ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf7m06 |
|---|---|
| Clone Library Name | barley_pub |
>P39843:BMR2_BACSU Multidrug resistance protein 2 - Bacillus subtilis| Length = 400 Score = 64.7 bits (156), Expect = 1e-09 Identities = 69/320 (21%), Positives = 136/320 (42%) Frame = +2 Query: 326 MPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFG 505 MP AY ++ + + + VS G ++GP GG++A Sbjct: 116 MPAVTAYVADITTLKERSKAMGYVSAAISTGFIIGPGAGGFIA----------------- 158 Query: 506 RFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKK 685 F +P F S IA ++ +++ L ++E ++S ++ ++ +++ K+ Sbjct: 159 GFGIRMPFFFASAIALIAAVTSVFI---LKESLSIEERHQLSSHTKESNFIKDL----KR 211 Query: 686 SLYKNWPLMSSIIAYCVFTLHDTAYSEIFSLWAVSDKKYGGLSFSSKDVGQVLAASGAGL 865 S++ + + I+ F L +AY +FSL+ SD K+G F+ KD+ ++ S Sbjct: 212 SIHPVYFIAFIIVFVMAFGL--SAYETVFSLF--SDHKFG---FTPKDIAAIITISSIVA 264 Query: 866 LLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMTHLSGTTLELAIYSAAVMKGTF 1045 ++ Q+L++ + LG ++ + A F++ + L + + + + Sbjct: 265 VVIQVLLFGKLVNKLGEKRMIQLCLITG----AILAFVSTVMSGFLTVLLVTCFIF---L 317 Query: 1046 ATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLFSWAQKRQHAAFFP 1225 A +L S ++ NQ+G G+++T SL PA G+LF +P Sbjct: 318 AFDLLRPALTAHLSNMAGNQQGFVAGMNSTYTSLGNIFGPALGGILFDL------NIHYP 371 Query: 1226 GDQMIFLILNIVEVIGLVLT 1285 FL V ++GL LT Sbjct: 372 -----FLFAGFVMIVGLGLT 386
>P33449:BMR1_BACSU Multidrug resistance protein 1 - Bacillus subtilis| Length = 389 Score = 50.8 bits (120), Expect = 2e-05 Identities = 57/288 (19%), Positives = 116/288 (40%), Gaps = 1/288 (0%) Frame = +2 Query: 326 MPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFG 505 MP A+ ++ + L +S G ++GP IGG+LA+ + Sbjct: 112 MPGVTAFIADITTIKTRPKALGYMSAAISTGFIIGPGIGGFLAE-------------VHS 158 Query: 506 RFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKK 685 R P+ F L A ++S + L E +N E + + +G R+ P Sbjct: 159 RLPFFFAAAFALL---AAILSILTLREPERNPENQEIKGQKTGFKRIFAP---------- 205 Query: 686 SLYKNWPLMSSIIAYCVFTLHDTAYSEIFSLWAV-SDKKYGGLSFSSKDVGQVLAASGAG 862 +Y IA+ + + + SL+A+ D K+G F++ D+ ++ Sbjct: 206 -MY--------FIAFLIILISSFGLASFESLFALFVDHKFG---FTASDIAIMITGGAIV 253 Query: 863 LLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMTHLSGTTLELAIYSAAVMKGT 1042 + Q++++ ++ G I R + +LS L+ F+ + + + + + V G Sbjct: 254 GAITQVVLFDRFTRWFGEIHLIRYSLILSTSLV----FLLTTVHSYVAILLVTVTVFVG- 308 Query: 1043 FATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLF 1186 ++ S ++ N++G A G+++ S+ P G+LF Sbjct: 309 --FDLMRPAVTTYLSKIAGNEQGFAGGMNSMFTSIGNVFGPIIGGMLF 354
>P25351:YCR3_YEAST Uncharacterized membrane protein YCR023C - Saccharomyces cerevisiae| (Baker's yeast) Length = 611 Score = 47.0 bits (110), Expect = 2e-04 Identities = 18/53 (33%), Positives = 32/53 (60%) Frame = +1 Query: 172 KENSTGTPYKEFFYVGVTTFASALPISSLFPFLYFMIQDMHVAKNEQDIGVYA 330 KE G P+ + V + F+ + SSLFP++YFM++D ++A N+ + Y+ Sbjct: 9 KEQMDGFPWVQLVVVSLVRFSEPIAFSSLFPYVYFMVRDFNIAPNDAQVSKYS 61 Score = 34.7 bits (78), Expect = 1.1 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Frame = +2 Query: 368 EHHALGLSVVSTGWGIGLVVGPAIGGYLA---QPAKQYPGLFSE--KSLFGRFPYLLPCL 532 +H AL S + + G VVGP IGG+L + P F K + +PY LP + Sbjct: 144 KHQALAFSTMPLLFQFGAVVGPMIGGFLVFRDGTMNEVPLWFPHFAKRIIRSYPYALPNV 203 Query: 533 FISL-IAFAVLISCIWLPET 589 + + + F + + ++L ET Sbjct: 204 VVCMFLMFGLTNATLFLEET 223
>Q6GBD5:NORA_STAAS Quinolone resistance protein norA - Staphylococcus aureus (strain| MSSA476) Length = 388 Score = 42.7 bits (99), Expect = 0.004 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 3/290 (1%) Frame = +2 Query: 326 MPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFG 505 MP ++ A +S G ++GP IGG++A+ + + P F+ Sbjct: 109 MPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFYFAGA---- 164 Query: 506 RFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKK 685 + ++AF + I I P ++ SG ++ E + Sbjct: 165 ----------LGILAFIMSIVLIHDP----------KKSTTSGFQKL----------EPQ 194 Query: 686 SLYK-NWPL-MSSIIAYCVFTLHDTAYSEIFSLWAVSDKKYGGLSFSSKDVGQVLAASGA 859 L K NW + ++ +I V +L +A+ ++SL+ +DK +++S KD+ + G Sbjct: 195 LLTKINWKVFITPVILTLVLSLGLSAFETLYSLYT-ADK----VNYSPKDISIAITGGGI 249 Query: 860 GLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMT-HLSGTTLELAIYSAAVMK 1036 L+QI + KY + + + S+ +L F + S + ++ M Sbjct: 250 FGALFQIYFFDKFMKYFSELTFIAWSLLYSVVVLILLVFANGYWSIMLISFVVFIGFDMI 309 Query: 1037 GTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLF 1186 T S ++ ++G A G+++T S+ I P AG LF Sbjct: 310 RPAITNYF--------SNIAGERQGFAGGLNSTFTSMGNFIGPLIAGALF 351
>P51563:TCR7_VIBAN Tetracycline resistance protein, class G - Vibrio anguillarum| (Listonella anguillarum) Length = 393 Score = 42.4 bits (98), Expect = 0.005 Identities = 60/263 (22%), Positives = 98/263 (37%), Gaps = 2/263 (0%) Frame = +2 Query: 407 WGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFGRFPYLLPCLFISLIAFAVLISCIWLPE 586 +G G++ GPA+GG L + P++ L L FA L++CI+L E Sbjct: 138 YGAGMIAGPALGGMLG-------------GISAHAPFIAAAL---LNGFAFLLACIFLKE 181 Query: 587 TLHMHKNLEREVEMSGDSRVTDPHREVRHPEKKSLYKNWPLMSSIIAYCVFTLHDTAYSE 766 T H H + V + P +R + L + VF + Sbjct: 182 THHSHGGTGKPVRIK-------PFVLLRLDD--------ALRGLGALFAVFFIIQLIGQV 226 Query: 767 IFSLWAVSDKKYG--GLSFSSKDVGQVLAASGAGLLLYQILVYRYVHKYLGSIISSRIAA 940 +LW + YG +++ VG LAA GA ++Q V + LG Sbjct: 227 PAALWVI----YGEDRFQWNTATVGLSLAAFGATHAIFQAFVTGPLSSRLGE------RR 276 Query: 941 VLSIPLLATYPFMTHLSGTTLELAIYSAAVMKGTFATTILTGTCILQNSAVSQNQRGAAN 1120 L + A L+ T ++ ++ + +L N+ VS N++GA Sbjct: 277 TLLFGMAADGTGFVLLAFATQGWMVFPILLLLAAGGVGMPALQAMLSNN-VSSNKQGALQ 335 Query: 1121 GISTTAMSLFKAIAPAGAGVLFS 1189 G T+ +L P G L+S Sbjct: 336 GTLTSLTNLSSIAGPLGFTALYS 358
>P0A0J6:NORA_STAAW Quinolone resistance protein norA - Staphylococcus aureus (strain| MW2) Length = 388 Score = 41.2 bits (95), Expect = 0.012 Identities = 59/290 (20%), Positives = 114/290 (39%), Gaps = 3/290 (1%) Frame = +2 Query: 326 MPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFG 505 MP ++ A +S G ++GP IGG++A+ + + P F+ Sbjct: 109 MPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFYFAGA---- 164 Query: 506 RFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKK 685 + ++AF + I I P ++ SG ++ E + Sbjct: 165 ----------LGILAFIMSIVLIHDP----------KKSTTSGFQKL----------EPQ 194 Query: 686 SLYK-NWPL-MSSIIAYCVFTLHDTAYSEIFSLWAVSDKKYGGLSFSSKDVGQVLAASGA 859 L K NW + ++ +I V + +A+ ++SL+ +DK +++S KD+ + G Sbjct: 195 LLTKINWKVFITPVILTLVLSFGLSAFETLYSLYT-ADK----VNYSPKDISIAITGGGI 249 Query: 860 GLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMT-HLSGTTLELAIYSAAVMK 1036 L+QI + KY + + + S+ +L F + S + ++ M Sbjct: 250 FGALFQIYFFDKFMKYFSELTFIAWSLLYSVVVLILLVFANGYWSIMLISFVVFIGFDMI 309 Query: 1037 GTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLF 1186 T S ++ ++G A G+++T S+ I P AG LF Sbjct: 310 RPAITNYF--------SNIAGERQGFAGGLNSTFTSMGNFIGPLIAGALF 351
>P0A0J7:NORA_STAAU Quinolone resistance protein norA - Staphylococcus aureus| Length = 388 Score = 41.2 bits (95), Expect = 0.012 Identities = 59/290 (20%), Positives = 114/290 (39%), Gaps = 3/290 (1%) Frame = +2 Query: 326 MPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFG 505 MP ++ A +S G ++GP IGG++A+ + + P F+ Sbjct: 109 MPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFYFAGA---- 164 Query: 506 RFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKK 685 + ++AF + I I P ++ SG ++ E + Sbjct: 165 ----------LGILAFIMSIVLIHDP----------KKSTTSGFQKL----------EPQ 194 Query: 686 SLYK-NWPL-MSSIIAYCVFTLHDTAYSEIFSLWAVSDKKYGGLSFSSKDVGQVLAASGA 859 L K NW + ++ +I V + +A+ ++SL+ +DK +++S KD+ + G Sbjct: 195 LLTKINWKVFITPVILTLVLSFGLSAFETLYSLYT-ADK----VNYSPKDISIAITGGGI 249 Query: 860 GLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMT-HLSGTTLELAIYSAAVMK 1036 L+QI + KY + + + S+ +L F + S + ++ M Sbjct: 250 FGALFQIYFFDKFMKYFSELTFIAWSLLYSVVVLILLVFANGYWSIMLISFVVFIGFDMI 309 Query: 1037 GTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLF 1186 T S ++ ++G A G+++T S+ I P AG LF Sbjct: 310 RPAITNYF--------SNIAGERQGFAGGLNSTFTSMGNFIGPLIAGALF 351
>P0A0J5:NORA_STAAN Quinolone resistance protein norA - Staphylococcus aureus (strain| N315) Length = 388 Score = 41.2 bits (95), Expect = 0.012 Identities = 59/290 (20%), Positives = 114/290 (39%), Gaps = 3/290 (1%) Frame = +2 Query: 326 MPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFG 505 MP ++ A +S G ++GP IGG++A+ + + P F+ Sbjct: 109 MPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFYFAGA---- 164 Query: 506 RFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKK 685 + ++AF + I I P ++ SG ++ E + Sbjct: 165 ----------LGILAFIMSIVLIHDP----------KKSTTSGFQKL----------EPQ 194 Query: 686 SLYK-NWPL-MSSIIAYCVFTLHDTAYSEIFSLWAVSDKKYGGLSFSSKDVGQVLAASGA 859 L K NW + ++ +I V + +A+ ++SL+ +DK +++S KD+ + G Sbjct: 195 LLTKINWKVFITPVILTLVLSFGLSAFETLYSLYT-ADK----VNYSPKDISIAITGGGI 249 Query: 860 GLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMT-HLSGTTLELAIYSAAVMK 1036 L+QI + KY + + + S+ +L F + S + ++ M Sbjct: 250 FGALFQIYFFDKFMKYFSELTFIAWSLLYSVVVLILLVFANGYWSIMLISFVVFIGFDMI 309 Query: 1037 GTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLF 1186 T S ++ ++G A G+++T S+ I P AG LF Sbjct: 310 RPAITNYF--------SNIAGERQGFAGGLNSTFTSMGNFIGPLIAGALF 351
>P0A0J4:NORA_STAAM Quinolone resistance protein norA - Staphylococcus aureus (strain| Mu50 / ATCC 700699) Length = 388 Score = 41.2 bits (95), Expect = 0.012 Identities = 59/290 (20%), Positives = 114/290 (39%), Gaps = 3/290 (1%) Frame = +2 Query: 326 MPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFG 505 MP ++ A +S G ++GP IGG++A+ + + P F+ Sbjct: 109 MPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFYFAGA---- 164 Query: 506 RFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKK 685 + ++AF + I I P ++ SG ++ E + Sbjct: 165 ----------LGILAFIMSIVLIHDP----------KKSTTSGFQKL----------EPQ 194 Query: 686 SLYK-NWPL-MSSIIAYCVFTLHDTAYSEIFSLWAVSDKKYGGLSFSSKDVGQVLAASGA 859 L K NW + ++ +I V + +A+ ++SL+ +DK +++S KD+ + G Sbjct: 195 LLTKINWKVFITPVILTLVLSFGLSAFETLYSLYT-ADK----VNYSPKDISIAITGGGI 249 Query: 860 GLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMT-HLSGTTLELAIYSAAVMK 1036 L+QI + KY + + + S+ +L F + S + ++ M Sbjct: 250 FGALFQIYFFDKFMKYFSELTFIAWSLLYSVVVLILLVFANGYWSIMLISFVVFIGFDMI 309 Query: 1037 GTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLF 1186 T S ++ ++G A G+++T S+ I P AG LF Sbjct: 310 RPAITNYF--------SNIAGERQGFAGGLNSTFTSMGNFIGPLIAGALF 351
>Q5HHX4:NORA_STAAC Quinolone resistance protein norA - Staphylococcus aureus (strain| COL) Length = 388 Score = 41.2 bits (95), Expect = 0.012 Identities = 59/290 (20%), Positives = 114/290 (39%), Gaps = 3/290 (1%) Frame = +2 Query: 326 MPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFG 505 MP ++ A +S G ++GP IGG++A+ + + P F+ Sbjct: 109 MPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFYFAGA---- 164 Query: 506 RFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKK 685 + ++AF + I I P ++ SG ++ E + Sbjct: 165 ----------LGILAFIMSIVLIHDP----------KKSTTSGFQKL----------EPQ 194 Query: 686 SLYK-NWPL-MSSIIAYCVFTLHDTAYSEIFSLWAVSDKKYGGLSFSSKDVGQVLAASGA 859 L K NW + ++ +I V + +A+ ++SL+ +DK +++S KD+ + G Sbjct: 195 LLTKINWKVFITPVILTLVLSFGLSAFETLYSLYT-ADK----VNYSPKDISIAITGGGI 249 Query: 860 GLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMT-HLSGTTLELAIYSAAVMK 1036 L+QI + KY + + + S+ +L F + S + ++ M Sbjct: 250 FGALFQIYFFDKFMKYFSELTFIAWSLLYSVVVLILLVFANDYWSIMLISFVVFIGFDMI 309 Query: 1037 GTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLF 1186 T S ++ ++G A G+++T S+ I P AG LF Sbjct: 310 RPAITNYF--------SNIAGERQGFAGGLNSTFTSMGNFIGPLIAGALF 351
>Q6GIU7:NORA_STAAR Quinolone resistance protein norA - Staphylococcus aureus (strain| MRSA252) Length = 388 Score = 37.7 bits (86), Expect = 0.13 Identities = 58/289 (20%), Positives = 111/289 (38%), Gaps = 2/289 (0%) Frame = +2 Query: 326 MPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFG 505 MP +V A +S G ++GP IGG++A+ + + P F+ Sbjct: 109 MPGVTGLIADVSPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFYFAGA---- 164 Query: 506 RFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKK 685 + ++AF + + I P ++ SG ++ E + Sbjct: 165 ----------LGILAFIMSVVLIHDP----------KKSTTSGFQKL----------EPQ 194 Query: 686 SLYK-NWPL-MSSIIAYCVFTLHDTAYSEIFSLWAVSDKKYGGLSFSSKDVGQVLAASGA 859 L K NW + ++ I V +A+ ++SL+ Y S KD+ + G Sbjct: 195 LLTKINWKVFITPAILTLVLAFGLSAFETLYSLYTSYKVNY-----SPKDISIAITGGGI 249 Query: 860 GLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMTHLSGTTLELAIYSAAVMKG 1039 L+QI + KY + + + S+ +L + ++ + + S AV G Sbjct: 250 FGALFQIYFFDKFMKYFSELTFIAWSLIYSVIVLV----LLVIADGYWTIMVISFAVFIG 305 Query: 1040 TFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLF 1186 ++ S ++ +++G A G+++T S+ I P AG LF Sbjct: 306 ---FDMIRPAITNYFSNIAGDRQGFAGGLNSTFTSMGNFIGPLIAGALF 351
>P70187:HIAT1_MOUSE Hippocampus abundant transcript 1 protein - Mus musculus (Mouse)| Length = 490 Score = 36.2 bits (82), Expect = 0.39 Identities = 58/293 (19%), Positives = 114/293 (38%), Gaps = 4/293 (1%) Frame = +2 Query: 320 VCMPVFLAYSVEVCRPEHHALGLSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSL 499 V V AY ++ + ++ +VS + LV PAIG YL Q + Sbjct: 138 VTFSVVFAYVADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGQ-------------M 184 Query: 500 FGRFPYLLPCLFISLIAFAVLISCIWLPETLHMHKNLEREVEMSGDSRVT----DPHREV 667 +G ++ I+L+ ++ + +PE+L E+ S + ++ DP + Sbjct: 185 YGDSLVVVLATAIALLDICFIL--VAVPESLP-----EKMRPASWGAPISWEQADPFASL 237 Query: 668 RHPEKKSLYKNWPLMSSIIAYCVFTLHDTAYSEIFSLWAVSDKKYGGLSFSSKDVGQVLA 847 + + S+ L+ I + + YS F L+ K FS + V +A Sbjct: 238 KKVGQDSIV----LLICITVFLSYLPEAGQYSSFF-LYLKQIMK-----FSPESVAAFIA 287 Query: 848 ASGAGLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMTHLSGTTLELAIYSAA 1027 G ++ Q +V + + +G+ + + I LA Y F + +++A Sbjct: 288 VLGILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQLAWYGFGSE------PWMMWAAG 341 Query: 1028 VMKGTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLF 1186 + + T + ++ +A +Q+G G+ T L + PA G +F Sbjct: 342 AVAAMSSITFPAVSALVSRTA-DADQQGVVQGMITGIRGLCNGLGPALYGFIF 393
>Q07282:TCR5_ECOLI Tetracycline resistance protein, class E - Escherichia coli| Length = 405 Score = 35.8 bits (81), Expect = 0.51 Identities = 54/261 (20%), Positives = 100/261 (38%) Frame = +2 Query: 407 WGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFGRFPYLLPCLFISLIAFAVLISCIWLPE 586 +G G++ GP IGG+ Q + Q P +F+ ++ A L+S L E Sbjct: 138 FGGGMIAGPVIGGFAGQLSVQAPFMFA----------------AAINGLAFLVSLFILHE 181 Query: 587 TLHMHKNLEREVEMSGDSRVTDPHREVRHPEKKSLYKNWPLMSSIIAYCVFTLHDTAYSE 766 T H + E++ + T RE+ PL ++ + + L + Sbjct: 182 T-HNANQVSDELKNETINETTSSIREMIS----------PLSGLLVVFFIIQLIGQIPAT 230 Query: 767 IFSLWAVSDKKYGGLSFSSKDVGQVLAASGAGLLLYQILVYRYVHKYLGSIISSRIAAVL 946 ++ L+ + G+ VG LA G L+Q L ++ K+LG + Sbjct: 231 LWVLFGEERFAWDGVM-----VGVSLAVFGLTHALFQGLAAGFIAKHLGE------RKAI 279 Query: 947 SIPLLATYPFMTHLSGTTLELAIYSAAVMKGTFATTILTGTCILQNSAVSQNQRGAANGI 1126 ++ +LA + L+ T ++ ++ T+ I+ + V Q +G G+ Sbjct: 280 AVGILADGCGLFLLAVITQSWMVWPVLLLLACGGITLPALQGII-SVRVGQVAQGQLQGV 338 Query: 1127 STTAMSLFKAIAPAGAGVLFS 1189 T+ L I P L+S Sbjct: 339 LTSLTHLTAVIGPLVFAFLYS 359
>O51451:SECY_BORBU Preprotein translocase subunit secY - Borrelia burgdorferi (Lyme| disease spirochete) Length = 434 Score = 35.4 bits (80), Expect = 0.67 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 2/91 (2%) Frame = +2 Query: 1052 TILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLFSWAQKRQHAAFFPGD 1231 T+ TGT IL NQRG NG T++ +F I LF+ Q Q + Sbjct: 155 TVTTGTFILLWFGEQINQRGVGNG---TSLIIFSGIVVRLQAALFNLFQSMQDPSQNVNP 211 Query: 1232 QMIFLILN--IVEVIGLVLTFKPFLAVPKHY 1318 + LI++ I+ VI ++ +K + + HY Sbjct: 212 VFVILIISIFILVVILIIYEYKAQMRIAIHY 242
>O33279:SPEE_MYCTU Probable spermidine synthase - Mycobacterium tuberculosis| Length = 523 Score = 35.0 bits (79), Expect = 0.87 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%) Frame = +2 Query: 803 GGLSFSSKDVGQVLAASGAGLLLYQILVYRYVHKYLG-SIISSRIAAVLSIPLLATYPFM 979 GG+ +S V +AA GAG LL + L+ ++ + I + + L A + F+ Sbjct: 49 GGIVATSLIVAGYIAALGAGALLIKPLLAHAAIAFIAVEAVLGIIGGLSAAALYAAFAFL 108 Query: 980 THLSGTTLELAIYSAAVMKGTFATTILTGTCILQNSAVSQNQRGAANGISTTA 1138 L G+TL LA+ A++ G + +LQ V+ GAA+ T A Sbjct: 109 DELDGSTLVLAV-GTALIGGLVGAEVPLLMTLLQRGRVA----GAADAGRTLA 156
>Q7TY95:SPEE_MYCBO Probable spermidine synthase - Mycobacterium bovis| Length = 523 Score = 35.0 bits (79), Expect = 0.87 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%) Frame = +2 Query: 803 GGLSFSSKDVGQVLAASGAGLLLYQILVYRYVHKYLG-SIISSRIAAVLSIPLLATYPFM 979 GG+ +S V +AA GAG LL + L+ ++ + I + + L A + F+ Sbjct: 49 GGIVATSLIVAGYIAALGAGALLIKPLLAHAAIAFIAVEAVLGIIGGLSAAALYAAFAFL 108 Query: 980 THLSGTTLELAIYSAAVMKGTFATTILTGTCILQNSAVSQNQRGAANGISTTA 1138 L G+TL LA+ A++ G + +LQ V+ GAA+ T A Sbjct: 109 DELDGSTLVLAV-GTALIGGLVGAEVPLLMTLLQRGRVA----GAADAGRTLA 156
>Q8NH76:O56B4_HUMAN Olfactory receptor 56B4 - Homo sapiens (Human)| Length = 319 Score = 34.3 bits (77), Expect = 1.5 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = +3 Query: 228 FCLRSADIITVPLPVLHDTRHACGKERTRHWCVCRSSWLIQLKSVDLNI 374 F + ++T+P+P+L RH C + H C+C + +I L D+ + Sbjct: 153 FIMLRNGLLTIPVPILAAQRHYCSRNEIEH-CLCSNLGVISLACDDITV 200
>P02980:TCR2_ECOLI Tetracycline resistance protein, class B - Escherichia coli| Length = 401 Score = 33.9 bits (76), Expect = 1.9 Identities = 59/274 (21%), Positives = 112/274 (40%), Gaps = 9/274 (3%) Frame = +2 Query: 395 VSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFGRFPYLLPCLFISLIAFAVLISCI 574 + +G+GL+ GP IGG+ + + P+ + L ++++ F V++ Sbjct: 134 LGASFGLGLIAGPIIGGFAGE-------------ISPHSPFFIAAL-LNIVTFLVVM--F 177 Query: 575 WLPETLHMHKNLEREVEMSGDSRVTDPHREVRHPEKKSLYKNWPLMSSIIAYCVFTLHDT 754 W ET + N + EV + S + +L+K P++ +I Y L Sbjct: 178 WFRETKNTRDNTDTEVGVETQS----------NSVYITLFKTMPIL--LIIYFSAQLIGQ 225 Query: 755 AYSEIFSLWAVSDKKYGGLSFSSKDVGQVLAASGAGLLLYQILVYRYVHKYLGSIISSRI 934 + ++ L+ ++ ++G ++S VG LA G GLL H + ++ RI Sbjct: 226 IPATVWVLF--TENRFG---WNSMMVGFSLA--GLGLL----------HSVFQAFVAGRI 268 Query: 935 A-------AVL--SIPLLATYPFMTHLSGTTLELAIYSAAVMKGTFATTILTGTCILQNS 1087 A AVL I + + F+ +S L + + G A L G +Q Sbjct: 269 ATKWGEKTAVLLGFIADSSAFAFLAFISEGWLVFPVL-ILLAGGGIALPALQGVMSIQTK 327 Query: 1088 AVSQNQRGAANGISTTAMSLFKAIAPAGAGVLFS 1189 + +Q+GA G+ + + I P V+++ Sbjct: 328 S---HQQGALQGLLVSLTNATGVIGPLLFAVIYN 358
>Q8N130:NPT2C_HUMAN Sodium-dependent phosphate transport protein 2C - Homo sapiens| (Human) Length = 599 Score = 33.9 bits (76), Expect = 1.9 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 8/122 (6%) Frame = +2 Query: 800 YGGLSFSSKDVGQVLAASGAGLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPF- 976 + G + VG +L A G+ L+L LV + K L S++ R+A V+ + A +PF Sbjct: 313 FAGTELTDLAVGCILLA-GSLLVLCGCLVL--IVKLLNSVLRGRVAQVVRTVINADFPFP 369 Query: 977 -------MTHLSGTTLELAIYSAAVMKGTFATTILTGTCILQNSAVSQNQRGAANGISTT 1135 + L+G L A+ S++V T A L G ++ G+ G +TT Sbjct: 370 LGWLGGYLAVLAGAGLTFALQSSSVF--TAAVVPLMGVGVISLDRAYPLLLGSNIGTTTT 427 Query: 1136 AM 1141 A+ Sbjct: 428 AL 429
>Q1RDA5:MDTG_ECOUT Multidrug resistance protein mdtG - Escherichia coli (strain UTI89| / UPEC) Length = 408 Score = 32.3 bits (72), Expect = 5.6 Identities = 22/73 (30%), Positives = 31/73 (42%) Frame = +2 Query: 386 LSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFGRFPYLLPCLFISLIAFAVLI 565 L +STG G ++GP GG LA P F S+ L+ C F++L Sbjct: 144 LGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASV------LILCFFVTLFCIREKF 197 Query: 566 SCIWLPETLHMHK 604 + E LHM + Sbjct: 198 QPVSKKEMLHMRE 210
>P25744:MDTG_ECOLI Multidrug resistance protein mdtG - Escherichia coli| Length = 408 Score = 32.3 bits (72), Expect = 5.6 Identities = 22/73 (30%), Positives = 31/73 (42%) Frame = +2 Query: 386 LSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFGRFPYLLPCLFISLIAFAVLI 565 L +STG G ++GP GG LA P F S+ L+ C F++L Sbjct: 144 LGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASV------LILCFFVTLFCIREKF 197 Query: 566 SCIWLPETLHMHK 604 + E LHM + Sbjct: 198 QPVSKKEMLHMRE 210
>Q8FIR9:MDTG_ECOL6 Multidrug resistance protein mdtG - Escherichia coli O6| Length = 408 Score = 32.3 bits (72), Expect = 5.6 Identities = 22/73 (30%), Positives = 31/73 (42%) Frame = +2 Query: 386 LSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFGRFPYLLPCLFISLIAFAVLI 565 L +STG G ++GP GG LA P F S+ L+ C F++L Sbjct: 144 LGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASV------LILCFFVTLFCIREKF 197 Query: 566 SCIWLPETLHMHK 604 + E LHM + Sbjct: 198 QPVSKKEMLHMRE 210
>Q0TJ20:MDTG_ECOL5 Multidrug resistance protein mdtG - Escherichia coli O6:K15:H31| (strain 536 / UPEC) Length = 408 Score = 32.3 bits (72), Expect = 5.6 Identities = 22/73 (30%), Positives = 31/73 (42%) Frame = +2 Query: 386 LSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFGRFPYLLPCLFISLIAFAVLI 565 L +STG G ++GP GG LA P F S+ L+ C F++L Sbjct: 144 LGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASV------LILCFFVTLFCIREKF 197 Query: 566 SCIWLPETLHMHK 604 + E LHM + Sbjct: 198 QPVSKKEMLHMRE 210
>A1A9U9:MDTG_ECOK1 Multidrug resistance protein mdtG - Escherichia coli O1:K1 / APEC| Length = 408 Score = 32.3 bits (72), Expect = 5.6 Identities = 22/73 (30%), Positives = 31/73 (42%) Frame = +2 Query: 386 LSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFGRFPYLLPCLFISLIAFAVLI 565 L +STG G ++GP GG LA P F S+ L+ C F++L Sbjct: 144 LGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASV------LILCFFVTLFCIREKF 197 Query: 566 SCIWLPETLHMHK 604 + E LHM + Sbjct: 198 QPVSKKEMLHMRE 210
>Q8X9I3:MDTG_ECO57 Multidrug resistance protein mdtG - Escherichia coli O157:H7| Length = 408 Score = 32.3 bits (72), Expect = 5.6 Identities = 22/73 (30%), Positives = 31/73 (42%) Frame = +2 Query: 386 LSVVSTGWGIGLVVGPAIGGYLAQPAKQYPGLFSEKSLFGRFPYLLPCLFISLIAFAVLI 565 L +STG G ++GP GG LA P F S+ L+ C F++L Sbjct: 144 LGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASV------LILCFFVTLFCIREKF 197 Query: 566 SCIWLPETLHMHK 604 + E LHM + Sbjct: 198 QPVSKKEMLHMRE 210
>O17444:VACHT_DROME Vesicular acetylcholine transporter - Drosophila melanogaster (Fruit| fly) Length = 578 Score = 32.0 bits (71), Expect = 7.4 Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 3/166 (1%) Frame = +2 Query: 806 GLSFSSKDVGQVLAASGAGLLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMTH 985 G+ F+SK + Q++ +G L+ +I G + I L+I +T F Sbjct: 98 GILFASKAIVQLMVNPFSGGLIDKI----------GYDLPMMIG--LTIMFFSTAVFAC- 144 Query: 986 LSGTTLELAIYSAAVMKGTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAP 1165 G++ + ++ ++ A G ++ + +N+R A GI+ +S +AP Sbjct: 145 --GSSYSVLFFARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFISFGCLVAP 202 Query: 1166 AGAGVLFSWAQKRQHAAFFPGDQMIFLILNIV---EVIGLVLTFKP 1294 G L+ F G ++ FLIL +V + + L+L KP Sbjct: 203 PFGGALYQ----------FAGKEVPFLILALVCLLDGLMLLLVMKP 238
>P34711:UNC17_CAEEL Vesicular acetylcholine transporter unc-17 - Caenorhabditis elegans| Length = 532 Score = 31.6 bits (70), Expect = 9.6 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%) Frame = +2 Query: 863 LLLYQILVYRYVHKYLGSIISSRIAAVLSIPLLATYPFMTHLS--GTTLELAIYSAAVMK 1036 L + L+ +V+ + G II + I L T F T + G + + +++ ++ Sbjct: 105 LFASKALLQIFVNPFSGYIIDRVGYEIPMILGLCTMFFSTAIFALGKSYGVLLFARSLQG 164 Query: 1037 GTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAGVLFSWAQKRQHAA 1216 A +G ++ + +N+R AA GI+ +S +AP VL+S A Sbjct: 165 FGSAFADTSGLAMIADRFTEENERSAALGIALAFISFGCLVAPPFGSVLYSLA------- 217 Query: 1217 FFPGDQMIFLILNIVEVIGLVLTF 1288 G + FLIL+ V + + F Sbjct: 218 ---GKPVPFLILSFVCLADAIAVF 238
>Q63HN8:RN213_HUMAN RING finger protein 213 - Homo sapiens (Human)| Length = 3280 Score = 31.6 bits (70), Expect = 9.6 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 9/55 (16%) Frame = +2 Query: 896 VHKYLGS--IIS----SRIAAVL---SIPLLATYPFMTHLSGTTLELAIYSAAVM 1033 V K++G I+S SR A L S+PLL P ++L GT E+AI++AAV+ Sbjct: 2473 VSKFIGECKILSPPDISRFATSLVDNSVPLLRAGPSDSNLDGTVTEMAIHAAAVL 2527
>P37718:ACSC_ACEXY Cellulose synthase operon protein C precursor - Acetobacter xylinus| (Gluconacetobacter xylinus) Length = 1302 Score = 31.6 bits (70), Expect = 9.6 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +2 Query: 1016 YSAAVMKGTFATTILTGTCILQNSAVSQNQRGAANGISTTAMSLFKAIAPAGAG 1177 Y++++ G ATT + G + N A +Q A S+T M +APA +G Sbjct: 6 YASSLSAGLLATTCVAGLLLQANGARAQQAAEAQAPASSTTMMQAATVAPAQSG 59 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 275,357,867 Number of extensions: 6299436 Number of successful extensions: 17286 Number of sequences better than 10.0: 29 Number of HSP's gapped: 17261 Number of HSP's successfully gapped: 30 Length of query: 523 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 405 Effective length of database: 68,319,629 Effective search space: 27669449745 Effective search space used: 27669449745 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
