ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf2e19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001049201.1| Oryza sativa (japonica cultivar-group) Os01g... 559 e-156
2gb|BT017076.1| Zea mays clone EL01N0360A02.c mRNA sequence 523 e-145
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 238 4e-59
4dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic D... 238 4e-59
5dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 238 4e-59
6gb|AY110560.1| Zea mays CL11905_1 mRNA sequence 210 8e-51
7gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 48 0.071
8gb|AC118213.8| Mus musculus chromosome 1, clone RP24-529B23, com... 46 0.28
9ref|XM_762506.1| Giardia lamblia ATCC 50803 hypothetical protein... 46 0.28
10gb|AC115893.10| Mus musculus chromosome 1, clone RP24-442I13, co... 46 0.28
11gb|CP000454.1| Arthrobacter sp. FB24, complete genome 44 1.1
12gb|AY686596.1| Apis mellifera Dscam gene, complete cds, alternat... 44 1.1
13gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 44 1.1
14gb|AC008074.3| Homo sapiens BAC clone RP11-568N6 from 2, complet... 44 1.1
15emb|CR628337.1| Legionella pneumophila str. Lens complete genome 44 1.1
16emb|CR628336.1| Legionella pneumophila str. Paris complete genome 44 1.1
17gb|CP000479.1| Mycobacterium avium 104, complete genome 42 4.4
18ref|XM_507640.2| PREDICTED: Pan troglodytes F-box only protein, ... 42 4.4
19gb|DQ007884.1| Malus x domestica DELLA protein (RGL2b) mRNA, com... 42 4.4
20gb|CP000362.1| Roseobacter denitrificans OCh 114, complete genome 42 4.4
21ref|NM_112699.2| Arabidopsis thaliana unknown protein (AT3G18165... 42 4.4
22gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 42 4.4
23gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 42 4.4
24gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 42 4.4
25ref|XM_710037.1| Candida albicans SC5314 putative ubiquitin-like... 42 4.4
26ref|XM_709986.1| Candida albicans SC5314 putative ubiquitin-like... 42 4.4
27gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 42 4.4
28gb|AC109294.8| Mus musculus chromosome 1, clone RP24-236C22, com... 42 4.4
29gb|AC131804.4| Mus musculus BAC clone RP24-553C6 from chromosome... 42 4.4
30gb|CP000001.1| Bacillus cereus E33L, complete genome 42 4.4
31gb|AC110263.9| Mus musculus chromosome 3, clone RP23-296I12, com... 42 4.4
32gb|AY091412.1| Arabidopsis thaliana unknown protein (At3g18165) ... 42 4.4
33gb|AY050910.1| Arabidopsis thaliana unknown protein (At3g18165) ... 42 4.4
34emb|AL355580.13| Human DNA sequence from clone RP11-76K10 on chr... 42 4.4
35emb|AL137186.18| Human DNA sequence from clone RP11-536K7 on chr... 42 4.4
36dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 4.4
37gb|AY088112.1| Arabidopsis thaliana clone 41430 mRNA, complete s... 42 4.4
38gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 4.4
39dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 4.4
40dbj|AB020749.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 4.4
41gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, com... 42 4.4
42dbj|AP003783.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 4.4
43gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 42 4.4
44gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 42 4.4
45gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 4.4
46gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 42 4.4
47emb|AL953839.10| Mouse DNA sequence from clone RP23-325L22 on ch... 42 4.4
48gb|AC131737.3| Mus musculus BAC clone RP23-106E9 from 7, complet... 42 4.4
49emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on ch... 42 4.4

>ref|NM_001049201.1| Oryza sativa (japonica cultivar-group) Os01g0264800 (Os01g0264800)
           mRNA, complete cds
          Length = 588
 Score =  559 bits (282), Expect = e-156
 Identities = 450/506 (88%)
 Strand = Plus / Plus

                                                                       
Query: 111 tggcgcccgcctccggacgctgagacggtggacgcgctgccctacatcgacggggactac 170
           |||||| |||| |||||||| ||| | |||||||||||||||||||||||||| ||||||
Sbjct: 70  tggcgcgcgccgccggacgcggaggccgtggacgcgctgccctacatcgacggcgactac 129

                                                                       
Query: 171 ggcgacccggcggtgaagcgcgaggttgaccgcctcgtcgaggaggagatgcgccgcgct 230
           |||||||||||||||||||| ||||| |||||  | || |||||||||||||| ||||  
Sbjct: 130 ggcgacccggcggtgaagcgggaggtggaccggatggtggaggaggagatgcggcgcggg 189

                                                                       
Query: 231 caccgcaagcccgccgacttcctccgcgacctgcccccctatcccatcattggatttgag 290
             |||||||||||||||||||||||||||||| ||||||   |||  ||| || || |||
Sbjct: 190 agccgcaagcccgccgacttcctccgcgacctcccccccgtccccgccatcgggttcgag 249

                                                                       
Query: 291 aatcatcctatgcttgcaaaagagtacgaacgtgttagagctggcaagccacctgctacc 350
           ||||||||||||||||| ||||||||||| |||||||||||||| || || |||||||||
Sbjct: 250 aatcatcctatgcttgctaaagagtacgagcgtgttagagctgggaaacctcctgctacc 309

                                                                       
Query: 351 atagagatgtcccgctatggtttggagccacccccagcgaacaagaggaatgatgttgtt 410
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 310 atagagatgtcccgctatggtttggagccacccccagcgaacaagaggaatgatgttgct 369

                                                                       
Query: 411 gcttggaagcaggctttacggaatgcccagagccagctgcagcatcaaattgtacggatt 470
           || |||| ||||||| || | ||||| |||||||||||||| ||||||||  || |||| 
Sbjct: 370 gcatggaggcaggctctaagaaatgctcagagccagctgcaccatcaaatcataaggata 429

                                                                       
Query: 471 gagaatctggagcttatgctgaagcacggtgttgaggtttggaagctccagaacagaaaa 530
           |||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||| ||
Sbjct: 430 gagaatctggagcttatgctgaagtatggtgttgaggtttggaagcttcagaatagacaa 489

                                                                       
Query: 531 atggaatcagttttgtctaggacgcaaaaaatgacactggaatacaatgaaaagatagaa 590
           |||||||||||||||||||||| |||||| ||| |  | ||||||||||| |||||||||
Sbjct: 490 atggaatcagttttgtctaggatgcaaaagatggctgtcgaatacaatgagaagatagaa 549

                                     
Query: 591 actgtcaaccgtgagaggaaatttca 616
           ||||||||||| ||||||||||||||
Sbjct: 550 actgtcaaccgcgagaggaaatttca 575



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>gb|BT017076.1| Zea mays clone EL01N0360A02.c mRNA sequence
          Length = 1082

 Score =  523 bits (264), Expect = e-145
 Identities = 537/628 (85%)
 Strand = Plus / Plus

                                                                       
Query: 141 gacgcgctgccctacatcgacggggactacggcgacccggcggtgaagcgcgaggttgac 200
           ||||||||||||||||||||||| |||||||||||  ||||||||||||| ||||| || 
Sbjct: 199 gacgcgctgccctacatcgacggcgactacggcgatgcggcggtgaagcgggaggtcgat 258

                                                                       
Query: 201 cgcctcgtcgaggaggagatgcgccgcgctcaccgcaagcccgccgacttcctccgcgac 260
           |||||||||||||||||||||||||| |   | |||||||| || ||||||||||| |||
Sbjct: 259 cgcctcgtcgaggaggagatgcgccgagggaagcgcaagcctgcagacttcctccgggac 318

                                                                       
Query: 261 ctgcccccctatcccatcattggatttgagaatcatcctatgcttgcaaaagagtacgaa 320
           ||||||||   ||||| |   ||||| |||||||||||||||||||| ||||| || |||
Sbjct: 319 ctgccccctgttcccaccgccggattcgagaatcatcctatgcttgctaaagaatatgaa 378

                                                                       
Query: 321 cgtgttagagctggcaagccacctgctaccatagagatgtcccgctatggtttggagcca 380
           |||||||| |||||||| || |||  ||   |||| ||||| ||||||||||||||||||
Sbjct: 379 cgtgttagggctggcaaacctccttttatgctagatatgtctcgctatggtttggagcca 438

                                                                       
Query: 381 cccccagcgaacaagaggaatgatgttgttgcttggaagcaggctttacggaatgcccag 440
           || |||  ||||||||||||||||||||  ||||||| ||||||| |||||||||| |||
Sbjct: 439 cctccaatgaacaagaggaatgatgttggcgcttggaggcaggctctacggaatgctcag 498

                                                                       
Query: 441 agccagctgcagcatcaaattgtacggattgagaatctggagcttatgctgaagcacggt 500
           |||||| |||||||||||||| || |||| |||||||| ||||||||||||||  | || 
Sbjct: 499 agccagttgcagcatcaaattataaggatagagaatctcgagcttatgctgaaatatggc 558

                                                                       
Query: 501 gttgaggtttggaagctccagaacagaaaaatggaatcagttttgtctaggacgcaaaaa 560
           || || ||||||||||||||||||||| |||||||||||||| ||||||||| |||||| 
Sbjct: 559 gtagatgtttggaagctccagaacagacaaatggaatcagttctgtctaggatgcaaaag 618

                                                                       
Query: 561 atgacactggaatacaatgaaaagatagaaactgtcaaccgtgagaggaaatttcatcag 620
           ||| |  | ||||||||||||| |||||||| |||||| || |||||||| || || |||
Sbjct: 619 atggctgtagaatacaatgaaaggatagaaaatgtcaatcgagagaggaagttccaccag 678

                                                                       
Query: 621 caaaacaccggtggacaactccacgccttgacagtagaatggcaggaactgtgtcagaaa 680
           ||||| || || ||||| || || ||| ||| | | ||||||||||| |||||||| |||
Sbjct: 679 caaaatactggaggacagctgcatgccctgaaaatggaatggcaggagctgtgtcaaaaa 738

                                                                       
Query: 681 aacatagctattcaagctgcgtgtgttgatctgcagaatcaaattgatcagcttaaactg 740
           || ||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||||||| 
Sbjct: 739 aatatagctattcaggctgcttgtgttgacctgcagaatcatattgaccagcttaaactt 798

                                       
Query: 741 gaagctaaagaacagggaatgccaatgg 768
           ||||| ||||||| ||||||||| ||||
Sbjct: 799 gaagcaaaagaactgggaatgcccatgg 826



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  238 bits (120), Expect = 4e-59
 Identities = 159/172 (92%)
 Strand = Plus / Plus

                                                                           
Query: 289     agaatcatcctatgcttgcaaaagagtacgaacgtgttagagctggcaagccacctgcta 348
               ||||||||||||||||||| ||||||||||| |||||||||||||| || || |||||||
Sbjct: 9013545 agaatcatcctatgcttgctaaagagtacgagcgtgttagagctgggaaacctcctgcta 9013604

                                                                           
Query: 349     ccatagagatgtcccgctatggtttggagccacccccagcgaacaagaggaatgatgttg 408
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9013605 ccatagagatgtcccgctatggtttggagccacccccagcgaacaagaggaatgatgttg 9013664

                                                                   
Query: 409     ttgcttggaagcaggctttacggaatgcccagagccagctgcagcatcaaat 460
                ||| |||| ||||||| || | ||||| |||||||||||||| ||||||||
Sbjct: 9013665 ctgcatggaggcaggctctaagaaatgctcagagccagctgcaccatcaaat 9013716



 Score =  172 bits (87), Expect = 2e-39
 Identities = 141/159 (88%)
 Strand = Plus / Plus

                                                                           
Query: 111     tggcgcccgcctccggacgctgagacggtggacgcgctgccctacatcgacggggactac 170
               |||||| |||| |||||||| ||| | |||||||||||||||||||||||||| ||||||
Sbjct: 9012138 tggcgcgcgccgccggacgcggaggccgtggacgcgctgccctacatcgacggcgactac 9012197

                                                                           
Query: 171     ggcgacccggcggtgaagcgcgaggttgaccgcctcgtcgaggaggagatgcgccgcgct 230
               |||||||||||||||||||| ||||| |||||  | || |||||||||||||| ||||  
Sbjct: 9012198 ggcgacccggcggtgaagcgggaggtggaccggatggtggaggaggagatgcggcgcggg 9012257

                                                      
Query: 231     caccgcaagcccgccgacttcctccgcgacctgcccccc 269
                 |||||||||||||||||||||||||||||| ||||||
Sbjct: 9012258 agccgcaagcccgccgacttcctccgcgacctccccccc 9012296



 Score =  168 bits (85), Expect = 3e-38
 Identities = 124/137 (90%)
 Strand = Plus / Plus

                                                                           
Query: 616     atcagcaaaacaccggtggacaactccacgccttgacagtagaatggcaggaactgtgtc 675
               ||||||||||||| ||||| |||||||| ||||||||    ||||||||||| |||||||
Sbjct: 9014899 atcagcaaaacactggtggtcaactccatgccttgacgacggaatggcaggagctgtgtc 9014958

                                                                           
Query: 676     agaaaaacatagctattcaagctgcgtgtgttgatctgcagaatcaaattgatcagctta 735
               ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 9014959 agaaaaatatagctattcaagctgcatgtgttgatctgcagaatcagattgatcagctta 9015018

                                
Query: 736     aactggaagctaaagaa 752
               |||| | ||||||||||
Sbjct: 9015019 aacttggagctaaagaa 9015035



 Score =  123 bits (62), Expect = 1e-24
 Identities = 80/86 (93%)
 Strand = Plus / Plus

                                                                           
Query: 466     ggattgagaatctggagcttatgctgaagcacggtgttgaggtttggaagctccagaaca 525
               |||| |||||||||||||||||||||||| | |||||||||||||||||||| ||||| |
Sbjct: 9014341 ggatagagaatctggagcttatgctgaagtatggtgttgaggtttggaagcttcagaata 9014400

                                         
Query: 526     gaaaaatggaatcagttttgtctagg 551
               || |||||||||||||||||||||||
Sbjct: 9014401 gacaaatggaatcagttttgtctagg 9014426



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                              
Query: 570     gaatacaatgaaaagatagaaactgtcaaccgtgagaggaaatttca 616
               ||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 9014776 gaatacaatgagaagatagaaactgtcaaccgcgagaggaaatttca 9014822



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>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0453A06
          Length = 154378

 Score =  238 bits (120), Expect = 4e-59
 Identities = 159/172 (92%)
 Strand = Plus / Plus

                                                                          
Query: 289    agaatcatcctatgcttgcaaaagagtacgaacgtgttagagctggcaagccacctgcta 348
              ||||||||||||||||||| ||||||||||| |||||||||||||| || || |||||||
Sbjct: 121300 agaatcatcctatgcttgctaaagagtacgagcgtgttagagctgggaaacctcctgcta 121359

                                                                          
Query: 349    ccatagagatgtcccgctatggtttggagccacccccagcgaacaagaggaatgatgttg 408
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121360 ccatagagatgtcccgctatggtttggagccacccccagcgaacaagaggaatgatgttg 121419

                                                                  
Query: 409    ttgcttggaagcaggctttacggaatgcccagagccagctgcagcatcaaat 460
               ||| |||| ||||||| || | ||||| |||||||||||||| ||||||||
Sbjct: 121420 ctgcatggaggcaggctctaagaaatgctcagagccagctgcaccatcaaat 121471



 Score =  172 bits (87), Expect = 2e-39
 Identities = 141/159 (88%)
 Strand = Plus / Plus

                                                                          
Query: 111    tggcgcccgcctccggacgctgagacggtggacgcgctgccctacatcgacggggactac 170
              |||||| |||| |||||||| ||| | |||||||||||||||||||||||||| ||||||
Sbjct: 119893 tggcgcgcgccgccggacgcggaggccgtggacgcgctgccctacatcgacggcgactac 119952

                                                                          
Query: 171    ggcgacccggcggtgaagcgcgaggttgaccgcctcgtcgaggaggagatgcgccgcgct 230
              |||||||||||||||||||| ||||| |||||  | || |||||||||||||| ||||  
Sbjct: 119953 ggcgacccggcggtgaagcgggaggtggaccggatggtggaggaggagatgcggcgcggg 120012

                                                     
Query: 231    caccgcaagcccgccgacttcctccgcgacctgcccccc 269
                |||||||||||||||||||||||||||||| ||||||
Sbjct: 120013 agccgcaagcccgccgacttcctccgcgacctccccccc 120051



 Score =  168 bits (85), Expect = 3e-38
 Identities = 124/137 (90%)
 Strand = Plus / Plus

                                                                          
Query: 616    atcagcaaaacaccggtggacaactccacgccttgacagtagaatggcaggaactgtgtc 675
              ||||||||||||| ||||| |||||||| ||||||||    ||||||||||| |||||||
Sbjct: 122654 atcagcaaaacactggtggtcaactccatgccttgacgacggaatggcaggagctgtgtc 122713

                                                                          
Query: 676    agaaaaacatagctattcaagctgcgtgtgttgatctgcagaatcaaattgatcagctta 735
              ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 122714 agaaaaatatagctattcaagctgcatgtgttgatctgcagaatcagattgatcagctta 122773

                               
Query: 736    aactggaagctaaagaa 752
              |||| | ||||||||||
Sbjct: 122774 aacttggagctaaagaa 122790



 Score =  123 bits (62), Expect = 1e-24
 Identities = 80/86 (93%)
 Strand = Plus / Plus

                                                                          
Query: 466    ggattgagaatctggagcttatgctgaagcacggtgttgaggtttggaagctccagaaca 525
              |||| |||||||||||||||||||||||| | |||||||||||||||||||| ||||| |
Sbjct: 122096 ggatagagaatctggagcttatgctgaagtatggtgttgaggtttggaagcttcagaata 122155

                                        
Query: 526    gaaaaatggaatcagttttgtctagg 551
              || |||||||||||||||||||||||
Sbjct: 122156 gacaaatggaatcagttttgtctagg 122181



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                             
Query: 570    gaatacaatgaaaagatagaaactgtcaaccgtgagaggaaatttca 616
              ||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 122531 gaatacaatgagaagatagaaactgtcaaccgcgagaggaaatttca 122577



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>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0499C11
          Length = 151369

 Score =  238 bits (120), Expect = 4e-59
 Identities = 159/172 (92%)
 Strand = Plus / Plus

                                                                         
Query: 289   agaatcatcctatgcttgcaaaagagtacgaacgtgttagagctggcaagccacctgcta 348
             ||||||||||||||||||| ||||||||||| |||||||||||||| || || |||||||
Sbjct: 42552 agaatcatcctatgcttgctaaagagtacgagcgtgttagagctgggaaacctcctgcta 42611

                                                                         
Query: 349   ccatagagatgtcccgctatggtttggagccacccccagcgaacaagaggaatgatgttg 408
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42612 ccatagagatgtcccgctatggtttggagccacccccagcgaacaagaggaatgatgttg 42671

                                                                 
Query: 409   ttgcttggaagcaggctttacggaatgcccagagccagctgcagcatcaaat 460
              ||| |||| ||||||| || | ||||| |||||||||||||| ||||||||
Sbjct: 42672 ctgcatggaggcaggctctaagaaatgctcagagccagctgcaccatcaaat 42723



 Score =  172 bits (87), Expect = 2e-39
 Identities = 141/159 (88%)
 Strand = Plus / Plus

                                                                         
Query: 111   tggcgcccgcctccggacgctgagacggtggacgcgctgccctacatcgacggggactac 170
             |||||| |||| |||||||| ||| | |||||||||||||||||||||||||| ||||||
Sbjct: 41145 tggcgcgcgccgccggacgcggaggccgtggacgcgctgccctacatcgacggcgactac 41204

                                                                         
Query: 171   ggcgacccggcggtgaagcgcgaggttgaccgcctcgtcgaggaggagatgcgccgcgct 230
             |||||||||||||||||||| ||||| |||||  | || |||||||||||||| ||||  
Sbjct: 41205 ggcgacccggcggtgaagcgggaggtggaccggatggtggaggaggagatgcggcgcggg 41264

                                                    
Query: 231   caccgcaagcccgccgacttcctccgcgacctgcccccc 269
               |||||||||||||||||||||||||||||| ||||||
Sbjct: 41265 agccgcaagcccgccgacttcctccgcgacctccccccc 41303



 Score =  168 bits (85), Expect = 3e-38
 Identities = 124/137 (90%)
 Strand = Plus / Plus

                                                                         
Query: 616   atcagcaaaacaccggtggacaactccacgccttgacagtagaatggcaggaactgtgtc 675
             ||||||||||||| ||||| |||||||| ||||||||    ||||||||||| |||||||
Sbjct: 43906 atcagcaaaacactggtggtcaactccatgccttgacgacggaatggcaggagctgtgtc 43965

                                                                         
Query: 676   agaaaaacatagctattcaagctgcgtgtgttgatctgcagaatcaaattgatcagctta 735
             ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 43966 agaaaaatatagctattcaagctgcatgtgttgatctgcagaatcagattgatcagctta 44025

                              
Query: 736   aactggaagctaaagaa 752
             |||| | ||||||||||
Sbjct: 44026 aacttggagctaaagaa 44042



 Score =  123 bits (62), Expect = 1e-24
 Identities = 80/86 (93%)
 Strand = Plus / Plus

                                                                         
Query: 466   ggattgagaatctggagcttatgctgaagcacggtgttgaggtttggaagctccagaaca 525
             |||| |||||||||||||||||||||||| | |||||||||||||||||||| ||||| |
Sbjct: 43348 ggatagagaatctggagcttatgctgaagtatggtgttgaggtttggaagcttcagaata 43407

                                       
Query: 526   gaaaaatggaatcagttttgtctagg 551
             || |||||||||||||||||||||||
Sbjct: 43408 gacaaatggaatcagttttgtctagg 43433



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                            
Query: 570   gaatacaatgaaaagatagaaactgtcaaccgtgagaggaaatttca 616
             ||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 43783 gaatacaatgagaagatagaaactgtcaaccgcgagaggaaatttca 43829



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>gb|AY110560.1| Zea mays CL11905_1 mRNA sequence
          Length = 1065

 Score =  210 bits (106), Expect = 8e-51
 Identities = 252/303 (83%)
 Strand = Plus / Minus

                                                                       
Query: 466 ggattgagaatctggagcttatgctgaagcacggtgttgaggtttggaagctccagaaca 525
           |||| |||||||| ||||||||||||||  | || || || |||||||||||||||||||
Sbjct: 636 ggatagagaatctcgagcttatgctgaaatatggcgtagatgtttggaagctccagaaca 577

                                                                       
Query: 526 gaaaaatggaatcagttttgtctaggacgcaaaaaatgacactggaatacaatgaaaaga 585
           || |||||||||||||| ||||||||| |||||| ||| |  | ||||||||||||| ||
Sbjct: 576 gacaaatggaatcagttctgtctaggatgcaaaagatggctgtagaatacaatgaaagga 517

                                                                       
Query: 586 tagaaactgtcaaccgtgagaggaaatttcatcagcaaaacaccggtggacaactccacg 645
           |||||| |||||| || |||||||| || || |||||||| || || ||||| || || |
Sbjct: 516 tagaaaatgtcaatcgagagaggaagttccaccagcaaaatactggaggacagctgcatg 457

                                                                       
Query: 646 ccttgacagtagaatggcaggaactgtgtcagaaaaacatagctattcaagctgcgtgtg 705
           || ||| | | ||||||||||| |||||||        ||||||||||| ||||| ||||
Sbjct: 456 ccctgaaaatggaatggcaggagctgtgtcnnnnnnntatagctattcaggctgcttgtg 397

                                                                       
Query: 706 ttgatctgcagaatcaaattgatcagcttaaactggaagctaaagaacagggaatgccaa 765
           |||| ||||||||||| ||||| ||||||||||| ||||| ||||||| ||||||||| |
Sbjct: 396 ttgacctgcagaatcatattgaccagcttaaacttgaagcaaaagaactgggaatgccca 337

              
Query: 766 tgg 768
           |||
Sbjct: 336 tgg 334



 Score =  202 bits (102), Expect = 2e-48
 Identities = 232/277 (83%)
 Strand = Plus / Minus

                                                                       
Query: 141 gacgcgctgccctacatcgacggggactacggcgacccggcggtgaagcgcgaggttgac 200
           ||||||||||||||||||||||| |||||||||||  ||||||||||||| ||||| || 
Sbjct: 961 gacgcgctgccctacatcgacggcgactacggcgatgcggcggtgaagcgggaggtcgat 902

                                                                       
Query: 201 cgcctcgtcgaggaggagatgcgccgcgctcaccgcaagcccgccgacttcctccgcgac 260
           |||||||||||||||||||||||||| |   | |||||||| || ||||||||||| |||
Sbjct: 901 cgcctcgtcgaggaggagatgcgccgagggaagcgcaagcctgcagacttcctccgggac 842

                                                                       
Query: 261 ctgcccccctatcccatcattggatttgagaatcatcctatgcttgcaaaagagtacgaa 320
           |||        ||||| |   ||||| |||||||||||||||||||| ||||| || |||
Sbjct: 841 ctgnnnnntgttcccaccgccggattcgagaatcatcctatgcttgctaaagaatatgaa 782

                                                                       
Query: 321 cgtgttagagctggcaagccacctgctaccatagagatgtcccgctatggtttggagcca 380
           |||||||| |||||||| || |||  ||   |||| ||||| ||||||||||||||||||
Sbjct: 781 cgtgttagggctggcaaacctccttttatgctagatatgtctcgctatggtttggagcca 722

                                                
Query: 381 cccccagcgaacaagaggaatgatgttgttgcttgga 417
           || |||  ||||||||||||||||||||  |||||||
Sbjct: 721 cctccaatgaacaagaggaatgatgttggcgcttgga 685



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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 48.1 bits (24), Expect = 0.071
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 202     gcctcgtcgaggaggagatgcgccgcgctcac 233
               |||||||||| ||||||||| |||||||||||
Sbjct: 2003002 gcctcgtcgacgaggagatgtgccgcgctcac 2003033



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>gb|AC118213.8| Mus musculus chromosome 1, clone RP24-529B23, complete sequence
          Length = 133485

 Score = 46.1 bits (23), Expect = 0.28
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 822    gtaggaaggcagaagctgtgact 844
              |||||||||||||||||||||||
Sbjct: 121655 gtaggaaggcagaagctgtgact 121677



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>ref|XM_762506.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_442_21022_14681)
            partial mRNA
          Length = 6342

 Score = 46.1 bits (23), Expect = 0.28
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 517  tccagaacagaaaaatggaatcagttttgtc 547
            |||||| || |||||||||||||||||||||
Sbjct: 5523 tccagagcataaaaatggaatcagttttgtc 5493



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>gb|AC115893.10| Mus musculus chromosome 1, clone RP24-442I13, complete sequence
          Length = 153053

 Score = 46.1 bits (23), Expect = 0.28
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 822    gtaggaaggcagaagctgtgact 844
              |||||||||||||||||||||||
Sbjct: 139924 gtaggaaggcagaagctgtgact 139902



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>gb|CP000454.1| Arthrobacter sp. FB24, complete genome
          Length = 4698945

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 113     gcgcccgcctccggacgctgag 134
               ||||||||||||||||||||||
Sbjct: 1035883 gcgcccgcctccggacgctgag 1035862



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>gb|AY686596.1| Apis mellifera Dscam gene, complete cds, alternatively spliced
          Length = 116066

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1110  tgaatattttgtctatttagtt 1131
             ||||||||||||||||||||||
Sbjct: 67724 tgaatattttgtctatttagtt 67703



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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 331     ctggcaagccacctgctaccat 352
               ||||||||||||||||||||||
Sbjct: 1919704 ctggcaagccacctgctaccat 1919683



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>gb|AC008074.3| Homo sapiens BAC clone RP11-568N6 from 2, complete sequence
          Length = 198087

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 524   cagaaaaatggaatcagttttg 545
             ||||||||||||||||||||||
Sbjct: 67205 cagaaaaatggaatcagttttg 67184



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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 331     ctggcaagccacctgctaccat 352
               ||||||||||||||||||||||
Sbjct: 1880364 ctggcaagccacctgctaccat 1880343



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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 331     ctggcaagccacctgctaccat 352
               ||||||||||||||||||||||
Sbjct: 1897697 ctggcaagccacctgctaccat 1897676



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>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 152     ctacatcgacggggactacggcgac 176
               ||||| |||||||||||||||||||
Sbjct: 3767347 ctacaccgacggggactacggcgac 3767323



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>ref|XM_507640.2| PREDICTED: Pan troglodytes F-box only protein, helicase, 18
           (FBXO18), mRNA
          Length = 3774

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 239 gcccgccgacttcctccgcga 259
           |||||||||||||||||||||
Sbjct: 438 gcccgccgacttcctccgcga 418



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>gb|DQ007884.1| Malus x domestica DELLA protein (RGL2b) mRNA, complete cds
          Length = 1755

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 939  tatgcaacgtgatggcatgtg 959
            |||||||||||||||||||||
Sbjct: 1490 tatgcaacgtgatggcatgtg 1510



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>gb|CP000362.1| Roseobacter denitrificans OCh 114, complete genome
          Length = 4133097

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 30      gcggccgccgtgatggccttg 50
               |||||||||||||||||||||
Sbjct: 1248210 gcggccgccgtgatggccttg 1248230



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>ref|NM_112699.2| Arabidopsis thaliana unknown protein (AT3G18165) mRNA, complete cds
          Length = 1118

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 309 aaagagtacgaacgtgttagagctggcaagccacctg 345
           |||||||| || |||||||||||||| ||||| ||||
Sbjct: 319 aaagagtatgagcgtgttagagctgggaagcctcctg 355



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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 678     aaaaacatagctattcaagct 698
               |||||||||||||||||||||
Sbjct: 1321652 aaaaacatagctattcaagct 1321632



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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1107   agctgaatattttgtctatttagtt 1131
              ||||||||||||||| |||||||||
Sbjct: 714260 agctgaatattttgtatatttagtt 714284



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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1107   agctgaatattttgtctatttagtt 1131
              ||||||||||||||| |||||||||
Sbjct: 723368 agctgaatattttgtatatttagtt 723392



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>ref|XM_710037.1| Candida albicans SC5314 putative ubiquitin-like protein-specific
            protease (CaO19.4353), mRNA
          Length = 1476

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 510  tggaagctccagaacagaaaaatgg 534
            ||||||||||| |||||||||||||
Sbjct: 1313 tggaagctccacaacagaaaaatgg 1337



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>ref|XM_709986.1| Candida albicans SC5314 putative ubiquitin-like protein-specific
            protease (CaO19.11831), mRNA
          Length = 1470

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 510  tggaagctccagaacagaaaaatgg 534
            ||||||||||| |||||||||||||
Sbjct: 1307 tggaagctccacaacagaaaaatgg 1331



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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1107   agctgaatattttgtctatttagtt 1131
              ||||||||||||||| |||||||||
Sbjct: 723263 agctgaatattttgtatatttagtt 723287



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>gb|AC109294.8| Mus musculus chromosome 1, clone RP24-236C22, complete sequence
          Length = 151772

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 827    aaggcagaagctgtgactcca 847
              |||||||||||||||||||||
Sbjct: 140093 aaggcagaagctgtgactcca 140073



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>gb|AC131804.4| Mus musculus BAC clone RP24-553C6 from chromosome 1, complete sequence
          Length = 138699

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 827   aaggcagaagctgtgactcca 847
             |||||||||||||||||||||
Sbjct: 52082 aaggcagaagctgtgactcca 52062



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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1107   agctgaatattttgtctatttagtt 1131
              ||||||||||||||| |||||||||
Sbjct: 713272 agctgaatattttgtatatttagtt 713296



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>gb|AC110263.9| Mus musculus chromosome 3, clone RP23-296I12, complete sequence
          Length = 201908

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 807    atttgagatgcagatgtagga 827
              |||||||||||||||||||||
Sbjct: 165921 atttgagatgcagatgtagga 165901



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>gb|AY091412.1| Arabidopsis thaliana unknown protein (At3g18165) mRNA, complete cds
          Length = 793

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 309 aaagagtacgaacgtgttagagctggcaagccacctg 345
           |||||||| || |||||||||||||| ||||| ||||
Sbjct: 259 aaagagtatgagcgtgttagagctgggaagcctcctg 295



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>gb|AY050910.1| Arabidopsis thaliana unknown protein (At3g18165) mRNA, complete cds
          Length = 1084

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 309 aaagagtacgaacgtgttagagctggcaagccacctg 345
           |||||||| || |||||||||||||| ||||| ||||
Sbjct: 320 aaagagtatgagcgtgttagagctgggaagcctcctg 356



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>emb|AL355580.13| Human DNA sequence from clone RP11-76K10 on chromosome 13 Contains the 3'
              end of a novel gene, complete sequence
          Length = 179497

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 559    aaatgacactggaatacaatgaaaa 583
              |||||| ||||||||||||||||||
Sbjct: 123692 aaatgaaactggaatacaatgaaaa 123668



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>emb|AL137186.18| Human DNA sequence from clone RP11-536K7 on chromosome 10 Contains the
             5' end of a novel gene, the FBXO18 gene for likely
             ortholog of mouse f-box only protein 18 (FBH1,FLJ14590),
             the IL15RA gene for interleukin 15 receptor, alpha
             (IL15RA), the 3' end of the IL2RA gene for interleukin 2
             receptor, alpha (CD25,IL2R,TCGFR), two novel genes and two
             CpG islands, complete sequence
          Length = 191607

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 239   gcccgccgacttcctccgcga 259
             |||||||||||||||||||||
Sbjct: 23931 gcccgccgacttcctccgcga 23911



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 187     agcgcgaggttgaccgcctcg 207
               |||||||||||||||||||||
Sbjct: 7010770 agcgcgaggttgaccgcctcg 7010750



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>gb|AY088112.1| Arabidopsis thaliana clone 41430 mRNA, complete sequence
          Length = 1093

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 309 aaagagtacgaacgtgttagagctggcaagccacctg 345
           |||||||| || |||||||||||||| ||||| ||||
Sbjct: 303 aaagagtatgagcgtgttagagctgggaagcctcctg 339



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 17     tacctgctcgcgcgcggccgc 37
              |||||||||||||||||||||
Sbjct: 845102 tacctgctcgcgcgcggccgc 845082



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 12      gcggctacctgctcgcgcgcggccgccgt 40
               ||||| |||||||||||| ||||||||||
Sbjct: 5381661 gcggccacctgctcgcgctcggccgccgt 5381689



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>dbj|AB020749.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRC8
          Length = 76816

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 309   aaagagtacgaacgtgttagagctggcaagccacctg 345
             |||||||| || |||||||||||||| ||||| ||||
Sbjct: 52937 aaagagtatgagcgtgttagagctgggaagcctcctg 52973



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>gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, complete sequence
          Length = 226125

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 807    atttgagatgcagatgtagga 827
              |||||||||||||||||||||
Sbjct: 196894 atttgagatgcagatgtagga 196914



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>dbj|AP003783.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-598K3, complete
              sequence
          Length = 172763

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1122   ctatttagttctgcttgtttc 1142
              |||||||||||||||||||||
Sbjct: 162100 ctatttagttctgcttgtttc 162120



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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1107   agctgaatattttgtctatttagtt 1131
              ||||||||||||||| |||||||||
Sbjct: 698696 agctgaatattttgtatatttagtt 698720



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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1107   agctgaatattttgtctatttagtt 1131
              ||||||||||||||| |||||||||
Sbjct: 723367 agctgaatattttgtatatttagtt 723391



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 152     ctacatcgacggggactacggcgac 176
               ||||| |||||||||||||||||||
Sbjct: 3187070 ctacaccgacggggactacggcgac 3187046



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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1107   agctgaatattttgtctatttagtt 1131
              ||||||||||||||| |||||||||
Sbjct: 798424 agctgaatattttgtatatttagtt 798448



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>emb|AL953839.10| Mouse DNA sequence from clone RP23-325L22 on chromosome 4, complete
             sequence
          Length = 80682

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 483   cttatgctgaagcacggtgtt 503
             |||||||||||||||||||||
Sbjct: 62326 cttatgctgaagcacggtgtt 62306



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>gb|AC131737.3| Mus musculus BAC clone RP23-106E9 from 7, complete sequence
          Length = 205306

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1013  agagaaagagaaccagaatgt 1033
             |||||||||||||||||||||
Sbjct: 58615 agagaaagagaaccagaatgt 58635



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>emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on chromosome X, complete
              sequence
          Length = 216244

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1117   tttgtctatttagttctgctt 1137
              |||||||||||||||||||||
Sbjct: 213032 tttgtctatttagttctgctt 213012


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 201,499,633
Number of extensions: 10769162
Number of successful extensions: 213876
Number of sequences better than 10.0: 49
Number of HSP's gapped: 213863
Number of HSP's successfully gapped: 64
Length of query: 1158
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1135
Effective length of database: 18,503,978,556
Effective search space: 21002015661060
Effective search space used: 21002015661060
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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