ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf10g16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK065414:Os01g0702000 | 375 | e-139 | 2 | AK105899:Os08g0357000 | 214 | 2e-55 | 3 | AK070322:Os08g0357000 | 214 | 2e-55 | 4 | AK112035:Os08g0357000 | 182 | 5e-46 | 5 | AK102498:Os02g0517300 | 33 | 0.39 | 6 | AK067500:Os02g0517300 | 33 | 0.39 | 7 | AK121110:Os04g0107600 | 32 | 0.86 | 8 | AK058573:Os04g0107600 | 32 | 0.86 | 9 | AY339376:Os03g0150200 | 32 | 1.5 | 10 | AK070157: | 31 | 2.5 | 11 | AK100439:Os01g0769000 | 31 | 2.5 | 12 | AK072195:Os01g0769000 | 31 | 2.5 | 13 | AK068610:Os04g0542900 | 30 | 4.3 | 14 | AK072980:Os04g0527700 | 30 | 5.6 | 15 | AK104359:Os04g0530500 | 29 | 7.3 | 16 | AK070732:Os04g0530500 | 29 | 7.3 | 17 | AK068085:Os05g0170800 | 29 | 7.3 | 18 | AK119958: | 29 | 9.5 | 19 | AK108141: | 29 | 9.5 | 20 | AK071357:Os03g0397300 | 29 | 9.5 |
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>AK065414:Os01g0702000 | Length = 331 Score = 375 bits (964), Expect(2) = e-139 Identities = 196/251 (78%), Positives = 211/251 (84%), Gaps = 5/251 (1%) Frame = +3 Query: 186 MEVIRGPILPRCAAPA---LTSGSRIGGQLLXXXXXXXXASGAVSPGDYHAVSPRFFGAP 356 ME+I GP+LPR AAPA LTS ++I GQLL A G GD++ + RFFG P Sbjct: 1 MEIINGPVLPRYAAPATGALTSDAKISGQLLRRVHLRRRACGL--QGDHYRAARRFFGFP 58 Query: 357 TQHHSTGSW--PVRCSYGSSSDGDGAPPANFDASGEEFVDSSVMEAVELRCVSDGFVIRM 530 ++ H+ W PV CSYGSSSDGDGA A++DASGEEFV+SSVMEAVELR VSDGFVI+M Sbjct: 59 SERHARSGWVWPVCCSYGSSSDGDGAAAADYDASGEEFVNSSVMEAVELRSVSDGFVIKM 118 Query: 531 RDGRNLRCVQNNPRVLRLRDSTPHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALRNIRI 710 RDG+NLRCVQNNPRVLRLRDS PHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALRNIRI Sbjct: 119 RDGKNLRCVQNNPRVLRLRDSAPHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALRNIRI 178 Query: 711 PRPTIYNVVKEMTEMMGYTVRLVRITEMVHDAYYSRLYLAKTGNEEEVISFDLKPSDAIN 890 PRPTIYNVVKEMTE MGY VRLVRITEMVHDAYYSRLYLAK GNEEE IS DLKPSDAIN Sbjct: 179 PRPTIYNVVKEMTERMGYAVRLVRITEMVHDAYYSRLYLAKIGNEEETISLDLKPSDAIN 238 Query: 891 IAFRCKVPIQV 923 IAFRCKVPIQV Sbjct: 239 IAFRCKVPIQV 249 Score = 139 bits (350), Expect(2) = e-139 Identities = 66/82 (80%), Positives = 73/82 (89%) Frame = +2 Query: 923 HKRIAYNNGLKVIQPKPTGSYVNSDQIQYARLDKPGDQPCFEAQEFDLVRGMLVAAVEER 1102 ++RIAYNNGLKV+QP P+ SYV+SDQ QY RLD+P DQPCFEAQEFDLVR MLVAAVEER Sbjct: 250 NRRIAYNNGLKVVQPTPSESYVSSDQFQYTRLDRPDDQPCFEAQEFDLVRNMLVAAVEER 309 Query: 1103 YKDAAQYRDRLLMFRANKKNTI 1168 YKDAAQYRD+L MFRA KKN I Sbjct: 310 YKDAAQYRDQLFMFRAKKKNMI 331
>AK105899:Os08g0357000 | Length = 325 Score = 214 bits (544), Expect = 2e-55 Identities = 104/180 (57%), Positives = 140/180 (77%) Frame = +3 Query: 396 SYGSSSDGDGAPPANFDASGEEFVDSSVMEAVELRCVSDGFVIRMRDGRNLRCVQNNPRV 575 S+ SSSDG+G NF S E++V+S+V+EAVE+R ++G+VI+MRDG+NLRCV NN + Sbjct: 67 SFSSSSDGNGYMAGNFSESDEDYVNSTVLEAVEVRSGAEGYVIKMRDGKNLRCVHNNSQG 126 Query: 576 LRLRDSTPHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALRNIRIPRPTIYNVVKEMTEM 755 + +S P AIVL++EDGS+ LLPIIV+E PS++L+AA+RN+ I RPTIY VVKEM + Sbjct: 127 RNIPESAPQPAIVLRIEDGSETLLPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDK 186 Query: 756 MGYTVRLVRITEMVHDAYYSRLYLAKTGNEEEVISFDLKPSDAINIAFRCKVPIQVISAL 935 MGY V+LVRI + + +AY + L+L K G+ E I+FDL+PSDAINIA RCKVPIQV +L Sbjct: 187 MGYEVKLVRINKRIQEAYCAELFLTKVGDHTESITFDLRPSDAINIAVRCKVPIQVHRSL 246 Score = 88.2 bits (217), Expect = 1e-17 Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 1/98 (1%) Frame = +2 Query: 872 AIRCHQHCFPVQGSYTSHKRIAYNNGLKVIQPKPTGSYVN-SDQIQYARLDKPGDQPCFE 1048 A+RC P+Q H+ +AY++G++ ++P SD + + LD+P QPC E Sbjct: 233 AVRCK---VPIQ----VHRSLAYSDGIRSVEPARMAIAAGMSDGLLFTELDRPDGQPCVE 285 Query: 1049 AQEFDLVRGMLVAAVEERYKDAAQYRDRLLMFRANKKN 1162 AQEF L+R ML+AAVEERYKDAA +RD+L++ R+ +KN Sbjct: 286 AQEFGLIRNMLIAAVEERYKDAATWRDKLMLLRSKRKN 323
>AK070322:Os08g0357000 | Length = 325 Score = 214 bits (544), Expect = 2e-55 Identities = 104/180 (57%), Positives = 140/180 (77%) Frame = +3 Query: 396 SYGSSSDGDGAPPANFDASGEEFVDSSVMEAVELRCVSDGFVIRMRDGRNLRCVQNNPRV 575 S+ SSSDG+G NF S E++V+S+V+EAVE+R ++G+VI+MRDG+NLRCV NN + Sbjct: 67 SFSSSSDGNGYMAGNFSESDEDYVNSTVLEAVEVRSGAEGYVIKMRDGKNLRCVHNNSQG 126 Query: 576 LRLRDSTPHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALRNIRIPRPTIYNVVKEMTEM 755 + +S P AIVL++EDGS+ LLPIIV+E PS++L+AA+RN+ I RPTIY VVKEM + Sbjct: 127 RNIPESAPQPAIVLRIEDGSETLLPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDK 186 Query: 756 MGYTVRLVRITEMVHDAYYSRLYLAKTGNEEEVISFDLKPSDAINIAFRCKVPIQVISAL 935 MGY V+LVRI + + +AY + L+L K G+ E I+FDL+PSDAINIA RCKVPIQV +L Sbjct: 187 MGYEVKLVRINKRIQEAYCAELFLTKVGDHTESITFDLRPSDAINIAVRCKVPIQVHRSL 246 Score = 88.2 bits (217), Expect = 1e-17 Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 1/98 (1%) Frame = +2 Query: 872 AIRCHQHCFPVQGSYTSHKRIAYNNGLKVIQPKPTGSYVN-SDQIQYARLDKPGDQPCFE 1048 A+RC P+Q H+ +AY++G++ ++P SD + + LD+P QPC E Sbjct: 233 AVRCK---VPIQ----VHRSLAYSDGIRSVEPARMAIAAGMSDGLLFTELDRPDGQPCVE 285 Query: 1049 AQEFDLVRGMLVAAVEERYKDAAQYRDRLLMFRANKKN 1162 AQEF L+R ML+AAVEERYKDAA +RD+L++ R+ +KN Sbjct: 286 AQEFGLIRNMLIAAVEERYKDAATWRDKLMLLRSKRKN 323
>AK112035:Os08g0357000 | Length = 314 Score = 182 bits (462), Expect = 5e-46 Identities = 88/149 (59%), Positives = 117/149 (78%) Frame = +3 Query: 489 VELRCVSDGFVIRMRDGRNLRCVQNNPRVLRLRDSTPHHAIVLKMEDGSDLLLPIIVMET 668 VE+R ++G+VI+MRDG+NLRCV NN + + +S P AIVL++EDGS+ LLPIIV+E Sbjct: 87 VEVRSGAEGYVIKMRDGKNLRCVHNNSQGRNIPESAPQPAIVLRIEDGSETLLPIIVLEM 146 Query: 669 PSIMLLAALRNIRIPRPTIYNVVKEMTEMMGYTVRLVRITEMVHDAYYSRLYLAKTGNEE 848 PS++L+AA+RN+ I RPTIY VVKEM + MGY V+LVRI + + +AY + L+L K G+ Sbjct: 147 PSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELFLTKVGDHT 206 Query: 849 EVISFDLKPSDAINIAFRCKVPIQVISAL 935 E I+FDL+PSDAINIA RCKVPIQV +L Sbjct: 207 ESITFDLRPSDAINIAVRCKVPIQVHRSL 235 Score = 88.2 bits (217), Expect = 1e-17 Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 1/98 (1%) Frame = +2 Query: 872 AIRCHQHCFPVQGSYTSHKRIAYNNGLKVIQPKPTGSYVN-SDQIQYARLDKPGDQPCFE 1048 A+RC P+Q H+ +AY++G++ ++P SD + + LD+P QPC E Sbjct: 222 AVRCK---VPIQ----VHRSLAYSDGIRSVEPARMAIAAGMSDGLLFTELDRPDGQPCVE 274 Query: 1049 AQEFDLVRGMLVAAVEERYKDAAQYRDRLLMFRANKKN 1162 AQEF L+R ML+AAVEERYKDAA +RD+L++ R+ +KN Sbjct: 275 AQEFGLIRNMLIAAVEERYKDAATWRDKLMLLRSKRKN 312
>AK102498:Os02g0517300 | Length = 815 Score = 33.5 bits (75), Expect = 0.39 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 408 SSDGDGAPPANFDASGEEFVDSSVMEAVELRCVSDG 515 SS A P NFDA+ F +E +EL C+ DG Sbjct: 15 SSSSSAAAPDNFDAAQYSFFGKEPLEGLELSCLEDG 50
>AK067500:Os02g0517300 | Length = 815 Score = 33.5 bits (75), Expect = 0.39 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 408 SSDGDGAPPANFDASGEEFVDSSVMEAVELRCVSDG 515 SS A P NFDA+ F +E +EL C+ DG Sbjct: 15 SSSSSAAAPDNFDAAQYSFFGKEPLEGLELSCLEDG 50
>AK121110:Os04g0107600 | Length = 623 Score = 32.3 bits (72), Expect = 0.86 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 14/104 (13%) Frame = +3 Query: 360 QHHSTGSWPVRCSYGSSSDGDGAPPANFDAS---GEEFVDSSVMEAVELRCVSDGF---V 521 +H +TG + C G D DG + D S G E SS+++AV L C +G V Sbjct: 286 EHGATGMTTLDCGGGLGVDYDGTRSGSSDMSVAYGLEQYASSIVQAVRLTCDDNGVPHPV 345 Query: 522 IRMRDGRNLRCVQNNPRVLRLRDSTP--------HHAIVLKMED 629 + GR + ++ +L + P HH ++ K++D Sbjct: 346 LCTESGRAM-ASHHSMIILEALSAIPEPQDEEDTHHRLLSKIQD 388
>AK058573:Os04g0107600 | Length = 623 Score = 32.3 bits (72), Expect = 0.86 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 14/104 (13%) Frame = +3 Query: 360 QHHSTGSWPVRCSYGSSSDGDGAPPANFDAS---GEEFVDSSVMEAVELRCVSDGF---V 521 +H +TG + C G D DG + D S G E SS+++AV L C +G V Sbjct: 286 EHGATGMTTLDCGGGLGVDYDGTRSGSSDMSVAYGLEQYASSIVQAVRLTCDDNGVPHPV 345 Query: 522 IRMRDGRNLRCVQNNPRVLRLRDSTP--------HHAIVLKMED 629 + GR + ++ +L + P HH ++ K++D Sbjct: 346 LCTESGRAM-ASHHSMIILEALSAIPEPQDEEDTHHRLLSKIQD 388
>AY339376:Os03g0150200 | Length = 141 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/67 (34%), Positives = 29/67 (43%) Frame = +3 Query: 312 PGDYHAVSPRFFGAPTQHHSTGSWPVRCSYGSSSDGDGAPPANFDASGEEFVDSSVMEAV 491 PGD+H GA ++ STGS SSS PPAN A+ + V Sbjct: 72 PGDHH------HGAASRMTSTGS--------SSSSFTTPPPANSSAAAGRGGSDRTTDKV 117 Query: 492 ELRCVSD 512 EL C+ D Sbjct: 118 ELECLDD 124
>AK070157: | Length = 809 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +3 Query: 402 GSSSDGDGAPPANFDASGEEFVDSSVMEAVELRCVSDG 515 G +S A NFDA F +E +EL C+ DG Sbjct: 11 GGASSSSPAAAGNFDAGQYAFFGKEPLEGLELSCLEDG 48
>AK100439:Os01g0769000 | Length = 833 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +3 Query: 402 GSSSDGDGAPPANFDASGEEFVDSSVMEAVELRCVSDG 515 G +S A NFDA F +E +EL C+ DG Sbjct: 11 GGASSSSPAAAGNFDAGQYAFFGKEPLEGLELSCLEDG 48
>AK072195:Os01g0769000 | Length = 833 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +3 Query: 402 GSSSDGDGAPPANFDASGEEFVDSSVMEAVELRCVSDG 515 G +S A NFDA F +E +EL C+ DG Sbjct: 11 GGASSSSPAAAGNFDAGQYAFFGKEPLEGLELSCLEDG 48
>AK068610:Os04g0542900 | Length = 519 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 7/69 (10%) Frame = +2 Query: 611 RAQDGRWERSSAPHYCHGDTKYY-------ATGRPSEHSDSKANNL*CGKGDDRNDGIHG 769 R +DG WER H +Y ++ RP +H + A GD+RNDG Sbjct: 139 RREDGDWERVDGRKQ-HQHNQYEEEYRRDSSSRRPQQHQQAPAYRRQQQDGDERNDGGWQ 197 Query: 770 TFGADYRNG 796 T G +G Sbjct: 198 TVGEKKHHG 206
>AK072980:Os04g0527700 | Length = 151 Score = 29.6 bits (65), Expect = 5.6 Identities = 24/104 (23%), Positives = 41/104 (39%) Frame = +3 Query: 354 PTQHHSTGSWPVRCSYGSSSDGDGAPPANFDASGEEFVDSSVMEAVELRCVSDGFVIRMR 533 P + S P SS + A +FD G E +D V +A++ CV++ Sbjct: 18 PAVEAAPSSSPSPAPAPSSLEALAAEAMSFDEDGNESIDVKVQKALDCPCVAE------- 70 Query: 534 DGRNLRCVQNNPRVLRLRDSTPHHAIVLKMEDGSDLLLPIIVME 665 ++N P + D+ + E GSD + P I ++ Sbjct: 71 -------LKNGPCGSQFVDAFSCFLKSTEEEKGSDCVKPFIALQ 107
>AK104359:Os04g0530500 | Length = 253 Score = 29.3 bits (64), Expect = 7.3 Identities = 16/52 (30%), Positives = 20/52 (38%) Frame = -1 Query: 1163 CSFCLPGT*EGDLCIEQHLYNVPXXXXQACRAPNQTPGLQSKAGRRACPVSR 1008 C+ CL E + + HLY P C T S RR CPV + Sbjct: 39 CNICLDFAAEPVVTLCGHLYCWPCIYEWLCPGVGSTASNNSSLARRQCPVCK 90
>AK070732:Os04g0530500 | Length = 253 Score = 29.3 bits (64), Expect = 7.3 Identities = 16/52 (30%), Positives = 20/52 (38%) Frame = -1 Query: 1163 CSFCLPGT*EGDLCIEQHLYNVPXXXXQACRAPNQTPGLQSKAGRRACPVSR 1008 C+ CL E + + HLY P C T S RR CPV + Sbjct: 39 CNICLDFAAEPVVTLCGHLYCWPCIYEWLCPGVGSTASNNSSLARRQCPVCK 90
>AK068085:Os05g0170800 | Length = 300 Score = 29.3 bits (64), Expect = 7.3 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Frame = +2 Query: 1043 FEAQE--FDLVRGMLVAAVEERYKDAAQYRDRL 1135 FE +E L R + A EER++DAA+YRD L Sbjct: 122 FEEEEPVLRLRRSLKKAVEEERFEDAAKYRDEL 154
>AK119958: | Length = 162 Score = 28.9 bits (63), Expect = 9.5 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = -1 Query: 803 IMHHFCNPHQTYRVSHHFGHLLYHIINCWPWNPNVP 696 + HH N H ++ HH G LL C P P P Sbjct: 61 LQHHGNNHHHHHQHHHHHGGLLRRRRRCTPRTPTPP 96
>AK108141: | Length = 314 Score = 28.9 bits (63), Expect = 9.5 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -1 Query: 1133 GDLCIEQHLYNVPXXXXQACRAPNQTPGLQSKAGRRACPVSRIGFGQSSRSSQLALAVSL 954 G+ C E H+ V A +AP+ P + + PVS+IG GQ S+ A + Sbjct: 147 GEQCNEVHINIVKGGASGASQAPDGQP---QETPAVSAPVSQIGDGQVQASTSGAPVSQI 203 Query: 953 SD 948 SD Sbjct: 204 SD 205
>AK071357:Os03g0397300 | Length = 529 Score = 28.9 bits (63), Expect = 9.5 Identities = 10/34 (29%), Positives = 17/34 (50%) Frame = +1 Query: 589 ILRLTMLSCSRWKMGAIFCSPLLSWRHQVLCYWP 690 + RLT+L C+ W ++ W ++ C WP Sbjct: 4 VTRLTLLLCAAWAAALLYGEMGAYWAARLSCSWP 37 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 41,981,233 Number of extensions: 989937 Number of successful extensions: 3036 Number of sequences better than 10.0: 20 Number of HSP's gapped: 3028 Number of HSP's successfully gapped: 24 Length of query: 483 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 378 Effective length of database: 11,195,550 Effective search space: 4231917900 Effective search space used: 4231917900 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
