ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf7l02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK106170:Os08g0432500 207 7e-55
2Os01g0833600:Os01g0833600 49 7e-06
3Os04g0151600:Os04g0151600 30 3.3
4AK102856:Os02g0130900 29 4.3
5AK071295:Os04g0321800 29 5.6
6AK069106:Os04g0321800 29 5.6
7AY395294:Os07g0588700 28 7.4
8AK103440:Os07g0191000 28 7.4
9AK071379:Os07g0191000 28 7.4

>AK106170:Os08g0432500 |
          Length = 162
 Score =  207 bits (526), Expect(2) = 7e-55
 Identities = 98/111 (88%), Positives = 107/111 (96%)
 Frame = +1

Query: 247 GKGGGVLDRPAEKVSPGRQSEFDKKKSRKMSPPFRVVLHNDNENRREYVVQVLMKVIPGM 426
           GKGGGVLDRP EKV+PGRQSEFD +KSRKM+PP+RV+LHNDN NRREYVVQVLMKVIPGM
Sbjct: 52  GKGGGVLDRPIEKVTPGRQSEFDVRKSRKMTPPYRVLLHNDNYNRREYVVQVLMKVIPGM 111

Query: 427 TVDNAVNIMQEAHVNGMAVVIVCSQPEAEEHCTALRGNGLRSSIEPASGGC 579
           TVDNAVNIMQEAHVNG++VVI+CSQ EAEEHCT+LRGNGLRSSIEPASGGC
Sbjct: 112 TVDNAVNIMQEAHVNGLSVVIICSQSEAEEHCTSLRGNGLRSSIEPASGGC 162



 Score = 25.8 bits (55), Expect(2) = 7e-55
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 125 PPSIALSTNRSPNNHA-VVAGNTCSFYRKMLPSP 223
           P  +ALS +R  N+H   V G   + YR   P+P
Sbjct: 6   PSRVALSASRLSNHHHHAVGGERYAIYRGRCPNP 39



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>Os01g0833600:Os01g0833600 |
          Length = 172

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
 Frame = +1

Query: 253 GGGVLDRPAEKVSP----------GRQSEFDKKKSRKMSPPFRVVLHNDNENRREYVVQV 402
           GG +L+RPA   S           G       ++       ++V+L +D  +  + V + 
Sbjct: 53  GGALLERPAFDQSQLDTLPVTQEGGDTGRMRDRRGSGSGDSYKVLLIDDARHTEKLVEKA 112

Query: 403 LMKVIPGMTVDNAVNIMQEAHVNGMAVVIVCSQPEAEEHCTALRGNGLRSSIEPAS 570
           L +V+P +T + A  +   +   G A+VIV  +  AE +   +   GLRS+IEP S
Sbjct: 113 LPQVVPSVTAEAARQLFHASRQKGAALVIVAVKEHAEFYAQMMVRQGLRSAIEPES 168



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>Os04g0151600:Os04g0151600 |
          Length = 357

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 103 LPGCSLPSALNRPLHEPLPQQPR 171
           LP C+ P A  RP H+P P +PR
Sbjct: 167 LPLCTPPLASRRPPHQPPPMEPR 189



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>AK102856:Os02g0130900 |
          Length = 108

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -1

Query: 296 PGETFSAGRSSTPPPLPGAAAVITM 222
           P  + S G SSTPPPLP AA   TM
Sbjct: 47  PSGSPSRGCSSTPPPLPSAATRGTM 71



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>AK071295:Os04g0321800 |
          Length = 460

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 15 SPPPLPASRAQPRRPSLRQLTSG 83
          +PPP PA+ A P RP  R  T G
Sbjct: 18 APPPAPAAEAVPSRPLARDATYG 40



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>AK069106:Os04g0321800 |
          Length = 282

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 15 SPPPLPASRAQPRRPSLRQLTSG 83
          +PPP PA+ A P RP  R  T G
Sbjct: 18 APPPAPAAEAVPSRPLARDATYG 40



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>AY395294:Os07g0588700 |
          Length = 226

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +1

Query: 265 LDRPAEKVSPGRQSEFDKKKSRKMSPPFRVVLHNDNENRREYVVQVLMKVIPGMTVDNAV 444
           +D  A +V P +  +FD  KSR +S    V + +D+E   EY+   L+ +  G+  D   
Sbjct: 17  VDFRAHQVFPSKHHDFDTSKSRNISG--SVAIGSDSE--EEYLATSLLMLAHGIR-DETK 71

Query: 445 NIMQEAHVNGMAV 483
           +I     V G+ V
Sbjct: 72  DIRGMGDVKGVGV 84



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>AK103440:Os07g0191000 |
          Length = 340

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 3   TRTLSPP-PLPASRAQPRRPSLRQLTSGLLPGSYA 104
           T T+ P  PLP SRA PR    R L +GLL GS A
Sbjct: 5   TSTVPPTSPLPHSRAAPR----RHLRAGLLHGSVA 35



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>AK071379:Os07g0191000 |
          Length = 340

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 3   TRTLSPP-PLPASRAQPRRPSLRQLTSGLLPGSYA 104
           T T+ P  PLP SRA PR    R L +GLL GS A
Sbjct: 5   TSTVPPTSPLPHSRAAPR----RHLRAGLLHGSVA 35


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 29,147,435
Number of extensions: 690339
Number of successful extensions: 2728
Number of sequences better than 10.0: 9
Number of HSP's gapped: 2726
Number of HSP's successfully gapped: 10
Length of query: 321
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 220
Effective length of database: 11,355,714
Effective search space: 2498257080
Effective search space used: 2498257080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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