ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf10j24 |
|---|---|
| Clone Library Name | barley_pub |
>Q5R419:SERC1_PONPY Serine incorporator 1 - Pongo pygmaeus (Orangutan)| Length = 453 Score = 31.6 bits (70), Expect = 2.2 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = +2 Query: 254 CMGCRCCPAGNNSS 295 C+ CRCCP+GNNS+ Sbjct: 23 CLLCRCCPSGNNST 36
>Q9QZI8:SERC1_MOUSE Serine incorporator 1 - Mus musculus (Mouse)| Length = 453 Score = 31.6 bits (70), Expect = 2.2 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = +2 Query: 254 CMGCRCCPAGNNSS 295 C+ CRCCP+GNNS+ Sbjct: 23 CLLCRCCPSGNNST 36
>Q9NRX5:SERC1_HUMAN Serine incorporator 1 - Homo sapiens (Human)| Length = 453 Score = 31.6 bits (70), Expect = 2.2 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = +2 Query: 254 CMGCRCCPAGNNSS 295 C+ CRCCP+GNNS+ Sbjct: 23 CLLCRCCPSGNNST 36
>Q3MHV9:SERC1_BOVIN Serine incorporator 1 - Bos taurus (Bovine)| Length = 453 Score = 31.6 bits (70), Expect = 2.2 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = +2 Query: 254 CMGCRCCPAGNNSS 295 C+ CRCCP+GNNS+ Sbjct: 23 CLLCRCCPSGNNST 36
>Q6L8H4:KRA51_HUMAN Keratin-associated protein 5-1 - Homo sapiens (Human)| Length = 278 Score = 31.6 bits (70), Expect = 2.2 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +2 Query: 254 CMGCRCCPAGNNSSSCVDTQCCYGINCNIPGKPFGTC 364 C GC G+ SS CV CC + C +P +C Sbjct: 28 CGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSC 64
>Q9R172:NOTC3_RAT Neurogenic locus notch homolog protein 3 precursor - Rattus| norvegicus (Rat) Length = 2319 Score = 30.8 bits (68), Expect = 3.7 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = +2 Query: 254 CMGCRCCPAGNNSSSCVDTQCCYGINC-NIPGKPFGTCAFTP 376 C R P+G ++SC T C +G +C + PF C P Sbjct: 1326 CRVSRASPSGATNTSCAATPCLHGGSCLPVQSVPFFRCVCAP 1367
>P0C176:SCKP3_TITSE Peptide TsPep3 - Tityus serrulatus (Brazilian scorpion)| Length = 29 Score = 30.4 bits (67), Expect = 4.9 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%) Frame = +2 Query: 254 CMGC--RCCPAGNNSSSCVDTQC-CY 322 C GC +CCP G S C++ +C CY Sbjct: 4 CGGCNRKCCPGGCRSGKCINGKCQCY 29
>P26372:KRUC_SHEEP Keratin, ultra high-sulfur matrix protein - Ovis aries (Sheep)| Length = 182 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +2 Query: 254 CMGCRCCPAGNNSSSCVDTQCCYGINCNIPGKPFGTC 364 C GC G +SS CV CC + C +P +C Sbjct: 14 CGGCGSRCGGCSSSCCVPVCCCKPVCCCVPACSCSSC 50
>Q76N89:HECW1_HUMAN E3 ubiquitin-protein ligase HECW1 - Homo sapiens (Human)| Length = 1606 Score = 30.0 bits (66), Expect = 6.4 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 6/36 (16%) Frame = +2 Query: 254 CMGC--RCCPAGNNSSSCVDTQC----CYGINCNIP 343 C GC CC SSSC T C CY +C P Sbjct: 670 CEGCDASCCSPSCYSSSCYSTSCYSSSCYSASCYSP 705
>P0C175:SCKP2_TITSE Peptide TsPep2 precursor - Tityus serrulatus (Brazilian scorpion)| Length = 68 Score = 29.6 bits (65), Expect = 8.3 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Frame = +2 Query: 254 CMGC--RCCPAGNNSSSCVDTQC-CYG 325 C GC +CC G S C++ +C CYG Sbjct: 30 CGGCNRKCCAGGCRSGKCINGKCQCYG 56
>Q61982:NOTC3_MOUSE Neurogenic locus notch homolog protein 3 precursor - Mus musculus| (Mouse) Length = 2318 Score = 29.6 bits (65), Expect = 8.3 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = +2 Query: 254 CMGCRCCPAGNNSSSCVDTQCCYGINC-NIPGKPFGTCAFTP 376 C R P+G ++SC C +G +C + PF C P Sbjct: 1325 CRVSRASPSGATNASCASAPCLHGGSCLPVQSVPFFRCVCAP 1366
>Q6L8G8:KRA57_HUMAN Keratin-associated protein 5-7 - Homo sapiens (Human)| Length = 165 Score = 29.6 bits (65), Expect = 8.3 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +2 Query: 254 CMGCRCCPAGNNSSSCVDTQCCYGINCNIPGKPFGTC 364 C GC G SS CV CC + C +P +C Sbjct: 21 CGGCGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSC 57
>Q9R0M0:CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 precursor - Mus| musculus (Mouse) Length = 2920 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Frame = +2 Query: 218 SAASEAFEPFQLCMGCRC-CPAGNNSSSC-VDTQCCYGINCNIPGKPFGTC 364 +++S F P L G RC CP G C + CY C P G C Sbjct: 1258 ASSSVLFRPIHLVGGLRCRCPPGLTGDYCETEVDLCYSRTCG----PHGRC 1304 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 67,417,951 Number of extensions: 1148112 Number of successful extensions: 3125 Number of sequences better than 10.0: 13 Number of HSP's gapped: 3093 Number of HSP's successfully gapped: 13 Length of query: 195 Length of database: 100,686,439 Length adjustment: 107 Effective length of query: 88 Effective length of database: 71,336,874 Effective search space: 6277644912 Effective search space used: 6277644912 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
