ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5b13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK067317:Os07g0572400 | 120 | 1e-27 | 2 | AK120337:Os03g0806800 | 89 | 4e-18 | 3 | AK061623:Os03g0806800 | 89 | 4e-18 | 4 | Os07g0204400:Os07g0204400 | 83 | 3e-16 | 5 | AK103002:Os03g0762500 | 37 | 0.017 | 6 | AK107076:Os04g0603400 | 36 | 0.029 | 7 | AK108203:Os08g0241300 | 35 | 0.049 | 8 | AK066494:Os03g0206400 | 35 | 0.049 | 9 | AK068990:Os01g0140100 | 32 | 0.55 | 10 | AK120814:Os05g0138000 | 32 | 0.71 | 11 | AK119848: | 31 | 0.93 | 12 | AK108206:Os07g0115500 | 31 | 0.93 | 13 | AK112065:Os08g0285200 | 30 | 1.6 | 14 | AK100927:Os07g0446100 | 29 | 3.5 | 15 | AK109930: | 29 | 4.6 | 16 | AK063489:Os01g0357400 | 29 | 4.6 | 17 | AY098743:Os03g0793700 | 28 | 6.0 | 18 | AK121667:Os03g0793700 | 28 | 6.0 | 19 | AK102839:Os07g0668200 | 28 | 6.0 | 20 | AK101682:Os07g0668200 | 28 | 6.0 | 21 | AK059051:Os07g0668200 | 28 | 6.0 | 22 | Os02g0720400:Os02g0720400 | 28 | 7.9 | 23 | AK107011:Os03g0206400 | 28 | 7.9 | 24 | AK063135:Os01g0288200 | 28 | 7.9 | 25 | AK072462:Os08g0508700 | 28 | 7.9 | 26 | AK099773:Os04g0122000 | 26 | 9.4 | 27 | AK065510:Os04g0122000 | 26 | 9.4 |
|---|
>AK067317:Os07g0572400 | Length = 90 Score = 120 bits (301), Expect = 1e-27 Identities = 59/85 (69%), Positives = 68/85 (80%), Gaps = 8/85 (9%) Frame = +3 Query: 135 STSSRGRELRVSSFMGWLRSLMAPIKKLWIRVHSAQKKKRGIYILYEDVKSCPCEDVQIL 314 ++ RGR + V+ MGWL+SL+AP+KKLWIR+HSAQ+KKRGIYILYEDVKSCPCEDVQIL Sbjct: 6 NSGCRGRRVVVAGTMGWLQSLLAPLKKLWIRMHSAQRKKRGIYILYEDVKSCPCEDVQIL 65 Query: 315 WSILVES--------HPPPTLRLKQ 365 WSILVES H P LRLKQ Sbjct: 66 WSILVESSHGGGHHHHHPQPLRLKQ 90
>AK120337:Os03g0806800 | Length = 64 Score = 89.0 bits (219), Expect = 4e-18 Identities = 37/59 (62%), Positives = 49/59 (83%) Frame = +3 Query: 177 MGWLRSLMAPIKKLWIRVHSAQKKKRGIYILYEDVKSCPCEDVQILWSILVESHPPPTL 353 MGWL SL +P++KLW+R HSA++ +RG++ILY+DVKSC EDV +LWSILV+SH P L Sbjct: 1 MGWLHSLFSPLRKLWVRAHSARRNRRGMHILYKDVKSCQDEDVHVLWSILVDSHRHPAL 59
>AK061623:Os03g0806800 | Length = 64 Score = 89.0 bits (219), Expect = 4e-18 Identities = 37/59 (62%), Positives = 49/59 (83%) Frame = +3 Query: 177 MGWLRSLMAPIKKLWIRVHSAQKKKRGIYILYEDVKSCPCEDVQILWSILVESHPPPTL 353 MGWL SL +P++KLW+R HSA++ +RG++ILY+DVKSC EDV +LWSILV+SH P L Sbjct: 1 MGWLHSLFSPLRKLWVRAHSARRNRRGMHILYKDVKSCQDEDVHVLWSILVDSHRHPAL 59
>Os07g0204400:Os07g0204400 | Length = 64 Score = 82.8 bits (203), Expect = 3e-16 Identities = 33/59 (55%), Positives = 47/59 (79%) Frame = +3 Query: 177 MGWLRSLMAPIKKLWIRVHSAQKKKRGIYILYEDVKSCPCEDVQILWSILVESHPPPTL 353 MGWL SL +P+++LW+ HS ++ +RG+YILY+DV+SC EDV +LWSIL++SH P L Sbjct: 1 MGWLHSLFSPLRRLWVCAHSERRNRRGMYILYKDVQSCQDEDVHVLWSILIDSHRHPAL 59
>AK103002:Os03g0762500 | Length = 94 Score = 37.0 bits (84), Expect = 0.017 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%) Frame = +3 Query: 204 PIKKLWIRVHSAQKKKR--GIYILYEDVKSCPCEDVQILWSILVESHPPPTLRLKQ*LTD 377 P+K++W+ + + +R G+ L ++V++C DV I+W +L ++ P + K+ Sbjct: 9 PVKRVWLGLAARLGLRRTSGLGKLKKEVRTCEYHDVHIMWEMLRKTDAPVPMAEKEAAAA 68 Query: 378 RPVPAA--VRRSSTALRR 425 V AA RR A RR Sbjct: 69 AAVAAAAGARRRKAAWRR 86
>AK107076:Os04g0603400 | Length = 92 Score = 36.2 bits (82), Expect = 0.029 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 8/86 (9%) Frame = +3 Query: 183 WLRSLMAPIKKLWIRVHSAQKKKR-----GIYILYEDVKSCPCEDVQILWSIL---VESH 338 W + ++ P ++ W V + + ++ I L+EDV++C +DVQ+++ IL +E Sbjct: 4 WRKKVVFPARRAWAAVSTRVRARKPGSGGSILKLHEDVQTCGYKDVQVMFEILKSELEES 63 Query: 339 PPPTLRLKQ*LTDRPVPAAVRRSSTA 416 PT + K P + R SS A Sbjct: 64 RAPTKQRKPPAWRPPSAWSSRSSSIA 89
>AK108203:Os08g0241300 | Length = 91 Score = 35.4 bits (80), Expect = 0.049 Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 5/54 (9%) Frame = +3 Query: 180 GWLRSLMAPIKKLWI-----RVHSAQKKKRGIYILYEDVKSCPCEDVQILWSIL 326 GW + + ++ W R+ + ++ RG+ L+EDV++C +DVQ+++ +L Sbjct: 3 GWRKKVAFRARRAWAALVSGRLRARKQGSRGLLKLHEDVQTCDYKDVQVMFEML 56
>AK066494:Os03g0206400 | Length = 91 Score = 35.4 bits (80), Expect = 0.049 Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = +3 Query: 183 WLRSLMAPIKKLWIRVHSA-QKKKRGIYILYEDVKSCPCEDVQILWSIL 326 W ++ P+++ W+ V + ++ G++ L ++V +C EDV+++W +L Sbjct: 4 WWDRVVLPVRRAWLGVAARFGVRQTGLWRLRQEVSTCEYEDVRVMWEML 52
>AK068990:Os01g0140100 | Length = 504 Score = 32.0 bits (71), Expect = 0.55 Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 9/127 (7%) Frame = -1 Query: 807 IQPPLLYPLLCIFIYGVQD------KYRHARPLTRTTNRALHVTLTFFQKGXXXXXXXKL 646 +QPP+L PLL + + RHA P T + +L+ + Sbjct: 1 MQPPILLPLLLLLLLLAAASPRPVLSRRHASPPLATETLDVAASLSRARAAVSAEAVPLH 60 Query: 645 KNLAS--QDRSVGEGHMRARGELTGHARHF-RGSQGRDRGNTYYSFYHL*SLCTLHRQSA 475 ++ A+ VGE H R L H+R F QGR R +Y S L L R SA Sbjct: 61 QSAAAAVSTEVVGEEHEEGRLALRLHSRDFLPEEQGRQRHASYRSLV----LARLRRDSA 116 Query: 474 EACGLGS 454 A + + Sbjct: 117 RAAAVSA 123
>AK120814:Os05g0138000 | Length = 119 Score = 31.6 bits (70), Expect = 0.71 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +3 Query: 267 LYEDVKSCPCEDVQILWSIL 326 LY DV +C EDVQ++WS+L Sbjct: 85 LYGDVMACAYEDVQVMWSML 104
>AK119848: | Length = 555 Score = 31.2 bits (69), Expect = 0.93 Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 1/100 (1%) Frame = -2 Query: 629 RIAVSVKDTCEREGSSPAMHAISVAHKGETEGTPTTLSIIFNLYVHYTDSLPKHVGWARI 450 R A K + SPA A A K ++G D P Sbjct: 450 RSASPAKPAARSDSRSPARSASPAADKDRSKGR---------------DRSPA------A 488 Query: 449 GCRREAVGTSERRA-RSTDGGRDRPVGQSLLQPQRRRRVG 333 G +R G+ ERRA R+ GRDR +S Q QRR R G Sbjct: 489 GGKRGRAGSEERRADRAAASGRDRSRSRSPEQRQRRERRG 528
>AK108206:Os07g0115500 | Length = 94 Score = 31.2 bits (69), Expect = 0.93 Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Frame = +3 Query: 204 PIKKLWIRVHSAQKKKR--GIYILYEDVKSCPCEDVQILWSIL--VESHPPP 347 P+K++W+ + + +R G+ L +V++C DV ++W +L +++ PP Sbjct: 11 PVKRVWLGLSARLGLRRTTGLGKLRNEVRTCEYSDVHVMWEMLSSMDAAAPP 62
>AK112065:Os08g0285200 | Length = 488 Score = 30.4 bits (67), Expect = 1.6 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +3 Query: 318 SILVESHPPPTLRLKQ*LTDRPVPAAVRRSSTALRRTDGF--PAATDPSPAHMLRQT 482 S +++ PPT + + R PA VRRS RT G P A+ P+PA R T Sbjct: 82 SAIIQLSRPPTKKQQPRARPRAAPAVVRRS----LRTQGLPPPPASGPAPAPPRRST 134
>AK100927:Os07g0446100 | Length = 513 Score = 29.3 bits (64), Expect = 3.5 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 21/124 (16%) Frame = +3 Query: 24 LHSASKR-----LHLFPLTSPRPTPTQDSLALLFHLPADQCRSTSSRGRELRVSSFMGWL 188 LH A+K+ +HL P T D L ++ R E R+S F GW+ Sbjct: 80 LHHAAKKGLEQTVHLLLSHGANPFITNDDCHTALDLAREKGHVNVVRAIEGRISLFCGWM 139 Query: 189 RSLMAP-----------IKKLW--IRVHSAQKKKRGIYI---LYEDVKSCPCEDVQILWS 320 R P +K+W I A+ + R + + +Y ++++ + V LW Sbjct: 140 RENYGPGFLEAFAPQFLTRKIWAVILPREARNQTRPLKLELTIYPELQASKPQAVIKLWK 199 Query: 321 ILVE 332 +E Sbjct: 200 CQLE 203
>AK109930: | Length = 138 Score = 28.9 bits (63), Expect = 4.6 Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = -2 Query: 431 VGTSERRARSTDGGRDRPVGQSLLQ-PQRRR---RVGLDED*PEDLHV 300 VG S R+RS RP Q L Q P RRR R L P DLH+ Sbjct: 2 VGRSRSRSRSRPSAPARPASQRLSQRPVRRRHRTRNALRTQQPRDLHL 49
>AK063489:Os01g0357400 | Length = 348 Score = 28.9 bits (63), Expect = 4.6 Identities = 25/88 (28%), Positives = 28/88 (31%), Gaps = 1/88 (1%) Frame = -2 Query: 632 HRIAVSVKDTCEREGSSPAMHAISVAHKGETEGTPTTLSIIFNLYVHYTDSLPKHVG-WA 456 HR S T GSS A S T G T+ + T P W Sbjct: 156 HRRRTSTTSTSASSGSSSAGSTGSRWTSASTRGASTSPRATPPTWQRSTSMPPSRASPWP 215 Query: 455 RIGCRREAVGTSERRARSTDGGRDRPVG 372 R G R GT+ R T GR G Sbjct: 216 RYGRRWRTAGTASRTTTRTRTGRSWSTG 243
>AY098743:Os03g0793700 | Length = 470 Score = 28.5 bits (62), Expect = 6.0 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -2 Query: 467 VGWARIGCRREAVGTSERRARSTDGGRDRPVGQSLLQPQRRRRVG 333 VGW+R G R E ERR +GGR +G+ + R R G Sbjct: 32 VGWSRRGEREEE---DERRRHGGEGGRPYHLGEESFRHWTRTRHG 73
>AK121667:Os03g0793700 | Length = 470 Score = 28.5 bits (62), Expect = 6.0 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -2 Query: 467 VGWARIGCRREAVGTSERRARSTDGGRDRPVGQSLLQPQRRRRVG 333 VGW+R G R E ERR +GGR +G+ + R R G Sbjct: 32 VGWSRRGEREEE---DERRRHGGEGGRPYHLGEESFRHWTRTRHG 73
>AK102839:Os07g0668200 | Length = 413 Score = 28.5 bits (62), Expect = 6.0 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 378 RPVPAAVRRSSTALRRTDGFPAATDPSPA 464 RP AA+ S L R DG P++ PSPA Sbjct: 25 RPGCAALAGSGALLPRLDGVPSSPSPSPA 53
>AK101682:Os07g0668200 | Length = 413 Score = 28.5 bits (62), Expect = 6.0 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 378 RPVPAAVRRSSTALRRTDGFPAATDPSPA 464 RP AA+ S L R DG P++ PSPA Sbjct: 25 RPGCAALAGSGALLPRLDGVPSSPSPSPA 53
>AK059051:Os07g0668200 | Length = 413 Score = 28.5 bits (62), Expect = 6.0 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 378 RPVPAAVRRSSTALRRTDGFPAATDPSPA 464 RP AA+ S L R DG P++ PSPA Sbjct: 25 RPGCAALAGSGALLPRLDGVPSSPSPSPA 53
>Os02g0720400:Os02g0720400 | Length = 308 Score = 28.1 bits (61), Expect = 7.9 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = -3 Query: 481 VCRSMWAGLGSVAAGKPSVRRSAVLDRRTAAGTGRSVNHCFSRSVGGGWDSTR 323 VCRS W GSV AG V A+ TGR + +V G ++ R Sbjct: 139 VCRSSWERTGSVPAGS----HEYVDVTAAASATGRRARYIVEVNVAGEFEIAR 187
>AK107011:Os03g0206400 | Length = 96 Score = 28.1 bits (61), Expect = 7.9 Identities = 9/24 (37%), Positives = 18/24 (75%) Frame = +3 Query: 255 GIYILYEDVKSCPCEDVQILWSIL 326 G++ L ++V +C EDV+++W +L Sbjct: 34 GLWRLRQEVSTCEYEDVRVMWEML 57
>AK063135:Os01g0288200 | Length = 80 Score = 28.1 bits (61), Expect = 7.9 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 17/65 (26%) Frame = +3 Query: 183 WLRSLMAPIKKLW-IRVHS-----AQKKKRGIYI-----------LYEDVKSCPCEDVQI 311 W+R++ +P +K++ + H Q+ G+ + L+ +V +C EDVQ+ Sbjct: 5 WVRTITSPFRKVFGAQPHKDGGKRPQQPNSGMMVQHVVVDAERSKLHGEVMACAYEDVQV 64 Query: 312 LWSIL 326 +W +L Sbjct: 65 MWDML 69
>AK072462:Os08g0508700 | Length = 619 Score = 28.1 bits (61), Expect = 7.9 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +1 Query: 532 VPSVSPL*ATEMACMAGELPSRSHVSFTDT 621 +P++S + TEM MA ++ S SHV+ T+T Sbjct: 411 LPNMSRINQTEMMGMANQMTSLSHVNTTET 440
>AK099773:Os04g0122000 | Length = 577 Score = 25.8 bits (55), Expect(2) = 9.4 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = -3 Query: 562 PWLTRERPREHLLLFLSSLIFMYTTPT--VCRS 470 PW +R R L LSSL+ + T T +CRS Sbjct: 8 PWWSRRRTAPTLSTTLSSLLLLLATTTTKLCRS 40 Score = 20.4 bits (41), Expect(2) = 9.4 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -1 Query: 429 RYVGAPCSIDGRRQ 388 R+ G CS+ GRR+ Sbjct: 77 RWEGVTCSVAGRRR 90
>AK065510:Os04g0122000 | Length = 577 Score = 25.8 bits (55), Expect(2) = 9.4 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = -3 Query: 562 PWLTRERPREHLLLFLSSLIFMYTTPT--VCRS 470 PW +R R L LSSL+ + T T +CRS Sbjct: 8 PWWSRRRTAPTLSTTLSSLLLLLATTTTKLCRS 40 Score = 20.4 bits (41), Expect(2) = 9.4 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -1 Query: 429 RYVGAPCSIDGRRQ 388 R+ G CS+ GRR+ Sbjct: 77 RWEGVTCSVAGRRR 90 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,156,608 Number of extensions: 597287 Number of successful extensions: 2099 Number of sequences better than 10.0: 27 Number of HSP's gapped: 2098 Number of HSP's successfully gapped: 29 Length of query: 279 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 180 Effective length of database: 11,435,796 Effective search space: 2058443280 Effective search space used: 2058443280 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
