ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf2f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001074965.1| Oryza sativa (japonica cultivar-group) Os11g... 264 9e-67
2gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome... 264 9e-67
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 264 9e-67
4dbj|AK066296.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 9e-67
5emb|CT832795.1| Oryza sativa (indica cultivar-group) cDNA clone:... 248 6e-62
6gb|AY104794.1| Zea mays PCO093477 mRNA sequence 117 1e-22
7ref|NM_001074960.1| Oryza sativa (japonica cultivar-group) Os11g... 80 3e-11
8gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome... 80 3e-11
9ref|XM_504217.1| Yarrowia lipolytica CLIB122, YALI0E21109g predi... 48 0.11
10emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 48 0.11
11emb|CT831462.1| Oryza sativa (indica cultivar-group) cDNA clone:... 46 0.42
12gb|AC004629.1| Homo sapiens chromosome 5, BAC clone 87L18 (LBNL ... 46 0.42
13gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 46 0.42
14gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 46 0.42
15gb|AC106781.2| Homo sapiens chromosome 5 clone RP11-346A9, compl... 46 0.42
16emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 46 0.42
17gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 46 0.42
18gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromoso... 46 0.42
19gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 1.6
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.6
21ref|XM_684855.1| PREDICTED: Danio rerio similar to HBxAg transac... 44 1.6
22gb|AF329639.1|AF329639 Drosophila virilis hairy 5' cis-regulator... 44 1.6
23emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4,... 44 1.6
24gb|AY111044.1| Zea mays CL38592_1 mRNA sequence 44 1.6
25emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 1.6
26emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chro... 44 1.6
27emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromo... 42 6.5
28gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, com... 42 6.5
29gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete ... 42 6.5
30emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 42 6.5
31ref|XM_001058700.1| PREDICTED: Rattus norvegicus hypothetical pr... 42 6.5
32gb|AC188111.1| Pongo pygmaeus abelii chromosome UNK clone CH276-... 42 6.5
33gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, co... 42 6.5
34gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 6.5
35gb|AC169385.2| Mus musculus BAC clone RP23-247C1 from chromosome... 42 6.5
36gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 6.5
37gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome... 42 6.5
38gb|AC134570.5| Mus musculus BAC clone RP24-252B18 from chromosom... 42 6.5
39gb|AC126255.3| Mus musculus BAC clone RP24-218F22 from chromosom... 42 6.5
40gb|AC095558.10| Rattus norvegicus 18 BAC CH230-8D7 (Children's H... 42 6.5
41gb|AC091517.10| Homo sapiens 12 BAC RP11-777M1 (Roswell Park Can... 42 6.5
42emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 i... 42 6.5
43dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 6.5
44emb|AL592402.12| Human DNA sequence from clone RP11-554K11 on ch... 42 6.5
45ref|XM_688139.1| PREDICTED: Danio rerio similar to Jmjd2al prote... 42 6.5
46gb|AC154606.2| Mus musculus BAC clone RP23-252E10 from chromosom... 42 6.5
47gb|AC160932.3| Mus musculus BAC clone RP24-275L14 from chromosom... 42 6.5
48gb|AC154474.2| Mus musculus BAC clone RP24-122P10 from chromosom... 42 6.5
49emb|BX784028.13| Zebrafish DNA sequence from clone DKEY-40C11 in... 42 6.5
50dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic D... 42 6.5
51ref|XM_950841.1| Neurospora crassa OR74A hypothetical protein (N... 42 6.5
52emb|BX842598.1| Neurospora crassa DNA linkage group II BAC clone... 42 6.5
53gb|AY110926.1| Zea mays CL2322_1 mRNA sequence 42 6.5
54gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, co... 42 6.5
55gb|AC151409.2| Mus musculus BAC clone RP24-541K8 from 18, comple... 42 6.5
56emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on ch... 42 6.5
57gb|U04434.1|ZMFHT Zea mays flavanone 3-beta-hydroxylase (fht) mR... 42 6.5

>ref|NM_001074965.1| Oryza sativa (japonica cultivar-group) Os11g0672300 (Os11g0672300)
           mRNA, complete cds
          Length = 1829
 Score =  264 bits (133), Expect = 9e-67
 Identities = 298/353 (84%)
 Strand = Plus / Plus

                                                                       
Query: 135 gcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcgccgacgcggcgcag 194
           |||||||| || ||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 83  gcgcagttcgccggagtggacgcctacggcctgatcaagatgatcgccgaggcggcgcag 142

                                                                       
Query: 195 acggtccggaggaacagagccacctgcctgcagctcgcgcgccgcgccaggatgatcggg 254
           ||||| ||| | ||||| || || ||||||||||||||||| |||  || ||||||||| 
Sbjct: 143 acggtgcggcgcaacagggcgacgtgcctgcagctcgcgcggcgcctcaagatgatcgga 202

                                                                       
Query: 255 gacctgatgcaccagctccacgccgcgcacctcatgcagcaaccggagacgaggaacccc 314
           || ||  |  | ||||||||||  ||||| || |||||||| ||||||||||||||||| 
Sbjct: 203 gatcttctcaagcagctccacggtgcgcagctgatgcagcagccggagacgaggaacccg 262

                                                                       
Query: 315 atggagcagctggaggagacgctccggcgcgcgctgtcgctcgtcaggtcctgccagcgc 374
            |||||||||||||||||||||||||||| |||     ||||||| |||| |||||| ||
Sbjct: 263 gtggagcagctggaggagacgctccggcgagcgtacctgctcgtccggtcatgccagggc 322

                                                                       
Query: 375 cgcgggtacctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtg 434
           ||  | ||| | ||||| ||||||||||| |  |||||||||||||||||| | || |||
Sbjct: 323 cggagctacgtgtaccgctgcttcatgggaggccggcacgccgacgagctcagggaagtg 382

                                                                
Query: 435 cagggtgagatcaccttctacctccagcttttccctctcctcagctacgtcga 487
           ||| |||||||| |||||||||||||||| ||||||||| ||||||| |||||
Sbjct: 383 cagagtgagatcgccttctacctccagctcttccctctcgtcagctatgtcga 435



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 568 aggcacctgtggtaagaccatattttgtgcc 598
           |||||||| ||||||||||||||||||||||
Sbjct: 489 aggcacctttggtaagaccatattttgtgcc 519



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>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0076M06, complete sequence
          Length = 133581

 Score =  264 bits (133), Expect = 9e-67
 Identities = 298/353 (84%)
 Strand = Plus / Plus

                                                                         
Query: 135   gcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcgccgacgcggcgcag 194
             |||||||| || ||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 93269 gcgcagttcgccggagtggacgcctacggcctgatcaagatgatcgccgaggcggcgcag 93328

                                                                         
Query: 195   acggtccggaggaacagagccacctgcctgcagctcgcgcgccgcgccaggatgatcggg 254
             ||||| ||| | ||||| || || ||||||||||||||||| |||  || ||||||||| 
Sbjct: 93329 acggtgcggcgcaacagggcgacgtgcctgcagctcgcgcggcgcctcaagatgatcgga 93388

                                                                         
Query: 255   gacctgatgcaccagctccacgccgcgcacctcatgcagcaaccggagacgaggaacccc 314
             || ||  |  | ||||||||||  ||||| || |||||||| ||||||||||||||||| 
Sbjct: 93389 gatcttctcaagcagctccacggtgcgcagctgatgcagcagccggagacgaggaacccg 93448

                                                                         
Query: 315   atggagcagctggaggagacgctccggcgcgcgctgtcgctcgtcaggtcctgccagcgc 374
              |||||||||||||||||||||||||||| |||     ||||||| |||| |||||| ||
Sbjct: 93449 gtggagcagctggaggagacgctccggcgagcgtacctgctcgtccggtcatgccagggc 93508

                                                                         
Query: 375   cgcgggtacctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtg 434
             ||  | ||| | ||||| ||||||||||| |  |||||||||||||||||| | || |||
Sbjct: 93509 cggagctacgtgtaccgctgcttcatgggaggccggcacgccgacgagctcagggaagtg 93568

                                                                  
Query: 435   cagggtgagatcaccttctacctccagcttttccctctcctcagctacgtcga 487
             ||| |||||||| |||||||||||||||| ||||||||| ||||||| |||||
Sbjct: 93569 cagagtgagatcgccttctacctccagctcttccctctcgtcagctatgtcga 93621



 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                         
Query: 421   agctccgcgaggtgcagggtgagatcaccttctacctccagcttttccctctcctcagct 480
             |||| |||||||||||| |||| |||||||||||||||||||| ||||||||  ||||||
Sbjct: 16163 agctgcgcgaggtgcagagtgatatcaccttctacctccagctcttccctcttgtcagct 16222

                                     
Query: 481   acgtcgacaccaccctcacctggg 504
              ||| ||||| ||||  |||||||
Sbjct: 16223 tcgttgacacgacccgtacctggg 16246



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 303   acgaggaaccccatggagcagctggaggagacgctccg 340
             |||||||||||  |||||||||||||||||||||||||
Sbjct: 16045 acgaggaacccggtggagcagctggaggagacgctccg 16082



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                              
Query: 566   acaggcacctgtggtaagaccatattttgtgcc 598
             |||||||||| ||||||||||||||||||||||
Sbjct: 93946 acaggcacctttggtaagaccatattttgtgcc 93978



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 423   ctccgcgaggtgcagggtgagatcaccttctacctccagcttttccc 469
             ||||||||||||||| |  |||||| | ||||||||||||| |||||
Sbjct: 87569 ctccgcgaggtgcagagcaagatcagcatctacctccagctcttccc 87615



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score =  264 bits (133), Expect = 9e-67
 Identities = 298/353 (84%)
 Strand = Plus / Plus

                                                                            
Query: 135      gcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcgccgacgcggcgcag 194
                |||||||| || ||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 26291620 gcgcagttcgccggagtggacgcctacggcctgatcaagatgatcgccgaggcggcgcag 26291679

                                                                            
Query: 195      acggtccggaggaacagagccacctgcctgcagctcgcgcgccgcgccaggatgatcggg 254
                ||||| ||| | ||||| || || ||||||||||||||||| |||  || ||||||||| 
Sbjct: 26291680 acggtgcggcgcaacagggcgacgtgcctgcagctcgcgcggcgcctcaagatgatcgga 26291739

                                                                            
Query: 255      gacctgatgcaccagctccacgccgcgcacctcatgcagcaaccggagacgaggaacccc 314
                || ||  |  | ||||||||||  ||||| || |||||||| ||||||||||||||||| 
Sbjct: 26291740 gatcttctcaagcagctccacggtgcgcagctgatgcagcagccggagacgaggaacccg 26291799

                                                                            
Query: 315      atggagcagctggaggagacgctccggcgcgcgctgtcgctcgtcaggtcctgccagcgc 374
                 |||||||||||||||||||||||||||| |||     ||||||| |||| |||||| ||
Sbjct: 26291800 gtggagcagctggaggagacgctccggcgagcgtacctgctcgtccggtcatgccagggc 26291859

                                                                            
Query: 375      cgcgggtacctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtg 434
                ||  | ||| | ||||| ||||||||||| |  |||||||||||||||||| | || |||
Sbjct: 26291860 cggagctacgtgtaccgctgcttcatgggaggccggcacgccgacgagctcagggaagtg 26291919

                                                                     
Query: 435      cagggtgagatcaccttctacctccagcttttccctctcctcagctacgtcga 487
                ||| |||||||| |||||||||||||||| ||||||||| ||||||| |||||
Sbjct: 26291920 cagagtgagatcgccttctacctccagctcttccctctcgtcagctatgtcga 26291972



 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                            
Query: 421      agctccgcgaggtgcagggtgagatcaccttctacctccagcttttccctctcctcagct 480
                |||| |||||||||||| |||| |||||||||||||||||||| ||||||||  ||||||
Sbjct: 26213288 agctgcgcgaggtgcagagtgatatcaccttctacctccagctcttccctcttgtcagct 26213347

                                        
Query: 481      acgtcgacaccaccctcacctggg 504
                 ||| ||||| ||||  |||||||
Sbjct: 26213348 tcgttgacacgacccgtacctggg 26213371



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 303      acgaggaaccccatggagcagctggaggagacgctccg 340
                |||||||||||  |||||||||||||||||||||||||
Sbjct: 26213170 acgaggaacccggtggagcagctggaggagacgctccg 26213207



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                 
Query: 566      acaggcacctgtggtaagaccatattttgtgcc 598
                |||||||||| ||||||||||||||||||||||
Sbjct: 26292297 acaggcacctttggtaagaccatattttgtgcc 26292329



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 423      ctccgcgaggtgcagggtgagatcaccttctacctccagcttttccc 469
                ||||||||||||||| |  |||||| | ||||||||||||| |||||
Sbjct: 26285920 ctccgcgaggtgcagagcaagatcagcatctacctccagctcttccc 26285966



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>dbj|AK066296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059O19, full
           insert sequence
          Length = 1830

 Score =  264 bits (133), Expect = 9e-67
 Identities = 298/353 (84%)
 Strand = Plus / Plus

                                                                       
Query: 135 gcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcgccgacgcggcgcag 194
           |||||||| || ||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 84  gcgcagttcgccggagtggacgcctacggcctgatcaagatgatcgccgaggcggcgcag 143

                                                                       
Query: 195 acggtccggaggaacagagccacctgcctgcagctcgcgcgccgcgccaggatgatcggg 254
           ||||| ||| | ||||| || || ||||||||||||||||| |||  || ||||||||| 
Sbjct: 144 acggtgcggcgcaacagggcgacgtgcctgcagctcgcgcggcgcctcaagatgatcgga 203

                                                                       
Query: 255 gacctgatgcaccagctccacgccgcgcacctcatgcagcaaccggagacgaggaacccc 314
           || ||  |  | ||||||||||  ||||| || |||||||| ||||||||||||||||| 
Sbjct: 204 gatcttctcaagcagctccacggtgcgcagctgatgcagcagccggagacgaggaacccg 263

                                                                       
Query: 315 atggagcagctggaggagacgctccggcgcgcgctgtcgctcgtcaggtcctgccagcgc 374
            |||||||||||||||||||||||||||| |||     ||||||| |||| |||||| ||
Sbjct: 264 gtggagcagctggaggagacgctccggcgagcgtacctgctcgtccggtcatgccagggc 323

                                                                       
Query: 375 cgcgggtacctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtg 434
           ||  | ||| | ||||| ||||||||||| |  |||||||||||||||||| | || |||
Sbjct: 324 cggagctacgtgtaccgctgcttcatgggaggccggcacgccgacgagctcagggaagtg 383

                                                                
Query: 435 cagggtgagatcaccttctacctccagcttttccctctcctcagctacgtcga 487
           ||| |||||||| |||||||||||||||| ||||||||| ||||||| |||||
Sbjct: 384 cagagtgagatcgccttctacctccagctcttccctctcgtcagctatgtcga 436



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 568 aggcacctgtggtaagaccatattttgtgcc 598
           |||||||| ||||||||||||||||||||||
Sbjct: 490 aggcacctttggtaagaccatattttgtgcc 520



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>emb|CT832795.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI023G16, full
           insert sequence
          Length = 993

 Score =  248 bits (125), Expect = 6e-62
 Identities = 297/353 (84%), Gaps = 1/353 (0%)
 Strand = Plus / Plus

                                                                       
Query: 135 gcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcgccgacgcggcgcag 194
           |||||||| || ||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 81  gcgcagttcgccggagtggacgcctacggcctgatcaagatgatcgccgaggcggcgcag 140

                                                                       
Query: 195 acggtccggaggaacagagccacctgcctgcagctcgcgcgccgcgccaggatgatcggg 254
           ||||| ||| | ||||| || || ||||||| ||||||||| |||  || ||||||||| 
Sbjct: 141 acggtgcggcgcaacagggcgacgtgcctgc-gctcgcgcggcgcctcaagatgatcgga 199

                                                                       
Query: 255 gacctgatgcaccagctccacgccgcgcacctcatgcagcaaccggagacgaggaacccc 314
           || ||  |  | ||||||||||  ||||| || |||||||| ||||||||||||||||| 
Sbjct: 200 gatcttctcaagcagctccacggtgcgcagctgatgcagcagccggagacgaggaacccg 259

                                                                       
Query: 315 atggagcagctggaggagacgctccggcgcgcgctgtcgctcgtcaggtcctgccagcgc 374
            |||||||||||||||||||||||||||| |||     ||||||| |||| |||||| ||
Sbjct: 260 gtggagcagctggaggagacgctccggcgagcgtacctgctcgtccggtcatgccagggc 319

                                                                       
Query: 375 cgcgggtacctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtg 434
           ||  | ||| | ||||| ||||||||||| |  |||||||||||||||||| | || |||
Sbjct: 320 cggagctacgtgtaccgctgcttcatgggaggccggcacgccgacgagctcagggaagtg 379

                                                                
Query: 435 cagggtgagatcaccttctacctccagcttttccctctcctcagctacgtcga 487
           ||| |||||||| |||||||||||||||| ||||||||| ||||||| |||||
Sbjct: 380 cagagtgagatcgccttctacctccagctcttccctctcgtcagctatgtcga 432



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 568 aggcacctgtggtaagaccatattttgtgcc 598
           |||||||| ||||||||||||||||||||||
Sbjct: 486 aggcacctttggtaagaccatattttgtgcc 516



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>gb|AY104794.1| Zea mays PCO093477 mRNA sequence
          Length = 1130

 Score =  117 bits (59), Expect = 1e-22
 Identities = 142/167 (85%), Gaps = 2/167 (1%)
 Strand = Plus / Plus

                                                                       
Query: 323 gctggaggagacgctccggcgcgcgctgtc-gctcgtcaggtcctgccagcgccgcgggt 381
           |||||||||||||||||||||||| ||  | ||| ||  ||||||||||||| |||||||
Sbjct: 292 gctggaggagacgctccggcgcgc-ctacctgctggtgcggtcctgccagcggcgcgggt 350

                                                                       
Query: 382 acctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtgcagggtg 441
           ||   | ||| ||| | ||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 351 acgcgttccgctgcctgatgggggcgcggcacgcggacgagctccgcgagatgcagggcg 410

                                                          
Query: 442 agatcaccttctacctccagcttttccctctcctcagctacgtcgac 488
           |||||  |||||||||| | || ||||| ||| ||||||||||||||
Sbjct: 411 agatcggcttctacctcgacctcttccccctcatcagctacgtcgac 457



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 165 ctcatcaagatgatcgccgacgcggcgcagacgg 198
           ||||||| ||||||||| || |||||||||||||
Sbjct: 116 ctcatcacgatgatcgcggaggcggcgcagacgg 149



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>ref|NM_001074960.1| Oryza sativa (japonica cultivar-group) Os11g0670100 (Os11g0670100)
           mRNA, complete cds
          Length = 6366

 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 421 agctccgcgaggtgcagggtgagatcaccttctacctccagcttttccctctcctcagct 480
           |||| |||||||||||| |||| |||||||||||||||||||| ||||||||  ||||||
Sbjct: 326 agctgcgcgaggtgcagagtgatatcaccttctacctccagctcttccctcttgtcagct 385

                                   
Query: 481 acgtcgacaccaccctcacctggg 504
            ||| ||||| ||||  |||||||
Sbjct: 386 tcgttgacacgacccgtacctggg 409



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 303 acgaggaaccccatggagcagctggaggagacgctccg 340
           |||||||||||  |||||||||||||||||||||||||
Sbjct: 208 acgaggaacccggtggagcagctggaggagacgctccg 245



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>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0002C14, complete sequence
          Length = 154029

 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                          
Query: 421    agctccgcgaggtgcagggtgagatcaccttctacctccagcttttccctctcctcagct 480
              |||| |||||||||||| |||| |||||||||||||||||||| ||||||||  ||||||
Sbjct: 118403 agctgcgcgaggtgcagagtgatatcaccttctacctccagctcttccctcttgtcagct 118462

                                      
Query: 481    acgtcgacaccaccctcacctggg 504
               ||| ||||| ||||  |||||||
Sbjct: 118463 tcgttgacacgacccgtacctggg 118486



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 303    acgaggaaccccatggagcagctggaggagacgctccg 340
              |||||||||||  |||||||||||||||||||||||||
Sbjct: 118285 acgaggaacccggtggagcagctggaggagacgctccg 118322



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>ref|XM_504217.1| Yarrowia lipolytica CLIB122, YALI0E21109g predicted mRNA
          Length = 1176

 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 522 cctgctcctgctcctcaacctact 545
           ||||||||||||||||||||||||
Sbjct: 139 cctgctcctgctcctcaacctact 162



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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 522     cctgctcctgctcctcaacctact 545
               ||||||||||||||||||||||||
Sbjct: 2511605 cctgctcctgctcctcaacctact 2511582



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>emb|CT831462.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124G13, full
           insert sequence
          Length = 1960

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 423 ctccgcgaggtgcagggtgagatcaccttctacctccagcttttccc 469
           ||||||||||||||| |  |||||| | ||||||||||||| |||||
Sbjct: 425 ctccgcgaggtgcagagcaagatcagcatctacctccagctcttccc 471



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>gb|AC004629.1| Homo sapiens chromosome 5, BAC clone 87L18 (LBNL H97), complete sequence
          Length = 116019

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 1203   tgcatgcccccttcacatggtgc 1225
              |||||||||||||||||||||||
Sbjct: 109782 tgcatgcccccttcacatggtgc 109804



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 167     catcaagatgatcgccgacgcgg 189
               |||||||||||||||||||||||
Sbjct: 3277219 catcaagatgatcgccgacgcgg 3277241



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 167    catcaagatgatcgccgacgcgg 189
              |||||||||||||||||||||||
Sbjct: 735585 catcaagatgatcgccgacgcgg 735607



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>gb|AC106781.2| Homo sapiens chromosome 5 clone RP11-346A9, complete sequence
          Length = 179284

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 1203  tgcatgcccccttcacatggtgc 1225
             |||||||||||||||||||||||
Sbjct: 11238 tgcatgcccccttcacatggtgc 11216



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 167    catcaagatgatcgccgacgcgg 189
              |||||||||||||||||||||||
Sbjct: 544207 catcaagatgatcgccgacgcgg 544229



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 167    catcaagatgatcgccgacgcgg 189
              |||||||||||||||||||||||
Sbjct: 498396 catcaagatgatcgccgacgcgg 498418



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>gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromosome unknown, complete
              sequence
          Length = 227692

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 1292   tcatctacataaacaaagcttcaacct 1318
              |||||||||||||||||||||| ||||
Sbjct: 197193 tcatctacataaacaaagcttctacct 197219



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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 164     gctcatcaagatgatcgccgacgcgg 189
               |||||| |||||||||||||||||||
Sbjct: 2323658 gctcatgaagatgatcgccgacgcgg 2323683



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 687      aataattcattttggcaaaatt 708
                ||||||||||||||||||||||
Sbjct: 25149410 aataattcattttggcaaaatt 25149389



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>ref|XM_684855.1| PREDICTED: Danio rerio similar to HBxAg transactivated protein 2
            (LOC561451), partial mRNA
          Length = 3315

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 313  ccatggagcagctggaggagacgctc 338
            |||||||||||| |||||||||||||
Sbjct: 2258 ccatggagcagccggaggagacgctc 2283



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>gb|AF329639.1|AF329639 Drosophila virilis hairy 5' cis-regulatory region sequence
          Length = 7119

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1143 aggcgcagtcgcagtcgcactcgcag 1168
            ||||||||||||||||||| ||||||
Sbjct: 3487 aggcgcagtcgcagtcgcagtcgcag 3462



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>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07,
             complete sequence
          Length = 130779

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 687   aataattcattttggcaaaatt 708
             ||||||||||||||||||||||
Sbjct: 31077 aataattcattttggcaaaatt 31056



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>gb|AY111044.1| Zea mays CL38592_1 mRNA sequence
          Length = 606

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  cgtcctcctcctcctcttggga 50
           ||||||||||||||||||||||
Sbjct: 487 cgtcctcctcctcctcttggga 508



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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
             complete sequence
          Length = 150187

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 687   aataattcattttggcaaaatt 708
             ||||||||||||||||||||||
Sbjct: 96837 aataattcattttggcaaaatt 96816



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>emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chromosome 15, complete
              sequence
          Length = 220050

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 448    ccttctacctccagcttttccctctcctca 477
              |||||| ||||||||||||||| |||||||
Sbjct: 168421 ccttctgcctccagcttttcccactcctca 168450



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>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm
          Length = 1367119

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 485     cgacaccaccctcacctgggt 505
               |||||||||||||||||||||
Sbjct: 1315285 cgacaccaccctcacctgggt 1315305



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>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome
          Length = 3483902

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 167     catcaagatgatcgccgacgc 187
               |||||||||||||||||||||
Sbjct: 3120395 catcaagatgatcgccgacgc 3120375



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>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence
          Length = 3556545

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 167     catcaagatgatcgccgacgc 187
               |||||||||||||||||||||
Sbjct: 3178114 catcaagatgatcgccgacgc 3178094



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>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 178     tcgccgacgcggcgcagacgg 198
               |||||||||||||||||||||
Sbjct: 3146424 tcgccgacgcggcgcagacgg 3146404



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>ref|XM_001058700.1| PREDICTED: Rattus norvegicus hypothetical protein LOC681852
          (LOC681852), mRNA
          Length = 348

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 29 cgtcctcctcctcctcttggg 49
          |||||||||||||||||||||
Sbjct: 85 cgtcctcctcctcctcttggg 65



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>gb|AC188111.1| Pongo pygmaeus abelii chromosome UNK clone CH276-78H12, complete sequence
          Length = 193610

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1323   tttctgaagaataggaggtga 1343
              |||||||||||||||||||||
Sbjct: 139683 tttctgaagaataggaggtga 139703



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>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence
          Length = 3294563

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 167     catcaagatgatcgccgacgc 187
               |||||||||||||||||||||
Sbjct: 2436037 catcaagatgatcgccgacgc 2436017



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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 167    catcaagatgatcgccgacgc 187
              |||||||||||||||||||||
Sbjct: 345417 catcaagatgatcgccgacgc 345437



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>gb|AC169385.2| Mus musculus BAC clone RP23-247C1 from chromosome 16, complete sequence
          Length = 206814

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1286   cctctctcatctacataaaca 1306
              |||||||||||||||||||||
Sbjct: 135771 cctctctcatctacataaaca 135791



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 167     catcaagatgatcgccgacgc 187
               |||||||||||||||||||||
Sbjct: 3297775 catcaagatgatcgccgacgc 3297755



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>gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome 18, complete sequence
          Length = 154520

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 552    aaagaggcacaggcacaggca 572
              |||||||||||||||||||||
Sbjct: 139621 aaagaggcacaggcacaggca 139601



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>gb|AC134570.5| Mus musculus BAC clone RP24-252B18 from chromosome 18, complete
             sequence
          Length = 183551

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 549   tgcaaagaggcacaggcacaggcac 573
             |||||| ||||||||||||||||||
Sbjct: 23462 tgcaaacaggcacaggcacaggcac 23438



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>gb|AC126255.3| Mus musculus BAC clone RP24-218F22 from chromosome 18, complete sequence
          Length = 166367

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 549    tgcaaagaggcacaggcacaggcac 573
              |||||| ||||||||||||||||||
Sbjct: 156001 tgcaaacaggcacaggcacaggcac 155977



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>gb|AC095558.10| Rattus norvegicus 18 BAC CH230-8D7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 226956

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 559    cacaggcacaggcacctgtgg 579
              |||||||||||||||||||||
Sbjct: 219254 cacaggcacaggcacctgtgg 219274



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>gb|AC091517.10| Homo sapiens 12 BAC RP11-777M1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172346

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 675    ttctcttcttgtaataattca 695
              |||||||||||||||||||||
Sbjct: 101159 ttctcttcttgtaataattca 101139



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>emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 in linkage group 8,
             complete sequence
          Length = 195545

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1517  agctacagatttacataaact 1537
             |||||||||||||||||||||
Sbjct: 32815 agctacagatttacataaact 32795



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 554      agaggcacaggcacaggcacc 574
                |||||||||||||||||||||
Sbjct: 24698457 agaggcacaggcacaggcacc 24698437



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>emb|AL592402.12| Human DNA sequence from clone RP11-554K11 on chromosome 1 Contains a
             processed pseudogene similar to ribosomal protein L31
             (RPL31), complete sequence
          Length = 200461

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1323  tttctgaagaataggaggtga 1343
             |||||||||||||||||||||
Sbjct: 86623 tttctgaagaataggaggtga 86603



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>ref|XM_688139.1| PREDICTED: Danio rerio similar to Jmjd2al protein (LOC564809), mRNA
          Length = 3789

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 522 cctgctcctgctcctcaacct 542
           |||||||||||||||||||||
Sbjct: 838 cctgctcctgctcctcaacct 818



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>gb|AC154606.2| Mus musculus BAC clone RP23-252E10 from chromosome 16, complete
             sequence
          Length = 181697

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1286  cctctctcatctacataaaca 1306
             |||||||||||||||||||||
Sbjct: 36629 cctctctcatctacataaaca 36649



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>gb|AC160932.3| Mus musculus BAC clone RP24-275L14 from chromosome 12, complete
             sequence
          Length = 177886

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1400  cagagcagatagaaaattaga 1420
             |||||||||||||||||||||
Sbjct: 32154 cagagcagatagaaaattaga 32134



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>gb|AC154474.2| Mus musculus BAC clone RP24-122P10 from chromosome 16, complete
             sequence
          Length = 223585

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1386  aatgatccaggcttcagagca 1406
             |||||||||||||||||||||
Sbjct: 86811 aatgatccaggcttcagagca 86831



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>emb|BX784028.13| Zebrafish DNA sequence from clone DKEY-40C11 in linkage group 5, complete
              sequence
          Length = 230525

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 522    cctgctcctgctcctcaacct 542
              |||||||||||||||||||||
Sbjct: 142278 cctgctcctgctcctcaacct 142258



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>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0040H10
          Length = 132919

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 554   agaggcacaggcacaggcacc 574
             |||||||||||||||||||||
Sbjct: 54394 agaggcacaggcacaggcacc 54374



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>ref|XM_950841.1| Neurospora crassa OR74A hypothetical protein (NCU05007.1) partial
            mRNA
          Length = 2001

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 456  ctccagcttttccctctcctc 476
            |||||||||||||||||||||
Sbjct: 1326 ctccagcttttccctctcctc 1306



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>emb|BX842598.1| Neurospora crassa DNA linkage group II BAC clone B8L10
          Length = 73541

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 456   ctccagcttttccctctcctc 476
             |||||||||||||||||||||
Sbjct: 46647 ctccagcttttccctctcctc 46667



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>gb|AY110926.1| Zea mays CL2322_1 mRNA sequence
          Length = 1495

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 24 acgtacgtcctcctcctcctc 44
          |||||||||||||||||||||
Sbjct: 64 acgtacgtcctcctcctcctc 44



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>gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, complete sequence
          Length = 196521

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1474   cttctgatcccaaagaaaccc 1494
              |||||||||||||||||||||
Sbjct: 124510 cttctgatcccaaagaaaccc 124530



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>gb|AC151409.2| Mus musculus BAC clone RP24-541K8 from 18, complete sequence
          Length = 179265

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 552   aaagaggcacaggcacaggca 572
             |||||||||||||||||||||
Sbjct: 34816 aaagaggcacaggcacaggca 34796



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>emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on chromosome 4, complete
             sequence
          Length = 193813

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1042  ttgtgtattattgtttgtttg 1062
             |||||||||||||||||||||
Sbjct: 21090 ttgtgtattattgtttgtttg 21110



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>gb|U04434.1|ZMFHT Zea mays flavanone 3-beta-hydroxylase (fht) mRNA, complete cds
          Length = 1523

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 24 acgtacgtcctcctcctcctc 44
          |||||||||||||||||||||
Sbjct: 64 acgtacgtcctcctcctcctc 44


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 311,247,082
Number of extensions: 18795358
Number of successful extensions: 750663
Number of sequences better than 10.0: 57
Number of HSP's gapped: 750649
Number of HSP's successfully gapped: 72
Length of query: 1706
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1683
Effective length of database: 18,503,978,556
Effective search space: 31142195909748
Effective search space used: 31142195909748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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