ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf7l19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 96 3e-16
2dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 96 3e-16
3dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic D... 96 3e-16
4ref|NM_001057579.1| Oryza sativa (japonica cultivar-group) Os03g... 56 2e-04
5dbj|AK100153.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
6gb|DQ244404.1| Zea mays clone 7128 mRNA sequence 54 0.001
7ref|NM_001067494.1| Oryza sativa (japonica cultivar-group) Os08g... 52 0.004
8ref|NM_001058445.1| Oryza sativa (japonica cultivar-group) Os03g... 52 0.004
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.004
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.004
11dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.004
12gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 52 0.004
13dbj|AK062526.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.004
14ref|NM_001065230.1| Oryza sativa (japonica cultivar-group) Os07g... 50 0.015
15dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.015
16dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 50 0.015
17dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.015
18dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.015
19gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome 46 0.24
20ref|NM_001074311.1| Oryza sativa (japonica cultivar-group) Os11g... 46 0.24
21gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.24
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.24
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.24
24dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.24
25emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4,... 46 0.24
26gb|DQ244776.1| Zea mays clone 10596 mRNA sequence 44 0.93
27gb|DQ244171.1| Zea mays clone 2758 mRNA sequence 44 0.93
28gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, com... 44 0.93
29gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete s... 44 0.93
30gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, co... 44 0.93
31gb|AC097445.1| Drosophila melanogaster, chromosome 2R, region 43... 44 0.93
32gb|AC005198.1|AC005198 Drosophila melanogaster DNA sequence (P1 ... 44 0.93
33ref|NM_001038845.2| Mus musculus purinergic receptor P2X, ligand... 42 3.7
34dbj|AK242540.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 42 3.7
35ref|NM_011027.2| Mus musculus purinergic receptor P2X, ligand-ga... 42 3.7
36ref|NM_001038887.1| Mus musculus purinergic receptor P2X, ligand... 42 3.7
37ref|NM_001038839.1| Mus musculus purinergic receptor P2X, ligand... 42 3.7
38gb|CP000468.1| Escherichia coli APEC O1, complete genome 42 3.7
39gb|CP000247.1| Escherichia coli 536, complete genome 42 3.7
40gb|CP000243.1| Escherichia coli UTI89, complete genome 42 3.7
41ref|XM_879641.1| PREDICTED: Bos taurus hypothetical protein LOC6... 42 3.7
42gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 3.7
43gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 42 3.7
44gb|BC062808.1| Mus musculus purinergic receptor P2X, ligand-gate... 42 3.7
45dbj|AK145050.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 42 3.7
46dbj|AK145211.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cD... 42 3.7
47gb|AE014075.1| Escherichia coli CFT073, complete genome 42 3.7
48dbj|AK144585.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 42 3.7
49dbj|AK171132.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 3.7
50gb|AC020946.4| Homo sapiens chromosome 19 clone LLNLF-76F6, comp... 42 3.7
51gb|AC006304.4| Arabidopsis thaliana chromosome 2 clone T1O16 map... 42 3.7
52gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 3.7
53emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 3.7
54dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.7
55gb|AC114632.9| Mus musculus chromosome 5, clone RP24-114E20, com... 42 3.7
56emb|AJ251928.1|BRO251928 Bucegia romanica 18S rRNA gene, 5.8S rR... 42 3.7
57emb|AJ489297.1|MMU489297 Mus musculus mRNA for P2X purinoceptor ... 42 3.7
58emb|AJ489296.1|MMU489296 Mus musculus mRNA for P2X purinoceptor ... 42 3.7
59emb|AJ009823.1|MMU9823 Mus musculus mRNA for P2X7 receptor subunit 42 3.7

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886
 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                           
Query: 556     ggtgatgcgcaccgggaacgaccaggtcacgctgcgcaggggcaacaactacttcatctg 615
               |||| |||| |||||| |||||||||| ||||| ||  | || |||||||||||||||||
Sbjct: 8847942 ggtgctgcggaccgggtacgaccaggtgacgctccggcgagggaacaactacttcatctg 8847883

                                                               
Query: 616     cggcctgccgggccactgcgacaagaacatgaagctcgccgtcaaggc 663
               |||| |||||||||||||||||     |||||||||||||||||||||
Sbjct: 8847882 cggcatgccgggccactgcgacgccggcatgaagctcgccgtcaaggc 8847835



 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                           
Query: 461     gtgttcaagtacgacaaggagctccacgacgtgacggtgctgggaggcaaggggtaccgg 520
               |||||||||||| ||||||||  |||||||||| ||||| | || |||||||||||||||
Sbjct: 8848034 gtgttcaagtacaacaaggagtaccacgacgtggcggtggtcggcggcaaggggtaccgg 8847975

                                 
Query: 521     cggtgcgaggtgccgagg 538
               |||||| |||||||||||
Sbjct: 8847974 cggtgcaaggtgccgagg 8847957



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                           
Query: 434     aagaccttctacgccggcgacgtgctcg 461
               ||||||||||||||||||||||||||||
Sbjct: 8848538 aagaccttctacgccggcgacgtgctcg 8848511



to top

>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1001_B06
          Length = 134810

 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                          
Query: 556    ggtgatgcgcaccgggaacgaccaggtcacgctgcgcaggggcaacaactacttcatctg 615
              |||| |||| |||||| |||||||||| ||||| ||  | || |||||||||||||||||
Sbjct: 118263 ggtgctgcggaccgggtacgaccaggtgacgctccggcgagggaacaactacttcatctg 118204

                                                              
Query: 616    cggcctgccgggccactgcgacaagaacatgaagctcgccgtcaaggc 663
              |||| |||||||||||||||||     |||||||||||||||||||||
Sbjct: 118203 cggcatgccgggccactgcgacgccggcatgaagctcgccgtcaaggc 118156



 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                          
Query: 461    gtgttcaagtacgacaaggagctccacgacgtgacggtgctgggaggcaaggggtaccgg 520
              |||||||||||| ||||||||  |||||||||| ||||| | || |||||||||||||||
Sbjct: 118355 gtgttcaagtacaacaaggagtaccacgacgtggcggtggtcggcggcaaggggtaccgg 118296

                                
Query: 521    cggtgcgaggtgccgagg 538
              |||||| |||||||||||
Sbjct: 118295 cggtgcaaggtgccgagg 118278



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                          
Query: 434    aagaccttctacgccggcgacgtgctcg 461
              ||||||||||||||||||||||||||||
Sbjct: 118859 aagaccttctacgccggcgacgtgctcg 118832



to top

>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528B02
          Length = 144495

 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 556   ggtgatgcgcaccgggaacgaccaggtcacgctgcgcaggggcaacaactacttcatctg 615
             |||| |||| |||||| |||||||||| ||||| ||  | || |||||||||||||||||
Sbjct: 13571 ggtgctgcggaccgggtacgaccaggtgacgctccggcgagggaacaactacttcatctg 13512

                                                             
Query: 616   cggcctgccgggccactgcgacaagaacatgaagctcgccgtcaaggc 663
             |||| |||||||||||||||||     |||||||||||||||||||||
Sbjct: 13511 cggcatgccgggccactgcgacgccggcatgaagctcgccgtcaaggc 13464



 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                         
Query: 461   gtgttcaagtacgacaaggagctccacgacgtgacggtgctgggaggcaaggggtaccgg 520
             |||||||||||| ||||||||  |||||||||| ||||| | || |||||||||||||||
Sbjct: 13663 gtgttcaagtacaacaaggagtaccacgacgtggcggtggtcggcggcaaggggtaccgg 13604

                               
Query: 521   cggtgcgaggtgccgagg 538
             |||||| |||||||||||
Sbjct: 13603 cggtgcaaggtgccgagg 13586



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 434   aagaccttctacgccggcgacgtgctcg 461
             ||||||||||||||||||||||||||||
Sbjct: 14167 aagaccttctacgccggcgacgtgctcg 14140



to top

>ref|NM_001057579.1| Oryza sativa (japonica cultivar-group) Os03g0709300 (Os03g0709300)
           mRNA, complete cds
          Length = 751

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 445 cgccggcgacgtgctcgtgttcaagtac 472
           ||||||||||||||||||||||||||||
Sbjct: 286 cgccggcgacgtgctcgtgttcaagtac 313



to top

>dbj|AK100153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015O19, full
           insert sequence
          Length = 752

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 445 cgccggcgacgtgctcgtgttcaagtac 472
           ||||||||||||||||||||||||||||
Sbjct: 287 cgccggcgacgtgctcgtgttcaagtac 314



to top

>gb|DQ244404.1| Zea mays clone 7128 mRNA sequence
          Length = 807

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 445 cgccggcgacgtgctcgtgttcaagtacgac 475
           |||||||||||| ||||||||||||||||||
Sbjct: 299 cgccggcgacgttctcgtgttcaagtacgac 329



to top

>ref|NM_001067494.1| Oryza sativa (japonica cultivar-group) Os08g0138400 (Os08g0138400)
           mRNA, complete cds
          Length = 573

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 604 ctacttcatctgcggcctgccgggccactgcgac 637
           |||||||||||||||| ||||||| |||||||||
Sbjct: 294 ctacttcatctgcggcgtgccggggcactgcgac 327



to top

>ref|NM_001058445.1| Oryza sativa (japonica cultivar-group) Os03g0850900 (Os03g0850900)
           mRNA, complete cds
          Length = 758

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 446 gccggcgacgtgctcgtgttcaagtacgac 475
           |||||||||||||| |||||||||||||||
Sbjct: 255 gccggcgacgtgctggtgttcaagtacgac 284



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                 
Query: 604     ctacttcatctgcggcctgccgggccactgcgac 637
               |||||||||||||||| ||||||| |||||||||
Sbjct: 2142169 ctacttcatctgcggcgtgccggggcactgcgac 2142202



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 446      gccggcgacgtgctcgtgttcaagtacgac 475
                |||||||||||||| |||||||||||||||
Sbjct: 35607199 gccggcgacgtgctggtgttcaagtacgac 35607228



 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 628      ccactgcgacaagaacatgaagctc 652
                |||||||| ||||||||||||||||
Sbjct: 32693867 ccactgcgccaagaacatgaagctc 32693843



to top

>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_D01
          Length = 97862

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 604   ctacttcatctgcggcctgccgggccactgcgac 637
             |||||||||||||||| ||||||| |||||||||
Sbjct: 20431 ctacttcatctgcggcgtgccggggcactgcgac 20464



to top

>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 446   gccggcgacgtgctcgtgttcaagtacgac 475
             |||||||||||||| |||||||||||||||
Sbjct: 50090 gccggcgacgtgctggtgttcaagtacgac 50119



to top

>dbj|AK062526.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-D10, full
           insert sequence
          Length = 759

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 446 gccggcgacgtgctcgtgttcaagtacgac 475
           |||||||||||||| |||||||||||||||
Sbjct: 256 gccggcgacgtgctggtgttcaagtacgac 285



to top

>ref|NM_001065230.1| Oryza sativa (japonica cultivar-group) Os07g0105000 (Os07g0105000)
           mRNA, complete cds
          Length = 588

 Score = 50.1 bits (25), Expect = 0.015
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 603 actacttcatctgcggcctgccgggccactgcg 635
           ||||||||||||||||| |||| ||||||||||
Sbjct: 305 actacttcatctgcggcgtgcccggccactgcg 337



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 50.1 bits (25), Expect = 0.015
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 603    actacttcatctgcggcctgccgggccactgcg 635
              ||||||||||||||||| |||| ||||||||||
Sbjct: 290510 actacttcatctgcggcgtgcccggccactgcg 290542



 Score = 42.1 bits (21), Expect = 3.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 603      actacttcatctgcggcctgccgggccactgcg 635
                |||||||| |||||||| | |||||||||||||
Sbjct: 22943730 actacttcctctgcggcttcccgggccactgcg 22943698



to top

>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0446F04
          Length = 175390

 Score = 50.1 bits (25), Expect = 0.015
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 603    actacttcatctgcggcctgccgggccactgcg 635
              ||||||||||||||||| |||| ||||||||||
Sbjct: 125374 actacttcatctgcggcgtgcccggccactgcg 125406



to top

>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1317D11
          Length = 135043

 Score = 50.1 bits (25), Expect = 0.015
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 603   actacttcatctgcggcctgccgggccactgcg 635
             ||||||||||||||||| |||| ||||||||||
Sbjct: 14748 actacttcatctgcggcgtgcccggccactgcg 14780



to top

>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0617C02
          Length = 135605

 Score = 50.1 bits (25), Expect = 0.015
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 603   actacttcatctgcggcctgccgggccactgcg 635
             ||||||||||||||||| |||| ||||||||||
Sbjct: 42509 actacttcatctgcggcgtgcccggccactgcg 42541



to top

>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome
          Length = 9965640

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 334     caccggcgcggccgcgatggcgg 356
               |||||||||||||||||||||||
Sbjct: 5813423 caccggcgcggccgcgatggcgg 5813401



 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 348     cgatggcggggcgggcgccgag 369
               ||||||||||||||||||||||
Sbjct: 3293190 cgatggcggggcgggcgccgag 3293169



to top

>ref|NM_001074311.1| Oryza sativa (japonica cultivar-group) Os11g0426400 (Os11g0426400)
           mRNA, complete cds
          Length = 282

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 601 caactacttcatctgcggcctgccgggccactgcg 635
           ||||||||||||||||||| | || ||||||||||
Sbjct: 213 caactacttcatctgcggcgtcccaggccactgcg 247



to top

>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0095J10 map near S6115, complete sequence
          Length = 123717

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 601   caactacttcatctgcggcctgccgggccactgcg 635
             ||||||||||||||||||| | || ||||||||||
Sbjct: 53567 caactacttcatctgcggcgtcccaggccactgcg 53601



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 601      caactacttcatctgcggcctgccgggccactgcg 635
                ||||||||||||||||||| | || ||||||||||
Sbjct: 12981670 caactacttcatctgcggcgtcccaggccactgcg 12981704



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 601      caactacttcatctgcggcctgccgggccactgcg 635
                ||||||||||||||||||| | || ||||||||||
Sbjct: 14790175 caactacttcatctgcggcgtccccggccactgcg 14790141



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 339     gcgcggccgcgatggcggggcgggcgccgag 369
               |||||||||||||| ||||||||||| ||||
Sbjct: 6841878 gcgcggccgcgatgccggggcgggcggcgag 6841908



to top

>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06,
             complete sequence
          Length = 107014

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 601   caactacttcatctgcggcctgccgggccactgcg 635
             ||||||||||||||||||| | || ||||||||||
Sbjct: 44113 caactacttcatctgcggcgtccccggccactgcg 44079



to top

>gb|DQ244776.1| Zea mays clone 10596 mRNA sequence
          Length = 716

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 565 caccgggaacgaccaggtcacgctgcgcaggggcaacaactacttcatctgcggcctgcc 624
           ||||||||||||||  ||||||||| |  | |||  |||||||||||||||| || | ||
Sbjct: 335 caccgggaacgaccgcgtcacgctgaggcgcggcgccaactacttcatctgcagcttccc 394

                     
Query: 625 gggccactgc 634
            |||||||||
Sbjct: 395 aggccactgc 404



to top

>gb|DQ244171.1| Zea mays clone 2758 mRNA sequence
          Length = 835

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 565 caccgggaacgaccaggtcacgctgcgcaggggcaacaactacttcatctgcggcctgcc 624
           ||||||||||||||  |||||||||    | |||| |||||||||||||||| || | ||
Sbjct: 373 caccgggaacgaccgcgtcacgctgaagcgcggcaccaactacttcatctgcagcttccc 432

                     
Query: 625 gggccactgc 634
            |||||||||
Sbjct: 433 aggccactgc 442



to top

>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome
          Length = 3483902

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 343     ggccgcgatggcggggcgggcg 364
               ||||||||||||||||||||||
Sbjct: 1609191 ggccgcgatggcggggcgggcg 1609212



to top

>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence
          Length = 21146708

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 241     cggatttgcggcgatggtggct 262
               ||||||||||||||||||||||
Sbjct: 3120323 cggatttgcggcgatggtggct 3120302



to top

>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence
          Length = 3294563

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 343     ggccgcgatggcggggcgggcg 364
               ||||||||||||||||||||||
Sbjct: 1064542 ggccgcgatggcggggcgggcg 1064563



to top

>gb|AC097445.1| Drosophila melanogaster, chromosome 2R, region 43A-43B, BAC clone
             BACR12F04, complete sequence
          Length = 197994

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 241   cggatttgcggcgatggtggct 262
             ||||||||||||||||||||||
Sbjct: 16296 cggatttgcggcgatggtggct 16317



to top

>gb|AC005198.1|AC005198 Drosophila melanogaster DNA sequence (P1 DS08462 (D163)), complete
             sequence
          Length = 81909

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 241   cggatttgcggcgatggtggct 262
             ||||||||||||||||||||||
Sbjct: 14852 cggatttgcggcgatggtggct 14873



to top

>ref|NM_001038845.2| Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7
           (P2rx7), transcript variant 2, mRNA
          Length = 1633

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 344 gtgcacaccaaggtcaaaggcatag 368



to top

>dbj|AK242540.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080318B12,
           full insert sequence
          Length = 769

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 448 cggcgacgtgctcgtgttcaagtac 472
           |||||| ||||||||||||||||||
Sbjct: 286 cggcgatgtgctcgtgttcaagtac 310



to top

>ref|NM_011027.2| Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7
           (P2rx7), transcript variant 1, mRNA
          Length = 4931

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 344 gtgcacaccaaggtcaaaggcatag 368



to top

>ref|NM_001038887.1| Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7
           (P2rx7), transcript variant 4, mRNA
          Length = 824

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 344 gtgcacaccaaggtcaaaggcatag 368



to top

>ref|NM_001038839.1| Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7
           (P2rx7), transcript variant 3, mRNA
          Length = 2563

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 344 gtgcacaccaaggtcaaaggcatag 368



to top

>gb|CP000468.1| Escherichia coli APEC O1, complete genome
          Length = 5082025

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     acgcgttttcactgcactgat 92
              |||||||||||||||||||||
Sbjct: 636514 acgcgttttcactgcactgat 636494



to top

>gb|CP000247.1| Escherichia coli 536, complete genome
          Length = 4938920

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     acgcgttttcactgcactgat 92
              |||||||||||||||||||||
Sbjct: 686925 acgcgttttcactgcactgat 686905



to top

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     acgcgttttcactgcactgat 92
              |||||||||||||||||||||
Sbjct: 634915 acgcgttttcactgcactgat 634895



to top

>ref|XM_879641.1| PREDICTED: Bos taurus hypothetical protein LOC615326 (LOC615326),
           mRNA
          Length = 1044

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 271 aggcggtgcggcggccaccgc 291
           |||||||||||||||||||||
Sbjct: 939 aggcggtgcggcggccaccgc 919



to top

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 278     gcggcggccaccgctctcgta 298
               |||||||||||||||||||||
Sbjct: 1909771 gcggcggccaccgctctcgta 1909791



to top

>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
              sequence
          Length = 162497

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 628    ccactgcgacaagaacatgaagctc 652
              |||||||| ||||||||||||||||
Sbjct: 140550 ccactgcgccaagaacatgaagctc 140574



to top

>gb|BC062808.1| Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7,
           mRNA (cDNA clone IMAGE:3465929), complete cds
          Length = 726

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 246 gtgcacaccaaggtcaaaggcatag 270



to top

>dbj|AK145050.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN
           full-length enriched library, clone:G830031J18
           product:purinergic receptor P2X, ligand-gated ion
           channel, 7, full insert sequence
          Length = 3543

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 199 gtgcacaccaaggtcaaaggcatag 223



to top

>dbj|AK145211.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN
           full-length enriched library, clone:G930020L04
           product:purinergic receptor P2X, ligand-gated ion
           channel, 7, full insert sequence
          Length = 4713

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 208 gtgcacaccaaggtcaaaggcatag 232



to top

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     acgcgttttcactgcactgat 92
              |||||||||||||||||||||
Sbjct: 693058 acgcgttttcactgcactgat 693038



to top

>dbj|AK144585.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
           library, clone:G730005I21 product:purinergic receptor
           P2X, ligand-gated ion channel, 7, full insert sequence
          Length = 1804

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 345 gtgcacaccaaggtcaaaggcatag 369



to top

>dbj|AK171132.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630226L08
           product:purinergic receptor P2X, ligand-gated ion
           channel, 7, full insert sequence
          Length = 1605

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 316 gtgcacaccaaggtcaaaggcatag 340



to top

>gb|AC020946.4| Homo sapiens chromosome 19 clone LLNLF-76F6, complete sequence
          Length = 36219

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 186   gagacagcacagccctgaagc 206
             |||||||||||||||||||||
Sbjct: 13196 gagacagcacagccctgaagc 13176



to top

>gb|AC006304.4| Arabidopsis thaliana chromosome 2 clone T1O16 map mi398, complete
            sequence
          Length = 89281

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 854  gtgtttcttaattgagtgtaaactt 878
            ||||||||||||||| |||||||||
Sbjct: 9265 gtgtttcttaattgaatgtaaactt 9289



to top

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   gcggcggccaccgctctcgta 298
             |||||||||||||||||||||
Sbjct: 69500 gcggcggccaccgctctcgta 69520



to top

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete
             sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   gcggcggccaccgctctcgta 298
             |||||||||||||||||||||
Sbjct: 68495 gcggcggccaccgctctcgta 68515



to top

>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 603   actacttcatctgcggcctgccgggccactgcg 635
             |||||||| |||||||| | |||||||||||||
Sbjct: 18944 actacttcctctgcggcttcccgggccactgcg 18912



to top

>gb|AC114632.9| Mus musculus chromosome 5, clone RP24-114E20, complete sequence
          Length = 160308

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 107    gtgcacaccaaggtccaaggcatag 131
              ||||||||||||||| |||||||||
Sbjct: 111675 gtgcacaccaaggtcaaaggcatag 111699



to top

>emb|AJ251928.1|BRO251928 Bucegia romanica 18S rRNA gene, 5.8S rRNA gene, 25S rRNA gene,
           internal transcribed spacer 1 (ITS1) and internal
           transcribed spacer 2 (ITS2)
          Length = 1951

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 441 tctacgccggcgacgtgctcg 461
           |||||||||||||||||||||
Sbjct: 427 tctacgccggcgacgtgctcg 407



to top

>emb|AJ489297.1|MMU489297 Mus musculus mRNA for P2X purinoceptor 7 (P2rx7 gene), strain
           BALB/c
          Length = 1788

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 181 gtgcacaccaaggtcaaaggcatag 205



to top

>emb|AJ489296.1|MMU489296 Mus musculus mRNA for P2X purinoceptor 7 (P2rx7 gene), strain
           C57BL/6
          Length = 1788

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 181 gtgcacaccaaggtcaaaggcatag 205



to top

>emb|AJ009823.1|MMU9823 Mus musculus mRNA for P2X7 receptor subunit
          Length = 1810

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 107 gtgcacaccaaggtccaaggcatag 131
           ||||||||||||||| |||||||||
Sbjct: 192 gtgcacaccaaggtcaaaggcatag 216


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 129,635,297
Number of extensions: 6390885
Number of successful extensions: 121305
Number of sequences better than 10.0: 59
Number of HSP's gapped: 121300
Number of HSP's successfully gapped: 68
Length of query: 977
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 954
Effective length of database: 18,503,978,556
Effective search space: 17652795542424
Effective search space used: 17652795542424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top