctttgggcaagtaccacaggtgcaaccacagattggagc 6656 Score = 52.0 bits (26), Expect = 0.009 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||| ||||||||||||||| Sbjct: 7194 ataggcttgcggcttatgtgatgtacaactattccttttggtctga 7239 Score = 46.1 bits (23), Expect = 0.56 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 cttcgtgatggcgggcacgaaggcggatgcgaaggcgga 182 |||||||||||||| ||| |||||||| || |||||||| Sbjct: 162 cttcgtgatggcggacaccaaggcggacgccaaggcgga 200
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 182 bits (92), Expect = 4e-42 Identities = 209/248 (84%) Strand = Plus / Minus Query: 272 cactttcacattggtgtgtttttcaccggaagagagccagaagaatcgtcgacacatggg 331 |||||||| ||||||| |||||||||| ||||||||||||| | || || ||||||| Sbjct: 1387787 cactttcaaattggtgcatttttcaccgaaagagagccagaaaggttgttgatacatggg 1387728 Query: 332 agaaacagtttaataatgcaacaaaggataagaaagtgtcattcctgtatctatcaaatg 391 |||| |||| ||| | ||||| |||||||||||||| ||||||||||| || ||||||| Sbjct: 1387727 agaagcagtataacagtgcaaataaggataagaaagtatcattcctgtacctgtcaaatg 1387668 Query: 392 acatcctgcaaaatagcaaacgcaagggtggagaatttgtgaatgagttctggaaggttc 451 | |||||||||||||| ||||||||||| || || ||||||||||| ||||||| ||||| Sbjct: 1387667 atatcctgcaaaatagtaaacgcaagggaggggagtttgtgaatgaattctggagggttc 1387608 Query: 452 ttcctggatcacttaaagatgttcatgatagcgggggagaacatggaaagaaagtggtcg 511 ||||||||| | | ||||| || ||| | ||||||||| ||||||||||||| |||| Sbjct: 1387607 ttcctggattattgaaagacttttatgtcaatgggggagaagatggaaagaaagtagtcg 1387548 Query: 512 caagatta 519 ||||||| Sbjct: 1387547 gaagatta 1387540 Score = 165 bits (83), Expect = 9e-37 Identities = 267/326 (81%), Gaps = 3/326 (0%) Strand = Plus / Minus Query: 1030 gctcgagcagaggctgaacatgccatgcaactcagacaacgacttggtggtgctcctgtt 1089 ||||||||| |||||||||||||||||||||| | ||||||||||||| |||| || Sbjct: 1384437 gctcgagcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtgc--cttga 1384380 Query: 1090 acaaatggtgcaggctctagttctagtccatccatggttacatttacatcagagcaaaca 1149 |||| ||||||||| ||||||||||||||| ||||||||| || || ||| |||||| Sbjct: 1384379 acaa-tggtgcaggatctagttctagtccactgatggttacacttccaccaggacaaaca 1384321 Query: 1150 gctgctgcggtgcagaattcagaagcaaggccaatatctcctcagtttcagccagtgcat 1209 ||||| | |||||||||||| |||| |||||||| ||| || | ||| ||| ||||| Sbjct: 1384320 gctgccatgatgcagaattcagctgcaatgccaatatttccccactatcaaccactgcat 1384261 Query: 1210 caagcgacctcacctcccaccatgaccagtgctatggttgatgagcccaagataaccgca 1269 | ||| ||||||| ||| ||| | |||||| | | |||||||||||| | ||| ||| Sbjct: 1384260 ccagcaacctcacttcctgccacatctagtgctgttggtgatgagcccaaaaaaactgca 1384201 Query: 1270 gcagctatggcagataagcttgcatctttatcatctggccagcaagtgctgtcctccatt 1329 ||||||||||||||||||||||||||||| ||| || || | ||||| ||||||||| Sbjct: 1384200 gcagctatggcagataagcttgcatctttgtcagctcctgagaaggtgctctcctccatt 1384141 Query: 1330 ttctcatctcttgccgctgaacaagc 1355 ||||| || ||||| ||||||||||| Sbjct: 1384140 ttctcgtcccttgctgctgaacaagc 1384115 Score = 133 bits (67), Expect = 3e-27 Identities = 127/147 (86%) Strand = Plus / Minus Query: 707 gcgggatgcctgaaaagattgtgactgcatatcagtctgtagttgatcagtattttgacg 766 |||||||||| ||||||||||| || |||||||||||||| ||||||| ||||||||| Sbjct: 1387121 gcgggatgccagaaaagattgtaacagcatatcagtctgtgcttgatcaacattttgacg 1387062 Query: 767 aggacgcagctttaaacaaatgtaagactactgttaatgtgttggagaagatggacaaag 826 | ||| |||||||||||||||| || | | |||||| ||| ||||| | |||||| |||| Sbjct: 1387061 aagacacagctttaaacaaatgcaataatgctgttagtgttttggaaaggatggataaag 1387002 Query: 827 atgtagataatgcttgtacccatggta 853 |||||||| ||||||||||||| |||| Sbjct: 1387001 atgtagatgatgcttgtacccaaggta 1386975 Score = 81.8 bits (41), Expect = 1e-11 Identities = 107/129 (82%) Strand = Plus / Minus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||| ||||||||||||||||| || || || || ||||| || | Sbjct: 1383694 ccagcagcagcagtctccgcaggcaccacagcaatcgccgacctcgacaggattttttca 1383635 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | |||| |||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 1383634 accaccaggtgctggcttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 1383575 Query: 1902 gcaatgatg 1910 ||||||||| Sbjct: 1383574 gcaatgatg 1383566 Score = 79.8 bits (40), Expect = 4e-11 Identities = 115/140 (82%) Strand = Plus / Minus Query: 526 atttgggatgagcggaaggtttttggaacccgtattgagagcctaaaagttgacatcctt 585 ||||||||||| |||||||| ||||||||||||||||| || || |||| |||||| ||| Sbjct: 1387412 atttgggatgaacggaaggtctttggaacccgtattgaaagtctgaaagatgacattctt 1387353 Query: 586 ggtgagaaccctcctacattggataacaatgataatggttcaaatcctagccctaatccc 645 |||| | | ||| |||| ||| |||||||| ||| | |||||||| ||| || | ||| Sbjct: 1387352 ggtggtagcactcatacaatgggtaacaatggcaatagctcaaatccaagctctcacccc 1387293 Query: 646 tcttcaaatcccaaagctgt 665 |||||| | |||||||||| Sbjct: 1387292 tcttcagtttccaaagctgt 1387273 Score = 77.8 bits (39), Expect = 2e-10 Identities = 75/87 (86%) Strand = Plus / Minus Query: 850 ggtattcctcaagcatcatcattggtttctgaccttcaagaacaggaagcagtcctcaag 909 ||||||| |||| |||||| ||| ||||||||||||||| |||||| ||||||| ||| Sbjct: 1385744 ggtattcagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaag 1385685 Query: 910 aactgcatcgagcaacttgaaagtgtc 936 | ||||| |||||||||||||||||| Sbjct: 1385684 cagtgcattgagcaacttgaaagtgtc 1385658 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 986 aacaggaagcaaagtcggagcttcttcgcactcagttgca 1025 |||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1385510 aacaggaagcaaagtcagagcttcttcgcaatcagttgca 1385471 Score = 52.0 bits (26), Expect = 0.009 Identities = 41/46 (89%) Strand = Plus / Minus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||| ||||||||||||||| Sbjct: 1383421 ataggcttgcggcttatgtgatgtacaactattccttttggtctga 1383376 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1462 gctccccctttctttgcccaagtaccacaagtgcaacaacagataggagc 1511 |||||||| ||||||| ||||||||||| ||||||| |||||| ||||| Sbjct: 1384008 gctcccccattctttgggcaagtaccacaggtgcaaccacagattggagc 1383959 Score = 46.1 bits (23), Expect = 0.56 Identities = 35/39 (89%) Strand = Plus / Minus Query: 144 cttcgtgatggcgggcacgaaggcggatgcgaaggcgga 182 |||||||||||||| ||| |||||||| || |||||||| Sbjct: 1390453 cttcgtgatggcggacaccaaggcggacgccaaggcgga 1390415
>dbj|AK111099.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-G11, full insert sequence Length = 738 Score = 182 bits (92), Expect = 4e-42 Identities = 312/385 (81%), Gaps = 9/385 (2%) Strand = Plus / Plus Query: 144 cttcgtgatggcgggcacgaaggcggatgcgaaggcggatacca---gtggcggcggtgg 200 |||||||||||||| ||| |||||||| || |||||||| || | | |||||||| || Sbjct: 261 cttcgtgatggcggacaccaaggcggaggcaaaggcggaaactatcggcggcggcggcgg 320 Query: 201 cggctct------ttcagcgagaaggggcttgccgagaagctaactaaactcaacagctc 254 ||||||| ||||||||| ||| | ||| |||||||| | || ||||||| | | Sbjct: 321 cggctctggctcgttcagcgagcaggcgtttgttgagaagcttaacaagctcaacaacac 380 Query: 255 cgcggcgagcatccagacactttcacattggtgtgtttttcaccggaagagagccagaag 314 ||| | || ||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct: 381 ggcgactaggatccagacactttcaaattggtgcatttttcaccgaaagagagccagaaa 440 Query: 315 aatcgtcgacacatgggagaaacagtttaataatgcaacaaaggataagaaagtgtcatt 374 | || || ||||||||||| |||| ||| | ||||| |||||||||||||| ||||| Sbjct: 441 ggttgttgatacatgggagaagcagtataacagtgcaaataaggataagaaagtatcatt 500 Query: 375 cctgtatctatcaaatgacatcctgcaaaatagcaaacgcaagggtggagaatttgtgaa 434 |||||| || |||||||| |||||||||||||| ||||||||||| || || |||||||| Sbjct: 501 cctgtacctgtcaaatgatatcctgcaaaatagtaaacgcaagggaggggagtttgtgaa 560 Query: 435 tgagttctggaaggttcttcctggatcacttaaagatgttcatgatagcgggggagaaca 494 ||| || |||| |||||||||||||| | | ||||| || ||| | ||||||||| | Sbjct: 561 tgaattttggagggttcttcctggattattgaaagacttttatgtcaatgggggagaaga 620 Query: 495 tggaaagaaagtggtcgcaagatta 519 |||||||||||| || | ||||||| Sbjct: 621 tggaaagaaagtagttggaagatta 645
>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121556 Score = 107 bits (54), Expect = 2e-19 Identities = 164/198 (82%), Gaps = 2/198 (1%) Strand = Plus / Plus Query: 1782 ccagcagcagcagtctccacaggcaccacagcaatctccaacatcaactggattcttccc 1841 |||||||||||||||||||||||||||||||||||| || || || |||||||| || | Sbjct: 492 ccagcagcagcagtctccacaggcaccacagcaatcgccgacctcgactggattttttca 551 Query: 1842 aacttcaagcactgggttcttccctccagttcaggtgcagcaatctccatccgtccagcg 1901 | | || | ||||||||||||| ||||| ||||| |||||||||||||| | ||| || Sbjct: 552 accaccaggtgctgggttcttcccaccagtgcaggttcagcaatctccatctgcccaacg 611 Query: 1902 gcaatgatg-ttatcttatgaatgtcggggtataaaggcagcagcttgtgctatctttgt 1960 ||||||||| || | | | ||| ||| |||||||| |||| ||||||||| |||||| Sbjct: 612 gcaatgatgattctacaacaattgttgggctataaaggaagcaccttgtgctaactttgt 671 Query: 1961 acatt-aacaataatccc 1977 | ||| |||||||||||| Sbjct: 672 atattaaacaataatccc 689 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 2038 ataggcgtacggcttgtgtgatgtataactgttccttttggtctga 2083 |||||| | |||||| ||||||||| |||||||||||||||||||| Sbjct: 767 ataggcttgcggcttatgtgatgtacaactgttccttttggtctga 812 Score = 50.1 bits (25), Expect = 0.036 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1315 gtgctgtcctccattttctcatctcttgccgctgaacaagc 1355 ||||| |||||||||||||| || ||||| ||||||||||| Sbjct: 31 gtgctctcctccattttctcttcccttgctgctgaacaagc 71 Score = 48.1 bits (24), Expect = 0.14 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1643 ctggaggaatgttcggaatgataccctttgggatgatggctggctctttgccacctccac 1702 ||||||||||||| |||||| ||| ||||||||| || ||||||| ||||||||||| Sbjct: 338 ctggaggaatgtttggaatgggaccttttgggatggtgagtggctctgcgccacctccac 397
>emb|CT971488.3| M.truncatula DNA sequence from clone MTH2-154I11 on chromosome 3, complete sequence Length = 75866 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 386 caaatgacatcctgcaaaatagcaaacgcaagggtggagaatttgtgaatgagttctgga 445 |||||||||||||||| || ||||| || || || |||||||||| ||| ||||||| Sbjct: 40955 caaatgacatcctgcagaacagcaagcgtaacggaaaggaatttgtgattgaattctgga 41014 Query: 446 aggttcttcctggatcacttaaagatgtt 474 |||||||||||| | |||||||||||||| Sbjct: 41015 aggttcttcctgcagcacttaaagatgtt 41043
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 56.0 bits (28), Expect = 6e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 986 aacaggaagcaaagtcggagcttcttcgcactcagttgca 1025 |||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 15891255 aacaggaaacaaagtcagagcttcttcgcaatcagttgca 15891294 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 25786091 aaccaccaccagcagcagcag 25786111
>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_F01 Length = 120026 Score = 56.0 bits (28), Expect = 6e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 986 aacaggaagcaaagtcggagcttcttcgcactcagttgca 1025 |||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 34930 aacaggaaacaaagtcagagcttcttcgcaatcagttgca 34969
>gb|AC154467.2| Mus musculus BAC clone RP24-151M24 from 14, complete sequence Length = 181941 Score = 50.1 bits (25), Expect = 0.036 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1771 cagaaccaccaccagcagcagcagt 1795 ||||||||||||||||||||||||| Sbjct: 159306 cagaaccaccaccagcagcagcagt 159330
>emb|CT010510.7| Mouse DNA sequence from clone RP23-306N20 on chromosome 14, complete sequence Length = 217241 Score = 50.1 bits (25), Expect = 0.036 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1771 cagaaccaccaccagcagcagcagt 1795 ||||||||||||||||||||||||| Sbjct: 103539 cagaaccaccaccagcagcagcagt 103515
>ref|XM_705116.1| Candida albicans SC5314 hypothetical protein (CaO19.3486), mRNA Length = 2448 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1770 gcagaaccaccaccagcagcagca 1793 |||||||||||||||||||||||| Sbjct: 2291 gcagaaccaccaccagcagcagca 2268
>gb|AY112060.1| Zea mays CL36178_1 mRNA sequence Length = 643 Score = 48.1 bits (24), Expect = 0.14 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1672 gggatgatggctggctctttgccacctccacttccattgt 1711 |||||||||||||| ||| |||||||||| | |||||||| Sbjct: 584 gggatgatggctggatctatgccacctccgcctccattgt 545
>gb|AY110510.1| Zea mays CL31753_1 mRNA sequence Length = 1159 Score = 48.1 bits (24), Expect = 0.14 Identities = 42/48 (87%) Strand = Plus / Minus Query: 1249 gatgagcccaagataaccgcagcagctatggcagataagcttgcatct 1296 ||||||||||||| ||| |||||||| ||||| || ||||| |||||| Sbjct: 1070 gatgagcccaagagaacggcagcagcaatggccgacaagctggcatct 1023
>gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, complete sequence Length = 153860 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1772 agaaccaccaccagcagcagcag 1794 ||||||||||||||||||||||| Sbjct: 45961 agaaccaccaccagcagcagcag 45983
>gb|AC102730.15| Mus musculus chromosome 5, clone RP24-194J15, complete sequence Length = 167135 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1772 agaaccaccaccagcagcagcag 1794 ||||||||||||||||||||||| Sbjct: 67200 agaaccaccaccagcagcagcag 67178
>ref|XM_783226.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC583312 (LOC583312), partial mRNA Length = 7236 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcag 1791 |||||||||||||||||||||| Sbjct: 6318 gcagaaccaccaccagcagcag 6339
>ref|XM_001179661.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC583312 (LOC583312), partial mRNA Length = 7236 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcag 1791 |||||||||||||||||||||| Sbjct: 6318 gcagaaccaccaccagcagcag 6339
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagtc 1796 |||||||||||||||||||||| Sbjct: 5207609 accaccaccagcagcagcagtc 5207588 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1741 ccgccgcctccacctcctctgccac 1765 ||||||||||||||||| ||||||| Sbjct: 17892750 ccgccgcctccacctccgctgccac 17892774
>gb|AC168879.4| Mus musculus BAC clone RP24-407B6 from chromosome 13, complete sequence Length = 169877 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1773 gaaccaccaccagcagcagcag 1794 |||||||||||||||||||||| Sbjct: 29973 gaaccaccaccagcagcagcag 29952
>gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete sequence Length = 171235 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagtc 1796 |||||||||||||||||||||| Sbjct: 67729 accaccaccagcagcagcagtc 67708
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagtc 1796 |||||||||||||||||||||| Sbjct: 37172 accaccaccagcagcagcagtc 37193
>gb|AC121583.3| Mus musculus BAC clone RP23-259K16 from 13, complete sequence Length = 207129 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1773 gaaccaccaccagcagcagcag 1794 |||||||||||||||||||||| Sbjct: 150397 gaaccaccaccagcagcagcag 150376
>gb|AC098709.3| Mus musculus BAC clone RP23-1K14 from 1, complete sequence Length = 189774 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1741 ccgccgcctccacctcctctgccacc 1766 ||||| |||||||||||||||||||| Sbjct: 20705 ccgccacctccacctcctctgccacc 20680
>ref|NM_136636.3| Drosophila melanogaster CG13739-RA (CG13739), mRNA Length = 4398 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagtc 1796 |||||||||||||||||||||| Sbjct: 1835 accaccaccagcagcagcagtc 1856
>dbj|AK169239.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920097C16 product:DEAH (Asp-Glu-Ala-His) box polypeptide 9, full insert sequence Length = 1484 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1741 ccgccgcctccacctcctctgccacc 1766 ||||| |||||||||||||||||||| Sbjct: 800 ccgccacctccacctcctctgccacc 775
>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome Length = 190289 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1741 ccgccgcctccacctcctctgccacc 1766 ||||||||||||||||||| |||||| Sbjct: 178042 ccgccgcctccacctcctccgccacc 178067
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagtc 1796 |||||||||||||||||||||| Sbjct: 32797245 accaccaccagcagcagcagtc 32797224 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1276 atggcagataagcttgcatct 1296 ||||||||||||||||||||| Sbjct: 3633087 atggcagataagcttgcatct 3633067
>emb|AL445123.11| Human DNA sequence from clone RP11-242F11 on chromosome 6 Contains the 3' part of a novel gene and a novel gene, complete sequence Length = 120709 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1618 caatttagtcaaaatactggag 1639 |||||||||||||||||||||| Sbjct: 5438 caatttagtcaaaatactggag 5417
>ref|XM_684580.1| PREDICTED: Danio rerio similar to KH-type splicing regulatory protein (FUSE binding protein 2) (LOC573065), mRNA Length = 3787 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1740 accgccgcctccacctcctctgccacccat 1769 |||||||||||||||||||| |||||||| Sbjct: 1749 accgccgcctccacctcctccaccacccat 1720
>ref|XM_685273.1| PREDICTED: Danio rerio similar to KH-type splicing regulatory protein (FUSE binding protein 2) (LOC573145), mRNA Length = 3355 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1740 accgccgcctccacctcctctgccacccat 1769 |||||||||||||||||||| |||||||| Sbjct: 1317 accgccgcctccacctcctccaccacccat 1288
>gb|AY060326.1| Drosophila melanogaster GH21254 full length cDNA Length = 2563 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagtc 1796 |||||||||||||||||||||| Sbjct: 1835 accaccaccagcagcagcagtc 1856
>gb|U86888.1|MCU86888 Molluscum contagiosum virus subtype 1 clone H-H hypothetical protein (H-H2.2) and hypothetical protein (H-H2.1) genes, partial cds Length = 919 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1741 ccgccgcctccacctcctctgccacc 1766 ||||||||||||||||||| |||||| Sbjct: 786 ccgccgcctccacctcctccgccacc 761
>gb|AY107574.1| Zea mays PCO137295 mRNA sequence Length = 719 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1773 gaaccaccaccagcagcagcag 1794 |||||||||||||||||||||| Sbjct: 276 gaaccaccaccagcagcagcag 297
>gb|AC099712.21| Mus musculus chromosome 1, clone RP23-400C10, complete sequence Length = 196059 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1741 ccgccgcctccacctcctctgccacc 1766 ||||| |||||||||||||||||||| Sbjct: 71280 ccgccacctccacctcctctgccacc 71305
>gb|AC173210.3| Mus musculus BAC clone RP23-29I5 from chromosome 13, complete sequence Length = 228881 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1773 gaaccaccaccagcagcagcag 1794 |||||||||||||||||||||| Sbjct: 59468 gaaccaccaccagcagcagcag 59447
>ref|NM_007842.1| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Dhx9), mRNA gb|U91922.1|MMU91922 Mus musculus RNA helicase A (Ddx9) mRNA, complete cds Length = 4498 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1741 ccgccgcctccacctcctctgccacc 1766 ||||| |||||||||||||||||||| Sbjct: 3877 ccgccacctccacctcctctgccacc 3852
>emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 in linkage group 1, complete sequence Length = 229480 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1740 accgccgcctccacctcctctgccacccat 1769 |||||||||||||||||||| |||||||| Sbjct: 60667 accgccgcctccacctcctccaccacccat 60638
>emb|CR931959.16| Zebrafish DNA sequence from clone DKEY-261G17 in linkage group 11, complete sequence Length = 58276 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 agcatccagacactttcacat 282 ||||||||||||||||||||| Sbjct: 22177 agcatccagacactttcacat 22197
>gb|AC187855.2| Populus trichocarpa clone Pop1-121E8, complete sequence Length = 86881 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 73407 aaccaccaccagcagcagcag 73387
>emb|CT832495.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA244L24, full insert sequence Length = 2245 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1276 atggcagataagcttgcatct 1296 ||||||||||||||||||||| Sbjct: 1968 atggcagataagcttgcatct 1948
>emb|CT832494.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA239E03, full insert sequence Length = 2225 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1276 atggcagataagcttgcatct 1296 ||||||||||||||||||||| Sbjct: 2104 atggcagataagcttgcatct 2084
>ref|XM_001226082.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10816) mRNA, complete cds Length = 1734 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 769 aaccaccaccagcagcagcag 789
>ref|XM_001222467.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_06373) mRNA, complete cds Length = 873 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 394 accaccaccagcagcagcagt 414
>dbj|AK236987.1| Sus scrofa mRNA, clone:PBL010066F10, expressed in periphral blood mononuclear cell Length = 2555 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 369 accaccaccagcagcagcagt 389
>ref|NM_001055617.1| Oryza sativa (japonica cultivar-group) Os03g0167500 (Os03g0167500) mRNA, complete cds Length = 2143 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1276 atggcagataagcttgcatct 1296 ||||||||||||||||||||| Sbjct: 1868 atggcagataagcttgcatct 1848
>gb|AC188672.3| Pan troglodytes BAC clone CH251-322P18 from chromosome 7, complete sequence Length = 146817 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1321 tcctccattttctcatctctt 1341 ||||||||||||||||||||| Sbjct: 109731 tcctccattttctcatctctt 109711
>ref|XR_025202.1| PREDICTED: Pan troglodytes similar to KIAA0346 (LOC468438), mRNA Length = 5426 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 1443 accaccaccagcagcagcagt 1463
>gb|AC186041.3| Pan troglodytes BAC clone CH251-552F14 from chromosome 20, complete sequence Length = 217964 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1321 tcctccattttctcatctctt 1341 ||||||||||||||||||||| Sbjct: 34308 tcctccattttctcatctctt 34328
>ref|XM_941783.2| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 3 (JMJD3), mRNA Length = 6711 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 1568 accaccaccagcagcagcagt 1588
>ref|XM_043272.11| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 1 (JMJD3), mRNA Length = 6704 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 1562 accaccaccagcagcagcagt 1582
>gb|AC152964.17| Medicago truncatula chromosome 8 clone mth2-82o6 map 3.000cM, complete sequence Length = 105861 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 884 ttcaagaacaggaagcagtcc 904 ||||||||||||||||||||| Sbjct: 18552 ttcaagaacaggaagcagtcc 18572
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 14414815 aaccaccaccagcagcagcag 14414835
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||||| |||||||||||||||||| Sbjct: 7154667 gcagaagcaccaccagcagcagcag 7154643 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 18757137 aaccaccaccagcagcagcag 18757117 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1777 caccaccagcagcagcagtctccac 1801 |||||||||||||||||| |||||| Sbjct: 20155842 caccaccagcagcagcagcctccac 20155818
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 6587042 gcagcaccaccaccagcagcagcag 6587018
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1938 gcagcagcttgtgctatcttt 1958 ||||||||||||||||||||| Sbjct: 14300490 gcagcagcttgtgctatcttt 14300510
>tpg|BK005078.1| TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 75 (WRKY75) gene, complete cds Length = 4697 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 70 aaccaccaccagcagcagcag 50
>dbj|AK228237.1| Arabidopsis thaliana mRNA for similar to MAP/ERK kinase kinase 3, partial cds, clone: RAFL14-68-O21 Length = 1581 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 858 tcaagcatcatcattggtttc 878 ||||||||||||||||||||| Sbjct: 99 tcaagcatcatcattggtttc 79
>ref|XM_001079385.1| PREDICTED: Rattus norvegicus jumonji domain containing 3 (predicted) (Jmjd3_predicted), mRNA Length = 5299 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 1822 aaccaccaccagcagcagcag 1842
>ref|XM_343919.3| PREDICTED: Rattus norvegicus jumonji domain containing 3 (predicted) (Jmjd3_predicted), mRNA Length = 4776 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 1482 aaccaccaccagcagcagcag 1502
>ref|XM_001097359.1| PREDICTED: Macaca mulatta similar to olfactory receptor 283 (LOC708857), mRNA Length = 1071 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 243 aaccaccaccagcagcagcag 223
>emb|CT030013.7| Mouse DNA sequence from clone RP23-282P19 on chromosome 2, complete sequence Length = 197845 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 67500 aaccaccaccagcagcagcag 67480
>gb|AC183593.2| Pan troglodytes BAC clone CH251-685P8 from chromosome 20, complete sequence Length = 228246 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1321 tcctccattttctcatctctt 1341 ||||||||||||||||||||| Sbjct: 18424 tcctccattttctcatctctt 18404
>ref|XM_980983.1| PREDICTED: Mus musculus hypothetical protein LOC670377 (LOC670377), mRNA Length = 1740 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 755 gcagcaccaccaccagcagcagcag 779
>ref|XM_979476.1| PREDICTED: Mus musculus hypothetical protein LOC665791 (LOC665791), mRNA Length = 585 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 512 gcagcaccaccaccagcagcagcag 536
>emb|AJ893534.1| Lepus crawshayi partial ar gene for androgen receptor, exon 1 Length = 1380 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 462 gcagcaccaccaccagcagcagcag 486
>ref|NM_103808.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT1G49180) mRNA, complete cds Length = 1498 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 858 tcaagcatcatcattggtttc 878 ||||||||||||||||||||| Sbjct: 99 tcaagcatcatcattggtttc 79
>gb|BC106400.1| Xenopus laevis iodothyronine 5-deiodinase type III, mRNA (cDNA clone MGC:131024 IMAGE:7980100), complete cds Length = 1595 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 917 aaccaccaccagcagcagcag 937
>ref|XM_631832.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0187722) mRNA, complete cds Length = 2520 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2200 cccaatgatgttaacatttta 2220 ||||||||||||||||||||| Sbjct: 872 cccaatgatgttaacatttta 852
>gb|AY773284.1| Lampetra fluviatilis thyroid transcription factor 1 (TTF1) mRNA, complete cds Length = 1280 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 984 aaccaccaccagcagcagcag 1004
>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence Length = 245358 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 122972 aaccaccaccagcagcagcag 122992 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 123050 aaccaccaccagcagcagcag 123070
>gb|AC115830.6| Mus musculus chromosome 7, clone RP24-96A19, complete sequence Length = 153718 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 722 agattgtgactgcatatcagt 742 ||||||||||||||||||||| Sbjct: 56576 agattgtgactgcatatcagt 56596
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 48569 aaccaccaccagcagcagcag 48589
>gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence Length = 154240 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1776 ccaccaccagcagcagcagtc 1796 ||||||||||||||||||||| Sbjct: 143751 ccaccaccagcagcagcagtc 143771
>gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7, complete sequence Length = 175357 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1776 ccaccaccagcagcagcagtc 1796 ||||||||||||||||||||| Sbjct: 2420 ccaccaccagcagcagcagtc 2440
>gb|AC111100.13| Mus musculus chromosome 3, clone RP23-179J8, complete sequence Length = 216852 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 175564 aaccaccaccagcagcagcag 175544
>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0109A13, complete sequence Length = 134258 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 41040 aaccaccaccagcagcagcag 41020
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 150112 aaccaccaccagcagcagcag 150092
>gb|AC119884.13| Mus musculus chromosome 15, clone RP24-213O5, complete sequence Length = 168400 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 77841 accaccaccagcagcagcagt 77861
>gb|AC113092.25| Mus musculus chromosome 6, clone RP23-309N11, complete sequence Length = 186431 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 129220 aaccaccaccagcagcagcag 129200
>gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, complete sequence Length = 192016 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 155952 aaccaccaccagcagcagcag 155932 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 156030 aaccaccaccagcagcagcag 156010
>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence Length = 171563 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1938 gcagcagcttgtgctatcttt 1958 ||||||||||||||||||||| Sbjct: 140877 gcagcagcttgtgctatcttt 140897
>gb|AC009736.10| Drosophila melanogaster clone BACR10A04, complete sequence Length = 165489 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1938 gcagcagcttgtgctatcttt 1958 ||||||||||||||||||||| Sbjct: 22137 gcagcagcttgtgctatcttt 22157
>gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence Length = 125927 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||||||| |||||||||||||||| Sbjct: 114566 gcagaaccgccaccagcagcagcag 114590
>gb|AC164306.3| Mus musculus BAC clone RP23-190A21 from chromosome 17, complete sequence Length = 206180 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 161512 aaccaccaccagcagcagcag 161532
>gb|AC132333.3| Mus musculus BAC clone RP24-226I7 from chromosome 7, complete sequence Length = 170540 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 722 agattgtgactgcatatcagt 742 ||||||||||||||||||||| Sbjct: 167863 agattgtgactgcatatcagt 167883
>gb|AC121933.3| Mus musculus BAC clone RP24-206I11 from chromosome 8, complete sequence Length = 182816 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1112 ctagtccatccatggttacat 1132 ||||||||||||||||||||| Sbjct: 165752 ctagtccatccatggttacat 165772
>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence Length = 180155 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 42744 accaccaccagcagcagcagt 42724
>ref|NM_168775.1| Drosophila melanogaster ftz transcription factor 1 CG4059-RA, transcript variant A (ftz-f1), mRNA Length = 3269 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 374 aaccaccaccagcagcagcag 394
>gb|AC098706.3| Mus musculus BAC clone RP23-1I11 from 14, complete sequence Length = 234326 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1070 gacttggtggtgctcctgtta 1090 ||||||||||||||||||||| Sbjct: 92547 gacttggtggtgctcctgtta 92567
>ref|XM_546599.2| PREDICTED: Canis familiaris similar to jumonji domain containing 3 (LOC489481), mRNA Length = 5371 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 1432 accaccaccagcagcagcagt 1452
>ref|NM_140926.1| Drosophila melanogaster CG13811-RA (CG13811), mRNA Length = 1812 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1777 caccaccagcagcagcagtctccac 1801 |||||||||||||||||| |||||| Sbjct: 1429 caccaccagcagcagcagcctccac 1453
>ref|NM_139827.1| Drosophila melanogaster CG17742-RA (CG17742), mRNA Length = 459 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||||| |||||||||||||||||| Sbjct: 249 gcagaagcaccaccagcagcagcag 273
>gb|AC064862.6| Homo sapiens BAC clone RP11-368M16 from 7, complete sequence Length = 175895 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1321 tcctccattttctcatctctt 1341 ||||||||||||||||||||| Sbjct: 128503 tcctccattttctcatctctt 128523
>gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complete sequence Length = 115003 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 66883 aaccaccaccagcagcagcag 66903
>ref|NM_137784.1| Drosophila melanogaster CG13499-RB, transcript variant B (CG13499), mRNA Length = 854 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1741 ccgccgcctccacctcctctgccac 1765 ||||||||||||||||| ||||||| Sbjct: 514 ccgccgcctccacctccgctgccac 490
>gb|BC052407.1| Mus musculus forkhead box P4, mRNA (cDNA clone MGC:63441 IMAGE:5716170), complete cds Length = 3213 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 2572 aaccaccaccagcagcagcag 2592
>gb|BC057110.1| Mus musculus forkhead box P4, mRNA (cDNA clone MGC:61328 IMAGE:6417088), complete cds Length = 4057 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 2730 aaccaccaccagcagcagcag 2750
>gb|BC043702.1| Mus musculus forkhead box P4, mRNA (cDNA clone MGC:49356 IMAGE:5351757), complete cds Length = 2908 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 2507 aaccaccaccagcagcagcag 2527
>ref|NM_132114.1| Drosophila melanogaster CG14442-RA (CG14442), mRNA Length = 4747 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 1974 gcagcaccaccaccagcagcagcag 1998
>gb|AC164642.3| Mus musculus BAC clone RP23-248L4 from chromosome 6, complete sequence Length = 212166 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 25065 aaccaccaccagcagcagcag 25045
>gb|AC165082.2| Mus musculus BAC clone RP23-412H17 from chromosome 17, complete sequence Length = 196132 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 148290 aaccaccaccagcagcagcag 148270 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 148362 aaccaccaccagcagcagcag 148342
>gb|AF317661.1| Candida albicans 60S acidic ribosomal protein type P2-A (p2A) gene, complete cds Length = 476 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||||| |||||||||||||||||| Sbjct: 349 gcagaagcaccaccagcagcagcag 325
>gb|BC052099.1| Homo sapiens hypothetical protein LOC285972, mRNA (cDNA clone IMAGE:5221212), partial cds Length = 1749 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 897 aaccaccaccagcagcagcag 917
>dbj|AK097158.1| Homo sapiens cDNA FLJ39839 fis, clone SPLEN2014136 Length = 1945 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 799 aaccaccaccagcagcagcag 819
>dbj|AB232923.1| Oryzias latipes hox gene cluster, complete cds, contains hoxDa Length = 225033 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1741 ccgccgcctccacctcctctg 1761 ||||||||||||||||||||| Sbjct: 197592 ccgccgcctccacctcctctg 197572
>dbj|AK143194.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130305E05 product:forkhead box P4, full insert sequence Length = 3202 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 2581 aaccaccaccagcagcagcag 2601
>gb|AC163199.8| Mus musculus 6 BAC RP23-333F8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233589 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 121353 aaccaccaccagcagcagcag 121333
>gb|AC104581.22| Homo sapiens chromosome 17, clone RP11-1099M24, complete sequence Length = 187718 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 10618 accaccaccagcagcagcagt 10638
>gb|AC108856.20| Mus musculus chromosome 8, clone RP24-355A11, complete sequence Length = 203330 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 7341 accaccaccagcagcagcagt 7361
>ref|NM_001017426.1| Mus musculus jumonji domain containing 3 (Jmjd3), mRNA Length = 6654 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 2063 aaccaccaccagcagcagcag 2083
>gb|AY920701.1| Haemophilus influenzae strain 56P34H1 outer membrane protein P2 gene, partial cds Length = 453 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 165 accaccaccagcagcagcagt 145
>gb|AC079061.8| Homo sapiens chromosome 8, clone RP11-422N16, complete sequence Length = 202392 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 161550 aaccaccaccagcagcagcag 161530
>gb|AC069079.11| Homo sapiens chromosome 10 clone RP11-539E19, complete sequence Length = 216006 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 946 aggacaaatctgattaatcaa 966 ||||||||||||||||||||| Sbjct: 8086 aggacaaatctgattaatcaa 8066
>gb|AC087558.13| Mus musculus strain C57BL/6J chromosome 2 clone rp23-282p18, complete sequence Length = 217766 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 67495 aaccaccaccagcagcagcag 67475
>gb|AC010331.8| Homo sapiens chromosome 19 clone CTD-3001H11, complete sequence Length = 114491 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1321 tcctccattttctcatctctt 1341 ||||||||||||||||||||| Sbjct: 79222 tcctccattttctcatctctt 79202
>gb|AC010115.6| Drosophila melanogaster 3L BAC RP98-16I16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180821 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||||| |||||||||||||||||| Sbjct: 147728 gcagaagcaccaccagcagcagcag 147752
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191590 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 7364 gcagcaccaccaccagcagcagcag 7340
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 111468 gcagcaccaccaccagcagcagcag 111444
>gb|AC009372.6| Drosophila melanogaster 3L BAC RP98-48N4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175095 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 123832 aaccaccaccagcagcagcag 123852
>gb|AC009380.6| Drosophila melanogaster 3L BAC RP98-17L5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187973 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 178347 aaccaccaccagcagcagcag 178327
>gb|AC110611.3| Homo sapiens BAC clone RP11-345F18 from 4, complete sequence Length = 195155 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1550 aggttaaccaagtaccaggtt 1570 ||||||||||||||||||||| Sbjct: 156616 aggttaaccaagtaccaggtt 156596
>dbj|AK009204.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310007G05 product:hypothetical protein, full insert sequence Length = 1092 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 482 aaccaccaccagcagcagcag 502
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1276 atggcagataagcttgcatct 1296 ||||||||||||||||||||| Sbjct: 148401 atggcagataagcttgcatct 148421
>ref|XM_803006.1| Trypanosoma cruzi strain CL Brener inositol polyphosphate kinase-like protein (Tc00.1047053506985.60) partial mRNA Length = 2187 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 21 gcagcaccaccaccagcagcagcag 45
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 26188741 accaccaccagcagcagcagt 26188721
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 14814698 aaccaccaccagcagcagcag 14814678
>emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 in linkage group 24, complete sequence Length = 175626 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1083 tcctgttacaaatggtgcaggctct 1107 |||| |||||||||||||||||||| Sbjct: 112002 tccttttacaaatggtgcaggctct 112026
>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179283 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1777 caccaccagcagcagcagtctccac 1801 |||||||||||||||||| |||||| Sbjct: 91850 caccaccagcagcagcagcctccac 91826
>emb|AL136971.7| Human DNA sequence from clone RP3-322A2 on chromosome 6 Contains part of the ANKRD6 gene for ankyrin repeat domain 6 (KIAA0957), complete sequence Length = 82601 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 46184 gcagtaccaccaccagcagcagcag 46160
>emb|AL023913.6|HS1068F16 Human DNA sequence from clone RP5-1068F16 on chromosome 20p12 Contains the 3' end of the SNAP25 gene for 25kDa synaptosomal-associated protein, the RPL23AP6 gene for ribosomal protein L23a pseudogene 6, part of a novel gene and a hypoxia induced gene 1 (HIG1) pseudogene, complete sequence Length = 140306 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1773 gaaccaccaccagcagcagca 1793 ||||||||||||||||||||| Sbjct: 34120 gaaccaccaccagcagcagca 34140
>gb|AC099034.1| Drosophila melanogaster, chromosome 2R, region 58B-58C, BAC clone BACR30O14, complete sequence Length = 186432 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1741 ccgccgcctccacctcctctgccac 1765 ||||||||||||||||| ||||||| Sbjct: 94369 ccgccgcctccacctccgctgccac 94393
>gb|AC026729.5| Homo sapiens chromosome 5 clone CTD-2288A4, complete sequence Length = 113066 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 40326 gcagcaccaccaccagcagcagcag 40350
>emb|BX006665.1|CNS08DB1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA11BA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 930 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 402 accaccaccagcagcagcagt 382
>gb|L28111.1|XELTII5 Xenopus laevis iodothyronine 5-deiodinase type III mRNA, complete cds Length = 1488 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 882 aaccaccaccagcagcagcag 902
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 52224 aaccaccaccagcagcagcag 52244
>gb|BC075632.1| Mus musculus jumonji domain containing 3, mRNA (cDNA clone MGC:91376 IMAGE:30362899), complete cds Length = 5680 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 2239 aaccaccaccagcagcagcag 2259
>emb|BX842641.1| Neurospora crassa DNA linkage group I BAC contig B22I21 Length = 124321 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 19832 accaccaccagcagcagcagt 19812
>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12 Length = 154038 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 116518 gcagcaccaccaccagcagcagcag 116542
>emb|AL596125.27| Mouse DNA sequence from clone RP23-5O23 on chromosome 11 Contains the Chd3 gene for chromodomain helicase DNA binding protein 3, five novel genes, the 3' end of the gene for a novel protein similar to dynein and four CpG islands, complete sequence Length = 165212 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 63126 aaccaccaccagcagcagcag 63106
>gb|BT022298.1| Drosophila melanogaster IP04662 full insert cDNA Length = 1557 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||||| |||||||||||||||||| Sbjct: 279 gcagaagcaccaccagcagcagcag 303
>gb|AY028456.1| Petromyzon marinus estrogen receptor mRNA, partial cds Length = 1662 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 144 gcagcaccaccaccagcagcagcag 168
>gb|AC016687.5| Homo sapiens BAC clone RP11-79E3 from 4, complete sequence Length = 162371 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1321 tcctccattttctcatctctt 1341 ||||||||||||||||||||| Sbjct: 30194 tcctccattttctcatctctt 30214
>gb|AC146055.4| Pan troglodytes BAC clone RP43-80G9 from chromosome 7, complete sequence Length = 184851 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 65743 aaccaccaccagcagcagcag 65723
>dbj|AK196841.1| Mus musculus cDNA, clone:Y1G0123C23, strand:unspecified Length = 170 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 88 aaccaccaccagcagcagcag 68
>gb|AC108057.3| Homo sapiens BAC clone RP11-374N13 from 2, complete sequence Length = 127242 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 gggggagaacatggaaagaaa 504 ||||||||||||||||||||| Sbjct: 84093 gggggagaacatggaaagaaa 84073
>gb|AC138710.5| Homo sapiens chromosome 17, clone RP11-822E23, complete sequence Length = 147089 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1321 tcctccattttctcatctctt 1341 ||||||||||||||||||||| Sbjct: 19353 tcctccattttctcatctctt 19373
>gb|AC016041.5|AC016041 Genomic sequence for Arabidopsis thaliana BAC F27J15 from chromosome I, complete sequence Length = 119091 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 858 tcaagcatcatcattggtttc 878 ||||||||||||||||||||| Sbjct: 32187 tcaagcatcatcattggtttc 32167
>gb|BT003529.1| Drosophila melanogaster RE18590 full insert cDNA Length = 4392 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1741 ccgccgcctccacctcctctgccac 1765 ||||||||||||||||| ||||||| Sbjct: 514 ccgccgcctccacctccgctgccac 490
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 53281 accaccaccagcagcagcagt 53261
>gb|AC008710.5| Homo sapiens chromosome 5 clone CTB-7E3, complete sequence Length = 132521 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 110942 gcagcaccaccaccagcagcagcag 110966
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G03 Length = 106401 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 32697 aaccaccaccagcagcagcag 32717
>dbj|AB160620.1| Mus musculus mRNA for immunoglobulin H-chain V-region, partial cds, clone: 9B_1-27 Length = 354 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1189 cctcagtttcagccagtgcatcaag 1213 |||| |||||||||||||||||||| Sbjct: 120 cctctgtttcagccagtgcatcaag 96
>dbj|AB160617.1| Mus musculus mRNA for immunoglobulin H-chain V-region, partial cds, clone: 9B_1-24 Length = 354 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1189 cctcagtttcagccagtgcatcaag 1213 |||| |||||||||||||||||||| Sbjct: 120 cctctgtttcagccagtgcatcaag 96
>dbj|AB160613.1| Mus musculus mRNA for immunoglobulin H-chain V-region, partial cds, clone: 9B_1-20 Length = 354 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1189 cctcagtttcagccagtgcatcaag 1213 |||| |||||||||||||||||||| Sbjct: 120 cctctgtttcagccagtgcatcaag 96
>dbj|AB160607.1| Mus musculus mRNA for immunoglobulin H-chain V-region, partial cds, clone: 9B_1-14 Length = 354 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1189 cctcagtttcagccagtgcatcaag 1213 |||| |||||||||||||||||||| Sbjct: 120 cctctgtttcagccagtgcatcaag 96
>ref|XM_343526.2| PREDICTED: Rattus norvegicus forkhead box P4 (predicted) (Foxp4_predicted), mRNA Length = 4036 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 2770 aaccaccaccagcagcagcag 2790
>ref|XM_960649.1| Neurospora crassa OR74A hypothetical protein (NCU00602.1) partial mRNA Length = 1869 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 946 accaccaccagcagcagcagt 966
>ref|XM_953330.1| Neurospora crassa OR74A hypothetical protein (NCU07422.1) partial mRNA Length = 1275 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 763 accaccaccagcagcagcagt 783
>ref|XM_952316.1| Neurospora crassa OR74A hypothetical protein (NCU07184.1) partial mRNA Length = 591 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 402 gcagcaccaccaccagcagcagcag 426
>emb|BX470131.7| Zebrafish DNA sequence from clone CH211-175M2 in linkage group 10, complete sequence Length = 143803 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 104840 aaccaccaccagcagcagcag 104860
>gb|AC116622.6| Homo sapiens BAC clone RP11-312L16 from 4, complete sequence Length = 148850 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1321 tcctccattttctcatctctt 1341 ||||||||||||||||||||| Sbjct: 27572 tcctccattttctcatctctt 27552
>gb|AF247362.1|AF247362 Petromyzon marinus Spi transcription factor mRNA, complete cds Length = 1272 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 739 gcagcaccaccaccagcagcagcag 763
>dbj|AK072124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124F19, full insert sequence Length = 2325 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 213 aaccaccaccagcagcagcag 233
>dbj|AK070468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052D05, full insert sequence Length = 2146 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1276 atggcagataagcttgcatct 1296 ||||||||||||||||||||| Sbjct: 1869 atggcagataagcttgcatct 1849
>dbj|AK061519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A03, full insert sequence Length = 1326 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1276 atggcagataagcttgcatct 1296 ||||||||||||||||||||| Sbjct: 1011 atggcagataagcttgcatct 991
>emb|AL844532.18| Mouse DNA sequence from clone RP23-221O14 on chromosome 2, complete sequence Length = 207432 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 79199 aaccaccaccagcagcagcag 79219
>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete sequence Length = 175199 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 109371 gcagcaccaccaccagcagcagcag 109395
>emb|AL845427.11| Mouse DNA sequence from clone RP23-436J19 on chromosome 2, complete sequence Length = 168207 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 67500 aaccaccaccagcagcagcag 67480
>gb|AY135029.1| Mus musculus winged-helix repressor FOXP4 mRNA, complete cds Length = 3184 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 2557 aaccaccaccagcagcagcag 2577
>dbj|AB052766.1| Mus musculus mFKHLA mRNA for fork head-related protein like A, complete cds Length = 3200 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 2564 aaccaccaccagcagcagcag 2584
>dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1171G1 Length = 187189 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 147340 aaccaccaccagcagcagcag 147360
>gb|AC110519.13| Mus musculus chromosome 8, clone RP23-183M15, complete sequence Length = 217236 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 15031 accaccaccagcagcagcagt 15011
>gb|U70654.1|MMU70654 Mus musculus musculus sex determining protein (Sry) gene, complete cds Length = 1598 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 700 accaccaccagcagcagcagt 720
>gb|U70653.1|MMU70653 Mus musculus musculus sex determining protein (Sry) gene, complete cds Length = 1586 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 700 accaccaccagcagcagcagt 720
>gb|U70652.1|MMU70652 Mus musculus musculus sex determining protein (Sry) gene, complete cds Length = 1612 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 708 accaccaccagcagcagcagt 728
>gb|U70651.1|MMU70651 Mus musculus musculus sex determining protein (Sry) gene, complete cds Length = 1611 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 713 accaccaccagcagcagcagt 733
>gb|AC004368.1|AC004368 Drosophila melanogaster DNA sequence (P1 DS05295 (D64)), complete sequence Length = 89885 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1741 ccgccgcctccacctcctctgccac 1765 ||||||||||||||||| ||||||| Sbjct: 36938 ccgccgcctccacctccgctgccac 36914
>gb|AF033797.1|TMIGFI1 Tilapia mossambica insulin-like growth factor I (IGF-I) gene, exon 1 Length = 2001 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 980 accaccaccagcagcagcagt 960
>emb|AL928875.4| Zebrafish DNA sequence from clone CH211-114C12, complete sequence Length = 158038 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 tgacatcctgcaaaatagcaa 410 ||||||||||||||||||||| Sbjct: 145984 tgacatcctgcaaaatagcaa 145964
>emb|AL683818.12| Mouse DNA sequence from clone RP23-229B23 on chromosome 4, complete sequence Length = 210718 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 77897 accaccaccagcagcagcagt 77877
>gb|DQ060244.1| Lampetra fluviatilis Nkx2.1 mRNA, partial cds Length = 375 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 97 aaccaccaccagcagcagcag 117
>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete sequence Length = 211657 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 206862 gcagcaccaccaccagcagcagcag 206886
>gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, complete sequence Length = 192484 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1770 gcagaaccaccaccagcagcagcag 1794 |||| |||||||||||||||||||| Sbjct: 89953 gcagcaccaccaccagcagcagcag 89977
>dbj|AB052339.1| Lampetra japonica LjTTF-1 mRNA for thyroid transcription factor-1, complete cds Length = 2110 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 987 aaccaccaccagcagcagcag 1007
>gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, complete sequence Length = 217058 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1112 ctagtccatccatggttacat 1132 ||||||||||||||||||||| Sbjct: 126747 ctagtccatccatggttacat 126727
>dbj|AP004292.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1590E11 Length = 158466 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 23939 aaccaccaccagcagcagcag 23959
>gb|M98397.1|DROSTEREC Drosophila melanogaster steroid receptor beta FTZ-F1 mRNA, complete cds Length = 2561 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1774 aaccaccaccagcagcagcag 1794 ||||||||||||||||||||| Sbjct: 371 aaccaccaccagcagcagcag 391
>dbj|AB002344.2| Human mRNA for KIAA0346 gene, partial cds Length = 6698 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1775 accaccaccagcagcagcagt 1795 ||||||||||||||||||||| Sbjct: 1567 accaccaccagcagcagcagt 1587 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 422,246,846 Number of extensions: 22817120 Number of successful extensions: 148743 Number of sequences better than 10.0: 194 Number of HSP's gapped: 148721 Number of HSP's successfully gapped: 302 Length of query: 2302 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2279 Effective length of database: 18,503,978,556 Effective search space: 42170567129124 Effective search space used: 42170567129124 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
